AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0449500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0449500 MtrunA17_Chr3g0093041 95.402 609 26 1 350 956 1 609 0.0 1211
Msa0449500 MtrunA17_Chr3g0132711 80.844 616 106 4 349 956 14 625 0.0 1031
Msa0449500 MtrunA17_Chr3g0093051 91.691 349 29 0 1 349 1 349 0.0 622
Msa0449500 MtrunA17_Chr3g0132721 76.218 349 83 0 1 349 1 349 1.08e-176 516
Msa0449500 MtrunA17_Chr4g0060401 32.405 682 381 19 194 852 302 926 1.12e-85 295
Msa0449500 MtrunA17_Chr3g0093091 31.886 668 403 18 194 852 309 933 2.70e-85 294
Msa0449500 MtrunA17_Chr4g0060431 32.412 651 386 15 207 847 302 908 2.81e-84 291
Msa0449500 MtrunA17_Chr4g0060501 31.659 657 393 17 207 852 317 928 1.43e-83 289
Msa0449500 MtrunA17_Chr7g0257341 28.284 944 503 30 9 848 5 878 2.16e-78 280
Msa0449500 MtrunA17_Chr7g0257341 31.931 523 304 16 244 751 1203 1688 1.12e-56 214
Msa0449500 MtrunA17_Chr4g0060421 34.420 491 269 13 370 852 3 448 5.01e-72 245
Msa0449500 MtrunA17_Chr4g0060471 40.667 300 152 6 558 851 1 280 3.05e-64 218
Msa0449500 MtrunA17_Chr3g0130331 30.857 175 106 5 554 717 70 240 1.72e-18 90.5
Msa0449500 MtrunA17_Chr1g0202431 28.507 221 149 5 533 748 41 257 6.98e-18 88.6
Msa0449500 MtrunA17_Chr8g0384391 30.270 185 117 4 541 717 55 235 2.45e-16 84.0
Msa0449500 MtrunA17_Chr4g0041871 31.016 187 117 7 558 737 376 557 5.61e-15 80.1
Msa0449500 MtrunA17_Chr8g0393191 28.800 250 157 8 527 764 58 298 8.17e-15 79.3
Msa0449500 MtrunA17_Chr1g0200651 28.283 198 129 5 554 741 102 296 2.28e-14 77.4
Msa0449500 MtrunA17_Chr4g0065231 25.155 322 211 11 520 829 57 360 7.78e-14 75.9
Msa0449500 MtrunA17_Chr4g0039261 26.904 197 125 6 553 736 62 252 9.99e-14 75.5
Msa0449500 MtrunA17_Chr1g0198931 25.556 270 180 8 527 780 92 356 1.59e-13 74.7
Msa0449500 MtrunA17_Chr4g0050261 30.000 190 112 5 543 717 74 257 1.82e-13 74.7
Msa0449500 MtrunA17_Chr4g0050221 28.986 207 125 6 553 743 42 242 2.15e-13 74.3
Msa0449500 MtrunA17_Chr2g0318061 24.768 323 175 13 505 798 18 301 2.39e-13 72.8
Msa0449500 MtrunA17_Chr5g0411621 29.208 202 128 6 552 742 61 258 2.46e-13 74.3
Msa0449500 MtrunA17_Chr1g0178481 25.000 204 143 5 541 737 395 595 2.52e-13 73.9
Msa0449500 MtrunA17_Chr4g0050291 27.189 217 137 5 516 717 24 234 3.20e-13 73.9
Msa0449500 MtrunA17_Chr1g0199471 27.586 232 148 7 541 758 516 741 3.57e-13 73.9
Msa0449500 MtrunA17_Chr7g0264441 29.630 162 100 4 541 692 278 435 5.68e-13 73.2
Msa0449500 MtrunA17_Chr3g0102731 29.730 185 115 6 543 717 99 278 7.83e-13 72.4
Msa0449500 MtrunA17_Chr1g0180971 31.056 161 99 4 541 692 412 569 1.28e-12 72.0
Msa0449500 MtrunA17_Chr5g0408061 28.125 192 124 5 554 735 77 264 1.80e-12 71.2
Msa0449500 MtrunA17_Chr8g0359931 29.143 175 107 5 554 717 78 246 1.99e-12 71.2
Msa0449500 MtrunA17_Chr4g0050251 30.000 190 112 6 543 717 74 257 4.03e-12 70.5
Msa0449500 MtrunA17_Chr2g0316301 27.941 204 126 8 560 746 91 290 4.74e-12 70.1
Msa0449500 MtrunA17_Chr4g0039251 25.510 196 127 6 554 736 105 294 5.04e-12 70.1
Msa0449500 MtrunA17_Chr5g0446901 29.032 186 119 5 543 717 110 293 5.70e-12 69.7
Msa0449500 MtrunA17_Chr4g0028621 32.298 161 89 5 541 688 506 659 8.99e-12 69.3
Msa0449500 MtrunA17_Chr6g0477811 27.500 200 126 6 557 743 81 274 1.64e-11 68.2
Msa0449500 MtrunA17_Chr1g0213091 27.619 210 136 6 554 751 134 339 2.05e-11 68.2
Msa0449500 MtrunA17_Chr1g0176451 26.857 175 113 5 554 717 35 205 3.38e-11 67.0
Msa0449500 MtrunA17_Chr4g0060411 32.484 157 102 4 194 347 293 448 3.70e-11 66.6
Msa0449500 MtrunA17_Chr1g0176441 25.359 209 141 6 553 750 182 386 3.99e-11 67.0
Msa0449500 MtrunA17_Chr1g0156821 25.616 203 141 5 556 752 1025 1223 4.56e-11 67.4
Msa0449500 MtrunA17_Chr7g0262221 29.119 261 152 13 543 780 855 1105 5.47e-11 67.0
Msa0449500 MtrunA17_Chr7g0263351 27.143 210 135 7 554 750 139 343 7.82e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0449500 AT3G47730.1 66.077 961 305 6 1 947 3 956 0.0 1326
Msa0449500 AT5G61690.2 63.087 959 332 8 1 946 3 952 0.0 1217
Msa0449500 AT5G61690.1 62.565 959 336 9 1 946 3 951 0.0 1202
Msa0449500 AT5G61730.2 62.839 958 329 8 1 946 3 945 0.0 1194
Msa0449500 AT5G61730.1 62.004 958 327 9 1 946 3 935 0.0 1169
Msa0449500 AT5G61700.1 30.804 659 388 17 207 852 308 911 4.55e-88 302
Msa0449500 AT3G47790.1 30.075 798 474 23 79 851 163 901 4.57e-83 288
Msa0449500 AT3G47780.1 30.606 660 391 15 207 852 323 929 1.53e-82 287
Msa0449500 AT5G61740.3 30.534 655 390 14 207 852 166 764 5.31e-82 282
Msa0449500 AT5G61740.2 30.534 655 390 14 207 852 271 869 3.77e-81 282
Msa0449500 AT5G61740.1 30.534 655 390 14 207 852 305 903 6.18e-81 282
Msa0449500 AT3G47750.1 30.712 674 398 16 194 852 312 931 1.62e-79 278
Msa0449500 AT3G47740.1 30.090 668 381 17 207 852 323 926 1.91e-77 272
Msa0449500 AT2G41700.1 34.665 626 343 18 242 848 295 873 5.53e-77 276
Msa0449500 AT2G41700.1 33.207 527 292 16 245 751 1197 1683 3.10e-63 234
Msa0449500 AT3G47760.3 30.480 666 384 19 207 852 324 930 1.12e-76 270
Msa0449500 AT3G47770.1 30.075 665 382 16 207 849 294 897 1.61e-76 269
Msa0449500 AT3G47770.2 30.075 665 382 16 207 849 320 923 1.97e-76 270
Msa0449500 AT3G47760.1 29.880 666 382 19 207 852 290 890 2.18e-75 266
Msa0449500 AT2G41700.2 34.159 565 311 15 297 848 277 793 7.09e-70 255
Msa0449500 AT2G41700.2 31.028 564 313 16 245 762 1119 1652 4.39e-59 222
Msa0449500 AT3G47760.2 30.285 667 354 23 207 852 324 900 8.62e-69 247
Msa0449500 AT5G61700.2 30.443 519 315 13 207 716 308 789 2.01e-65 236
Msa0449500 AT5G61700.4 30.443 519 315 13 207 716 308 789 2.01e-65 236
Msa0449500 AT3G47790.2 29.412 663 400 20 79 717 44 662 3.53e-62 224
Msa0449500 AT3G47790.3 29.412 663 400 20 79 717 163 781 1.62e-61 224
Msa0449500 AT5G61700.3 25.624 441 284 12 207 640 308 711 3.32e-36 147
Msa0449500 AT3G47770.3 23.585 424 259 11 207 611 320 697 3.37e-20 96.7
Msa0449500 AT4G25750.1 33.679 193 113 8 553 737 41 226 1.13e-18 91.3
Msa0449500 AT2G13610.1 33.511 188 107 8 541 717 61 241 1.73e-18 91.3
Msa0449500 AT5G52860.1 29.703 202 132 6 539 735 41 237 8.50e-17 85.5
Msa0449500 AT3G13220.1 24.828 290 184 8 541 800 105 390 4.08e-15 80.5
Msa0449500 AT1G65410.1 28.182 220 132 7 541 737 98 314 1.71e-14 76.6
Msa0449500 AT1G53270.1 29.293 198 115 8 554 735 62 250 2.07e-14 77.8
Msa0449500 AT4G27420.1 28.856 201 127 7 529 717 53 249 5.64e-14 76.6
Msa0449500 AT2G37010.2 28.571 217 139 6 541 745 499 711 5.93e-14 77.0
Msa0449500 AT2G37010.1 28.571 217 139 6 541 745 499 711 5.93e-14 77.0
Msa0449500 AT1G51500.1 25.957 235 143 8 553 770 55 275 1.11e-13 75.9
Msa0449500 AT1G51460.1 29.444 180 103 6 553 717 41 211 1.67e-13 75.1
Msa0449500 AT3G21090.1 25.888 197 127 6 553 736 56 246 2.05e-13 75.1
Msa0449500 AT1G67940.1 24.121 199 142 6 543 737 45 238 3.87e-13 71.2
Msa0449500 AT5G06530.3 27.830 212 138 6 543 743 180 387 8.31e-13 72.8
Msa0449500 AT5G06530.2 27.830 212 138 6 543 743 180 387 8.67e-13 73.2
Msa0449500 AT5G06530.1 27.830 212 138 6 543 743 180 387 8.67e-13 73.2
Msa0449500 AT1G31770.1 25.600 250 164 7 553 784 92 337 1.28e-12 72.4
Msa0449500 AT1G17840.1 27.064 218 136 7 541 743 68 277 1.95e-12 71.6
Msa0449500 AT3G55110.1 31.280 211 130 7 554 752 103 310 2.10e-12 71.6
Msa0449500 AT5G06530.4 29.082 196 124 6 559 743 1 192 4.16e-12 70.1
Msa0449500 AT4G15236.1 28.652 178 114 5 550 717 825 999 5.88e-12 70.5
Msa0449500 AT5G60740.1 30.128 156 99 3 541 688 514 667 6.39e-12 70.5
Msa0449500 AT1G27940.2 24.074 216 144 6 544 748 809 1015 9.36e-12 69.7
Msa0449500 AT1G27940.2 23.485 264 169 7 500 751 143 385 1.49e-11 69.3
Msa0449500 AT1G27940.1 24.074 216 144 6 544 748 1023 1229 1.20e-11 69.7
Msa0449500 AT1G27940.1 23.485 264 169 7 500 751 357 599 1.56e-11 69.3
Msa0449500 AT4G15233.2 28.652 178 114 5 550 717 827 1001 1.30e-11 69.7
Msa0449500 AT4G15233.7 28.652 178 114 5 550 717 809 983 1.31e-11 69.3
Msa0449500 AT4G15233.8 28.652 178 114 5 550 717 818 992 1.35e-11 69.3
Msa0449500 AT4G15233.1 28.652 178 114 5 550 717 827 1001 1.37e-11 69.3
Msa0449500 AT5G19410.1 24.757 206 136 7 553 742 77 279 1.50e-11 68.9
Msa0449500 AT4G15233.5 28.652 178 114 5 550 717 684 858 1.50e-11 69.3
Msa0449500 AT4G15233.4 28.652 178 114 5 550 717 684 858 1.50e-11 69.3
Msa0449500 AT5G19410.2 24.757 206 136 7 553 742 86 288 1.51e-11 68.9
Msa0449500 AT4G15233.3 28.652 178 114 5 550 717 765 939 1.54e-11 69.3
Msa0449500 AT4G15233.6 28.652 178 114 5 550 717 765 939 1.54e-11 69.3
Msa0449500 AT1G53390.1 28.824 170 108 4 558 717 539 705 1.57e-11 69.3
Msa0449500 AT3G25620.2 27.149 221 144 7 554 762 111 326 1.88e-11 68.6
Msa0449500 AT3G25620.1 27.149 221 144 7 554 762 111 326 2.17e-11 67.8
Msa0449500 AT3G55130.1 29.412 204 117 8 551 736 108 302 2.23e-11 68.6
Msa0449500 AT3G55100.1 27.136 199 127 7 552 737 61 254 2.69e-11 68.2
Msa0449500 AT3G55100.2 27.136 199 127 7 552 737 61 254 2.69e-11 68.2
Msa0449500 AT1G28010.1 24.215 223 151 5 539 751 386 600 2.93e-11 68.2
Msa0449500 AT2G37360.1 25.911 247 151 8 527 750 112 349 5.28e-11 67.4
Msa0449500 AT2G37280.4 29.444 180 110 6 550 717 690 864 7.61e-11 67.0
Msa0449500 AT2G26910.1 31.863 204 111 10 550 735 853 1046 7.72e-11 67.0
Msa0449500 AT2G37280.3 29.444 180 110 6 550 717 877 1051 8.65e-11 67.0
Msa0449500 AT2G37280.1 29.444 180 110 6 550 717 848 1022 9.29e-11 66.6

Find 227 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTACAGCATTGATTTA+TGG 0.123489 3_3:+33491847 Msa0449500:intron
TTCATCCAAAATGACTAATT+TGG 0.137012 3_3:-33492516 None:intergenic
ACTTTCTAAATCCTCGTTAT+TGG 0.150098 3_3:+33490728 Msa0449500:CDS
TTTGAGGAATATGAGCTTTC+TGG 0.153807 3_3:-33494426 None:intergenic
TGACCCCAAATTAGTCATTT+TGG 0.172803 3_3:+33492511 Msa0449500:CDS
TGATTCATGCTCAGTGATTT+TGG 0.177760 3_3:+33494547 Msa0449500:exon
TACCCCGGTATATTTAAATT+TGG 0.202872 3_3:+33491038 Msa0449500:CDS
TCAAACATTCGAAAGATTAT+TGG 0.207745 3_3:+33491898 Msa0449500:CDS
TATTCTCACAACACATTCTA+TGG 0.213101 3_3:+33492712 Msa0449500:CDS
CACACATGCCTCCTTGTTAT+TGG 0.221179 3_3:-33492653 None:intergenic
GAACTCTTCTCTAGAATTAA+AGG 0.224002 3_3:+33492264 Msa0449500:CDS
CCTTTACAGCATTGATTTAT+GGG 0.249063 3_3:+33491848 Msa0449500:intron
GAAATCGCTAGGTTTCTTAT+TGG 0.252209 3_3:+33487570 Msa0449500:CDS
TCTCTTCTCTTAGTTCTTAC+TGG 0.267894 3_3:+33489801 Msa0449500:CDS
AAGTTATTGTTCTCCTCTTT+TGG 0.268745 3_3:-33493039 None:intergenic
TCATCCAAAATGACTAATTT+GGG 0.271209 3_3:-33492515 None:intergenic
CTGGTCATTACCGAGATTTA+TGG 0.288621 3_3:+33490255 Msa0449500:CDS
CTGTCTGAACTAACTTGATT+TGG 0.302323 3_3:-33494517 None:intergenic
CAAGATAGAAAAGAAGAATT+TGG 0.305480 3_3:+33493644 Msa0449500:CDS
TCCTCACAAGGTTTGATTGA+TGG 0.314934 3_3:-33487216 None:intergenic
TTCCTCACACCCATTTCATT+TGG 0.315266 3_3:-33490694 None:intergenic
TGATATTTATATACGGCTTC+TGG 0.316760 3_3:+33490621 Msa0449500:CDS
TGATGCAAATGTTGCTGTTC+AGG 0.321996 3_3:+33490995 Msa0449500:CDS
GACAGAATGATATTTATATA+CGG 0.323292 3_3:+33490614 Msa0449500:intron
ATGGAAGTATTATTAGTTAT+GGG 0.329578 3_3:+33487454 Msa0449500:CDS
CAATATAATCCCAAATGAAA+TGG 0.332938 3_3:+33490684 Msa0449500:CDS
ACCGGTACCCTTTGTATTGC+CGG 0.337280 3_3:+33494397 Msa0449500:CDS
TTCTCTACAGTTGGATCAAT+GGG 0.340505 3_3:+33489150 Msa0449500:CDS
AACACATTCCACTTGAAGTC+TGG 0.343527 3_3:-33489093 None:intergenic
CATGAGGAATCACATAAGTT+AGG 0.343839 3_3:-33493062 None:intergenic
AATGGAAGTATTATTAGTTA+TGG 0.344238 3_3:+33487453 Msa0449500:CDS
TCACCATGTTGAGTTCAAAT+AGG 0.347909 3_3:-33489887 None:intergenic
GATGCTGTGTCATCATTTGC+AGG 0.348649 3_3:-33492878 None:intergenic
TGCCGTGTTATGATTTCGTT+TGG 0.352870 3_3:+33487256 Msa0449500:CDS
TCCTCACACCCATTTCATTT+GGG 0.358716 3_3:-33490693 None:intergenic
AGCATTGATTTATGGGAATT+CGG 0.359317 3_3:+33491855 Msa0449500:intron
TTGAGGAATATGAGCTTTCT+GGG 0.364777 3_3:-33494425 None:intergenic
AGTGTTGCAATTGCACTTAT+CGG 0.365108 3_3:+33492488 Msa0449500:CDS
GCTATGTATGTGGGATTTCC+AGG 0.365207 3_3:+33494313 Msa0449500:CDS
ATCAGATTGAAGTCACGTTT+TGG 0.380754 3_3:+33492806 Msa0449500:CDS
CAGCTAACCCCGTTATCTTC+AGG 0.381965 3_3:-33490341 None:intergenic
CTTTGTCTATGGCGAAGATT+AGG 0.382631 3_3:-33487125 None:intergenic
CGTTCTTCAGATAAGTTCAT+TGG 0.383758 3_3:+33489209 Msa0449500:CDS
CGCCGGTCAGGGTCAGTTCA+TGG 0.391054 3_3:+33494481 Msa0449500:CDS
TTTCTGAACACTAGTAGAAT+TGG 0.394546 3_3:-33487484 None:intergenic
AAATTACTTTCAGGGCTTGT+GGG 0.395875 3_3:+33491586 Msa0449500:intron
CCTTTGCCATGATTCCTATA+CGG 0.397849 3_3:-33492757 None:intergenic
TCAAGGACGTCTTCATCATC+TGG 0.400264 3_3:-33490930 None:intergenic
TCACCATCTCCATCAGTTAC+TGG 0.400609 3_3:-33491698 None:intergenic
TATGTCGAGATGGAAGAATT+TGG 0.401224 3_3:+33494686 Msa0449500:three_prime_UTR
TTTCAACTCCTGAAGATAAC+GGG 0.402720 3_3:+33490333 Msa0449500:CDS
TTTATTACTAATATTAGCTT+TGG 0.402740 3_3:+33492836 Msa0449500:CDS
GTAACTTCCAGCTCTTACTT+TGG 0.403285 3_3:-33492441 None:intergenic
GTAGAGAAAGGAGCCATTCC+TGG 0.403530 3_3:-33489135 None:intergenic
CAAATTACTTTCAGGGCTTG+TGG 0.404244 3_3:+33491585 Msa0449500:intron
ATCTACAGTTTGATATCCTA+TGG 0.404903 3_3:+33492214 Msa0449500:intron
TTTCTCTACAGTTGGATCAA+TGG 0.405765 3_3:+33489149 Msa0449500:CDS
TTGGTGAGAGGAGTTGAAGA+AGG 0.406104 3_3:-33487089 None:intergenic
CACACAGTCATCGTCGTTAA+CGG 0.408573 3_3:-33490384 None:intergenic
ACTGCAAGACAACGCCGGTC+AGG 0.409291 3_3:+33494469 Msa0449500:CDS
AGTTTCGTACGATTGTTGAT+AGG 0.409352 3_3:+33487298 Msa0449500:CDS
GATTATATTGTCAAAGTAGA+TGG 0.409408 3_3:-33490671 None:intergenic
ATCCTATGGGAGGCTTTGTC+TGG 0.412790 3_3:+33492228 Msa0449500:CDS
TTTCTTGAATATTGCAAAGC+AGG 0.416432 3_3:+33493709 Msa0449500:CDS
ATTCTTATTTCTTAGACTAC+TGG 0.420871 3_3:+33492623 Msa0449500:intron
CTAAATCCTCGTTATTGGAC+AGG 0.423781 3_3:+33490733 Msa0449500:CDS
GGCTTCTCCGTATTTATTGT+CGG 0.424578 3_3:+33490081 Msa0449500:CDS
TGCTCCTTACCACGCTGTTA+AGG 0.432338 3_3:+33491085 Msa0449500:CDS
ATGGAAGAATTTGGAGGGGA+AGG 0.434696 3_3:+33494695 Msa0449500:three_prime_UTR
GCAACCAAATTTAAATATAC+CGG 0.438025 3_3:-33491042 None:intergenic
AACTCTTCTCTAGAATTAAA+GGG 0.440828 3_3:+33492265 Msa0449500:CDS
TTTCATTCGTAAATCATCTT+CGG 0.441394 3_3:+33490047 Msa0449500:CDS
ACACTCAGGCCTTGAGCAAA+AGG 0.441420 3_3:-33490296 None:intergenic
CTGAAGATAACGGGGTTAGC+TGG 0.442106 3_3:+33490342 Msa0449500:CDS
TCAACAATCGTACGAAACTT+TGG 0.444919 3_3:-33487294 None:intergenic
AGAGAGAGAAGAGGTGAGGA+AGG 0.446399 3_3:-33486928 None:intergenic
ATTAGGAAAATGAAGAAGAT+TGG 0.447583 3_3:-33487108 None:intergenic
GGCTTTACGACTCTGCATAC+TGG 0.448998 3_3:+33489736 Msa0449500:CDS
GTGACTTTGACCTTGACATC+TGG 0.451578 3_3:+33493767 Msa0449500:CDS
AGGCCTTGAGCAAAAGGATT+AGG 0.453113 3_3:-33490290 None:intergenic
TGGAAGAATTTGGAGGGGAA+GGG 0.453395 3_3:+33494696 Msa0449500:three_prime_UTR
ACTGGTTATCATGGCTAACC+TGG 0.456830 3_3:+33489754 Msa0449500:CDS
CGCTCCGCAGCAAGCTGAAG+AGG 0.457165 3_3:-33487546 None:intergenic
ATCGCTAGGTTTCTTATTGG+AGG 0.460474 3_3:+33487573 Msa0449500:CDS
TAGAGAAATACCTGTTGAAA+AGG 0.463474 3_3:+33487341 Msa0449500:CDS
AATATAATCCCAAATGAAAT+GGG 0.463808 3_3:+33490685 Msa0449500:CDS
AAGGGAAAGCTGCGCTGCAT+TGG 0.464105 3_3:+33492776 Msa0449500:CDS
CTTTCGAATGTTTGACATGC+CGG 0.464463 3_3:-33491890 None:intergenic
TATTTCTTAGACTACTGGTA+TGG 0.468191 3_3:+33492628 Msa0449500:intron
TTTAGATGTAGTACCAAAAG+AGG 0.471690 3_3:+33493026 Msa0449500:CDS
TTGACATGCCGGTAGAGCTT+CGG 0.474734 3_3:-33491879 None:intergenic
ACAGCTATTAGTTGTTTGAC+AGG 0.479657 3_3:+33491668 Msa0449500:CDS
CTAGAAAGTGCTGCAGCTGA+AGG 0.480749 3_3:+33493737 Msa0449500:CDS
TATTCAGTAGACTCTGATCC+TGG 0.491964 3_3:-33494331 None:intergenic
GGATAGGCAATGACCGTGAT+GGG 0.492293 3_3:+33489714 Msa0449500:intron
CAAGGTTTGATTGATGGAGA+TGG 0.493575 3_3:-33487210 None:intergenic
AAGAATTTGGAGGGGAAGGG+AGG 0.496014 3_3:+33494699 Msa0449500:three_prime_UTR
GGCATATCTGACATCCAGCT+TGG 0.499913 3_3:+33493665 Msa0449500:CDS
TTGCAGTAGCAGATGGTAGT+TGG 0.501869 3_3:-33494453 None:intergenic
AATTCGGTCCGAAGCTCTAC+CGG 0.502704 3_3:+33491871 Msa0449500:CDS
ATGAGCTTTCTGGGAGTGGC+CGG 0.502830 3_3:-33494416 None:intergenic
TTCTGGCCACGTTCTTTCTG+TGG 0.504319 3_3:+33490638 Msa0449500:CDS
ACACATTCCACTTGAAGTCT+GGG 0.505693 3_3:-33489092 None:intergenic
CATAAATCTCGGTAATGACC+AGG 0.507288 3_3:-33490254 None:intergenic
AAATGAAAGGAAATAGAGAA+TGG 0.507748 3_3:+33494588 Msa0449500:three_prime_UTR
TAATTCTAGAGAAGAGTTCG+AGG 0.508271 3_3:-33492260 None:intergenic
CAAGAGTTGTTAAACCAAGC+TGG 0.508293 3_3:-33493679 None:intergenic
CTGCGGAGCGTGAAATCGCT+AGG 0.509620 3_3:+33487559 Msa0449500:CDS
AATGTTGCTGTTCAGGTACA+AGG 0.509773 3_3:+33491002 Msa0449500:CDS
ATGGCTCCTTTCTCTACAGT+TGG 0.510714 3_3:+33489141 Msa0449500:CDS
AGGATAATTAAGAATAATCC+TGG 0.512597 3_3:+33487318 Msa0449500:CDS
TCGAGATGGAAGAATTTGGA+GGG 0.518629 3_3:+33494690 Msa0449500:three_prime_UTR
CAACCAAATTTAAATATACC+GGG 0.518875 3_3:-33491041 None:intergenic
GTAGATTACAGAAACATCAT+TGG 0.519025 3_3:+33492394 Msa0449500:intron
AAGCGACCGTATAGGAATCA+TGG 0.520598 3_3:+33492751 Msa0449500:CDS
ATTGATGGAGATGGAATCAA+TGG 0.521134 3_3:-33487201 None:intergenic
TATTGTCGGCTTCATGACTC+AGG 0.521620 3_3:+33490095 Msa0449500:CDS
CTCCATGAACTGACCCTGAC+CGG 0.524172 3_3:-33494483 None:intergenic
GAGTGTAACAACTGTTTCCC+AGG 0.524237 3_3:-33489772 None:intergenic
ATAAGAATGAAGTTGATGAT+TGG 0.525841 3_3:+33487379 Msa0449500:CDS
GACATTCTAAGCGACCGTAT+AGG 0.526286 3_3:+33492743 Msa0449500:CDS
CTATTAGGACCCAATGGAGC+GGG 0.528099 3_3:+33491638 Msa0449500:CDS
GTTTCAACTCCTGAAGATAA+CGG 0.529040 3_3:+33490332 Msa0449500:CDS
CTTCCTATTTGAACTCAACA+TGG 0.529346 3_3:+33489884 Msa0449500:CDS
GAAAGAGCTTAAACTTCGCC+AGG 0.529573 3_3:+33489239 Msa0449500:CDS
GAATATGAGCTTTCTGGGAG+TGG 0.529777 3_3:-33494420 None:intergenic
ACTCTGCATACTGGTTATCA+TGG 0.530073 3_3:+33489745 Msa0449500:CDS
AAGGAGCCATTCCTGGGTGC+GGG 0.532692 3_3:-33489128 None:intergenic
CGTATAGGAATCATGGCAAA+GGG 0.534824 3_3:+33492758 Msa0449500:CDS
GTGGACTAAACTCTTCATGC+CGG 0.539359 3_3:-33490908 None:intergenic
CATGAAGCCGACAATAAATA+CGG 0.542083 3_3:-33490088 None:intergenic
ATGTCAAGGTCAAAGTCACT+AGG 0.542916 3_3:-33493763 None:intergenic
CGTTGTCTTGCAGTAGCAGA+TGG 0.546260 3_3:-33494460 None:intergenic
CCCACATACATAGCTCCTAC+AGG 0.547082 3_3:-33494304 None:intergenic
AAAGGAGCCATTCCTGGGTG+CGG 0.547300 3_3:-33489129 None:intergenic
CAATAACAAGGAGGCATGTG+TGG 0.547456 3_3:+33492654 Msa0449500:CDS
GGCAACTGAAAATCAAAAGT+AGG 0.551167 3_3:-33487525 None:intergenic
CCTCGTTATTGGACAGGAGA+CGG 0.551929 3_3:+33490739 Msa0449500:CDS
AAGAATCCTATGCAATGTCC+TGG 0.553087 3_3:+33487408 Msa0449500:CDS
AGAATGTGTTGTGAGAATAA+TGG 0.556766 3_3:-33492708 None:intergenic
CTGCAAGACAACGCCGGTCA+GGG 0.558498 3_3:+33494470 Msa0449500:CDS
GGAATTCCCGCACCCAGGAA+TGG 0.559180 3_3:+33489122 Msa0449500:CDS
AGGGAGAGAGAGAAGAGGTG+AGG 0.559725 3_3:-33486932 None:intergenic
GGGAGTGGCCGGCAATACAA+AGG 0.562004 3_3:-33494405 None:intergenic
ACATTCCTTTCATAGAGGGT+GGG 0.562100 3_3:+33490862 Msa0449500:intron
ATTGATCCAACTGTAGAGAA+AGG 0.562560 3_3:-33489147 None:intergenic
TTTACCTTAACAGCGTGGTA+AGG 0.562656 3_3:-33491089 None:intergenic
GGGATAGGCAATGACCGTGA+TGG 0.562743 3_3:+33489713 Msa0449500:intron
GACATCTGGAGAGTCTGTCC+AGG 0.563696 3_3:+33493781 Msa0449500:CDS
GATGCAGCCAAAGTAAGAGC+TGG 0.564253 3_3:+33492434 Msa0449500:CDS
TCCTGTAGGAGCTATGTATG+TGG 0.564459 3_3:+33494303 Msa0449500:CDS
GCCGGCAATACAAAGGGTAC+CGG 0.564920 3_3:-33494398 None:intergenic
CAGAGAGGGAGAGAGAGAAG+AGG 0.565225 3_3:-33486937 None:intergenic
TGGACTAAACTCTTCATGCC+GGG 0.567053 3_3:-33490907 None:intergenic
GACAGACTCTCCAGATGTCA+AGG 0.568009 3_3:-33493777 None:intergenic
CCTGTAGGAGCTATGTATGT+GGG 0.570418 3_3:+33494304 Msa0449500:CDS
GTCGAGATGGAAGAATTTGG+AGG 0.570535 3_3:+33494689 Msa0449500:three_prime_UTR
TCAACAGGTATTTCTCTACC+AGG 0.570994 3_3:-33487336 None:intergenic
ATGAAGAATTTCTCCTCACA+AGG 0.572331 3_3:-33487228 None:intergenic
GAAACAATAACCATAAATCT+CGG 0.572683 3_3:-33490265 None:intergenic
TTGCAGATGGTATCAACAGT+AGG 0.574691 3_3:+33490215 Msa0449500:intron
ACTTCTACCATAAAACCTGT+GGG 0.576329 3_3:-33494355 None:intergenic
AAATGAAGAAGATTGGTGAG+AGG 0.576882 3_3:-33487101 None:intergenic
GATTATTGGAGTGTGTCCCC+AGG 0.579294 3_3:+33491912 Msa0449500:CDS
TACAGAAACATCATTGGCAG+AGG 0.580624 3_3:+33492400 Msa0449500:CDS
CAGCTATTAGTTGTTTGACA+GGG 0.580828 3_3:+33491669 Msa0449500:CDS
TAGAGAAAGGAGCCATTCCT+GGG 0.582798 3_3:-33489134 None:intergenic
CCGTATAGGAATCATGGCAA+AGG 0.583938 3_3:+33492757 Msa0449500:CDS
AATGAAAGCTGATAACAAGA+AGG 0.585623 3_3:-33490031 None:intergenic
TTCAAGGAATTCCCGCACCC+AGG 0.586408 3_3:+33489117 Msa0449500:CDS
GGAGTGGCCGGCAATACAAA+GGG 0.587849 3_3:-33494404 None:intergenic
CGAGATGGAAGAATTTGGAG+GGG 0.588801 3_3:+33494691 Msa0449500:three_prime_UTR
ATTAGCTTTGGAAACAACAA+TGG 0.592600 3_3:+33492848 Msa0449500:CDS
TACTTCTACCATAAAACCTG+TGG 0.593458 3_3:-33494356 None:intergenic
TCATCTTCGGCAACAACAGT+CGG 0.593670 3_3:+33490060 Msa0449500:CDS
CAGCCTTTGCAAGCACACTC+AGG 0.597155 3_3:-33490310 None:intergenic
GTAAGAGCTGGAAGTTACAG+TGG 0.600311 3_3:+33492446 Msa0449500:CDS
GTTGCCTCTTCAGCTTGCTG+CGG 0.600797 3_3:+33487542 Msa0449500:CDS
AGGCCTGAGTGTGCTTGCAA+AGG 0.601784 3_3:+33490307 Msa0449500:CDS
TAGAAAGTGCTGCAGCTGAA+GGG 0.602703 3_3:+33493738 Msa0449500:CDS
AGGACGTCTTCATCATCTGG+TGG 0.603910 3_3:-33490927 None:intergenic
GATGGAGATGGAATCAATGG+TGG 0.605880 3_3:-33487198 None:intergenic
TCCATCAATCAAACCTTGTG+AGG 0.609109 3_3:+33487215 Msa0449500:CDS
TCTACAGTTTGATATCCTAT+GGG 0.609822 3_3:+33492215 Msa0449500:intron
GGGATAACTCCAGTAACTGA+TGG 0.616241 3_3:+33491689 Msa0449500:CDS
TCCCAAATGAAATGGGTGTG+AGG 0.617777 3_3:+33490692 Msa0449500:CDS
TCACTAAAATGAATAGCACC+AGG 0.621112 3_3:-33487426 None:intergenic
ACAGTTTGATATCCTATGGG+AGG 0.622018 3_3:+33492218 Msa0449500:intron
ATGGAGATGGAATCAATGGT+GGG 0.627118 3_3:-33487197 None:intergenic
CTGGTTATCATGGCTAACCT+GGG 0.627124 3_3:+33489755 Msa0449500:CDS
ACTCCAGTAACTGATGGAGA+TGG 0.628421 3_3:+33491695 Msa0449500:CDS
CTGGTATGGATCCAATAACA+AGG 0.631438 3_3:+33492642 Msa0449500:CDS
TGTCAAGGTCAAAGTCACTA+GGG 0.633353 3_3:-33493762 None:intergenic
CCGTCTCCTGTCCAATAACG+AGG 0.638033 3_3:-33490739 None:intergenic
CAGATGGTATCAACAGTAGG+AGG 0.638084 3_3:+33490218 Msa0449500:intron
GACCAGACAAAGCCTCCCAT+AGG 0.638746 3_3:-33492230 None:intergenic
ATTGGCAGAGGTGAGACTCA+CGG 0.644251 3_3:+33492412 Msa0449500:CDS
TGGAATCGGATATGTCGAGA+TGG 0.644377 3_3:+33494676 Msa0449500:three_prime_UTR
TGTTATGATTTCGTTTGGAG+CGG 0.646175 3_3:+33487261 Msa0449500:CDS
GTGAAGCAGCAACAAACACA+AGG 0.646193 3_3:+33490966 Msa0449500:CDS
CGATGACTGTGTGCTGACAA+TGG 0.647516 3_3:+33490394 Msa0449500:CDS
AGAGCTGGAAGTTACAGTGG+AGG 0.650512 3_3:+33492449 Msa0449500:CDS
AATAACAAGGAGGCATGTGT+GGG 0.650686 3_3:+33492655 Msa0449500:CDS
AGCATCAGCAAGACATCGTG+AGG 0.651351 3_3:+33492895 Msa0449500:CDS
GGCATTGTGAAGACTTACCC+CGG 0.651356 3_3:+33491023 Msa0449500:CDS
CATCCAAAATGACTAATTTG+GGG 0.651859 3_3:-33492514 None:intergenic
CCTTGAGCAAAAGGATTAGG+CGG 0.654792 3_3:-33490287 None:intergenic
CTCCAAACGAAATCATAACA+CGG 0.656630 3_3:-33487258 None:intergenic
ATAGCACCAGGACATTGCAT+AGG 0.656866 3_3:-33487414 None:intergenic
GAGTCTACTGAATACCCCAC+AGG 0.659329 3_3:+33494340 Msa0449500:CDS
GTAGTTGCATATCTTCAACC+CGG 0.661373 3_3:+33490889 Msa0449500:CDS
ATAAATCTCGGTAATGACCA+GGG 0.666011 3_3:-33490253 None:intergenic
TCTATTAGGACCCAATGGAG+CGG 0.674018 3_3:+33491637 Msa0449500:CDS
CTGCTACTGCAAGACAACGC+CGG 0.674437 3_3:+33494464 Msa0449500:CDS
TCTACTAGTGTTCAGAAACG+TGG 0.679152 3_3:+33487489 Msa0449500:CDS
AACCAAATTTAAATATACCG+GGG 0.682377 3_3:-33491040 None:intergenic
TTCAACTCCTGAAGATAACG+GGG 0.682515 3_3:+33490334 Msa0449500:CDS
GATAGGCAATGACCGTGATG+GGG 0.683113 3_3:+33489715 Msa0449500:intron
AGAGTCGTAAAGCCCCATCA+CGG 0.695740 3_3:-33489727 None:intergenic
ACGTGACTTCAATCTGATCG+AGG 0.695850 3_3:-33492801 None:intergenic
AACGAACCACAGAAAGAACG+TGG 0.698760 3_3:-33490644 None:intergenic
CGTTATTGGACAGGAGACGG+AGG 0.708980 3_3:+33490742 Msa0449500:CDS
TACTGGGAACAAGATGACAC+CGG 0.712706 3_3:+33494379 Msa0449500:CDS
CTTCTACCATAAAACCTGTG+GGG 0.715948 3_3:-33494354 None:intergenic
GATGATTTACCTTAACAGCG+TGG 0.717695 3_3:-33491094 None:intergenic
GGGGTTAGCTGGAATACACG+AGG 0.756377 3_3:+33490353 Msa0449500:CDS
GTATGGATCCAATAACAAGG+AGG 0.783240 3_3:+33492645 Msa0449500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTAATTTTTAAT+TGG + chr3_3:33488867-33488886 Msa0449500:intron 0.0%
!!! CTTTATTTAAAATCAAAATA+TGG + chr3_3:33488276-33488295 Msa0449500:intron 10.0%
!!! AATAATAAAAGTTACAATTT+TGG + chr3_3:33488812-33488831 Msa0449500:intron 10.0%
!!! ATTATTTAATTTTTAATTGG+AGG + chr3_3:33488870-33488889 Msa0449500:intron 10.0%
!!! TAATTTTAATATTAGAAGTT+AGG + chr3_3:33491125-33491144 Msa0449500:intron 10.0%
!!! AATTTTAATATTAGAAGTTA+GGG + chr3_3:33491126-33491145 Msa0449500:intron 10.0%
!!! AGAATTGTTTTTTAAATAGA+CGG + chr3_3:33488206-33488225 Msa0449500:intron 15.0%
!! ATATTCTAAATTCTAATTGA+TGG + chr3_3:33489051-33489070 Msa0449500:intron 15.0%
!! TATATATCAACAATATCTAT+TGG - chr3_3:33489423-33489442 None:intergenic 15.0%
!!! GCAATAAAATTTTTCATTTT+CGG + chr3_3:33491237-33491256 Msa0449500:intron 15.0%
!! ATGTAAAATAATTTAACAGA+TGG - chr3_3:33491460-33491479 None:intergenic 15.0%
!! ATATATATATATCCAAATGT+TGG + chr3_3:33491794-33491813 Msa0449500:intron 15.0%
!! AGATTATAAAATTTGGTAAA+TGG - chr3_3:33492198-33492217 None:intergenic 15.0%
!! AAACTGTAGATTATAAAATT+TGG - chr3_3:33492205-33492224 None:intergenic 15.0%
!! TGAAATTATTAATAACCATT+AGG + chr3_3:33492356-33492375 Msa0449500:intron 15.0%
!! ATAATTGAAAATGCAAAAAA+AGG + chr3_3:33492680-33492699 Msa0449500:CDS 15.0%
!! TAATTGAAAATGCAAAAAAA+GGG + chr3_3:33492681-33492700 Msa0449500:CDS 15.0%
!!! TTTATTACTAATATTAGCTT+TGG + chr3_3:33492836-33492855 Msa0449500:CDS 15.0%
!!! AATTTGAGTTATTTAACTAT+AGG - chr3_3:33493268-33493287 None:intergenic 15.0%
!!! AAAAAATACAAAACCATTTT+AGG + chr3_3:33494178-33494197 Msa0449500:intron 15.0%
!!! AAAAATACAAAACCATTTTA+GGG + chr3_3:33494179-33494198 Msa0449500:intron 15.0%
!!! TCGCATTAATATTTTTTTTT+TGG + chr3_3:33494620-33494639 Msa0449500:three_prime_UTR 15.0%
!!! ATATTTTTTTTTTGGTTACA+AGG + chr3_3:33494628-33494647 Msa0449500:three_prime_UTR 15.0%
!! AAAAAAACATATTACTCTCA+TGG + chr3_3:33487049-33487068 Msa0449500:CDS 20.0%
!!! ATTCATTTTAGTGAAAAGAA+TGG + chr3_3:33487435-33487454 Msa0449500:CDS 20.0%
!!! AATGGAAGTATTATTAGTTA+TGG + chr3_3:33487453-33487472 Msa0449500:CDS 20.0%
!!! ATGGAAGTATTATTAGTTAT+GGG + chr3_3:33487454-33487473 Msa0449500:CDS 20.0%
!!! AAATCAAAATATGGGTTTTA+TGG + chr3_3:33488285-33488304 Msa0449500:intron 20.0%
!! AGAATTATGATCAAAATCAA+TGG + chr3_3:33488352-33488371 Msa0449500:intron 20.0%
!!! AAAATCTGGGTTTAAAATTT+TGG + chr3_3:33488598-33488617 Msa0449500:intron 20.0%
!!! TGGAACTACAATTTTAAAAT+TGG + chr3_3:33488757-33488776 Msa0449500:intron 20.0%
!! TTGTTGATATATAGAAAACA+AGG + chr3_3:33489430-33489449 Msa0449500:intron 20.0%
!!! CATATCAAGGTTTTAAATAA+AGG - chr3_3:33489572-33489591 None:intergenic 20.0%
!!! TTATTTTATCTATTTGCAGA+TGG + chr3_3:33490202-33490221 Msa0449500:intron 20.0%
!! TAGAACATATTCATCTAAAA+GGG - chr3_3:33490501-33490520 None:intergenic 20.0%
!! ATAGAACATATTCATCTAAA+AGG - chr3_3:33490502-33490521 None:intergenic 20.0%
!!! TTTTAGATGAATATGTTCTA+TGG + chr3_3:33490501-33490520 Msa0449500:intron 20.0%
!! TATGGTTCAAATAATTTACT+CGG + chr3_3:33490575-33490594 Msa0449500:intron 20.0%
!! GACAGAATGATATTTATATA+CGG + chr3_3:33490614-33490633 Msa0449500:intron 20.0%
!! AATATAATCCCAAATGAAAT+GGG + chr3_3:33490685-33490704 Msa0449500:CDS 20.0%
!!! CTAAAATATTTTCCATTAGT+TGG + chr3_3:33491329-33491348 Msa0449500:intron 20.0%
!! TTATTCTCAAATTACTTTCA+GGG + chr3_3:33491578-33491597 Msa0449500:intron 20.0%
!!! AATCAGTTATTTTGTCTATT+AGG + chr3_3:33491623-33491642 Msa0449500:CDS 20.0%
!! TATATACGCAATCTTAATAT+AGG - chr3_3:33492163-33492182 None:intergenic 20.0%
!!! ATACTGATTTTATAGAATCT+GGG - chr3_3:33492296-33492315 None:intergenic 20.0%
!!! AAAGCATATATTTTCTCAAA+AGG + chr3_3:33492580-33492599 Msa0449500:intron 20.0%
!! ATTGGAAAAAATGCAAATTT+AGG - chr3_3:33493403-33493422 None:intergenic 20.0%
!! AATGCAGTTAAAAATTCTAT+TGG - chr3_3:33493421-33493440 None:intergenic 20.0%
! ATTAGGAAAATGAAGAAGAT+TGG - chr3_3:33487111-33487130 None:intergenic 25.0%
! AGGATAATTAAGAATAATCC+TGG + chr3_3:33487318-33487337 Msa0449500:CDS 25.0%
!!! ATAAGAATGAAGTTGATGAT+TGG + chr3_3:33487379-33487398 Msa0449500:CDS 25.0%
!!! ATCGTTGTTTTTTAAATAGC+TGG + chr3_3:33487624-33487643 Msa0449500:intron 25.0%
!! TTTTAAATAGCTGACATGTT+TGG + chr3_3:33487873-33487892 Msa0449500:intron 25.0%
!! TTTTAAATAGCTGATGTGTT+TGG + chr3_3:33488031-33488050 Msa0449500:intron 25.0%
!! GATCAAGGTTTAAAACAAAA+GGG - chr3_3:33488243-33488262 None:intergenic 25.0%
!! TGATCAAGGTTTAAAACAAA+AGG - chr3_3:33488244-33488263 None:intergenic 25.0%
!!! AGAGTAAACAATTTTGATCA+AGG - chr3_3:33488258-33488277 None:intergenic 25.0%
! ATACCATAACCATTACTAAT+TGG - chr3_3:33488461-33488480 None:intergenic 25.0%
! TCGTTTGTATAATCAAAATC+TGG + chr3_3:33488584-33488603 Msa0449500:intron 25.0%
! CGTTTGTATAATCAAAATCT+GGG + chr3_3:33488585-33488604 Msa0449500:intron 25.0%
! AATGATATTGCATAGAATTG+TGG + chr3_3:33488652-33488671 Msa0449500:intron 25.0%
!!! TCAAAGTCAGGTTTTAAAAT+TGG + chr3_3:33488716-33488735 Msa0449500:intron 25.0%
!! AATTGGAACTACAATTTTTG+TGG + chr3_3:33488733-33488752 Msa0449500:intron 25.0%
!! TTGGAACTACAATTTTTGTA+TGG + chr3_3:33488776-33488795 Msa0449500:intron 25.0%
!!! AAAGTCAAGGTTTTAAATAG+CGG + chr3_3:33488900-33488919 Msa0449500:intron 25.0%
! TATTGATCTTAGTATTCACA+TGG - chr3_3:33489397-33489416 None:intergenic 25.0%
! TGTGAATACTAAGATCAATA+TGG + chr3_3:33489397-33489416 Msa0449500:intron 25.0%
!! AAACACTTTAGTTCATATCA+AGG - chr3_3:33489585-33489604 None:intergenic 25.0%
!! ACAGAAAGTATAAATGGTAA+AGG - chr3_3:33489923-33489942 None:intergenic 25.0%
!! GAAAAGACAGAAAGTATAAA+TGG - chr3_3:33489929-33489948 None:intergenic 25.0%
!! ATACTTTCTGTCTTTTCATT+TGG + chr3_3:33489932-33489951 Msa0449500:intron 25.0%
!! TACTTTCTGTCTTTTCATTT+GGG + chr3_3:33489933-33489952 Msa0449500:intron 25.0%
! TCTGTATTATGTGAATTTGA+TGG + chr3_3:33489961-33489980 Msa0449500:intron 25.0%
! AAACAAAAGGAGAAAATACT+AGG - chr3_3:33489998-33490017 None:intergenic 25.0%
! TTTCATTCGTAAATCATCTT+CGG + chr3_3:33490047-33490066 Msa0449500:CDS 25.0%
! GAAACAATAACCATAAATCT+CGG - chr3_3:33490268-33490287 None:intergenic 25.0%
!! TCTTAAATGGAAACAAGTTT+TGG - chr3_3:33490460-33490479 None:intergenic 25.0%
! AAAGTCAAAGTCTTCTTAAA+TGG - chr3_3:33490473-33490492 None:intergenic 25.0%
! GATTATATTGTCAAAGTAGA+TGG - chr3_3:33490674-33490693 None:intergenic 25.0%
! CAATATAATCCCAAATGAAA+TGG + chr3_3:33490684-33490703 Msa0449500:CDS 25.0%
! ATGAAAGGAATGTGAAAAAA+CGG - chr3_3:33490855-33490874 None:intergenic 25.0%
! AACCAAATTTAAATATACCG+GGG - chr3_3:33491043-33491062 None:intergenic 25.0%
! CAACCAAATTTAAATATACC+GGG - chr3_3:33491044-33491063 None:intergenic 25.0%
! GCAACCAAATTTAAATATAC+CGG - chr3_3:33491045-33491064 None:intergenic 25.0%
!! TTTTGCATGAAAAAAGACAA+AGG - chr3_3:33491172-33491191 None:intergenic 25.0%
!! TTTTAGATATAAGAGCCTTT+GGG - chr3_3:33491315-33491334 None:intergenic 25.0%
!! ATTTTAGATATAAGAGCCTT+TGG - chr3_3:33491316-33491335 None:intergenic 25.0%
! TTGTATGATTGTTTAAGAGA+TGG - chr3_3:33491417-33491436 None:intergenic 25.0%
! TATTGAAACACGAAATATGT+GGG - chr3_3:33491489-33491508 None:intergenic 25.0%
! ATATTGAAACACGAAATATG+TGG - chr3_3:33491490-33491509 None:intergenic 25.0%
!! GATTGTAATTTTCTCCTAAT+AGG + chr3_3:33491524-33491543 Msa0449500:intron 25.0%
! GTTATTCTCAAATTACTTTC+AGG + chr3_3:33491577-33491596 Msa0449500:intron 25.0%
! TCTTTCTTTAAACCAACATT+TGG - chr3_3:33491809-33491828 None:intergenic 25.0%
! TACAAGAAAATAATGAGAGA+TGG - chr3_3:33491945-33491964 None:intergenic 25.0%
! GCTCTAATATCATATTGAAT+TGG + chr3_3:33492066-33492085 Msa0449500:intron 25.0%
!! AATTTTCTGATTGTCTAACT+CGG + chr3_3:33492089-33492108 Msa0449500:intron 25.0%
!!! AACTCTTCTCTAGAATTAAA+GGG + chr3_3:33492265-33492284 Msa0449500:CDS 25.0%
!!! TACTGATTTTATAGAATCTG+GGG - chr3_3:33492295-33492314 None:intergenic 25.0%
!!! CATACTGATTTTATAGAATC+TGG - chr3_3:33492297-33492316 None:intergenic 25.0%
! ATAAAATCAGTATGTTATCC+AGG + chr3_3:33492303-33492322 Msa0449500:intron 25.0%
! TCATCCAAAATGACTAATTT+GGG - chr3_3:33492518-33492537 None:intergenic 25.0%
! TTCATCCAAAATGACTAATT+TGG - chr3_3:33492519-33492538 None:intergenic 25.0%
!! ATTCTTATTTCTTAGACTAC+TGG + chr3_3:33492623-33492642 Msa0449500:intron 25.0%
!! ATTTAACTATAGGTGTTATG+AGG - chr3_3:33493258-33493277 None:intergenic 25.0%
!! TAGACAGGATTAATTTGAAT+AGG - chr3_3:33493345-33493364 None:intergenic 25.0%
! ACACAAAATGAATCAAAACA+TGG + chr3_3:33493504-33493523 Msa0449500:intron 25.0%
!! TTCAAACCAGAATTTCTTTT+CGG + chr3_3:33493616-33493635 Msa0449500:intron 25.0%
!! CAAATTCTTCTTTTCTATCT+TGG - chr3_3:33493646-33493665 None:intergenic 25.0%
! CAAGATAGAAAAGAAGAATT+TGG + chr3_3:33493644-33493663 Msa0449500:CDS 25.0%
! CTCAATAAATCAATTCAAAC+AGG - chr3_3:33493926-33493945 None:intergenic 25.0%
!!! CTATTTCCATAAGTTGTTTT+CGG + chr3_3:33493989-33494008 Msa0449500:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr3_3:33494135-33494154 Msa0449500:intron 25.0%
!!! TTTTATGGTAGAAGTATACT+GGG + chr3_3:33494363-33494382 Msa0449500:CDS 25.0%
! AAATGAAAGGAAATAGAGAA+TGG + chr3_3:33494588-33494607 Msa0449500:three_prime_UTR 25.0%
!!! TGTTTTTTTTAAGCAACGCT+TGG - chr3_3:33487038-33487057 None:intergenic 30.0%
! TGCTTTTATTGCTTTGTCTA+TGG - chr3_3:33487139-33487158 None:intergenic 30.0%
TAGAGAAATACCTGTTGAAA+AGG + chr3_3:33487341-33487360 Msa0449500:CDS 30.0%
TTTCTGAACACTAGTAGAAT+TGG - chr3_3:33487487-33487506 None:intergenic 30.0%
GATGCTATTAGTACTAGTTA+CGG + chr3_3:33487685-33487704 Msa0449500:intron 30.0%
! TTTTAAATAGCTGACATGTC+TGG + chr3_3:33487748-33487767 Msa0449500:intron 30.0%
ACTAGTACTAATTGTGTGTT+CGG - chr3_3:33487817-33487836 None:intergenic 30.0%
! TATGGTCTTAGTTATAGTCA+TGG + chr3_3:33488303-33488322 Msa0449500:intron 30.0%
TGCATTCATCCAATTAGTAA+TGG + chr3_3:33488449-33488468 Msa0449500:intron 30.0%
CATCCAATTAGTAATGGTTA+TGG + chr3_3:33488455-33488474 Msa0449500:intron 30.0%
!! TTTGGTCTTAGTTATAGTCA+TGG + chr3_3:33488616-33488635 Msa0449500:intron 30.0%
ACTTTGATTATTCCTCCAAT+TGG - chr3_3:33488703-33488722 None:intergenic 30.0%
GTACTAAAAAATGTCGATCA+AGG - chr3_3:33488844-33488863 None:intergenic 30.0%
TGGAGGAATAATAAAAGTCA+AGG + chr3_3:33488887-33488906 Msa0449500:intron 30.0%
! ACCAAATGAAGTGTCAATTA+TGG + chr3_3:33488975-33488994 Msa0449500:intron 30.0%
ACCATAATTGACACTTCATT+TGG - chr3_3:33488979-33488998 None:intergenic 30.0%
! AATTTTTGCATTCTCAACAC+AGG - chr3_3:33489305-33489324 None:intergenic 30.0%
ATTTGAAGAATATAGGCACT+AGG - chr3_3:33489332-33489351 None:intergenic 30.0%
TGCCTATATTCTTCAAATAC+TGG + chr3_3:33489334-33489353 Msa0449500:intron 30.0%
GACCAGTATTTGAAGAATAT+AGG - chr3_3:33489339-33489358 None:intergenic 30.0%
ACTAAGGTGTACTAATTCTA+AGG - chr3_3:33489374-33489393 None:intergenic 30.0%
!! AATCATGTTTGTTGTTGTCA+TGG + chr3_3:33489679-33489698 Msa0449500:intron 30.0%
!!! TTTCTCCTTTTGTTTTAGAC+TGG + chr3_3:33490003-33490022 Msa0449500:intron 30.0%
!!! TTCTCCTTTTGTTTTAGACT+GGG + chr3_3:33490004-33490023 Msa0449500:intron 30.0%
AATGAAAGCTGATAACAAGA+AGG - chr3_3:33490034-33490053 None:intergenic 30.0%
TACTGAGTACTTCAAATCAA+TGG + chr3_3:33490156-33490175 Msa0449500:intron 30.0%
AATCTTACTGAAATGCTGAA+TGG - chr3_3:33490554-33490573 None:intergenic 30.0%
AGCATTTCAGTAAGATTCTA+TGG + chr3_3:33490557-33490576 Msa0449500:intron 30.0%
TGATATTTATATACGGCTTC+TGG + chr3_3:33490621-33490640 Msa0449500:CDS 30.0%
ACTTTCTAAATCCTCGTTAT+TGG + chr3_3:33490728-33490747 Msa0449500:CDS 30.0%
! TTTTCACATTCCTTTCATAG+AGG + chr3_3:33490857-33490876 Msa0449500:intron 30.0%
TTTCACATTCCTTTCATAGA+GGG + chr3_3:33490858-33490877 Msa0449500:intron 30.0%
! TCACAACATTTTCTTCTTCA+AGG - chr3_3:33490950-33490969 None:intergenic 30.0%
TACCCCGGTATATTTAAATT+TGG + chr3_3:33491038-33491057 Msa0449500:CDS 30.0%
TTTAGATATAAGAGCCTTTG+GGG - chr3_3:33491314-33491333 None:intergenic 30.0%
TGCAATTCTACTATACAACA+TGG + chr3_3:33491381-33491400 Msa0449500:intron 30.0%
ATCATACAAACTGAATATGC+AGG + chr3_3:33491428-33491447 Msa0449500:intron 30.0%
!! TCCTTTACAGCATTGATTTA+TGG + chr3_3:33491847-33491866 Msa0449500:intron 30.0%
!! CCTTTACAGCATTGATTTAT+GGG + chr3_3:33491848-33491867 Msa0449500:intron 30.0%
!! AGCATTGATTTATGGGAATT+CGG + chr3_3:33491855-33491874 Msa0449500:intron 30.0%
ATCTACAGTTTGATATCCTA+TGG + chr3_3:33492214-33492233 Msa0449500:intron 30.0%
TCTACAGTTTGATATCCTAT+GGG + chr3_3:33492215-33492234 Msa0449500:intron 30.0%
!! GAACTCTTCTCTAGAATTAA+AGG + chr3_3:33492264-33492283 Msa0449500:CDS 30.0%
! ATTTTCAGCAGATTTCCTAA+TGG - chr3_3:33492374-33492393 None:intergenic 30.0%
GTAGATTACAGAAACATCAT+TGG + chr3_3:33492394-33492413 Msa0449500:intron 30.0%
CATCCAAAATGACTAATTTG+GGG - chr3_3:33492517-33492536 None:intergenic 30.0%
!! ATTAGTCATTTTGGATGAAC+CGG + chr3_3:33492520-33492539 Msa0449500:CDS 30.0%
!!! ATACATCCTTTTTTGCATAC+CGG - chr3_3:33492542-33492561 None:intergenic 30.0%
TATTTCTTAGACTACTGGTA+TGG + chr3_3:33492628-33492647 Msa0449500:intron 30.0%
AGAATGTGTTGTGAGAATAA+TGG - chr3_3:33492711-33492730 None:intergenic 30.0%
TATTCTCACAACACATTCTA+TGG + chr3_3:33492712-33492731 Msa0449500:CDS 30.0%
!! ATTAGCTTTGGAAACAACAA+TGG + chr3_3:33492848-33492867 Msa0449500:CDS 30.0%
TGCTGCAAAAAACAATTCAT+GGG - chr3_3:33493006-33493025 None:intergenic 30.0%
ATGCTGCAAAAAACAATTCA+TGG - chr3_3:33493007-33493026 None:intergenic 30.0%
TTTAGATGTAGTACCAAAAG+AGG + chr3_3:33493026-33493045 Msa0449500:CDS 30.0%
! AAGTTATTGTTCTCCTCTTT+TGG - chr3_3:33493042-33493061 None:intergenic 30.0%
AGAAAAGAAAGCTTACTGTA+AGG - chr3_3:33493101-33493120 None:intergenic 30.0%
! TACAGTAAGCTTTCTTTTCT+TGG + chr3_3:33493101-33493120 Msa0449500:intron 30.0%
TGTAACATTAAGCAATAGAC+AGG - chr3_3:33493360-33493379 None:intergenic 30.0%
AATCAAAACATGGAAGATTG+TGG + chr3_3:33493514-33493533 Msa0449500:intron 30.0%
TTTCTTGAATATTGCAAAGC+AGG + chr3_3:33493709-33493728 Msa0449500:CDS 30.0%
TCGATTTCTTGAGAATTGAT+AGG - chr3_3:33493838-33493857 None:intergenic 30.0%
CGAAAACAACTTATGGAAAT+AGG - chr3_3:33493991-33494010 None:intergenic 30.0%
AATAAGCCGAAAACAACTTA+TGG - chr3_3:33493998-33494017 None:intergenic 30.0%
CTTATTTCGATAAGTTCTTG+AGG + chr3_3:33494012-33494031 Msa0449500:intron 30.0%
!! TTTTCACCAGTACTAGTTTA+TGG - chr3_3:33494162-33494181 None:intergenic 30.0%
! AAAAAGAGTAATCTCTAGAG+AGG - chr3_3:33494209-33494228 None:intergenic 30.0%
CAAAAAATTGCTAGTTGTCA+TGG - chr3_3:33494257-33494276 None:intergenic 30.0%
! ATAATTTTGCAGATTCCTGT+AGG + chr3_3:33494289-33494308 Msa0449500:intron 30.0%
!! GTTTTATGGTAGAAGTATAC+TGG + chr3_3:33494362-33494381 Msa0449500:CDS 30.0%
! AAGTTAGTTCAGACAGTTTT+CGG + chr3_3:33494524-33494543 Msa0449500:CDS 30.0%
ACTCAGGATAGAAAAATGAA+AGG + chr3_3:33494575-33494594 Msa0449500:three_prime_UTR 30.0%
! CTTGTATATGTTTTGTCAGT+TGG + chr3_3:33494656-33494675 Msa0449500:three_prime_UTR 30.0%
! TATGTTTTGTCAGTTGGAAT+CGG + chr3_3:33494662-33494681 Msa0449500:three_prime_UTR 30.0%
AAATGAAGAAGATTGGTGAG+AGG - chr3_3:33487104-33487123 None:intergenic 35.0%
ATTGATGGAGATGGAATCAA+TGG - chr3_3:33487204-33487223 None:intergenic 35.0%
ATGAAGAATTTCTCCTCACA+AGG - chr3_3:33487231-33487250 None:intergenic 35.0%
CTCCAAACGAAATCATAACA+CGG - chr3_3:33487261-33487280 None:intergenic 35.0%
TGTTATGATTTCGTTTGGAG+CGG + chr3_3:33487261-33487280 Msa0449500:CDS 35.0%
TCAACAATCGTACGAAACTT+TGG - chr3_3:33487297-33487316 None:intergenic 35.0%
AGTTTCGTACGATTGTTGAT+AGG + chr3_3:33487298-33487317 Msa0449500:CDS 35.0%
! AAACTCTTCACCTTTTCAAC+AGG - chr3_3:33487354-33487373 None:intergenic 35.0%
TCACTAAAATGAATAGCACC+AGG - chr3_3:33487429-33487448 None:intergenic 35.0%
GGCAACTGAAAATCAAAAGT+AGG - chr3_3:33487528-33487547 None:intergenic 35.0%
GAAATCGCTAGGTTTCTTAT+TGG + chr3_3:33487570-33487589 Msa0449500:CDS 35.0%
GAGTACATCAGAATCATGAT+GGG + chr3_3:33487780-33487799 Msa0449500:intron 35.0%
AGGTAAGTTTGTCAGAATCA+CGG + chr3_3:33487901-33487920 Msa0449500:intron 35.0%
ACTGGTACTACTTGTATGTT+CGG - chr3_3:33487966-33487985 None:intergenic 35.0%
CATACAAGTAGTACCAGTTA+TGG + chr3_3:33487968-33487987 Msa0449500:intron 35.0%
!! AGCTGACATGTTTGTTATCT+CGG + chr3_3:33488173-33488192 Msa0449500:intron 35.0%
TAATTGGATGAATGCACGTT+TGG - chr3_3:33488445-33488464 None:intergenic 35.0%
ACGGATAAATTTGACAGATG+TGG + chr3_3:33488494-33488513 Msa0449500:intron 35.0%
CTGATGTATGTAGTTCCAAT+TGG + chr3_3:33488685-33488704 Msa0449500:intron 35.0%
ATGTATGTAGTTCCAATTGG+AGG + chr3_3:33488688-33488707 Msa0449500:intron 35.0%
TTGGAGGAATAATCAAAGTC+AGG + chr3_3:33488704-33488723 Msa0449500:intron 35.0%
! GGAACTACAATTTTTGTGGT+TGG + chr3_3:33488737-33488756 Msa0449500:intron 35.0%
ATTGACACTTCATTTGGTTG+TGG - chr3_3:33488973-33488992 None:intergenic 35.0%
! TGAAGTGTCAATTATGGTCA+CGG + chr3_3:33488981-33489000 Msa0449500:intron 35.0%
! CAAGTGGAATGTGTTTTTCA+AGG + chr3_3:33489101-33489120 Msa0449500:CDS 35.0%
ATTGATCCAACTGTAGAGAA+AGG - chr3_3:33489150-33489169 None:intergenic 35.0%
TTTCTCTACAGTTGGATCAA+TGG + chr3_3:33489149-33489168 Msa0449500:CDS 35.0%
TTCTCTACAGTTGGATCAAT+GGG + chr3_3:33489150-33489169 Msa0449500:CDS 35.0%
GCAGTTGCAAGAAAAAATGT+TGG - chr3_3:33489177-33489196 None:intergenic 35.0%
CGTTCTTCAGATAAGTTCAT+TGG + chr3_3:33489209-33489228 Msa0449500:CDS 35.0%
! CTTAGTATTCACATGGACTA+AGG - chr3_3:33489390-33489409 None:intergenic 35.0%
GTGGTTAAATGTAGCTGATA+TGG + chr3_3:33489493-33489512 Msa0449500:intron 35.0%
!! TTGTCATGGCGTTTTTGTTT+GGG + chr3_3:33489693-33489712 Msa0449500:intron 35.0%
! TCTCTTCTCTTAGTTCTTAC+TGG + chr3_3:33489801-33489820 Msa0449500:CDS 35.0%
CTTCCTATTTGAACTCAACA+TGG + chr3_3:33489884-33489903 Msa0449500:CDS 35.0%
TCACCATGTTGAGTTCAAAT+AGG - chr3_3:33489890-33489909 None:intergenic 35.0%
! CAAACCCAGTCTAAAACAAA+AGG - chr3_3:33490011-33490030 None:intergenic 35.0%
CATGAAGCCGACAATAAATA+CGG - chr3_3:33490091-33490110 None:intergenic 35.0%
CTTCTCATTCTTTCATGACA+AGG + chr3_3:33490131-33490150 Msa0449500:intron 35.0%
ATAAATCTCGGTAATGACCA+GGG - chr3_3:33490256-33490275 None:intergenic 35.0%
GTTTCAACTCCTGAAGATAA+CGG + chr3_3:33490332-33490351 Msa0449500:CDS 35.0%
TTTCAACTCCTGAAGATAAC+GGG + chr3_3:33490333-33490352 Msa0449500:CDS 35.0%
!! ATGGAAACAAGTTTTGGTGT+TGG - chr3_3:33490454-33490473 None:intergenic 35.0%
TACTGAAATGCTGAATGGAA+GGG - chr3_3:33490549-33490568 None:intergenic 35.0%
TTACTGAAATGCTGAATGGA+AGG - chr3_3:33490550-33490569 None:intergenic 35.0%
ATGCAAAACAACTGCTCATA+GGG + chr3_3:33491184-33491203 Msa0449500:intron 35.0%
AAATTACTTTCAGGGCTTGT+GGG + chr3_3:33491586-33491605 Msa0449500:intron 35.0%
! TTTTGTCTATTAGGACCCAA+TGG + chr3_3:33491632-33491651 Msa0449500:CDS 35.0%
ACAGCTATTAGTTGTTTGAC+AGG + chr3_3:33491668-33491687 Msa0449500:CDS 35.0%
CAGCTATTAGTTGTTTGACA+GGG + chr3_3:33491669-33491688 Msa0449500:CDS 35.0%
CCCATAAATCAATGCTGTAA+AGG - chr3_3:33491851-33491870 None:intergenic 35.0%
GGCAAACTTAATTCTAACAG+TGG - chr3_3:33491982-33492001 None:intergenic 35.0%
AGACGTTGCTATATCTATCA+GGG + chr3_3:33492006-33492025 Msa0449500:intron 35.0%
CGCACAACTTGTATTTATAG+TGG + chr3_3:33492114-33492133 Msa0449500:intron 35.0%
! TAATTCTAGAGAAGAGTTCG+AGG - chr3_3:33492263-33492282 None:intergenic 35.0%
AGTGTTGCAATTGCACTTAT+CGG + chr3_3:33492488-33492507 Msa0449500:CDS 35.0%
! TGACCCCAAATTAGTCATTT+TGG + chr3_3:33492511-33492530 Msa0449500:CDS 35.0%
! ATCAGATTGAAGTCACGTTT+TGG + chr3_3:33492806-33492825 Msa0449500:CDS 35.0%
TTTCGTGACAGACGAAATAT+TGG + chr3_3:33492973-33492992 Msa0449500:intron 35.0%
CATGAGGAATCACATAAGTT+AGG - chr3_3:33493065-33493084 None:intergenic 35.0%
TGTGATTCCTCATGAAAAAG+AGG + chr3_3:33493071-33493090 Msa0449500:CDS 35.0%
ATCTGCTTAACAACATGCTA+CGG + chr3_3:33493146-33493165 Msa0449500:intron 35.0%
TTTCATGCATGAAGGAGATA+CGG - chr3_3:33493321-33493340 None:intergenic 35.0%
AAGATTGTGGTTACTTCGAT+TGG + chr3_3:33493527-33493546 Msa0449500:intron 35.0%
! CGTATAACCGCATTTTCTTT+CGG + chr3_3:33493806-33493825 Msa0449500:intron 35.0%
GCATATACCGAAAGAAAATG+CGG - chr3_3:33493816-33493835 None:intergenic 35.0%
! TCAAGAAATCGAGTTCTAGT+TGG + chr3_3:33493846-33493865 Msa0449500:intron 35.0%
! TACTAGTTTATGGTCCTGTT+TGG - chr3_3:33494152-33494171 None:intergenic 35.0%
ACTTCTACCATAAAACCTGT+GGG - chr3_3:33494358-33494377 None:intergenic 35.0%
TACTTCTACCATAAAACCTG+TGG - chr3_3:33494359-33494378 None:intergenic 35.0%
TTGAGGAATATGAGCTTTCT+GGG - chr3_3:33494428-33494447 None:intergenic 35.0%
TTTGAGGAATATGAGCTTTC+TGG - chr3_3:33494429-33494448 None:intergenic 35.0%
! GATGGTAGTTGGATATTTTG+AGG - chr3_3:33494445-33494464 None:intergenic 35.0%
CTGTCTGAACTAACTTGATT+TGG - chr3_3:33494520-33494539 None:intergenic 35.0%
! TGATTCATGCTCAGTGATTT+TGG + chr3_3:33494547-33494566 Msa0449500:exon 35.0%
! GATTCATGCTCAGTGATTTT+GGG + chr3_3:33494548-33494567 Msa0449500:exon 35.0%
TATGTCGAGATGGAAGAATT+TGG + chr3_3:33494686-33494705 Msa0449500:three_prime_UTR 35.0%
! TCTGTTTTGTGTGACAGAGA+GGG - chr3_3:33486954-33486973 None:intergenic 40.0%
! CATGACAAACGCTTTTACGT+TGG + chr3_3:33486999-33487018 Msa0449500:exon 40.0%
CTTTGTCTATGGCGAAGATT+AGG - chr3_3:33487128-33487147 None:intergenic 40.0%
ATGGAGATGGAATCAATGGT+GGG - chr3_3:33487200-33487219 None:intergenic 40.0%
CAAGGTTTGATTGATGGAGA+TGG - chr3_3:33487213-33487232 None:intergenic 40.0%
TCCATCAATCAAACCTTGTG+AGG + chr3_3:33487215-33487234 Msa0449500:CDS 40.0%
TCCTCACAAGGTTTGATTGA+TGG - chr3_3:33487219-33487238 None:intergenic 40.0%
TGCCGTGTTATGATTTCGTT+TGG + chr3_3:33487256-33487275 Msa0449500:CDS 40.0%
TCAACAGGTATTTCTCTACC+AGG - chr3_3:33487339-33487358 None:intergenic 40.0%
AAGAATCCTATGCAATGTCC+TGG + chr3_3:33487408-33487427 Msa0449500:CDS 40.0%
TCTACTAGTGTTCAGAAACG+TGG + chr3_3:33487489-33487508 Msa0449500:CDS 40.0%
ATCGCTAGGTTTCTTATTGG+AGG + chr3_3:33487573-33487592 Msa0449500:CDS 40.0%
! AGCTGGCATGTTTTGTATCA+CGG + chr3_3:33487641-33487660 Msa0449500:intron 40.0%
CGAGTACATCAGAATCATGA+TGG + chr3_3:33487779-33487798 Msa0449500:intron 40.0%
AGCTGACATGTTTGGTATCA+AGG + chr3_3:33487881-33487900 Msa0449500:intron 40.0%
ATCACTACCAATTGCGTGTT+CGG - chr3_3:33487942-33487961 None:intergenic 40.0%
TCTCAGCAGTATACCATAAC+TGG - chr3_3:33487984-33488003 None:intergenic 40.0%
AGCTGATGTGTTTGGTATCA+TGG + chr3_3:33488039-33488058 Msa0449500:intron 40.0%
TGGTGAGTTTGTCAGAATCA+CGG + chr3_3:33488059-33488078 Msa0449500:intron 40.0%
ACAGTGAGTTTGTCAGAATC+AGG + chr3_3:33488403-33488422 Msa0449500:intron 40.0%
CAGTGAGTTTGTCAGAATCA+GGG + chr3_3:33488404-33488423 Msa0449500:intron 40.0%
TGGTATACTGCTGAGAATCA+CGG + chr3_3:33488475-33488494 Msa0449500:intron 40.0%
! GACAGATGTGGTGTGAATTT+TGG + chr3_3:33488506-33488525 Msa0449500:intron 40.0%
!! CAAAATCTTTGATGACGCTG+CGG + chr3_3:33488542-33488561 Msa0449500:intron 40.0%
!!! GTCAAGGTTTTAAATAGCGG+TGG + chr3_3:33488903-33488922 Msa0449500:intron 40.0%
! TTTTAGACCCAGACTTCAAG+TGG + chr3_3:33489085-33489104 Msa0449500:intron 40.0%
ACACATTCCACTTGAAGTCT+GGG - chr3_3:33489095-33489114 None:intergenic 40.0%
AACACATTCCACTTGAAGTC+TGG - chr3_3:33489096-33489115 None:intergenic 40.0%
GACTATGACTATACCATACC+TGG - chr3_3:33489260-33489279 None:intergenic 40.0%
ACTCACGATGCTTGATATTG+CGG + chr3_3:33489464-33489483 Msa0449500:intron 40.0%
! AGCTGATATGGTCTTAATCG+TGG + chr3_3:33489505-33489524 Msa0449500:intron 40.0%
TCTTAATCGTGGTTGCGTTA+CGG + chr3_3:33489516-33489535 Msa0449500:intron 40.0%
! GTTGTCATGGCGTTTTTGTT+TGG + chr3_3:33489692-33489711 Msa0449500:intron 40.0%
!! ATGGCGTTTTTGTTTGGGAT+AGG + chr3_3:33489698-33489717 Msa0449500:intron 40.0%
! ACTCTGCATACTGGTTATCA+TGG + chr3_3:33489745-33489764 Msa0449500:CDS 40.0%
GGCTTCTCCGTATTTATTGT+CGG + chr3_3:33490081-33490100 Msa0449500:CDS 40.0%
TTGCAGATGGTATCAACAGT+AGG + chr3_3:33490215-33490234 Msa0449500:intron 40.0%
!! GGAGGTGTAAAAATTTTCCC+TGG + chr3_3:33490236-33490255 Msa0449500:CDS 40.0%
CATAAATCTCGGTAATGACC+AGG - chr3_3:33490257-33490276 None:intergenic 40.0%
CTGGTCATTACCGAGATTTA+TGG + chr3_3:33490255-33490274 Msa0449500:CDS 40.0%
TTCAACTCCTGAAGATAACG+GGG + chr3_3:33490334-33490353 Msa0449500:CDS 40.0%
GAATGGAAGGGAGGAATAAA+AGG - chr3_3:33490537-33490556 None:intergenic 40.0%
TCCTCACACCCATTTCATTT+GGG - chr3_3:33490696-33490715 None:intergenic 40.0%
TTCCTCACACCCATTTCATT+TGG - chr3_3:33490697-33490716 None:intergenic 40.0%
CTAAATCCTCGTTATTGGAC+AGG + chr3_3:33490733-33490752 Msa0449500:CDS 40.0%
ACATTCCTTTCATAGAGGGT+GGG + chr3_3:33490862-33490881 Msa0449500:intron 40.0%
GTAGTTGCATATCTTCAACC+CGG + chr3_3:33490889-33490908 Msa0449500:CDS 40.0%
! TGATGCAAATGTTGCTGTTC+AGG + chr3_3:33490995-33491014 Msa0449500:CDS 40.0%
! AATGTTGCTGTTCAGGTACA+AGG + chr3_3:33491002-33491021 Msa0449500:CDS 40.0%
TTTACCTTAACAGCGTGGTA+AGG - chr3_3:33491092-33491111 None:intergenic 40.0%
GATGATTTACCTTAACAGCG+TGG - chr3_3:33491097-33491116 None:intergenic 40.0%
CATGCAAAACAACTGCTCAT+AGG + chr3_3:33491183-33491202 Msa0449500:intron 40.0%
TGCAAAACAACTGCTCATAG+GGG + chr3_3:33491185-33491204 Msa0449500:intron 40.0%
ATGCATAGGTCACTCCTATT+AGG - chr3_3:33491541-33491560 None:intergenic 40.0%
TAATAGGAGTGACCTATGCA+TGG + chr3_3:33491540-33491559 Msa0449500:intron 40.0%
CAAATTACTTTCAGGGCTTG+TGG + chr3_3:33491585-33491604 Msa0449500:intron 40.0%
CTTTCGAATGTTTGACATGC+CGG - chr3_3:33491893-33491912 None:intergenic 40.0%
TAGATATAGCAACGTCTGGT+TGG - chr3_3:33492003-33492022 None:intergenic 40.0%
CTGATAGATATAGCAACGTC+TGG - chr3_3:33492007-33492026 None:intergenic 40.0%
CAGACGTTGCTATATCTATC+AGG + chr3_3:33492005-33492024 Msa0449500:intron 40.0%
! TATTAGAGCATCTAGCTACC+AGG - chr3_3:33492055-33492074 None:intergenic 40.0%
ACAGTTTGATATCCTATGGG+AGG + chr3_3:33492218-33492237 Msa0449500:intron 40.0%
CAAACTAGCAGAACAAGTTC+AGG - chr3_3:33492329-33492348 None:intergenic 40.0%
TACAGAAACATCATTGGCAG+AGG + chr3_3:33492400-33492419 Msa0449500:CDS 40.0%
GTAACTTCCAGCTCTTACTT+TGG - chr3_3:33492444-33492463 None:intergenic 40.0%
GATGAACCGGTATGCAAAAA+AGG + chr3_3:33492533-33492552 Msa0449500:intron 40.0%
CTGGTATGGATCCAATAACA+AGG + chr3_3:33492642-33492661 Msa0449500:CDS 40.0%
GTATGGATCCAATAACAAGG+AGG + chr3_3:33492645-33492664 Msa0449500:CDS 40.0%
! AATAACAAGGAGGCATGTGT+GGG + chr3_3:33492655-33492674 Msa0449500:CDS 40.0%
CCTTTGCCATGATTCCTATA+CGG - chr3_3:33492760-33492779 None:intergenic 40.0%
CGTATAGGAATCATGGCAAA+GGG + chr3_3:33492758-33492777 Msa0449500:CDS 40.0%
!! TTGAAGTCACGTTTTGGTAC+TGG + chr3_3:33492812-33492831 Msa0449500:CDS 40.0%
GAATAGGCTTTCATGCATGA+AGG - chr3_3:33493329-33493348 None:intergenic 40.0%
CAAGAGTTGTTAAACCAAGC+TGG - chr3_3:33493682-33493701 None:intergenic 40.0%
TGTCAAGGTCAAAGTCACTA+GGG - chr3_3:33493765-33493784 None:intergenic 40.0%
ATGTCAAGGTCAAAGTCACT+AGG - chr3_3:33493766-33493785 None:intergenic 40.0%
AAAATGCGGTTATACGTACC+TGG - chr3_3:33493802-33493821 None:intergenic 40.0%
TCTCTTGCAAAAAGTGAGCA+CGG + chr3_3:33493881-33493900 Msa0449500:intron 40.0%
!! CTCGAAAGTGCTTATGTAAG+TGG - chr3_3:33493954-33493973 None:intergenic 40.0%
ACAGGACCATAAACTAGTAC+TGG + chr3_3:33494153-33494172 Msa0449500:intron 40.0%
TATTCAGTAGACTCTGATCC+TGG - chr3_3:33494334-33494353 None:intergenic 40.0%
! TGAATACCCCACAGGTTTTA+TGG + chr3_3:33494348-33494367 Msa0449500:CDS 40.0%
CTTCTACCATAAAACCTGTG+GGG - chr3_3:33494357-33494376 None:intergenic 40.0%
TCGAGATGGAAGAATTTGGA+GGG + chr3_3:33494690-33494709 Msa0449500:three_prime_UTR 40.0%
! CTCTGTTTTGTGTGACAGAG+AGG - chr3_3:33486955-33486974 None:intergenic 45.0%
TTGGTGAGAGGAGTTGAAGA+AGG - chr3_3:33487092-33487111 None:intergenic 45.0%
GATGGAGATGGAATCAATGG+TGG - chr3_3:33487201-33487220 None:intergenic 45.0%
ATAGCACCAGGACATTGCAT+AGG - chr3_3:33487417-33487436 None:intergenic 45.0%
TGTGATACCGAACACGCAAT+TGG + chr3_3:33487932-33487951 Msa0449500:intron 45.0%
TGAGTTTGTCAGAATCACGG+TGG + chr3_3:33488062-33488081 Msa0449500:intron 45.0%
GAGTTTGTCAGAATCACGGT+GGG + chr3_3:33488063-33488082 Msa0449500:intron 45.0%
! CGCAGCGTCATCAAAGATTT+TGG - chr3_3:33488544-33488563 None:intergenic 45.0%
TAGAGAAAGGAGCCATTCCT+GGG - chr3_3:33489137-33489156 None:intergenic 45.0%
ATGGCTCCTTTCTCTACAGT+TGG + chr3_3:33489141-33489160 Msa0449500:CDS 45.0%
GAAAGAGCTTAAACTTCGCC+AGG + chr3_3:33489239-33489258 Msa0449500:CDS 45.0%
AGCTTAAACTTCGCCAGGTA+TGG + chr3_3:33489244-33489263 Msa0449500:intron 45.0%
TTTGCATTCTCAACACAGGC+AGG - chr3_3:33489301-33489320 None:intergenic 45.0%
CTTGATATTGCGGAGAGTTG+TGG + chr3_3:33489474-33489493 Msa0449500:intron 45.0%
ACTGGTTATCATGGCTAACC+TGG + chr3_3:33489754-33489773 Msa0449500:CDS 45.0%
CTGGTTATCATGGCTAACCT+GGG + chr3_3:33489755-33489774 Msa0449500:CDS 45.0%
GAGTGTAACAACTGTTTCCC+AGG - chr3_3:33489775-33489794 None:intergenic 45.0%
TCATCTTCGGCAACAACAGT+CGG + chr3_3:33490060-33490079 Msa0449500:CDS 45.0%
!! TATTGTCGGCTTCATGACTC+AGG + chr3_3:33490095-33490114 Msa0449500:CDS 45.0%
CAGATGGTATCAACAGTAGG+AGG + chr3_3:33490218-33490237 Msa0449500:intron 45.0%
CCTTGAGCAAAAGGATTAGG+CGG - chr3_3:33490290-33490309 None:intergenic 45.0%
AGGCCTTGAGCAAAAGGATT+AGG - chr3_3:33490293-33490312 None:intergenic 45.0%
CACACAGTCATCGTCGTTAA+CGG - chr3_3:33490387-33490406 None:intergenic 45.0%
TGAAATGCTGAATGGAAGGG+AGG - chr3_3:33490546-33490565 None:intergenic 45.0%
AACGAACCACAGAAAGAACG+TGG - chr3_3:33490647-33490666 None:intergenic 45.0%
TCCCAAATGAAATGGGTGTG+AGG + chr3_3:33490692-33490711 Msa0449500:CDS 45.0%
GACGGAGGACAAAAAGTGAA+AGG + chr3_3:33490757-33490776 Msa0449500:CDS 45.0%
CACATTCCTTTCATAGAGGG+TGG + chr3_3:33490861-33490880 Msa0449500:intron 45.0%
CAAATCCCACCCTCTATGAA+AGG - chr3_3:33490870-33490889 None:intergenic 45.0%
TGGACTAAACTCTTCATGCC+GGG - chr3_3:33490910-33490929 None:intergenic 45.0%
! GTGGACTAAACTCTTCATGC+CGG - chr3_3:33490911-33490930 None:intergenic 45.0%
TCAAGGACGTCTTCATCATC+TGG - chr3_3:33490933-33490952 None:intergenic 45.0%
GTGAAGCAGCAACAAACACA+AGG + chr3_3:33490966-33490985 Msa0449500:CDS 45.0%
!! AGCATCGACTGTATTATCCG+TGG + chr3_3:33491283-33491302 Msa0449500:intron 45.0%
CTTGATCATCAGCCATGCAT+AGG - chr3_3:33491555-33491574 None:intergenic 45.0%
CTATGCATGGCTGATGATCA+AGG + chr3_3:33491553-33491572 Msa0449500:intron 45.0%
TCTATTAGGACCCAATGGAG+CGG + chr3_3:33491637-33491656 Msa0449500:CDS 45.0%
! GTAGTTTTTCCCGCTCCATT+GGG - chr3_3:33491650-33491669 None:intergenic 45.0%
! TGTAGTTTTTCCCGCTCCAT+TGG - chr3_3:33491651-33491670 None:intergenic 45.0%
GGGATAACTCCAGTAACTGA+TGG + chr3_3:33491689-33491708 Msa0449500:CDS 45.0%
ACTCCAGTAACTGATGGAGA+TGG + chr3_3:33491695-33491714 Msa0449500:CDS 45.0%
TCACCATCTCCATCAGTTAC+TGG - chr3_3:33491701-33491720 None:intergenic 45.0%
TGAGAGATGGAAAGACACCT+GGG - chr3_3:33491932-33491951 None:intergenic 45.0%
ATGAGAGATGGAAAGACACC+TGG - chr3_3:33491933-33491952 None:intergenic 45.0%
GTAAGAGCTGGAAGTTACAG+TGG + chr3_3:33492446-33492465 Msa0449500:CDS 45.0%
! CACACATGCCTCCTTGTTAT+TGG - chr3_3:33492656-33492675 None:intergenic 45.0%
! CAATAACAAGGAGGCATGTG+TGG + chr3_3:33492654-33492673 Msa0449500:CDS 45.0%
GACATTCTAAGCGACCGTAT+AGG + chr3_3:33492743-33492762 Msa0449500:CDS 45.0%
AAGCGACCGTATAGGAATCA+TGG + chr3_3:33492751-33492770 Msa0449500:CDS 45.0%
CCGTATAGGAATCATGGCAA+AGG + chr3_3:33492757-33492776 Msa0449500:CDS 45.0%
ACGTGACTTCAATCTGATCG+AGG - chr3_3:33492804-33492823 None:intergenic 45.0%
GATGCTGTGTCATCATTTGC+AGG - chr3_3:33492881-33492900 None:intergenic 45.0%
!!! AGGAGTGCCTCTTTTTCATG+AGG - chr3_3:33493081-33493100 None:intergenic 45.0%
GGAGCTCCGAAAAGAAATTC+TGG - chr3_3:33493625-33493644 None:intergenic 45.0%
!! TAGAAAGTGCTGCAGCTGAA+GGG + chr3_3:33493738-33493757 Msa0449500:CDS 45.0%
GTGACTTTGACCTTGACATC+TGG + chr3_3:33493767-33493786 Msa0449500:CDS 45.0%
TTGCAAAAAGTGAGCACGGA+TGG + chr3_3:33493885-33493904 Msa0449500:intron 45.0%
! TAGAGAGGCATGCCCTAAAA+TGG - chr3_3:33494194-33494213 None:intergenic 45.0%
TCCTGTAGGAGCTATGTATG+TGG + chr3_3:33494303-33494322 Msa0449500:CDS 45.0%
CCTGTAGGAGCTATGTATGT+GGG + chr3_3:33494304-33494323 Msa0449500:CDS 45.0%
GCTATGTATGTGGGATTTCC+AGG + chr3_3:33494313-33494332 Msa0449500:CDS 45.0%
TACTGGGAACAAGATGACAC+CGG + chr3_3:33494379-33494398 Msa0449500:CDS 45.0%
! GAATATGAGCTTTCTGGGAG+TGG - chr3_3:33494423-33494442 None:intergenic 45.0%
TTGCAGTAGCAGATGGTAGT+TGG - chr3_3:33494456-33494475 None:intergenic 45.0%
!!! AGTGATTTTGGGACACACTC+AGG + chr3_3:33494559-33494578 Msa0449500:three_prime_UTR 45.0%
TGGAATCGGATATGTCGAGA+TGG + chr3_3:33494676-33494695 Msa0449500:three_prime_UTR 45.0%
GTCGAGATGGAAGAATTTGG+AGG + chr3_3:33494689-33494708 Msa0449500:three_prime_UTR 45.0%
CGAGATGGAAGAATTTGGAG+GGG + chr3_3:33494691-33494710 Msa0449500:three_prime_UTR 45.0%
ATGGAAGAATTTGGAGGGGA+AGG + chr3_3:33494695-33494714 Msa0449500:three_prime_UTR 45.0%
TGGAAGAATTTGGAGGGGAA+GGG + chr3_3:33494696-33494715 Msa0449500:three_prime_UTR 45.0%
!!! TTTATTTAAAATCAAAATAT+GGG + chr3_3:33488277-33488296 Msa0449500:intron 5.0%
AGAGAGAGAAGAGGTGAGGA+AGG - chr3_3:33486931-33486950 None:intergenic 50.0%
CATTGACAGTGATGCAGCTG+TGG - chr3_3:33488937-33488956 None:intergenic 50.0%
CACAGCTGCATCACTGTCAA+TGG + chr3_3:33488935-33488954 Msa0449500:intron 50.0%
GTAGAGAAAGGAGCCATTCC+TGG - chr3_3:33489138-33489157 None:intergenic 50.0%
GGATAGGCAATGACCGTGAT+GGG + chr3_3:33489714-33489733 Msa0449500:intron 50.0%
GATAGGCAATGACCGTGATG+GGG + chr3_3:33489715-33489734 Msa0449500:intron 50.0%
AGAGTCGTAAAGCCCCATCA+CGG - chr3_3:33489730-33489749 None:intergenic 50.0%
GGCTTTACGACTCTGCATAC+TGG + chr3_3:33489736-33489755 Msa0449500:CDS 50.0%
! CCGCCTAATCCTTTTGCTCA+AGG + chr3_3:33490287-33490306 Msa0449500:CDS 50.0%
ACACTCAGGCCTTGAGCAAA+AGG - chr3_3:33490299-33490318 None:intergenic 50.0%
CAGCTAACCCCGTTATCTTC+AGG - chr3_3:33490344-33490363 None:intergenic 50.0%
!! CTGAAGATAACGGGGTTAGC+TGG + chr3_3:33490342-33490361 Msa0449500:CDS 50.0%
! CGATGACTGTGTGCTGACAA+TGG + chr3_3:33490394-33490413 Msa0449500:CDS 50.0%
TTCTGGCCACGTTCTTTCTG+TGG + chr3_3:33490638-33490657 Msa0449500:CDS 50.0%
CCTCGTTATTGGACAGGAGA+CGG + chr3_3:33490739-33490758 Msa0449500:CDS 50.0%
AGGACGTCTTCATCATCTGG+TGG - chr3_3:33490930-33490949 None:intergenic 50.0%
GGCATTGTGAAGACTTACCC+CGG + chr3_3:33491023-33491042 Msa0449500:CDS 50.0%
TGCTCCTTACCACGCTGTTA+AGG + chr3_3:33491085-33491104 Msa0449500:CDS 50.0%
TATCCGTGGTTTAGCCCCAA+AGG + chr3_3:33491297-33491316 Msa0449500:intron 50.0%
CGATGTCGAGAGCCAACTAA+TGG - chr3_3:33491344-33491363 None:intergenic 50.0%
CTATTAGGACCCAATGGAGC+GGG + chr3_3:33491638-33491657 Msa0449500:CDS 50.0%
AATTCGGTCCGAAGCTCTAC+CGG + chr3_3:33491871-33491890 Msa0449500:CDS 50.0%
TTGACATGCCGGTAGAGCTT+CGG - chr3_3:33491882-33491901 None:intergenic 50.0%
GAGAGATGGAAAGACACCTG+GGG - chr3_3:33491931-33491950 None:intergenic 50.0%
AGCATCTAGCTACCAGGTCA+GGG - chr3_3:33492049-33492068 None:intergenic 50.0%
! ATCCTATGGGAGGCTTTGTC+TGG + chr3_3:33492228-33492247 Msa0449500:CDS 50.0%
TAGCAGAACAAGTTCAGGCC+TGG - chr3_3:33492324-33492343 None:intergenic 50.0%
ATTGGCAGAGGTGAGACTCA+CGG + chr3_3:33492412-33492431 Msa0449500:CDS 50.0%
GATGCAGCCAAAGTAAGAGC+TGG + chr3_3:33492434-33492453 Msa0449500:CDS 50.0%
AGAGCTGGAAGTTACAGTGG+AGG + chr3_3:33492449-33492468 Msa0449500:CDS 50.0%
AGCATCAGCAAGACATCGTG+AGG + chr3_3:33492895-33492914 Msa0449500:CDS 50.0%
GGCATATCTGACATCCAGCT+TGG + chr3_3:33493665-33493684 Msa0449500:CDS 50.0%
!! CTAGAAAGTGCTGCAGCTGA+AGG + chr3_3:33493737-33493756 Msa0449500:CDS 50.0%
GACAGACTCTCCAGATGTCA+AGG - chr3_3:33493780-33493799 None:intergenic 50.0%
CCCACATACATAGCTCCTAC+AGG - chr3_3:33494307-33494326 None:intergenic 50.0%
GAGTCTACTGAATACCCCAC+AGG + chr3_3:33494340-33494359 Msa0449500:CDS 50.0%
ACCGGTACCCTTTGTATTGC+CGG + chr3_3:33494397-33494416 Msa0449500:CDS 50.0%
CGTTGTCTTGCAGTAGCAGA+TGG - chr3_3:33494463-33494482 None:intergenic 50.0%
AAGAATTTGGAGGGGAAGGG+AGG + chr3_3:33494699-33494718 Msa0449500:three_prime_UTR 50.0%
AGGGAGAGAGAGAAGAGGTG+AGG - chr3_3:33486935-33486954 None:intergenic 55.0%
CAGAGAGGGAGAGAGAGAAG+AGG - chr3_3:33486940-33486959 None:intergenic 55.0%
!! GTTGCCTCTTCAGCTTGCTG+CGG + chr3_3:33487542-33487561 Msa0449500:CDS 55.0%
TGACGCTGCGGCTTAGATTG+TGG + chr3_3:33488554-33488573 Msa0449500:intron 55.0%
TTCAAGGAATTCCCGCACCC+AGG + chr3_3:33489117-33489136 Msa0449500:CDS 55.0%
AAAGGAGCCATTCCTGGGTG+CGG - chr3_3:33489132-33489151 None:intergenic 55.0%
GGGATAGGCAATGACCGTGA+TGG + chr3_3:33489713-33489732 Msa0449500:intron 55.0%
AGGCCTGAGTGTGCTTGCAA+AGG + chr3_3:33490307-33490326 Msa0449500:CDS 55.0%
CAGCCTTTGCAAGCACACTC+AGG - chr3_3:33490313-33490332 None:intergenic 55.0%
!! GGGGTTAGCTGGAATACACG+AGG + chr3_3:33490353-33490372 Msa0449500:CDS 55.0%
CCGTCTCCTGTCCAATAACG+AGG - chr3_3:33490742-33490761 None:intergenic 55.0%
CGTTATTGGACAGGAGACGG+AGG + chr3_3:33490742-33490761 Msa0449500:CDS 55.0%
!! GAGCCTTTGGGGCTAAACCA+CGG - chr3_3:33491303-33491322 None:intergenic 55.0%
TCAGTGATTCCTCCCTGACC+TGG + chr3_3:33492034-33492053 Msa0449500:intron 55.0%
ATCTAGCTACCAGGTCAGGG+AGG - chr3_3:33492046-33492065 None:intergenic 55.0%
GAGCATCTAGCTACCAGGTC+AGG - chr3_3:33492050-33492069 None:intergenic 55.0%
GACCAGACAAAGCCTCCCAT+AGG - chr3_3:33492233-33492252 None:intergenic 55.0%
AAGGGAAAGCTGCGCTGCAT+TGG + chr3_3:33492776-33492795 Msa0449500:CDS 55.0%
GACATCTGGAGAGTCTGTCC+AGG + chr3_3:33493781-33493800 Msa0449500:CDS 55.0%
! GCCGGCAATACAAAGGGTAC+CGG - chr3_3:33494401-33494420 None:intergenic 55.0%
GGAGTGGCCGGCAATACAAA+GGG - chr3_3:33494407-33494426 None:intergenic 55.0%
! ATGAGCTTTCTGGGAGTGGC+CGG - chr3_3:33494419-33494438 None:intergenic 55.0%
CTGCTACTGCAAGACAACGC+CGG + chr3_3:33494464-33494483 Msa0449500:CDS 55.0%
CTCCATGAACTGACCCTGAC+CGG - chr3_3:33494486-33494505 None:intergenic 55.0%
CTGCGGAGCGTGAAATCGCT+AGG + chr3_3:33487559-33487578 Msa0449500:CDS 60.0%
GGAATTCCCGCACCCAGGAA+TGG + chr3_3:33489122-33489141 Msa0449500:CDS 60.0%
AAGGAGCCATTCCTGGGTGC+GGG - chr3_3:33489131-33489150 None:intergenic 60.0%
GGGAGTGGCCGGCAATACAA+AGG - chr3_3:33494408-33494427 None:intergenic 60.0%
ACTGCAAGACAACGCCGGTC+AGG + chr3_3:33494469-33494488 Msa0449500:CDS 60.0%
CTGCAAGACAACGCCGGTCA+GGG + chr3_3:33494470-33494489 Msa0449500:CDS 60.0%
CGCTCCGCAGCAAGCTGAAG+AGG - chr3_3:33487549-33487568 None:intergenic 65.0%
CGCCGGTCAGGGTCAGTTCA+TGG + chr3_3:33494481-33494500 Msa0449500:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 33486917 33494835 33486917 ID=Msa0449500;Name=Msa0449500
chr3_3 mRNA 33486917 33494835 33486917 ID=Msa0449500-mRNA-1;Parent=Msa0449500;Name=Msa0449500-mRNA-1;_AED=0.05;_eAED=0.05;_QI=83|1|1|1|1|1|15|286|956
chr3_3 exon 33486917 33487594 33486917 ID=Msa0449500-mRNA-1:exon:5968;Parent=Msa0449500-mRNA-1
chr3_3 exon 33489091 33489260 33489091 ID=Msa0449500-mRNA-1:exon:5969;Parent=Msa0449500-mRNA-1
chr3_3 exon 33489720 33489905 33489720 ID=Msa0449500-mRNA-1:exon:5970;Parent=Msa0449500-mRNA-1
chr3_3 exon 33490021 33490116 33490021 ID=Msa0449500-mRNA-1:exon:5971;Parent=Msa0449500-mRNA-1
chr3_3 exon 33490221 33490415 33490221 ID=Msa0449500-mRNA-1:exon:5972;Parent=Msa0449500-mRNA-1
chr3_3 exon 33490619 33490778 33490619 ID=Msa0449500-mRNA-1:exon:5973;Parent=Msa0449500-mRNA-1
chr3_3 exon 33490877 33491106 33490877 ID=Msa0449500-mRNA-1:exon:5974;Parent=Msa0449500-mRNA-1
chr3_3 exon 33491599 33491716 33491599 ID=Msa0449500-mRNA-1:exon:5975;Parent=Msa0449500-mRNA-1
chr3_3 exon 33491857 33491933 33491857 ID=Msa0449500-mRNA-1:exon:5976;Parent=Msa0449500-mRNA-1
chr3_3 exon 33492222 33492311 33492222 ID=Msa0449500-mRNA-1:exon:5977;Parent=Msa0449500-mRNA-1
chr3_3 exon 33492398 33492541 33492398 ID=Msa0449500-mRNA-1:exon:5978;Parent=Msa0449500-mRNA-1
chr3_3 exon 33492638 33492940 33492638 ID=Msa0449500-mRNA-1:exon:5979;Parent=Msa0449500-mRNA-1
chr3_3 exon 33493024 33493104 33493024 ID=Msa0449500-mRNA-1:exon:5980;Parent=Msa0449500-mRNA-1
chr3_3 exon 33493626 33493802 33493626 ID=Msa0449500-mRNA-1:exon:5981;Parent=Msa0449500-mRNA-1
chr3_3 exon 33494301 33494835 33494301 ID=Msa0449500-mRNA-1:exon:5982;Parent=Msa0449500-mRNA-1
chr3_3 five_prime_UTR 33486917 33486999 33486917 ID=Msa0449500-mRNA-1:five_prime_utr;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33487000 33487594 33487000 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33489091 33489260 33489091 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33489720 33489905 33489720 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33490021 33490116 33490021 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33490221 33490415 33490221 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33490619 33490778 33490619 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33490877 33491106 33490877 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33491599 33491716 33491599 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33491857 33491933 33491857 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33492222 33492311 33492222 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33492398 33492541 33492398 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33492638 33492940 33492638 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33493024 33493104 33493024 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33493626 33493802 33493626 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 CDS 33494301 33494549 33494301 ID=Msa0449500-mRNA-1:cds;Parent=Msa0449500-mRNA-1
chr3_3 three_prime_UTR 33494550 33494835 33494550 ID=Msa0449500-mRNA-1:three_prime_utr;Parent=Msa0449500-mRNA-1
Gene Sequence

>Msa0449500

ATGACAAACGCTTTTACGTTGGTAACACAACAATACCAAGCGTTGCTTAAAAAAAACATATTACTCTCATGGCGCAGCAAAAGATCAATCCTTCTTCAACTCCTCTCACCAATCTTCTTCATTTTCCTAATCTTCGCCATAGACAAAGCAATAAAAGCACAATCATCAACAACTTCTGCATTCAAAGAAATCAGAAACCCACCATTGATTCCATCTCCATCAATCAAACCTTGTGAGGAGAAATTCTTCATGAAAATGCCGTGTTATGATTTCGTTTGGAGCGGTGATGATGATCCAAAGTTTCGTACGATTGTTGATAGGATAATTAAGAATAATCCTGGTAGAGAAATACCTGTTGAAAAGGTGAAGAGTTTTCGTGATAAGAATGAAGTTGATGATTGGTTGTTTAAGAATCCTATGCAATGTCCTGGTGCTATTCATTTTAGTGAAAAGAATGGAAGTATTATTAGTTATGGGATTCAGACCAATTCTACTAGTGTTCAGAAACGTGGCAAGTATGAAGATCCTACTTTTGATTTTCAGTTGCCTCTTCAGCTTGCTGCGGAGCGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGACTTCAAGTGGAATGTGTTTTTCAAGGAATTCCCGCACCCAGGAATGGCTCCTTTCTCTACAGTTGGATCAATGGGTCCAACATTTTTTCTTGCAACTGCTATGTTTAATTTCGTTCTTCAGATAAGTTCATTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCATACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACACTCATATCATCTCTTCTCTTAGTTCTTACTGGCATGATGTTTCAGTTTGATTTCTTCTTGAAAAACAATTTCGCTGTTCTGTTCTTTTTGTTCTTCCTATTTGAACTCAACATGACTGGGTTTGCCTTCTTGTTATCAGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTCTCCGTATTTATTGTCGGCTTCATGACTCAGATGGTATCAACAGTAGGAGGTGTAAAAATTTTCCCTGGTCATTACCGAGATTTATGGTTATTGTTTCCGCCTAATCCTTTTGCTCAAGGCCTGAGTGTGCTTGCAAAGGCTGTTTCAACTCCTGAAGATAACGGGGTTAGCTGGAATACACGAGGAAAATGTGCCGTTAACGACGATGACTGTGTGCTGACAATGAATGATATTTATATACGGCTTCTGGCCACGTTCTTTCTGTGGTTCGTTCTTGCCATCTACTTTGACAATATAATCCCAAATGAAATGGGTGTGAGGAAATCTGTGTTGTACTTTCTAAATCCTCGTTATTGGACAGGAGACGGAGGACAAAAAGTGAAAGAGGGTGGGATTTGTAGTTGCATATCTTCAACCCGGCATGAAGAGTTTAGTCCACCAGATGATGAAGACGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACAAACACAAGGTATTGTTGATGCAAATGTTGCTGTTCAGGTACAAGGCATTGTGAAGACTTACCCCGGTATATTTAAATTTGGTTGCTGCTGTAACTGTAAAAGAACTGCTCCTTACCACGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGAATCAGTTATTTTGTCTATTAGGACCCAATGGAGCGGGAAAAACTACAGCTATTAGTTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGGAATTCGGTCCGAAGCTCTACCGGCATGTCAAACATTCGAAAGATTATTGGAGTGTGTCCCCAGTTTGATATCCTATGGGAGGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCTCTAGAATTAAAGGGCTGTCCCCAGATTCTATAAAATCAATTACAGAAACATCATTGGCAGAGGTGAGACTCACGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAGCGTCGTCTCAGTGTTGCAATTGCACTTATCGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTATTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGCGACCGTATAGGAATCATGGCAAAGGGAAAGCTGCGCTGCATTGGAACCTCGATCAGATTGAAGTCACGTTTTGGTACTGGCTTTATTACTAATATTAGCTTTGGAAACAACAATGGTCACAGTCCTGCAAATGATGACACAGCATCAGCAAGACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTCCTAACTTATGTGATTCCTCATGAAAAAGAGGCACTCCTTACAAATTTCTTTTCGGAGCTCCAAGATAGAAAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTTTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAGGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGACCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTAGGAGCTATGTATGTGGGATTTCCAGGATCAGAGTCTACTGAATACCCCACAGGTTTTATGGTAGAAGTATACTGGGAACAAGATGACACCGGTACCCTTTGTATTGCCGGCCACTCCCAGAAAGCTCATATTCCTCAAAATATCCAACTACCATCTGCTACTGCAAGACAACGCCGGTCAGGGTCAGTTCATGGAGTTGTGATTGATCCAAATCAAGTTAGTTCAGACAGTTTTCGGTGA
Protein sequence

>Msa0449500

MTNAFTLVTQQYQALLKKNILLSWRSKRSILLQLLSPIFFIFLIFAIDKAIKAQSSTTSAFKEIRNPPLIPSPSIKPCEEKFFMKMPCYDFVWSGDDDPKFRTIVDRIIKNNPGREIPVEKVKSFRDKNEVDDWLFKNPMQCPGAIHFSEKNGSIISYGIQTNSTSVQKRGKYEDPTFDFQLPLQLAAEREIARFLIGDPDFKWNVFFKEFPHPGMAPFSTVGSMGPTFFLATAMFNFVLQISSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTLISSLLLVLTGMMFQFDFFLKNNFAVLFFLFFLFELNMTGFAFLLSAFIRKSSSATTVGFSVFIVGFMTQMVSTVGGVKIFPGHYRDLWLLFPPNPFAQGLSVLAKAVSTPEDNGVSWNTRGKCAVNDDDCVLTMNDIYIRLLATFFLWFVLAIYFDNIIPNEMGVRKSVLYFLNPRYWTGDGGQKVKEGGICSCISSTRHEEFSPPDDEDVLEEENVVKQQQTQGIVDANVAVQVQGIVKTYPGIFKFGCCCNCKRTAPYHAVKGLWVNFTKNQLFCLLGPNGAGKTTAISCLTGITPVTDGDALIYGNSVRSSTGMSNIRKIIGVCPQFDILWEALSGQEHLELFSRIKGLSPDSIKSITETSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIILTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFGNNNGHSPANDDTASARHREAVKQFFKNHLDVVPKEENNNFLTYVIPHEKEALLTNFFSELQDRKEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGTLVTLTLTSGESVQIPVGAMYVGFPGSESTEYPTGFMVEVYWEQDDTGTLCIAGHSQKAHIPQNIQLPSATARQRRSGSVHGVVIDPNQVSSDSFR*