AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615780 MtrunA17_Chr4g0052521 97.332 1012 7 1 1 1012 1 992 0.0 1990
Msa0615780 MtrunA17_Chr2g0297051 79.804 1020 163 7 5 1011 41 1030 0.0 1604
Msa0615780 MtrunA17_Chr5g0397621 48.321 923 428 10 93 1009 14 893 0.0 827
Msa0615780 MtrunA17_Chr5g0397621 37.500 96 50 1 12 107 21 106 4.06e-11 67.4
Msa0615780 MtrunA17_Chr8g0339181 46.224 993 477 14 19 1001 6 951 0.0 788
Msa0615780 MtrunA17_Chr8g0374321 42.530 656 348 6 45 696 59 689 4.40e-171 517
Msa0615780 MtrunA17_Chr8g0374321 30.675 163 96 4 108 255 30 190 6.18e-14 76.3
Msa0615780 MtrunA17_Chr3g0136331 34.795 730 392 15 302 1001 210 885 3.24e-117 381
Msa0615780 MtrunA17_Chr4g0050431 36.835 695 360 14 340 1010 285 924 8.45e-117 382
Msa0615780 MtrunA17_Chr8g0374331 60.331 242 96 0 768 1009 1 242 1.34e-90 289
Msa0615780 MtrunA17_Chr8g0374391 60.000 235 94 0 775 1009 1 235 2.56e-86 277
Msa0615780 MtrunA17_Chr2g0297871 32.874 508 276 14 460 960 63 512 6.72e-69 243
Msa0615780 MtrunA17_Chr4g0071991 27.119 767 416 25 203 950 17 659 2.10e-65 239
Msa0615780 MtrunA17_Chr8g0374371 51.691 207 79 2 425 630 1 187 3.91e-63 213
Msa0615780 MtrunA17_Chr4g0053441 25.722 727 401 24 296 976 136 769 7.50e-36 146
Msa0615780 MtrunA17_Chr7g0263361 31.282 195 100 4 808 970 625 817 1.26e-20 98.6
Msa0615780 MtrunA17_Chr4g0072131 22.362 635 359 22 429 993 135 705 1.59e-20 97.8
Msa0615780 MtrunA17_Chr3g0138931 21.392 589 361 14 429 968 132 667 5.09e-20 96.3
Msa0615780 MtrunA17_Chr2g0298031 22.591 602 339 21 429 968 137 673 6.73e-20 95.9
Msa0615780 MtrunA17_Chr8g0365021 22.357 577 329 19 439 954 208 726 1.39e-19 95.1
Msa0615780 MtrunA17_Chr1g0148031 21.333 600 348 17 429 968 132 667 6.90e-19 92.8
Msa0615780 MtrunA17_Chr8g0340261 30.500 200 105 5 792 957 174 373 1.20e-18 90.9
Msa0615780 MtrunA17_Chr6g0452721 22.586 580 324 18 439 954 140 658 1.95e-18 91.3
Msa0615780 MtrunA17_Chr8g0346461 30.601 183 89 4 808 954 618 798 1.96e-18 91.3
Msa0615780 MtrunA17_Chr4g0059961 22.417 629 350 21 439 993 142 706 2.48e-18 90.9
Msa0615780 MtrunA17_Chr6g0456201 28.426 197 108 4 794 957 625 821 8.08e-18 89.4
Msa0615780 MtrunA17_Chr5g0401211 32.402 179 92 3 810 959 649 827 1.01e-17 89.0
Msa0615780 MtrunA17_Chr1g0147981 21.626 578 332 19 439 954 155 673 1.66e-17 88.2
Msa0615780 MtrunA17_Chr2g0298871 28.962 183 97 2 808 957 695 877 6.00e-17 86.7
Msa0615780 MtrunA17_Chr4g0020551 30.508 177 95 3 809 957 584 760 6.39e-17 86.3
Msa0615780 MtrunA17_Chr8g0382071 32.022 178 92 5 809 957 648 825 7.67e-17 86.3
Msa0615780 MtrunA17_Chr8g0335291 21.528 576 334 17 439 954 146 663 2.09e-16 84.7
Msa0615780 MtrunA17_Chr7g0260401 28.962 183 96 2 809 957 672 854 2.14e-16 84.7
Msa0615780 MtrunA17_Chr4g0054021 30.168 179 96 3 810 959 572 750 2.19e-16 84.3
Msa0615780 MtrunA17_Chr2g0333721 20.513 585 346 14 429 954 130 654 4.76e-16 83.6
Msa0615780 MtrunA17_Chr3g0134771 28.283 198 113 4 791 959 632 829 5.48e-16 83.2
Msa0615780 MtrunA17_Chr2g0304941 21.502 586 339 19 429 954 133 657 7.14e-16 82.8
Msa0615780 MtrunA17_Chr7g0276551 24.603 378 221 11 630 954 55 421 1.02e-15 82.0
Msa0615780 MtrunA17_Chr8g0355421 32.044 181 92 5 809 959 639 818 1.53e-15 82.0
Msa0615780 MtrunA17_Chr1g0173111 31.319 182 95 6 806 957 641 822 2.31e-15 81.3
Msa0615780 MtrunA17_Chr4g0065481 20.761 578 353 20 429 954 133 657 3.84e-15 80.5
Msa0615780 MtrunA17_Chr3g0134951 27.119 177 98 1 809 954 583 759 8.51e-15 79.3
Msa0615780 MtrunA17_Chr4g0002331 27.322 183 100 3 808 957 708 890 1.63e-14 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615780 AT5G44790.1 71.568 1027 245 7 1 1009 1 998 0.0 1457
Msa0615780 AT1G63440.1 46.748 984 472 10 35 1009 47 987 0.0 859
Msa0615780 AT1G63440.1 29.825 171 111 3 19 189 109 270 5.80e-12 70.5
Msa0615780 AT5G21930.2 35.876 708 378 16 323 999 213 875 1.12e-116 380
Msa0615780 AT5G21930.1 35.876 708 378 16 323 999 213 875 1.12e-116 380
Msa0615780 AT4G33520.2 35.475 716 379 14 300 999 270 918 3.81e-109 362
Msa0615780 AT4G33520.3 35.475 716 379 14 300 999 270 918 6.89e-109 361
Msa0615780 AT5G21930.3 34.605 708 364 17 323 999 213 852 7.47e-105 348
Msa0615780 AT5G21930.4 34.969 652 344 17 323 943 213 815 3.46e-94 318
Msa0615780 AT4G30110.1 27.464 761 421 21 203 950 13 655 9.23e-69 249
Msa0615780 AT4G30110.2 27.464 761 421 21 203 950 13 655 9.23e-69 249
Msa0615780 AT2G19110.2 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0615780 AT2G19110.3 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0615780 AT2G19110.1 26.225 816 453 24 203 1000 23 707 1.45e-59 223
Msa0615780 AT4G30120.2 29.897 388 212 8 393 779 4 332 1.51e-40 154
Msa0615780 AT4G30120.1 26.471 578 319 16 203 779 19 491 6.55e-40 156
Msa0615780 AT4G37270.1 26.128 643 349 19 356 950 181 745 3.09e-31 132
Msa0615780 AT3G57330.2 25.167 600 346 18 439 957 184 761 1.21e-26 118
Msa0615780 AT3G57330.1 25.167 600 346 18 439 957 239 816 1.38e-26 118
Msa0615780 AT2G41560.2 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0615780 AT2G41560.3 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0615780 AT2G41560.4 24.918 610 350 18 433 957 131 717 4.94e-26 116
Msa0615780 AT2G41560.1 24.918 610 350 18 433 957 233 819 8.04e-26 115
Msa0615780 AT2G24520.3 23.761 585 343 15 437 968 113 647 5.14e-21 100
Msa0615780 AT2G24520.1 23.761 585 343 15 437 968 113 647 5.14e-21 100
Msa0615780 AT2G24520.2 23.761 585 343 15 437 968 176 710 6.36e-21 99.8
Msa0615780 AT1G07670.2 30.693 202 102 5 803 970 615 812 1.15e-19 95.9
Msa0615780 AT1G07670.1 30.693 202 102 5 803 970 615 812 1.15e-19 95.9
Msa0615780 AT1G07810.1 29.500 200 107 4 803 970 615 812 1.54e-19 95.5
Msa0615780 AT3G60330.4 22.997 574 333 16 437 954 134 654 7.82e-19 92.8
Msa0615780 AT3G60330.3 22.997 574 333 16 437 954 134 654 7.82e-19 92.8
Msa0615780 AT1G80660.2 21.622 592 335 17 427 954 4 530 1.22e-18 92.0
Msa0615780 AT3G60330.2 22.822 574 334 16 437 954 134 654 1.41e-18 92.0
Msa0615780 AT3G60330.1 22.822 574 334 16 437 954 134 654 1.41e-18 92.0
Msa0615780 AT1G80660.4 21.525 590 334 17 429 954 135 659 2.42e-18 91.3
Msa0615780 AT4G30190.1 21.635 587 337 18 429 954 130 654 2.65e-18 91.3
Msa0615780 AT1G80660.3 21.525 590 334 17 429 954 135 659 2.70e-18 91.3
Msa0615780 AT1G17260.1 21.579 570 341 16 439 954 144 661 3.01e-18 90.9
Msa0615780 AT1G80660.1 21.525 590 334 17 429 954 135 659 3.81e-18 90.9
Msa0615780 AT5G57350.4 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0615780 AT5G57350.2 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0615780 AT5G57350.1 22.034 590 331 17 429 954 131 655 3.86e-18 90.5
Msa0615780 AT4G00900.2 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0615780 AT4G00900.1 29.032 186 98 4 803 954 609 794 5.84e-18 90.1
Msa0615780 AT2G07560.1 21.843 586 336 19 429 954 133 656 8.11e-18 89.7
Msa0615780 AT5G62670.1 21.920 625 358 21 439 993 140 704 9.75e-18 89.4
Msa0615780 AT3G47950.1 21.890 635 346 20 439 993 144 708 2.77e-17 87.8
Msa0615780 AT3G47950.2 21.890 635 346 20 439 993 144 708 2.77e-17 87.8
Msa0615780 AT4G37640.1 30.168 179 96 3 810 959 649 827 6.22e-17 86.7
Msa0615780 AT4G29900.1 27.037 270 141 7 721 957 613 859 7.09e-17 86.7
Msa0615780 AT4G29900.2 27.037 270 141 7 721 957 613 859 7.09e-17 86.7
Msa0615780 AT3G63380.1 29.670 182 95 2 809 957 640 821 3.01e-16 84.7
Msa0615780 AT2G18960.3 21.331 586 340 18 429 954 66 590 3.34e-16 84.3
Msa0615780 AT2G18960.2 21.331 586 340 18 429 954 66 590 3.34e-16 84.3
Msa0615780 AT2G18960.1 21.331 586 340 18 429 954 130 654 4.01e-16 84.0
Msa0615780 AT2G22950.1 30.168 179 96 3 810 959 650 828 4.93e-16 84.0
Msa0615780 AT3G22910.1 30.769 182 93 4 809 957 636 817 5.91e-16 83.6
Msa0615780 AT5G57110.1 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0615780 AT5G57110.3 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0615780 AT5G57110.2 28.415 183 98 2 808 957 673 855 1.01e-15 82.8
Msa0615780 AT1G10130.1 27.684 177 97 1 809 954 582 758 1.13e-15 82.8
Msa0615780 AT2G24520.4 23.724 392 233 8 630 968 26 404 1.19e-15 82.4
Msa0615780 AT3G42640.1 21.392 589 336 18 429 954 133 657 5.21e-15 80.5
Msa0615780 AT3G21180.1 26.066 211 123 3 780 957 662 872 6.13e-15 80.5
Msa0615780 AT5G57350.3 23.969 388 212 10 630 954 26 393 2.44e-14 78.2

Find 268 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4_2:-65310001 Msa0615780:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4_2:-65310147 Msa0615780:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4_2:-65310076 Msa0615780:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4_2:+65307535 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4_2:-65307142 Msa0615780:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4_2:-65310397 Msa0615780:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4_2:-65310140 Msa0615780:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4_2:-65311133 Msa0615780:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4_2:+65309500 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4_2:+65310023 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4_2:-65307083 Msa0615780:CDS
CAAGTAAATTTACAATAAAT+TGG 0.253790 4_2:+65305955 None:intergenic
CTTGAGTCAGATAATTAATT+TGG 0.256617 4_2:-65309533 Msa0615780:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4_2:-65311115 Msa0615780:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4_2:-65308064 Msa0615780:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4_2:-65308090 Msa0615780:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4_2:-65310285 Msa0615780:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4_2:+65308033 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4_2:-65309699 Msa0615780:CDS
TCAAGGAAAATGCACAAAAT+TGG 0.305293 4_2:+65306021 None:intergenic
TGTGTTGATGAGAGATAATT+TGG 0.310034 4_2:-65306364 Msa0615780:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4_2:+65307471 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4_2:-65310088 Msa0615780:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4_2:-65309698 Msa0615780:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4_2:-65310320 Msa0615780:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4_2:+65311234 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4_2:+65307052 None:intergenic
CAAACTCATGTGTCCGTTCA+TGG 0.337981 4_2:-65305900 Msa0615780:three_prime_UTR
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4_2:-65310205 Msa0615780:CDS
AATACGAGAGAAAGGAAATA+AGG 0.342922 4_2:+65311893 None:intergenic
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4_2:-65308235 Msa0615780:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4_2:+65307577 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4_2:-65310087 Msa0615780:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4_2:+65311396 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4_2:-65310284 Msa0615780:CDS
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4_2:-65307956 Msa0615780:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4_2:+65310931 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4_2:-65310900 Msa0615780:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4_2:-65311273 Msa0615780:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4_2:-65310396 Msa0615780:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4_2:-65307141 Msa0615780:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4_2:-65307489 Msa0615780:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4_2:-65307058 Msa0615780:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4_2:-65307528 Msa0615780:CDS
CGACGGAATTAACCGGATTC+AGG 0.380567 4_2:-65311735 Msa0615780:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4_2:-65306207 Msa0615780:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4_2:-65310350 Msa0615780:CDS
AGGTCGGCATTCAAGATGTT+AGG 0.387627 4_2:-65306557 Msa0615780:CDS
AGCTGAGATCTTACATGAAC+CGG 0.387930 4_2:-65311430 Msa0615780:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4_2:+65308380 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4_2:-65310237 Msa0615780:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4_2:-65307927 Msa0615780:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4_2:-65310159 Msa0615780:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4_2:-65307448 Msa0615780:intron
CGGACACATGAGTTTGTTCA+TGG 0.400250 4_2:+65305907 None:intergenic
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4_2:-65311074 Msa0615780:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4_2:-65310204 Msa0615780:CDS
GGTTTCAACCGGACCTAAAC+CGG 0.406822 4_2:-65311409 Msa0615780:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4_2:-65309671 Msa0615780:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4_2:+65308161 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4_2:+65309997 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4_2:-65308091 Msa0615780:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4_2:+65310354 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4_2:-65307048 Msa0615780:CDS
AAGAAGATTATTGTGTTTGG+TGG 0.427442 4_2:+65311982 None:intergenic
ATGAGTTTGTTCATGGAGAT+AGG 0.433842 4_2:+65305914 None:intergenic
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4_2:-65307267 Msa0615780:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4_2:+65310932 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4_2:-65306254 Msa0615780:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4_2:+65309778 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4_2:+65306246 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4_2:+65311401 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4_2:-65307098 Msa0615780:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4_2:-65308128 Msa0615780:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4_2:+65309631 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4_2:-65307951 Msa0615780:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4_2:+65306117 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4_2:-65309619 Msa0615780:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4_2:-65310279 Msa0615780:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4_2:-65310925 Msa0615780:CDS
TTACATGAACCGGTTTCAAC+CGG 0.457960 4_2:-65311420 Msa0615780:CDS
GTCATTTAAAATTCCTTCAA+CGG 0.461784 4_2:+65311320 None:intergenic
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4_2:-65307184 Msa0615780:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4_2:+65306266 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4_2:-65311207 Msa0615780:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4_2:-65311130 Msa0615780:CDS
TCAACGACGACGGAATTAAC+CGG 0.465540 4_2:-65311742 Msa0615780:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4_2:-65311122 Msa0615780:CDS
GGTTTAGGTCCGGTTGAAAC+CGG 0.466163 4_2:+65311411 None:intergenic
GACTGTATCGGATCCTACTT+TGG 0.467006 4_2:+65309555 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4_2:-65311459 Msa0615780:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4_2:-65306423 Msa0615780:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4_2:-65306196 Msa0615780:CDS
GATTGGATTATTTGAGATGG+AGG 0.472917 4_2:+65312042 None:intergenic
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4_2:+65311811 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4_2:-65310938 Msa0615780:CDS
CACAATGTTATTGACGCCTC+AGG 0.477200 4_2:-65305832 Msa0615780:three_prime_UTR
CGGTGATTCTGACCTGAATC+CGG 0.483249 4_2:+65311723 None:intergenic
AAGTATTGTGGCCGTGCTCT+TGG 0.485752 4_2:-65309458 Msa0615780:CDS
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4_2:-65311007 Msa0615780:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4_2:-65310328 Msa0615780:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4_2:+65307171 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4_2:-65310342 Msa0615780:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4_2:-65311089 Msa0615780:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4_2:-65308133 Msa0615780:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4_2:-65307065 Msa0615780:CDS
ACAGATTGGATTATTTGAGA+TGG 0.496441 4_2:+65312039 None:intergenic
CGGATTCAGGTCAGAATCAC+CGG 0.498291 4_2:-65311722 Msa0615780:CDS
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4_2:-65311090 Msa0615780:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4_2:-65306255 Msa0615780:CDS
CGTTATTACTTTGGAGATGT+GGG 0.506990 4_2:-65310341 Msa0615780:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4_2:-65306253 Msa0615780:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4_2:-65306435 Msa0615780:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4_2:+65309501 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4_2:+65308124 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4_2:-65307082 Msa0615780:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4_2:+65306272 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4_2:-65308007 Msa0615780:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4_2:+65311814 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4_2:-65306417 Msa0615780:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4_2:+65307006 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4_2:-65307224 Msa0615780:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4_2:-65308097 Msa0615780:CDS
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4_2:-65311121 Msa0615780:CDS
TACATTTGAACAATGAGTGC+AGG 0.518273 4_2:+65305988 None:intergenic
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4_2:-65307561 Msa0615780:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4_2:-65309568 Msa0615780:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4_2:-65306537 Msa0615780:CDS
TTGTTCATGGAGATAGGTAG+AGG 0.521805 4_2:+65305920 None:intergenic
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4_2:-65306532 Msa0615780:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4_2:+65307158 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4_2:-65308107 Msa0615780:CDS
GGACATGAGAGCGGCTTCAA+CGG 0.527618 4_2:+65311673 None:intergenic
TGCTGTTTCACCATCTCCAT+CGG 0.527914 4_2:-65311952 Msa0615780:five_prime_UTR
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4_2:+65306522 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4_2:-65308089 Msa0615780:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4_2:-65307993 Msa0615780:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4_2:+65310355 None:intergenic
TAAGGAAGATGTATTTAAAG+AGG 0.531880 4_2:+65311911 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4_2:-65310304 Msa0615780:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4_2:-65308035 Msa0615780:CDS
GCAAGCGGCGCATGTCATGC+CGG 0.533829 4_2:+65311703 None:intergenic
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4_2:+65309572 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4_2:+65310044 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4_2:-65309524 Msa0615780:CDS
AAGTGGAAGGTGATACAGAT+TGG 0.537914 4_2:+65312025 None:intergenic
AAAGAGTAGTAACTTACAAA+GGG 0.538032 4_2:-65306070 Msa0615780:three_prime_UTR
AACAGATATAGAAAACATAA+GGG 0.538427 4_2:+65308162 None:intergenic
GCCGCTCTCATGTCCGTCGA+CGG 0.539449 4_2:-65311665 Msa0615780:CDS
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4_2:-65310395 Msa0615780:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4_2:-65311812 Msa0615780:CDS
TAAAGAGTAGTAACTTACAA+AGG 0.541634 4_2:-65306071 Msa0615780:three_prime_UTR
GAGTATATGAATGGGATATG+AGG 0.542597 4_2:+65310363 None:intergenic
ATTGGATTATTTGAGATGGA+GGG 0.543204 4_2:+65312043 None:intergenic
CATTCAAGATGTTAGGGCAG+AGG 0.545262 4_2:-65306550 Msa0615780:CDS
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4_2:-65307097 Msa0615780:CDS
GGTCGGCATTCAAGATGTTA+GGG 0.547169 4_2:-65306556 Msa0615780:CDS
TACAAAGGGTGCAAATGAGT+TGG 0.547463 4_2:-65306056 Msa0615780:three_prime_UTR
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4_2:-65306214 Msa0615780:CDS
ATGAGGTGAATACGAGAGAA+AGG 0.547814 4_2:+65311885 None:intergenic
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4_2:-65307247 Msa0615780:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4_2:-65307023 Msa0615780:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4_2:+65309681 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4_2:-65306289 Msa0615780:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4_2:+65309591 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4_2:+65311833 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4_2:-65306484 Msa0615780:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4_2:-65307966 Msa0615780:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4_2:+65307554 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4_2:-65311824 Msa0615780:CDS
ATTGTGGCCGTGCTCTTGGA+TGG 0.556931 4_2:-65309454 Msa0615780:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4_2:-65307483 Msa0615780:CDS
AGTGTATCTCATATGTGCGT+TGG 0.557667 4_2:-65305858 Msa0615780:three_prime_UTR
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4_2:-65306481 Msa0615780:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4_2:-65307625 Msa0615780:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4_2:-65307151 Msa0615780:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4_2:+65311390 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4_2:-65311333 Msa0615780:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4_2:+65306438 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4_2:-65307912 Msa0615780:intron
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4_2:-65307163 Msa0615780:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4_2:-65308061 Msa0615780:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4_2:+65311793 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4_2:-65307257 Msa0615780:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4_2:-65307484 Msa0615780:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4_2:-65310061 Msa0615780:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4_2:-65310311 Msa0615780:CDS
GTGCAGGCGAGAGGAGCTCA+AGG 0.573659 4_2:+65306004 None:intergenic
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4_2:-65307183 Msa0615780:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4_2:+65309753 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4_2:-65308361 Msa0615780:intron
TTGGAGCATACCCAGATGAA+TGG 0.578362 4_2:-65308216 Msa0615780:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4_2:-65307485 Msa0615780:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4_2:+65309700 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4_2:-65309712 Msa0615780:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4_2:+65311012 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4_2:-65307527 Msa0615780:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4_2:-65310223 Msa0615780:CDS
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4_2:-65306430 Msa0615780:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4_2:-65307020 Msa0615780:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4_2:+65309715 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4_2:+65307949 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4_2:-65309598 Msa0615780:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4_2:+65311805 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4_2:-65307924 Msa0615780:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4_2:-65311830 Msa0615780:CDS
TGCTGATTATGTAAGTATTG+TGG 0.591215 4_2:-65309470 Msa0615780:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4_2:+65306251 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4_2:-65309985 Msa0615780:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4_2:-65310060 Msa0615780:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4_2:-65306523 Msa0615780:CDS
TTCAACGGAGTTAGAGCAAG+CGG 0.598928 4_2:+65311688 None:intergenic
TGCACAAAATTGGAATCACA+AGG 0.599250 4_2:+65306031 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4_2:+65310318 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4_2:+65306198 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4_2:-65311088 Msa0615780:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4_2:-65309733 Msa0615780:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4_2:-65311405 Msa0615780:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4_2:-65306474 Msa0615780:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4_2:-65307140 Msa0615780:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4_2:-65306416 Msa0615780:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4_2:-65311394 Msa0615780:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4_2:-65309641 Msa0615780:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4_2:-65309616 Msa0615780:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4_2:+65310196 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4_2:-65308079 Msa0615780:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4_2:+65306222 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4_2:-65310310 Msa0615780:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4_2:-65307254 Msa0615780:CDS
TGTTCATGGAGATAGGTAGA+GGG 0.634625 4_2:+65305921 None:intergenic
TTTCAATAGAAACCTCGTCA+AGG 0.635047 4_2:-65311594 Msa0615780:intron
GAACAATGAGTGCAGGCGAG+AGG 0.636024 4_2:+65305995 None:intergenic
GGCTTGAATTACACCGTCGA+CGG 0.636046 4_2:+65311652 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4_2:+65309699 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4_2:-65311372 Msa0615780:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4_2:+65309543 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4_2:+65310867 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4_2:+65307964 None:intergenic
AAGACAGGAACTCTAACTCA+GGG 0.647613 4_2:-65307992 Msa0615780:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4_2:-65310394 Msa0615780:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4_2:-65311387 Msa0615780:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4_2:+65311604 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4_2:+65306201 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4_2:-65307462 Msa0615780:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4_2:-65309664 Msa0615780:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4_2:-65306215 Msa0615780:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4_2:-65310059 Msa0615780:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4_2:+65307927 None:intergenic
ATTAGCGTTAAACCTTGACG+AGG 0.671055 4_2:+65311582 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4_2:+65311045 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4_2:-65311083 Msa0615780:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4_2:-65311369 Msa0615780:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4_2:-65306480 Msa0615780:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4_2:+65308125 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4_2:-65307944 Msa0615780:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4_2:-65311355 Msa0615780:CDS
AACGTGGAAGATAGAACCTG+AGG 0.692439 4_2:+65305816 None:intergenic
GACACCAACTGCTGTCATGG+TGG 0.692490 4_2:-65308104 Msa0615780:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4_2:+65311664 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4_2:+65308100 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4_2:+65306236 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4_2:-65309697 Msa0615780:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4_2:+65307491 None:intergenic
GCACAAAATTGGAATCACAA+GGG 0.719506 4_2:+65306032 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4_2:-65307524 Msa0615780:CDS
GAGAGAGAGAAAATGCGATG+AGG 0.723306 4_2:+65311868 None:intergenic
ACTTCAACCAATCATCCATG+AGG 0.728611 4_2:+65310313 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4_2:-65311391 Msa0615780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4_2:65309616-65309635 Msa0615780:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4_2:65310884-65310903 Msa0615780:CDS 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG + chr4_2:65308062-65308081 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4_2:65309266-65309285 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4_2:65310473-65310492 Msa0615780:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4_2:65310888-65310907 Msa0615780:CDS 15.0%
!! CAAGTAAATTTACAATAAAT+TGG + chr4_2:65311919-65311938 None:intergenic 15.0%
!! AAAAAGAAGATTATTGTGTT+TGG + chr4_2:65305895-65305914 None:intergenic 20.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4_2:65307032-65307051 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4_2:65307047-65307066 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4_2:65307045-65307064 Msa0615780:CDS 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4_2:65307406-65307425 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4_2:65307407-65307426 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4_2:65307784-65307803 Msa0615780:intron 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG - chr4_2:65308066-65308085 Msa0615780:CDS 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4_2:65308824-65308843 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4_2:65308825-65308844 None:intergenic 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4_2:65308933-65308952 None:intergenic 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4_2:65309295-65309314 Msa0615780:intron 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4_2:65309712-65309731 None:intergenic 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4_2:65310135-65310154 None:intergenic 20.0%
!!! GTGTTTTGGTAAAATTTTTT+TGG - chr4_2:65310437-65310456 Msa0615780:intron 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4_2:65311240-65311259 Msa0615780:CDS 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4_2:65311241-65311260 Msa0615780:CDS 20.0%
!!! AATTTTTTAACGAAAGTGGA+AGG + chr4_2:65305862-65305881 None:intergenic 25.0%
! TAAGGAAGATGTATTTAAAG+AGG + chr4_2:65305963-65305982 None:intergenic 25.0%
!!! TTTGTTTTGAAGTAAAGCAA+CGG + chr4_2:65306246-65306265 None:intergenic 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4_2:65306351-65306370 Msa0615780:CDS 25.0%
! TGTTGAATTATTTAAACCCT+AGG - chr4_2:65306378-65306397 Msa0615780:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4_2:65306397-65306416 None:intergenic 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4_2:65306398-65306417 None:intergenic 25.0%
!! GTCATTTAAAATTCCTTCAA+CGG + chr4_2:65306554-65306573 None:intergenic 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4_2:65307033-65307052 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4_2:65307281-65307300 Msa0615780:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4_2:65307519-65307538 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4_2:65307520-65307539 None:intergenic 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4_2:65307521-65307540 Msa0615780:CDS 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4_2:65307783-65307802 Msa0615780:intron 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4_2:65307886-65307905 Msa0615780:intron 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4_2:65307932-65307951 Msa0615780:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4_2:65307935-65307954 Msa0615780:CDS 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4_2:65307936-65307955 Msa0615780:CDS 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4_2:65307976-65307995 None:intergenic 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4_2:65307987-65308006 Msa0615780:CDS 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4_2:65308200-65308219 Msa0615780:CDS 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4_2:65308338-65308357 Msa0615780:intron 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4_2:65308390-65308409 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4_2:65308391-65308410 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG + chr4_2:65308617-65308636 None:intergenic 25.0%
! CTGATACCATGTTAAAATTT+GGG + chr4_2:65308618-65308637 None:intergenic 25.0%
! TCTGATACCATGTTAAAATT+TGG + chr4_2:65308619-65308638 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4_2:65308823-65308842 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4_2:65309035-65309054 None:intergenic 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4_2:65309036-65309055 Msa0615780:intron 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4_2:65309216-65309235 None:intergenic 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4_2:65309301-65309320 Msa0615780:intron 25.0%
! ATAAACGTGAGTTTGAATTA+TGG + chr4_2:65309333-65309352 None:intergenic 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4_2:65309420-65309439 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4_2:65309429-65309448 Msa0615780:CDS 25.0%
! AAAATATGTACACAGAAGTA+AGG + chr4_2:65309605-65309624 None:intergenic 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4_2:65309627-65309646 Msa0615780:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4_2:65309628-65309647 Msa0615780:CDS 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4_2:65309713-65309732 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4_2:65309713-65309732 Msa0615780:CDS 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4_2:65309864-65309883 Msa0615780:intron 25.0%
!! GTTTTATGTCTTTTATAGCT+GGG + chr4_2:65310063-65310082 None:intergenic 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4_2:65310064-65310083 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4_2:65310125-65310144 Msa0615780:CDS 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4_2:65310338-65310357 None:intergenic 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4_2:65310339-65310358 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4_2:65310344-65310363 Msa0615780:CDS 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4_2:65310487-65310506 Msa0615780:intron 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4_2:65310539-65310558 Msa0615780:intron 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4_2:65311071-65311090 Msa0615780:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4_2:65311114-65311133 Msa0615780:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4_2:65311294-65311313 Msa0615780:CDS 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4_2:65311582-65311601 Msa0615780:intron 25.0%
! TAAAGAGTAGTAACTTACAA+AGG - chr4_2:65311800-65311819 Msa0615780:CDS 25.0%
! AAAGAGTAGTAACTTACAAA+GGG - chr4_2:65311801-65311820 Msa0615780:CDS 25.0%
! ATTGGATTATTTGAGATGGA+GGG + chr4_2:65305831-65305850 None:intergenic 30.0%
ACAGATTGGATTATTTGAGA+TGG + chr4_2:65305835-65305854 None:intergenic 30.0%
!!! CAGCAATTTTTTAACGAAAG+TGG + chr4_2:65305866-65305885 None:intergenic 30.0%
AAGAAGATTATTGTGTTTGG+TGG + chr4_2:65305892-65305911 None:intergenic 30.0%
! AGAAAAAAGAGTTTTTCCGA+TGG + chr4_2:65305938-65305957 None:intergenic 30.0%
AATACGAGAGAAAGGAAATA+AGG + chr4_2:65305981-65306000 None:intergenic 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4_2:65306103-65306122 None:intergenic 30.0%
! GGAATTTTAAATGACATCAC+CGG - chr4_2:65306559-65306578 Msa0615780:intron 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4_2:65306715-65306734 Msa0615780:intron 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4_2:65306716-65306735 Msa0615780:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4_2:65306717-65306736 Msa0615780:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4_2:65307165-65307184 Msa0615780:CDS 30.0%
TTATGGAGCATAAAATTCTG+TGG + chr4_2:65307240-65307259 None:intergenic 30.0%
! ACAGAATTTTATGCTCCATA+AGG - chr4_2:65307239-65307258 Msa0615780:CDS 30.0%
! CAGAATTTTATGCTCCATAA+GGG - chr4_2:65307240-65307259 Msa0615780:CDS 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4_2:65307283-65307302 None:intergenic 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4_2:65307648-65307667 Msa0615780:intron 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4_2:65307795-65307814 Msa0615780:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4_2:65307937-65307956 Msa0615780:CDS 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4_2:65307971-65307990 Msa0615780:CDS 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4_2:65308135-65308154 None:intergenic 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4_2:65308347-65308366 Msa0615780:intron 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4_2:65308401-65308420 Msa0615780:CDS 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4_2:65308495-65308514 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG - chr4_2:65308752-65308771 Msa0615780:intron 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4_2:65308799-65308818 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4_2:65308865-65308884 None:intergenic 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4_2:65309005-65309024 Msa0615780:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4_2:65309011-65309030 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4_2:65309065-65309084 None:intergenic 30.0%
AAATATTGTTCTGACTCTAC+GGG + chr4_2:65309215-65309234 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4_2:65309307-65309326 None:intergenic 30.0%
CATTATTGACACTATTGTGT+TGG - chr4_2:65309510-65309529 Msa0615780:CDS 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4_2:65309629-65309648 Msa0615780:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4_2:65309684-65309703 None:intergenic 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4_2:65310172-65310191 Msa0615780:CDS 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4_2:65310187-65310206 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4_2:65310297-65310316 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4_2:65310343-65310362 Msa0615780:CDS 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4_2:65310647-65310666 Msa0615780:intron 30.0%
GAAATATATACAAACCTCCT+TGG + chr4_2:65310868-65310887 None:intergenic 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4_2:65310924-65310943 Msa0615780:CDS 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4_2:65311035-65311054 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4_2:65311113-65311132 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4_2:65311269-65311288 Msa0615780:CDS 30.0%
!!! AAATGTGTTTTTTGACAGGT+CGG - chr4_2:65311298-65311317 Msa0615780:CDS 30.0%
! CAACTATACTACCATCTTTT+TGG + chr4_2:65311384-65311403 None:intergenic 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4_2:65311507-65311526 Msa0615780:intron 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4_2:65311757-65311776 None:intergenic 30.0%
TCAAGGAAAATGCACAAAAT+TGG + chr4_2:65311853-65311872 None:intergenic 30.0%
! AGTTCATTTTAAGCCATGAA+CGG + chr4_2:65311987-65312006 None:intergenic 30.0%
! GATTGGATTATTTGAGATGG+AGG + chr4_2:65305832-65305851 None:intergenic 35.0%
! TTTTCTCTCTCTCGAAATCA+TGG - chr4_2:65306013-65306032 Msa0615780:three_prime_UTR 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4_2:65306041-65306060 None:intergenic 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4_2:65306041-65306060 Msa0615780:three_prime_UTR 35.0%
GTTTCTATTGAAAACGACGT+CGG + chr4_2:65306270-65306289 None:intergenic 35.0%
TTTCAATAGAAACCTCGTCA+AGG - chr4_2:65306277-65306296 Msa0615780:CDS 35.0%
AAGAATGCAATTGAAGATGC+AGG - chr4_2:65306412-65306431 Msa0615780:CDS 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4_2:65306640-65306659 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4_2:65306664-65306683 Msa0615780:intron 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4_2:65306772-65306791 Msa0615780:intron 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4_2:65306781-65306800 Msa0615780:intron 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4_2:65306782-65306801 Msa0615780:intron 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4_2:65306783-65306802 Msa0615780:intron 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4_2:65306829-65306848 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4_2:65306862-65306881 None:intergenic 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4_2:65306864-65306883 Msa0615780:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4_2:65307164-65307183 Msa0615780:CDS 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4_2:65307212-65307231 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG + chr4_2:65307257-65307276 None:intergenic 35.0%
CACAAATCAATGCAAAAGCA+TGG + chr4_2:65307439-65307458 None:intergenic 35.0%
GAGTATATGAATGGGATATG+AGG + chr4_2:65307511-65307530 None:intergenic 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4_2:65307529-65307548 Msa0615780:CDS 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4_2:65307530-65307549 Msa0615780:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4_2:65307586-65307605 Msa0615780:CDS 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4_2:65307587-65307606 Msa0615780:CDS 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4_2:65307592-65307611 Msa0615780:CDS 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4_2:65307811-65307830 Msa0615780:intron 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4_2:65307851-65307870 None:intergenic 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4_2:65308096-65308115 None:intergenic 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4_2:65308302-65308321 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4_2:65308303-65308322 Msa0615780:intron 35.0%
TATCTGACTCAAGACTGTAT+CGG + chr4_2:65308331-65308350 None:intergenic 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4_2:65308382-65308401 None:intergenic 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4_2:65308427-65308446 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4_2:65308490-65308509 None:intergenic 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4_2:65308489-65308508 Msa0615780:intron 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4_2:65308546-65308565 Msa0615780:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4_2:65308593-65308612 None:intergenic 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG - chr4_2:65308609-65308628 Msa0615780:intron 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4_2:65308755-65308774 Msa0615780:intron 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4_2:65308797-65308816 Msa0615780:intron 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4_2:65308874-65308893 Msa0615780:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4_2:65308994-65309013 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4_2:65309052-65309071 Msa0615780:intron 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4_2:65309443-65309462 Msa0615780:CDS 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4_2:65309494-65309513 None:intergenic 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4_2:65309515-65309534 Msa0615780:CDS 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4_2:65309698-65309717 None:intergenic 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4_2:65309947-65309966 None:intergenic 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4_2:65309947-65309966 Msa0615780:intron 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4_2:65310110-65310129 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4_2:65310169-65310188 None:intergenic 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4_2:65310350-65310369 None:intergenic 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4_2:65310347-65310366 Msa0615780:CDS 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4_2:65310492-65310511 Msa0615780:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4_2:65310493-65310512 Msa0615780:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4_2:65310575-65310594 Msa0615780:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4_2:65310579-65310598 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4_2:65310730-65310749 Msa0615780:intron 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4_2:65310731-65310750 Msa0615780:intron 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4_2:65310773-65310792 Msa0615780:intron 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4_2:65310774-65310793 Msa0615780:intron 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4_2:65310822-65310841 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4_2:65310823-65310842 Msa0615780:intron 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4_2:65310964-65310983 None:intergenic 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4_2:65310965-65310984 Msa0615780:CDS 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4_2:65310973-65310992 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4_2:65310972-65310991 Msa0615780:CDS 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4_2:65311015-65311034 Msa0615780:CDS 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4_2:65311259-65311278 Msa0615780:CDS 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4_2:65311370-65311389 Msa0615780:CDS 35.0%
AGATGGTAGTATAGTTGCAA+TGG - chr4_2:65311387-65311406 Msa0615780:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4_2:65311608-65311627 None:intergenic 35.0%
GCACAAAATTGGAATCACAA+GGG + chr4_2:65311842-65311861 None:intergenic 35.0%
TGCACAAAATTGGAATCACA+AGG + chr4_2:65311843-65311862 None:intergenic 35.0%
TACATTTGAACAATGAGTGC+AGG + chr4_2:65311886-65311905 None:intergenic 35.0%
! ATGAGTTTGTTCATGGAGAT+AGG + chr4_2:65311960-65311979 None:intergenic 35.0%
AAGTGGAAGGTGATACAGAT+TGG + chr4_2:65305849-65305868 None:intergenic 40.0%
! AAGAGTTTTTCCGATGGAGA+TGG + chr4_2:65305932-65305951 None:intergenic 40.0%
ATGAGGTGAATACGAGAGAA+AGG + chr4_2:65305989-65306008 None:intergenic 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4_2:65306114-65306133 None:intergenic 40.0%
!!! GTTTTGAAGTAAAGCAACGG+AGG + chr4_2:65306243-65306262 None:intergenic 40.0%
ATTAGCGTTAAACCTTGACG+AGG + chr4_2:65306292-65306311 None:intergenic 40.0%
AGCTGAGATCTTACATGAAC+CGG - chr4_2:65306441-65306460 Msa0615780:CDS 40.0%
! TTACATGAACCGGTTTCAAC+CGG - chr4_2:65306451-65306470 Msa0615780:CDS 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4_2:65306477-65306496 Msa0615780:CDS 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4_2:65306573-65306592 Msa0615780:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4_2:65306598-65306617 Msa0615780:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4_2:65306724-65306743 Msa0615780:intron 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG - chr4_2:65306738-65306757 Msa0615780:intron 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG - chr4_2:65306741-65306760 Msa0615780:intron 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG - chr4_2:65306749-65306768 Msa0615780:intron 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG - chr4_2:65306750-65306769 Msa0615780:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4_2:65306942-65306961 None:intergenic 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4_2:65306943-65306962 None:intergenic 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4_2:65306971-65306990 Msa0615780:intron 40.0%
CATTCTACACTAACACCCTA+AGG + chr4_2:65307183-65307202 None:intergenic 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4_2:65307208-65307227 None:intergenic 40.0%
TGGAGCATAAAATTCTGTGG+AGG + chr4_2:65307237-65307256 None:intergenic 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4_2:65307485-65307504 None:intergenic 40.0%
AAATTACCCCCATGAAGAAG+AGG + chr4_2:65307486-65307505 None:intergenic 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4_2:65307556-65307575 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4_2:65307561-65307580 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4_2:65307560-65307579 Msa0615780:CDS 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4_2:65307561-65307580 Msa0615780:CDS 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4_2:65307634-65307653 Msa0615780:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4_2:65307667-65307686 Msa0615780:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4_2:65307712-65307731 Msa0615780:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4_2:65307810-65307829 Msa0615780:intron 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4_2:65307812-65307831 Msa0615780:intron 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4_2:65307877-65307896 None:intergenic 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4_2:65308121-65308140 None:intergenic 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4_2:65308138-65308157 Msa0615780:CDS 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4_2:65308193-65308212 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4_2:65308207-65308226 Msa0615780:CDS 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4_2:65308252-65308271 Msa0615780:intron 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4_2:65308255-65308274 Msa0615780:intron 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4_2:65308283-65308302 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4_2:65308491-65308510 None:intergenic 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4_2:65308488-65308507 Msa0615780:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4_2:65308527-65308546 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4_2:65308528-65308547 None:intergenic 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4_2:65308549-65308568 Msa0615780:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4_2:65308591-65308610 Msa0615780:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4_2:65308633-65308652 Msa0615780:intron 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4_2:65308634-65308653 Msa0615780:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4_2:65308790-65308809 None:intergenic 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4_2:65308787-65308806 Msa0615780:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4_2:65308884-65308903 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4_2:65308883-65308902 Msa0615780:intron 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4_2:65309140-65309159 Msa0615780:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4_2:65309157-65309176 Msa0615780:intron 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4_2:65309836-65309855 Msa0615780:intron 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4_2:65309878-65309897 Msa0615780:intron 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4_2:65309879-65309898 Msa0615780:intron 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4_2:65309944-65309963 Msa0615780:intron 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4_2:65309990-65310009 None:intergenic 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4_2:65309991-65310010 None:intergenic 40.0%
TGCGTATGCGACAATACAAA+AGG + chr4_2:65310025-65310044 None:intergenic 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4_2:65310103-65310122 None:intergenic 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4_2:65310107-65310126 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4_2:65310265-65310284 None:intergenic 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4_2:65310593-65310612 Msa0615780:intron 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4_2:65310597-65310616 Msa0615780:intron 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4_2:65310688-65310707 Msa0615780:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4_2:65310729-65310748 Msa0615780:intron 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4_2:65311020-65311039 Msa0615780:CDS 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4_2:65311021-65311040 Msa0615780:CDS 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4_2:65311087-65311106 None:intergenic 40.0%
TGGTAGTATAGTTGCAATGG+TGG - chr4_2:65311390-65311409 Msa0615780:CDS 40.0%
GGTAGTATAGTTGCAATGGT+GGG - chr4_2:65311391-65311410 Msa0615780:CDS 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4_2:65311602-65311621 None:intergenic 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4_2:65311638-65311657 None:intergenic 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4_2:65311637-65311656 Msa0615780:CDS 40.0%
! TACAAAGGGTGCAAATGAGT+TGG - chr4_2:65311815-65311834 Msa0615780:CDS 40.0%
TGTTCATGGAGATAGGTAGA+GGG + chr4_2:65311953-65311972 None:intergenic 40.0%
TTGTTCATGGAGATAGGTAG+AGG + chr4_2:65311954-65311973 None:intergenic 40.0%
AGTGTATCTCATATGTGCGT+TGG - chr4_2:65312013-65312032 Msa0615780:five_prime_UTR 40.0%
!! TGCTGTTTCACCATCTCCAT+CGG - chr4_2:65305919-65305938 Msa0615780:three_prime_UTR 45.0%
GAGAGAGAGAAAATGCGATG+AGG + chr4_2:65306006-65306025 None:intergenic 45.0%
AAAAACGACGTCAACGACGA+CGG - chr4_2:65306119-65306138 Msa0615780:CDS 45.0%
TCAACGACGACGGAATTAAC+CGG - chr4_2:65306129-65306148 Msa0615780:CDS 45.0%
TTCAACGGAGTTAGAGCAAG+CGG + chr4_2:65306186-65306205 None:intergenic 45.0%
! GTACTATCTCCAACCGGTTT+AGG + chr4_2:65306478-65306497 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4_2:65306581-65306600 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG - chr4_2:65306756-65306775 Msa0615780:intron 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4_2:65306788-65306807 Msa0615780:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4_2:65306933-65306952 Msa0615780:intron 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4_2:65306946-65306965 Msa0615780:intron 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4_2:65307007-65307026 None:intergenic 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4_2:65307474-65307493 Msa0615780:CDS 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4_2:65307475-65307494 Msa0615780:CDS 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4_2:65307476-65307495 Msa0615780:CDS 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4_2:65307484-65307503 None:intergenic 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4_2:65307567-65307586 Msa0615780:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4_2:65307666-65307685 Msa0615780:intron 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4_2:65307678-65307697 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4_2:65307731-65307750 Msa0615780:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4_2:65307870-65307889 Msa0615780:intron 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4_2:65308077-65308096 Msa0615780:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4_2:65308174-65308193 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4_2:65308175-65308194 None:intergenic 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4_2:65308173-65308192 Msa0615780:CDS 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4_2:65308174-65308193 Msa0615780:CDS 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4_2:65308230-65308249 Msa0615780:CDS 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4_2:65308243-65308262 None:intergenic 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4_2:65308273-65308292 Msa0615780:intron 45.0%
GACTGTATCGGATCCTACTT+TGG + chr4_2:65308319-65308338 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4_2:65308373-65308392 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_2:65308511-65308530 Msa0615780:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_2:65308520-65308539 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_2:65308521-65308540 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr4_2:65308584-65308603 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr4_2:65308581-65308600 Msa0615780:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG + chr4_2:65308663-65308682 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4_2:65308511-65308530 Msa0615780:intron 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4_2:65308520-65308539 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4_2:65308521-65308540 None:intergenic 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4_2:65308521-65308540 Msa0615780:intron 45.0%
! GAGCCTTATCTATCCGATGT+GGG + chr4_2:65308734-65308753 None:intergenic 45.0%
! AGAGCCTTATCTATCCGATG+TGG + chr4_2:65308735-65308754 None:intergenic 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4_2:65308785-65308804 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4_2:65308887-65308906 Msa0615780:intron 45.0%
TCTGTTGAATCCCTGTGACA+TGG - chr4_2:65308943-65308962 Msa0615780:intron 45.0%
CATTGCTAGTCCATGTCACA+GGG + chr4_2:65308956-65308975 None:intergenic 45.0%
ACATTGCTAGTCCATGTCAC+AGG + chr4_2:65308957-65308976 None:intergenic 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4_2:65308991-65309010 None:intergenic 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4_2:65309156-65309175 Msa0615780:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4_2:65309451-65309470 Msa0615780:CDS 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4_2:65309457-65309476 None:intergenic 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4_2:65309655-65309674 Msa0615780:CDS 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4_2:65309668-65309687 None:intergenic 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4_2:65309669-65309688 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4_2:65309669-65309688 Msa0615780:CDS 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4_2:65309841-65309860 None:intergenic 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4_2:65310264-65310283 None:intergenic 45.0%
GATGAGTCCTCTCTTACCAA+TGG - chr4_2:65310310-65310329 Msa0615780:CDS 45.0%
TTGGGATCCATTGGTAAGAG+AGG + chr4_2:65310320-65310339 None:intergenic 45.0%
!!! GGCATCATTTTGGGATCCAT+TGG + chr4_2:65310329-65310348 None:intergenic 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4_2:65310383-65310402 None:intergenic 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4_2:65310382-65310401 Msa0615780:CDS 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4_2:65310386-65310405 Msa0615780:CDS 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4_2:65310387-65310406 Msa0615780:CDS 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4_2:65310388-65310407 Msa0615780:CDS 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4_2:65310409-65310428 Msa0615780:intron 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4_2:65310423-65310442 Msa0615780:intron 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4_2:65310512-65310531 Msa0615780:intron 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4_2:65310604-65310623 Msa0615780:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4_2:65310687-65310706 Msa0615780:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4_2:65310716-65310735 None:intergenic 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4_2:65310720-65310739 Msa0615780:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4_2:65310788-65310807 Msa0615780:intron 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4_2:65310789-65310808 Msa0615780:intron 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4_2:65310806-65310825 Msa0615780:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4_2:65310813-65310832 Msa0615780:intron 45.0%
AGGTCGGCATTCAAGATGTT+AGG - chr4_2:65311314-65311333 Msa0615780:CDS 45.0%
GGTCGGCATTCAAGATGTTA+GGG - chr4_2:65311315-65311334 Msa0615780:CDS 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4_2:65311321-65311340 Msa0615780:CDS 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4_2:65311397-65311416 Msa0615780:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4_2:65311448-65311467 Msa0615780:CDS 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4_2:65311455-65311474 Msa0615780:CDS 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4_2:65311636-65311655 Msa0615780:CDS 45.0%
! CGGACACATGAGTTTGTTCA+TGG + chr4_2:65311967-65311986 None:intergenic 45.0%
CAAACTCATGTGTCCGTTCA+TGG - chr4_2:65311971-65311990 Msa0615780:five_prime_UTR 45.0%
CACAATGTTATTGACGCCTC+AGG - chr4_2:65312039-65312058 Msa0615780:five_prime_UTR 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4_2:65310225-65310244 Msa0615780:CDS 5.0%
CGACGGAATTAACCGGATTC+AGG - chr4_2:65306136-65306155 Msa0615780:CDS 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4_2:65306151-65306170 None:intergenic 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4_2:65306149-65306168 Msa0615780:CDS 50.0%
GGCTTGAATTACACCGTCGA+CGG + chr4_2:65306222-65306241 None:intergenic 50.0%
GGTTTAGGTCCGGTTGAAAC+CGG + chr4_2:65306463-65306482 None:intergenic 50.0%
GGTTTCAACCGGACCTAAAC+CGG - chr4_2:65306462-65306481 Msa0615780:CDS 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG + chr4_2:65306473-65306492 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4_2:65306484-65306503 None:intergenic 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4_2:65306484-65306503 Msa0615780:CDS 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4_2:65306499-65306518 Msa0615780:CDS 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4_2:65306538-65306557 Msa0615780:CDS 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4_2:65306576-65306595 Msa0615780:intron 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4_2:65306579-65306598 Msa0615780:intron 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG - chr4_2:65306797-65306816 Msa0615780:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4_2:65307477-65307496 Msa0615780:CDS 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4_2:65307551-65307570 Msa0615780:CDS 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4_2:65307724-65307743 Msa0615780:intron 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4_2:65308159-65308178 None:intergenic 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4_2:65308159-65308178 Msa0615780:CDS 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4_2:65308172-65308191 Msa0615780:CDS 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4_2:65308374-65308393 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4_2:65308413-65308432 Msa0615780:intron 50.0%
GCAATGCTCACCTTACAAGC+CGG - chr4_2:65308571-65308590 Msa0615780:intron 50.0%
GGTGCGTGAATAGGTTTAGG+CGG + chr4_2:65308660-65308679 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG + chr4_2:65308669-65308688 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4_2:65308777-65308796 Msa0615780:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4_2:65308889-65308908 None:intergenic 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4_2:65308886-65308905 Msa0615780:intron 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4_2:65308989-65309008 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4_2:65308990-65309009 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4_2:65309177-65309196 None:intergenic 50.0%
TAAGGAGCTCCAACGATCAG+GGG + chr4_2:65309248-65309267 None:intergenic 50.0%
GTAAGGAGCTCCAACGATCA+GGG + chr4_2:65309249-65309268 None:intergenic 50.0%
TGTAAGGAGCTCCAACGATC+AGG + chr4_2:65309250-65309269 None:intergenic 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4_2:65309738-65309757 Msa0615780:CDS 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4_2:65309743-65309762 Msa0615780:CDS 50.0%
TCGCCAAACCAAGTGCACAT+GGG + chr4_2:65309749-65309768 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4_2:65309781-65309800 Msa0615780:CDS 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4_2:65309792-65309811 Msa0615780:intron 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4_2:65309915-65309934 Msa0615780:intron 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4_2:65309920-65309939 Msa0615780:intron 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4_2:65309925-65309944 None:intergenic 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4_2:65309959-65309978 Msa0615780:intron 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4_2:65309975-65309994 Msa0615780:intron 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4_2:65310800-65310819 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4_2:65310803-65310822 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4_2:65311339-65311358 Msa0615780:CDS 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4_2:65311436-65311455 None:intergenic 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4_2:65311436-65311455 Msa0615780:CDS 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4_2:65311441-65311460 Msa0615780:CDS 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4_2:65311454-65311473 Msa0615780:CDS 50.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4_2:65311628-65311647 None:intergenic 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4_2:65311652-65311671 None:intergenic 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4_2:65311656-65311675 Msa0615780:CDS 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4_2:65311657-65311676 Msa0615780:CDS 50.0%
GCGAACATCTTCGAGATCGC+CGG + chr4_2:65306081-65306100 None:intergenic 55.0%
GGACATGAGAGCGGCTTCAA+CGG + chr4_2:65306201-65306220 None:intergenic 55.0%
TCAACCGGACCTAAACCGGT+TGG - chr4_2:65306466-65306485 Msa0615780:CDS 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4_2:65306480-65306499 Msa0615780:CDS 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4_2:65306502-65306521 Msa0615780:CDS 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4_2:65306516-65306535 Msa0615780:CDS 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4_2:65307543-65307562 Msa0615780:CDS 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4_2:65307830-65307849 None:intergenic 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4_2:65308417-65308436 Msa0615780:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4_2:65308676-65308695 Msa0615780:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4_2:65308976-65308995 Msa0615780:intron 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4_2:65308977-65308996 Msa0615780:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4_2:65309169-65309188 Msa0615780:intron 55.0%
GATGCCTTACCCCTGATCGT+TGG - chr4_2:65309236-65309255 Msa0615780:intron 55.0%
AGCTCCAACGATCAGGGGTA+AGG + chr4_2:65309243-65309262 None:intergenic 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4_2:65309636-65309655 Msa0615780:CDS 55.0%
GTCGCCAAACCAAGTGCACA+TGG + chr4_2:65309750-65309769 None:intergenic 55.0%
GACACCAACTGCTGTCATGG+TGG - chr4_2:65309767-65309786 Msa0615780:CDS 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4_2:65309774-65309793 None:intergenic 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4_2:65309774-65309793 Msa0615780:CDS 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4_2:65309780-65309799 Msa0615780:CDS 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4_2:65309782-65309801 Msa0615780:CDS 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4_2:65309905-65309924 Msa0615780:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4_2:65309910-65309929 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4_2:65309927-65309946 Msa0615780:intron 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4_2:65310614-65310633 Msa0615780:intron 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4_2:65310617-65310636 Msa0615780:intron 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4_2:65310624-65310643 Msa0615780:intron 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4_2:65310703-65310722 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4_2:65310708-65310727 Msa0615780:intron 55.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4_2:65310848-65310867 Msa0615780:intron 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4_2:65311352-65311371 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4_2:65311616-65311635 Msa0615780:CDS 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4_2:65311664-65311683 Msa0615780:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4_2:65311676-65311695 None:intergenic 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4_2:65311675-65311694 Msa0615780:CDS 55.0%
GAACAATGAGTGCAGGCGAG+AGG + chr4_2:65311879-65311898 None:intergenic 55.0%
CAACTAACTTCCACCGGCGC+CGG - chr4_2:65306047-65306066 Msa0615780:three_prime_UTR 60.0%
ACCGTCGACGGACATGAGAG+CGG + chr4_2:65306210-65306229 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4_2:65308675-65308694 Msa0615780:intron 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4_2:65308686-65308705 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4_2:65308684-65308703 Msa0615780:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4_2:65308685-65308704 Msa0615780:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4_2:65308686-65308705 Msa0615780:intron 60.0%
GGCGACACCAACTGCTGTCA+TGG - chr4_2:65309764-65309783 Msa0615780:CDS 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4_2:65310403-65310422 None:intergenic 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4_2:65310851-65310870 Msa0615780:intron 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4_2:65311334-65311353 Msa0615780:CDS 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4_2:65311348-65311367 Msa0615780:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4_2:65311617-65311636 Msa0615780:CDS 60.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4_2:65311623-65311642 None:intergenic 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4_2:65311673-65311692 None:intergenic 60.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4_2:65306069-65306088 None:intergenic 65.0%
GCAAGCGGCGCATGTCATGC+CGG + chr4_2:65306171-65306190 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG - chr4_2:65306206-65306225 Msa0615780:CDS 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4_2:65308681-65308700 None:intergenic 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4_2:65308683-65308702 Msa0615780:intron 65.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4_2:65308687-65308706 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4_2:65308687-65308706 Msa0615780:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4_2:65308695-65308714 Msa0615780:intron 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4_2:65308696-65308715 Msa0615780:intron 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4_2:65310246-65310265 Msa0615780:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4_2:65311618-65311637 Msa0615780:CDS 65.0%
GTGCAGGCGAGAGGAGCTCA+AGG + chr4_2:65311870-65311889 None:intergenic 65.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4_2:65306059-65306078 Msa0615780:three_prime_UTR 75.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4_2:65306060-65306079 None:intergenic 80.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4_2:65306063-65306082 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 65305821 65312072 65305821 ID=Msa0615780;Name=Msa0615780
chr4_2 mRNA 65305821 65312072 65305821 ID=Msa0615780-mRNA-1;Parent=Msa0615780;Name=Msa0615780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=211|0.87|0.88|1|1|1|9|280|1012
chr4_2 exon 65305821 65306577 65305821 ID=Msa0615780-mRNA-1:exon:18488;Parent=Msa0615780-mRNA-1
chr4_2 exon 65307021 65307278 65307021 ID=Msa0615780-mRNA-1:exon:18487;Parent=Msa0615780-mRNA-1
chr4_2 exon 65307449 65307646 65307449 ID=Msa0615780-mRNA-1:exon:18486;Parent=Msa0615780-mRNA-1
chr4_2 exon 65307913 65308255 65307913 ID=Msa0615780-mRNA-1:exon:18485;Parent=Msa0615780-mRNA-1
chr4_2 exon 65308362 65308420 65308362 ID=Msa0615780-mRNA-1:exon:18484;Parent=Msa0615780-mRNA-1
chr4_2 exon 65309423 65309808 65309423 ID=Msa0615780-mRNA-1:exon:18483;Parent=Msa0615780-mRNA-1
chr4_2 exon 65309986 65310415 65309986 ID=Msa0615780-mRNA-1:exon:18482;Parent=Msa0615780-mRNA-1
chr4_2 exon 65310873 65311493 65310873 ID=Msa0615780-mRNA-1:exon:18481;Parent=Msa0615780-mRNA-1
chr4_2 exon 65311595 65312072 65311595 ID=Msa0615780-mRNA-1:exon:18480;Parent=Msa0615780-mRNA-1
chr4_2 five_prime_UTR 65311862 65312072 65311862 ID=Msa0615780-mRNA-1:five_prime_utr;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65311595 65311861 65311595 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65310873 65311493 65310873 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65309986 65310415 65309986 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65309423 65309808 65309423 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65308362 65308420 65308362 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65307913 65308255 65307913 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65307449 65307646 65307449 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65307021 65307278 65307021 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 CDS 65306101 65306577 65306101 ID=Msa0615780-mRNA-1:cds;Parent=Msa0615780-mRNA-1
chr4_2 three_prime_UTR 65305821 65306100 65305821 ID=Msa0615780-mRNA-1:three_prime_utr;Parent=Msa0615780-mRNA-1
Gene Sequence

>Msa0615780

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAATTAACCGGATTCAGGTCAGAATCACCGGCATGACATGCGCCGCTTGCTCTAACTCCGTTGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTTGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTCGTCAAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAATGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTCGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>Msa0615780

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGINRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVSIVAVLLDGFYVLLLLNDSVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN*