AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0405200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405200 MtrunA17_Chr3g0093041 95.567 609 25 1 341 947 1 609 0.0 1214
Msa0405200 MtrunA17_Chr3g0132711 82.667 600 102 2 350 947 26 625 0.0 1036
Msa0405200 MtrunA17_Chr3g0093051 92.082 341 27 0 1 341 1 341 0.0 608
Msa0405200 MtrunA17_Chr3g0132721 77.126 341 78 0 1 341 1 341 1.23e-172 505
Msa0405200 MtrunA17_Chr3g0093091 31.729 665 399 17 194 843 309 933 1.76e-85 295
Msa0405200 MtrunA17_Chr4g0060401 32.489 671 386 18 194 843 302 926 5.26e-85 293
Msa0405200 MtrunA17_Chr4g0060431 31.902 652 379 13 207 838 302 908 9.65e-84 290
Msa0405200 MtrunA17_Chr4g0060501 31.346 654 390 15 207 843 317 928 1.01e-82 287
Msa0405200 MtrunA17_Chr7g0257341 28.465 938 500 32 9 839 5 878 2.59e-76 274
Msa0405200 MtrunA17_Chr7g0257341 26.958 779 465 24 10 742 968 1688 8.44e-55 208
Msa0405200 MtrunA17_Chr4g0060421 34.908 487 272 13 361 843 3 448 1.82e-72 246
Msa0405200 MtrunA17_Chr4g0060471 41.554 296 155 6 549 842 1 280 2.57e-64 218
Msa0405200 MtrunA17_Chr3g0130331 30.286 175 107 5 545 708 70 240 2.61e-18 90.1
Msa0405200 MtrunA17_Chr1g0202431 28.959 221 148 5 524 739 41 257 5.35e-18 89.0
Msa0405200 MtrunA17_Chr8g0384391 29.730 185 118 4 532 708 55 235 3.78e-16 83.2
Msa0405200 MtrunA17_Chr1g0198931 26.667 270 177 8 518 771 92 356 6.90e-16 82.4
Msa0405200 MtrunA17_Chr4g0041871 30.481 187 118 7 549 728 376 557 8.46e-15 79.3
Msa0405200 MtrunA17_Chr1g0200651 26.820 261 162 8 545 784 102 354 1.24e-14 78.2
Msa0405200 MtrunA17_Chr8g0393191 28.800 250 157 8 518 755 58 298 2.29e-14 77.8
Msa0405200 MtrunA17_Chr4g0039261 25.991 227 149 6 544 757 62 282 2.94e-14 77.0
Msa0405200 MtrunA17_Chr4g0050221 28.261 230 143 6 544 757 42 265 4.39e-14 76.6
Msa0405200 MtrunA17_Chr2g0318061 26.006 323 171 14 496 789 18 301 4.66e-14 75.1
Msa0405200 MtrunA17_Chr4g0065231 26.923 208 137 5 511 708 57 259 1.65e-13 74.7
Msa0405200 MtrunA17_Chr4g0050291 30.726 179 103 5 545 708 62 234 2.59e-13 73.9
Msa0405200 MtrunA17_Chr1g0199471 27.586 232 148 7 532 749 516 741 2.66e-13 74.3
Msa0405200 MtrunA17_Chr1g0178481 25.000 204 143 5 532 728 395 595 2.96e-13 73.9
Msa0405200 MtrunA17_Chr4g0050261 29.474 190 113 5 534 708 74 257 3.25e-13 73.9
Msa0405200 MtrunA17_Chr5g0411621 28.713 202 129 6 543 733 61 258 3.59e-13 73.6
Msa0405200 MtrunA17_Chr7g0264441 29.630 162 100 4 532 683 278 435 5.37e-13 73.2
Msa0405200 MtrunA17_Chr5g0408061 28.151 238 153 8 545 769 77 309 7.98e-13 72.4
Msa0405200 MtrunA17_Chr8g0359931 29.714 175 106 5 545 708 78 246 1.11e-12 72.0
Msa0405200 MtrunA17_Chr3g0102731 29.189 185 116 6 534 708 99 278 1.17e-12 71.6
Msa0405200 MtrunA17_Chr1g0180971 31.056 161 99 4 532 683 412 569 1.30e-12 72.0
Msa0405200 MtrunA17_Chr2g0316301 27.727 220 136 9 551 752 91 305 2.50e-12 70.9
Msa0405200 MtrunA17_Chr6g0477811 24.542 273 183 7 548 803 81 347 5.61e-12 69.7
Msa0405200 MtrunA17_Chr4g0039251 25.000 196 128 6 545 727 105 294 6.32e-12 69.7
Msa0405200 MtrunA17_Chr4g0050251 29.474 190 113 6 534 708 74 257 6.37e-12 69.7
Msa0405200 MtrunA17_Chr5g0446901 28.495 186 120 5 534 708 110 293 7.74e-12 69.3
Msa0405200 MtrunA17_Chr4g0028621 32.298 161 89 5 532 679 506 659 8.21e-12 69.7
Msa0405200 MtrunA17_Chr1g0176451 24.275 276 173 9 545 788 35 306 2.13e-11 67.8
Msa0405200 MtrunA17_Chr1g0176441 25.837 209 140 6 544 741 182 386 2.44e-11 67.8
Msa0405200 MtrunA17_Chr1g0213091 27.143 210 137 6 545 742 134 339 3.15e-11 67.4
Msa0405200 MtrunA17_Chr7g0262221 31.016 187 112 6 534 708 855 1036 5.87e-11 67.0
Msa0405200 MtrunA17_Chr1g0156821 23.982 221 158 5 547 761 1025 1241 6.11e-11 66.6
Msa0405200 MtrunA17_Chr7g0263351 27.143 210 135 6 545 741 139 343 6.96e-11 66.2
Msa0405200 MtrunA17_Chr4g0060411 32.258 155 102 3 194 346 293 446 7.66e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405200 AT3G47730.1 65.453 961 302 8 1 938 3 956 0.0 1308
Msa0405200 AT5G61690.2 62.278 957 334 8 1 937 3 952 0.0 1197
Msa0405200 AT5G61690.1 61.755 957 338 9 1 937 3 951 0.0 1182
Msa0405200 AT5G61730.2 61.835 959 328 9 1 937 3 945 0.0 1176
Msa0405200 AT5G61730.1 61.001 959 326 10 1 937 3 935 0.0 1150
Msa0405200 AT5G61700.1 30.534 655 386 15 207 843 308 911 5.94e-88 301
Msa0405200 AT3G47790.1 30.101 794 470 21 79 842 163 901 1.92e-83 288
Msa0405200 AT3G47780.1 30.909 660 380 15 207 843 323 929 3.78e-83 288
Msa0405200 AT5G61740.3 30.229 655 383 13 207 843 166 764 4.92e-82 282
Msa0405200 AT5G61740.2 30.229 655 383 13 207 843 271 869 3.04e-81 282
Msa0405200 AT5G61740.1 30.229 655 383 13 207 843 305 903 6.83e-81 281
Msa0405200 AT3G47750.1 30.402 671 395 15 194 843 312 931 2.73e-78 275
Msa0405200 AT3G47740.1 30.640 656 384 17 207 843 323 926 7.15e-77 271
Msa0405200 AT3G47760.3 30.211 662 382 17 207 843 324 930 9.67e-76 268
Msa0405200 AT2G41700.1 34.652 632 326 21 242 839 295 873 3.72e-75 271
Msa0405200 AT2G41700.1 32.190 525 291 15 245 742 1197 1683 1.32e-60 226
Msa0405200 AT3G47770.1 30.091 658 382 15 207 840 294 897 6.04e-75 265
Msa0405200 AT3G47770.2 30.091 658 382 15 207 840 320 923 9.79e-75 265
Msa0405200 AT3G47760.1 30.060 662 377 19 207 843 290 890 2.76e-74 263
Msa0405200 AT3G47760.2 29.833 657 361 20 207 843 324 900 8.63e-69 247
Msa0405200 AT2G41700.2 34.568 567 298 18 297 839 276 793 2.13e-68 250
Msa0405200 AT2G41700.2 30.159 567 305 16 245 753 1119 1652 8.71e-57 214
Msa0405200 AT5G61700.2 30.097 515 313 11 207 707 308 789 3.43e-65 235
Msa0405200 AT5G61700.4 30.097 515 313 11 207 707 308 789 3.43e-65 235
Msa0405200 AT3G47790.2 29.590 659 395 20 79 708 44 662 1.62e-62 225
Msa0405200 AT3G47790.3 29.590 659 395 20 79 708 163 781 3.77e-62 226
Msa0405200 AT5G61700.3 25.400 437 281 10 207 631 308 711 2.84e-36 147
Msa0405200 AT3G47770.3 23.741 417 258 10 207 602 320 697 1.70e-19 94.4
Msa0405200 AT4G25750.1 33.161 193 114 8 544 728 41 226 1.95e-18 90.5
Msa0405200 AT2G13610.1 32.979 188 108 8 532 708 61 241 2.56e-18 90.5
Msa0405200 AT5G52860.1 29.208 202 133 6 530 726 41 237 1.46e-16 84.7
Msa0405200 AT3G13220.1 24.483 290 185 8 532 791 105 390 5.44e-15 80.1
Msa0405200 AT1G53270.1 29.798 198 114 8 545 726 62 250 1.28e-14 78.6
Msa0405200 AT4G27420.1 26.752 314 204 13 520 811 53 362 1.30e-14 78.6
Msa0405200 AT1G65410.1 28.182 220 132 7 532 728 98 314 2.20e-14 76.3
Msa0405200 AT1G51500.1 26.383 235 142 8 544 761 55 275 2.97e-14 77.8
Msa0405200 AT2G37010.2 28.452 239 154 7 532 757 499 733 3.14e-14 77.8
Msa0405200 AT2G37010.1 28.452 239 154 7 532 757 499 733 3.14e-14 77.8
Msa0405200 AT1G51460.1 30.000 180 102 6 544 708 41 211 1.11e-13 75.9
Msa0405200 AT1G67940.1 24.623 199 141 6 534 728 45 238 2.45e-13 71.6
Msa0405200 AT3G21090.1 25.381 197 128 6 544 727 56 246 2.62e-13 74.7
Msa0405200 AT3G25620.2 26.642 274 178 10 545 804 111 375 3.01e-13 74.3
Msa0405200 AT3G25620.1 26.642 274 178 10 545 804 111 375 7.07e-13 72.4
Msa0405200 AT5G06530.2 27.358 212 139 6 534 734 180 387 1.25e-12 72.4
Msa0405200 AT5G06530.1 27.358 212 139 6 534 734 180 387 1.25e-12 72.4
Msa0405200 AT5G06530.3 27.358 212 139 6 534 734 180 387 1.36e-12 72.4
Msa0405200 AT1G17840.1 25.726 241 156 7 532 757 68 300 1.59e-12 72.0
Msa0405200 AT3G55110.1 30.806 211 131 7 545 743 103 310 3.05e-12 71.2
Msa0405200 AT4G15236.1 29.213 178 113 5 541 708 825 999 3.92e-12 71.2
Msa0405200 AT1G31770.1 29.885 174 109 4 544 708 92 261 6.18e-12 70.1
Msa0405200 AT5G60740.1 30.128 156 99 3 532 679 514 667 6.58e-12 70.5
Msa0405200 AT1G27940.2 24.390 205 135 6 535 728 809 1004 6.68e-12 70.5
Msa0405200 AT1G27940.2 23.106 264 170 7 491 742 143 385 2.14e-11 68.6
Msa0405200 AT5G06530.4 28.571 196 125 6 550 734 1 192 6.80e-12 69.7
Msa0405200 AT4G15233.8 29.213 178 113 5 541 708 818 992 9.15e-12 70.1
Msa0405200 AT4G15233.3 29.213 178 113 5 541 708 765 939 9.21e-12 70.1
Msa0405200 AT4G15233.6 29.213 178 113 5 541 708 765 939 9.21e-12 70.1
Msa0405200 AT4G15233.7 29.213 178 113 5 541 708 809 983 9.22e-12 70.1
Msa0405200 AT4G15233.2 29.213 178 113 5 541 708 827 1001 9.47e-12 70.1
Msa0405200 AT4G15233.5 29.213 178 113 5 541 708 684 858 1.00e-11 69.7
Msa0405200 AT4G15233.4 29.213 178 113 5 541 708 684 858 1.00e-11 69.7
Msa0405200 AT4G15233.1 29.213 178 113 5 541 708 827 1001 1.01e-11 69.7
Msa0405200 AT1G27940.1 24.537 216 143 6 535 739 1023 1229 1.03e-11 69.7
Msa0405200 AT1G27940.1 23.106 264 170 7 491 742 357 599 2.44e-11 68.6
Msa0405200 AT1G53390.1 28.824 170 108 4 549 708 539 705 1.40e-11 69.3
Msa0405200 AT5G19410.2 24.757 206 136 7 544 733 86 288 1.92e-11 68.6
Msa0405200 AT5G19410.1 24.757 206 136 7 544 733 77 279 1.95e-11 68.6
Msa0405200 AT3G55100.1 26.263 198 130 5 543 728 61 254 2.11e-11 68.6
Msa0405200 AT3G55100.2 26.263 198 130 5 543 728 61 254 2.11e-11 68.6
Msa0405200 AT3G55130.1 29.412 204 117 7 542 727 108 302 2.85e-11 68.2
Msa0405200 AT1G28010.1 23.767 223 152 5 530 742 386 600 3.93e-11 67.8
Msa0405200 AT2G26910.1 32.353 204 110 10 541 726 853 1046 5.29e-11 67.4
Msa0405200 AT2G37280.4 30.000 180 109 6 541 708 690 864 5.72e-11 67.4
Msa0405200 AT2G37280.3 30.000 180 109 6 541 708 877 1051 5.78e-11 67.4
Msa0405200 AT2G37280.1 30.000 180 109 6 541 708 848 1022 7.11e-11 67.0
Msa0405200 AT2G37360.1 25.506 247 152 8 518 741 112 349 7.22e-11 66.6
Msa0405200 AT2G37280.2 30.000 180 109 6 541 708 848 1022 7.78e-11 67.0
Msa0405200 AT3G53480.1 29.444 180 110 6 541 708 885 1059 8.77e-11 66.6

Find 230 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTACAGCATTGATTTA+TGG 0.123489 3_2:-39589457 Msa0405200:intron
TTCATCCAAAATGACTAATT+TGG 0.137012 3_2:+39588788 None:intergenic
ACTTTCTAAATCCTCGTTAT+TGG 0.150098 3_2:-39590567 Msa0405200:CDS
TTTGAGGAATATGAGCTTTC+TGG 0.153807 3_2:+39586927 None:intergenic
TGACCCCAAATTAGTCATTT+TGG 0.172803 3_2:-39588793 Msa0405200:CDS
TGATTCATGCTCAGTGATTT+TGG 0.177760 3_2:-39586806 Msa0405200:three_prime_UTR
TACCCCGGTATATTTAAATT+TGG 0.202872 3_2:-39590257 Msa0405200:CDS
TCAAACATTCGAAAGATTAT+TGG 0.207745 3_2:-39589406 Msa0405200:CDS
CACACATGCCTCCTTGTTAT+TGG 0.221179 3_2:+39588657 None:intergenic
GAACTCTTCTCTAGAATTAA+AGG 0.224002 3_2:-39589040 Msa0405200:CDS
CCTTTACAGCATTGATTTAT+GGG 0.249063 3_2:-39589456 Msa0405200:intron
TGTTCTCACAACACATTCTA+TGG 0.250657 3_2:-39588598 Msa0405200:CDS
GAAATCGCTAGGTTTCTTAT+TGG 0.252209 3_2:-39593723 Msa0405200:CDS
AAGTTATTGTTCTCCTCTTT+TGG 0.268745 3_2:+39588276 None:intergenic
TCATCCAAAATGACTAATTT+GGG 0.271209 3_2:+39588789 None:intergenic
CTGGTCATTACCGAGATTTA+TGG 0.288621 3_2:-39591040 Msa0405200:CDS
CTGTCTGAACTAACTTGATT+TGG 0.302323 3_2:+39586836 None:intergenic
CAAGATAGAAAAGAAGAATT+TGG 0.305480 3_2:-39587709 Msa0405200:CDS
TCCTCACAAGGTTTGATTGA+TGG 0.314934 3_2:+39594077 None:intergenic
TTCCTCACACCCATTTCATT+TGG 0.315266 3_2:+39590601 None:intergenic
TGATATTTATATACGGCTTC+TGG 0.316760 3_2:-39590674 Msa0405200:CDS
TGCCGTGTTATGATTTCATT+TGG 0.319017 3_2:-39594037 Msa0405200:CDS
GACAGAATGATATTTATATA+CGG 0.323292 3_2:-39590681 Msa0405200:intron
ATGGAAGTATTATTAGTTAT+GGG 0.329578 3_2:-39593839 Msa0405200:CDS
CAATATAATCCCAAATGAAA+TGG 0.332938 3_2:-39590611 Msa0405200:CDS
GATGCTGTGTCACCATTTGC+AGG 0.333293 3_2:+39588432 None:intergenic
ACCGGTACCCTTTGTATTGC+CGG 0.337280 3_2:-39586956 Msa0405200:CDS
TTCTCTACAGTTGGATCAAT+GGG 0.340505 3_2:-39592145 Msa0405200:CDS
AACACATTCCACTTGAAGTC+TGG 0.343527 3_2:+39592202 None:intergenic
AATGGAAGTATTATTAGTTA+TGG 0.344238 3_2:-39593840 Msa0405200:CDS
TGACGCAAATGTTGCTGTTC+AGG 0.344942 3_2:-39590300 Msa0405200:CDS
TCACCATGTTGAGTTCAAAT+AGG 0.347909 3_2:+39591408 None:intergenic
CATGAGGAATCACATAAGTT+AGG 0.353265 3_2:+39588253 None:intergenic
TCCTCACACCCATTTCATTT+GGG 0.358716 3_2:+39590602 None:intergenic
AGCATTGATTTATGGGAATT+CGG 0.359317 3_2:-39589449 Msa0405200:CDS
TTGAGGAATATGAGCTTTCT+GGG 0.364777 3_2:+39586928 None:intergenic
AGTGTTGCAATTGCACTTAT+CGG 0.365108 3_2:-39588816 Msa0405200:CDS
GCTATGTATGTGGGATTTCC+AGG 0.365207 3_2:-39587040 Msa0405200:CDS
ATCAGATTGAAGTCACGTTT+TGG 0.380754 3_2:-39588504 Msa0405200:CDS
CAGCTAACCCCGTTATCTTC+AGG 0.381965 3_2:+39590954 None:intergenic
CTTTGTCTATGGCGAAGATT+AGG 0.382631 3_2:+39594168 None:intergenic
CGTTCTTCAGATAAGTTCAT+TGG 0.383758 3_2:-39592086 Msa0405200:CDS
CGCCGGTCAGGGTCAGTTCA+TGG 0.391054 3_2:-39586872 Msa0405200:CDS
AAATTACTTTCAGGGCTTGT+GGG 0.395875 3_2:-39589709 Msa0405200:intron
CCTTTGCCATGATTCCTATA+CGG 0.397849 3_2:+39588553 None:intergenic
TCAAGGACGTCTTCATCATC+TGG 0.400264 3_2:+39590365 None:intergenic
TCACCATCTCCATCAGTTAC+TGG 0.400609 3_2:+39589597 None:intergenic
TATGTCGAGATGGAAGAATT+TGG 0.401224 3_2:-39586668 Msa0405200:three_prime_UTR
TTTCAACTCCTGAAGATAAC+GGG 0.402720 3_2:-39590962 Msa0405200:CDS
GTAACTTCCAGCTCTTACTT+TGG 0.403285 3_2:+39588863 None:intergenic
GTAGAGAAAGGAGCCATTCC+TGG 0.403530 3_2:+39592160 None:intergenic
CAAATTACTTTCAGGGCTTG+TGG 0.404244 3_2:-39589710 Msa0405200:intron
ATCTACAGTTTGATATCCTA+TGG 0.404903 3_2:-39589090 Msa0405200:intron
TTTCTCTACAGTTGGATCAA+TGG 0.405765 3_2:-39592146 Msa0405200:CDS
TTGGTGAGAGGAGTTGAAGA+AGG 0.406104 3_2:+39594204 None:intergenic
CACACAGTCATCGTCGTTAA+CGG 0.408573 3_2:+39590911 None:intergenic
ACTGCAAGACAACGCCGGTC+AGG 0.409291 3_2:-39586884 Msa0405200:CDS
GATTATATTGTCAAAGTAGA+TGG 0.409408 3_2:+39590624 None:intergenic
ATCCTATGGGAGGCTTTGTC+TGG 0.412790 3_2:-39589076 Msa0405200:CDS
TTTCTTGAATATTGCAAAGC+AGG 0.416432 3_2:-39587644 Msa0405200:CDS
ATTCTTATTTCTTAGACTAC+TGG 0.420871 3_2:-39588687 Msa0405200:intron
CTAAATCCTCGTTATTGGAC+AGG 0.423781 3_2:-39590562 Msa0405200:CDS
TCAACAATCGTACGAAACTT+TGG 0.430344 3_2:+39593999 None:intergenic
TGCTCCTTACCACGCTGTTA+AGG 0.432338 3_2:-39590210 Msa0405200:intron
ATGGAAGAATTTGGAGGGGA+AGG 0.434696 3_2:-39586659 Msa0405200:three_prime_UTR
AGAGAGAAGAGAGGTGAGGA+AGG 0.435967 3_2:+39594370 None:intergenic
GCAACCAAATTTAAATATAC+CGG 0.438025 3_2:+39590253 None:intergenic
CTCTGTTGTGTGAGGGAGAG+AGG 0.440106 3_2:+39594342 None:intergenic
AACTCTTCTCTAGAATTAAA+GGG 0.440828 3_2:-39589039 Msa0405200:CDS
TTTCATTCGTAAATCATCTT+CGG 0.441394 3_2:-39591248 Msa0405200:CDS
ACACTCAGGCCTTGAGCAAA+AGG 0.441420 3_2:+39590999 None:intergenic
CTGAAGATAACGGGGTTAGC+TGG 0.442106 3_2:-39590953 Msa0405200:CDS
ATTAGGAAAATGAAGAAGAT+TGG 0.447583 3_2:+39594185 None:intergenic
GGCTTTACGACTCTGCATAC+TGG 0.448998 3_2:-39591559 Msa0405200:CDS
GTGACTTTGACCTTGACATC+TGG 0.451578 3_2:-39587586 Msa0405200:CDS
AGGCCTTGAGCAAAAGGATT+AGG 0.453113 3_2:+39591005 None:intergenic
TGGAAGAATTTGGAGGGGAA+GGG 0.453395 3_2:-39586658 Msa0405200:three_prime_UTR
ACTGGTTATCATGGCTAACC+TGG 0.456830 3_2:-39591541 Msa0405200:CDS
CGCTCCGCAGCAAGCTGAAG+AGG 0.457165 3_2:+39593747 None:intergenic
ATCGCTAGGTTTCTTATTGG+AGG 0.460474 3_2:-39593720 Msa0405200:intron
TAGAGAAATACCTGTTGAAA+AGG 0.463474 3_2:-39593952 Msa0405200:CDS
AATATAATCCCAAATGAAAT+GGG 0.463808 3_2:-39590610 Msa0405200:CDS
AAGGGAAAGCTGCGCTGCAT+TGG 0.464105 3_2:-39588534 Msa0405200:CDS
CTTTCGAATGTTTGACATGC+CGG 0.464463 3_2:+39589414 None:intergenic
TATTTCTTAGACTACTGGTA+TGG 0.468191 3_2:-39588682 Msa0405200:intron
CACTTGTATATGTTGTCAGT+TGG 0.469578 3_2:-39586698 Msa0405200:three_prime_UTR
TTTAGATGTAGTACCAAAAG+AGG 0.471690 3_2:-39588289 Msa0405200:CDS
TTGACATGCCGGTAGAGCTT+CGG 0.474734 3_2:+39589425 None:intergenic
ACAGCTATTAGTTGTTTGAC+AGG 0.479657 3_2:-39589627 Msa0405200:CDS
CTAGAAAGTGCTGCAGCTGA+AGG 0.480749 3_2:-39587616 Msa0405200:CDS
TATATGTTGTCAGTTGGAAT+CGG 0.481518 3_2:-39586692 Msa0405200:three_prime_UTR
TCTCTTCTCTTAGTTCTCAC+TGG 0.490049 3_2:-39591494 Msa0405200:CDS
TATTCAGTAGACTCTGATCC+TGG 0.491964 3_2:+39587022 None:intergenic
GGATAGGCAATGACCGTGAT+GGG 0.492293 3_2:-39591581 Msa0405200:intron
CAAGGTTTGATTGATGGAGA+TGG 0.493575 3_2:+39594083 None:intergenic
AAGAATTTGGAGGGGAAGGG+AGG 0.496014 3_2:-39586655 Msa0405200:three_prime_UTR
TTGCAGTAGCAGATGGTAGT+TGG 0.501869 3_2:+39586900 None:intergenic
AATTCGGTCCGAAGCTCTAC+CGG 0.502704 3_2:-39589433 Msa0405200:CDS
ATGAGCTTTCTGGGAGTGGC+CGG 0.502830 3_2:+39586937 None:intergenic
ACACATTCCACTTGAAGTCT+GGG 0.505693 3_2:+39592203 None:intergenic
CATAAATCTCGGTAATGACC+AGG 0.507288 3_2:+39591041 None:intergenic
AAATGAAAGGAAATAGAGAA+TGG 0.507748 3_2:-39586765 Msa0405200:three_prime_UTR
TAATTCTAGAGAAGAGTTCG+AGG 0.508271 3_2:+39589044 None:intergenic
CTGCGGAGCGTGAAATCGCT+AGG 0.509620 3_2:-39593734 Msa0405200:CDS
AATGTTGCTGTTCAGGTACA+AGG 0.509773 3_2:-39590293 Msa0405200:CDS
ATGGCTCCTTTCTCTACAGT+TGG 0.510714 3_2:-39592154 Msa0405200:CDS
TTCTGGCCACATTCTTTCTG+TGG 0.512555 3_2:-39590657 Msa0405200:CDS
AGGATAATTAAGAATAATCC+TGG 0.512597 3_2:-39593975 Msa0405200:CDS
CTCCTCTCTCTGTTGTGTGA+GGG 0.514516 3_2:+39594335 None:intergenic
TCGAGATGGAAGAATTTGGA+GGG 0.518629 3_2:-39586664 Msa0405200:three_prime_UTR
CAACCAAATTTAAATATACC+GGG 0.518875 3_2:+39590254 None:intergenic
GTAGATTACAGAAACATCAT+TGG 0.519025 3_2:-39588910 Msa0405200:intron
AAGCGACCGTATAGGAATCA+TGG 0.520598 3_2:-39588559 Msa0405200:CDS
ATTGATGGAGATGGAATCAA+TGG 0.521134 3_2:+39594092 None:intergenic
CTCCATGAACTGACCCTGAC+CGG 0.524172 3_2:+39586870 None:intergenic
GAGTGTAACAACTGTTTCCC+AGG 0.524237 3_2:+39591523 None:intergenic
ATAAGAATGAAGTTGATGAT+TGG 0.525841 3_2:-39593914 Msa0405200:CDS
GACATTCTAAGCGACCGTAT+AGG 0.526286 3_2:-39588567 Msa0405200:CDS
GGCATATCTGACATCCAGCT+TGG 0.526758 3_2:-39587688 Msa0405200:CDS
CTATTAGGACCCAATGGAGC+GGG 0.528099 3_2:-39589657 Msa0405200:CDS
GTTTCAACTCCTGAAGATAA+CGG 0.529040 3_2:-39590963 Msa0405200:CDS
CTTCCTATTTGAACTCAACA+TGG 0.529346 3_2:-39591411 Msa0405200:intron
GAAAGAGCTTAAACTTCGCC+AGG 0.529573 3_2:-39592056 Msa0405200:intron
GAATATGAGCTTTCTGGGAG+TGG 0.529777 3_2:+39586933 None:intergenic
ACTCTGCATACTGGTTATCA+TGG 0.530073 3_2:-39591550 Msa0405200:CDS
AAGGAGCCATTCCTGGGTGC+GGG 0.532692 3_2:+39592167 None:intergenic
CGTATAGGAATCATGGCAAA+GGG 0.534824 3_2:-39588552 Msa0405200:CDS
AATGATCACAGTCCTGCAAA+TGG 0.535003 3_2:-39588444 Msa0405200:CDS
GTGGACTAAACTCTTCATGC+CGG 0.539359 3_2:+39590387 None:intergenic
CAAGAGTTGTTAGACCAAGC+TGG 0.541847 3_2:+39587674 None:intergenic
ATGTCAAGGTCAAAGTCACT+AGG 0.542916 3_2:+39587590 None:intergenic
TCTGTTGTGTGAGGGAGAGA+GGG 0.544368 3_2:+39594343 None:intergenic
CGTTGTCTTGCAGTAGCAGA+TGG 0.546260 3_2:+39586893 None:intergenic
CCCACATACATAGCTCCTAC+AGG 0.547082 3_2:+39587049 None:intergenic
AAAGGAGCCATTCCTGGGTG+CGG 0.547300 3_2:+39592166 None:intergenic
CAATAACAAGGAGGCATGTG+TGG 0.547456 3_2:-39588656 Msa0405200:CDS
TCTCCTCTCTCTGTTGTGTG+AGG 0.549878 3_2:+39594334 None:intergenic
GGCAACTGAAAATCAAAAGT+AGG 0.551167 3_2:+39593768 None:intergenic
CCTCGTTATTGGACAGGAGA+CGG 0.551929 3_2:-39590556 Msa0405200:CDS
GCATTTCTTTCATAGAGGGT+GGG 0.552589 3_2:-39590433 Msa0405200:intron
AAGAATCCTATGCAATGTCC+TGG 0.553087 3_2:-39593885 Msa0405200:CDS
CTGCAAGACAACGCCGGTCA+GGG 0.558498 3_2:-39586883 Msa0405200:CDS
GGAATTCCCGCACCCAGGAA+TGG 0.559180 3_2:-39592173 Msa0405200:CDS
GGGAGTGGCCGGCAATACAA+AGG 0.562004 3_2:+39586948 None:intergenic
ATTGATCCAACTGTAGAGAA+AGG 0.562560 3_2:+39592148 None:intergenic
TTTACCTTAACAGCGTGGTA+AGG 0.562656 3_2:+39590206 None:intergenic
GGGATAGGCAATGACCGTGA+TGG 0.562743 3_2:-39591582 Msa0405200:intron
GACATCTGGAGAGTCTGTCC+AGG 0.563696 3_2:-39587572 Msa0405200:intron
GATGCAGCCAAAGTAAGAGC+TGG 0.564253 3_2:-39588870 Msa0405200:CDS
TCCTGTAGGAGCTATGTATG+TGG 0.564459 3_2:-39587050 Msa0405200:CDS
GCCGGCAATACAAAGGGTAC+CGG 0.564920 3_2:+39586955 None:intergenic
TGGACTAAACTCTTCATGCC+GGG 0.567053 3_2:+39590388 None:intergenic
GACAGACTCTCCAGATGTCA+AGG 0.568009 3_2:+39587576 None:intergenic
TTGCAGATGGTGTCAACAGT+AGG 0.570022 3_2:-39591080 Msa0405200:intron
CCTGTAGGAGCTATGTATGT+GGG 0.570418 3_2:-39587049 Msa0405200:CDS
GTCGAGATGGAAGAATTTGG+AGG 0.570535 3_2:-39586665 Msa0405200:three_prime_UTR
TCAACAGGTATTTCTCTACC+AGG 0.570994 3_2:+39593957 None:intergenic
ATGAAGAATTTCTCCTCACA+AGG 0.572331 3_2:+39594065 None:intergenic
GAAACAATAACCATAAATCT+CGG 0.572683 3_2:+39591030 None:intergenic
ACTTCTACCATAAAACCTGT+GGG 0.576329 3_2:+39586998 None:intergenic
AAATGAAGAAGATTGGTGAG+AGG 0.576882 3_2:+39594192 None:intergenic
GATTATTGGAGTGTGTCCCC+AGG 0.579294 3_2:-39589392 Msa0405200:intron
AGAGAGAGAGAAGAGAGGTG+AGG 0.579692 3_2:+39594366 None:intergenic
CTCCCTCACACAACAGAGAG+AGG 0.580469 3_2:-39594337 Msa0405200:five_prime_UTR
TACAGAAACATCATTGGCAG+AGG 0.580624 3_2:-39588904 Msa0405200:CDS
CAGCTATTAGTTGTTTGACA+GGG 0.580828 3_2:-39589626 Msa0405200:CDS
TAGAGAAAGGAGCCATTCCT+GGG 0.582798 3_2:+39592161 None:intergenic
CCGTATAGGAATCATGGCAA+AGG 0.583938 3_2:-39588553 Msa0405200:CDS
AATGAAAGCTGATAACAAGA+AGG 0.585623 3_2:+39591264 None:intergenic
TTCAAGGAATTCCCGCACCC+AGG 0.586408 3_2:-39592178 Msa0405200:CDS
GGAGTGGCCGGCAATACAAA+GGG 0.587849 3_2:+39586949 None:intergenic
CGAGATGGAAGAATTTGGAG+GGG 0.588801 3_2:-39586663 Msa0405200:three_prime_UTR
TACTTCTACCATAAAACCTG+TGG 0.593458 3_2:+39586997 None:intergenic
TCATCTTCGGCAACAACAGT+CGG 0.593670 3_2:-39591235 Msa0405200:CDS
CAGCCTTTGCAAGCACACTC+AGG 0.597155 3_2:+39590985 None:intergenic
CAGATGGTGTCAACAGTAGG+AGG 0.599169 3_2:-39591077 Msa0405200:CDS
GTAAGAGCTGGAAGTTACAG+TGG 0.600311 3_2:-39588858 Msa0405200:CDS
GTTGCCTCTTCAGCTTGCTG+CGG 0.600797 3_2:-39593751 Msa0405200:CDS
AGGCCTGAGTGTGCTTGCAA+AGG 0.601784 3_2:-39590988 Msa0405200:CDS
TAGAAAGTGCTGCAGCTGAA+GGG 0.602703 3_2:-39587615 Msa0405200:CDS
AGGACGTCTTCATCATCTGG+TGG 0.603910 3_2:+39590368 None:intergenic
GATGGAGATGGAATCAATGG+TGG 0.605880 3_2:+39594095 None:intergenic
TCCATCAATCAAACCTTGTG+AGG 0.609109 3_2:-39594078 Msa0405200:CDS
TCTACAGTTTGATATCCTAT+GGG 0.609822 3_2:-39589089 Msa0405200:intron
TGTTATGATTTCATTTGGAG+CGG 0.613234 3_2:-39594032 Msa0405200:CDS
GGGATAACTCCAGTAACTGA+TGG 0.616241 3_2:-39589606 Msa0405200:CDS
TCCCAAATGAAATGGGTGTG+AGG 0.617777 3_2:-39590603 Msa0405200:CDS
TCACTAAAATGAATAGCACC+AGG 0.621112 3_2:+39593867 None:intergenic
ACAGTTTGATATCCTATGGG+AGG 0.622018 3_2:-39589086 Msa0405200:intron
TGTGATTCCTCATGAAAGAG+AGG 0.624747 3_2:-39588244 Msa0405200:CDS
ATGGAGATGGAATCAATGGT+GGG 0.627118 3_2:+39594096 None:intergenic
CTGGTTATCATGGCTAACCT+GGG 0.627124 3_2:-39591540 Msa0405200:CDS
AGTTTCGTACGATTGTTGAG+AGG 0.627828 3_2:-39593995 Msa0405200:CDS
ACTCCAGTAACTGATGGAGA+TGG 0.628421 3_2:-39589600 Msa0405200:intron
CTGGTATGGATCCAATAACA+AGG 0.631438 3_2:-39588668 Msa0405200:CDS
TGTCAAGGTCAAAGTCACTA+GGG 0.633353 3_2:+39587591 None:intergenic
CCGTCTCCTGTCCAATAACG+AGG 0.638033 3_2:+39590556 None:intergenic
GACCAGACAAAGCCTCCCAT+AGG 0.638746 3_2:+39589074 None:intergenic
ATTGGCAGAGGTGAGACTCA+CGG 0.644251 3_2:-39588892 Msa0405200:CDS
TGGAATCGGATATGTCGAGA+TGG 0.644377 3_2:-39586678 Msa0405200:three_prime_UTR
GTGAAGCAGCAACAAACACA+AGG 0.646193 3_2:-39590329 Msa0405200:CDS
CGATGACTGTGTGCTGACAA+TGG 0.647516 3_2:-39590901 Msa0405200:intron
AACGAACCACAGAAAGAATG+TGG 0.650200 3_2:+39590651 None:intergenic
AGAGCTGGAAGTTACAGTGG+AGG 0.650512 3_2:-39588855 Msa0405200:CDS
AATAACAAGGAGGCATGTGT+GGG 0.650686 3_2:-39588655 Msa0405200:CDS
AGCATCAGCAAGACATCGTG+AGG 0.651351 3_2:-39588415 Msa0405200:CDS
GGCATTGTGAAGACTTACCC+CGG 0.651356 3_2:-39590272 Msa0405200:CDS
CATCCAAAATGACTAATTTG+GGG 0.651859 3_2:+39588790 None:intergenic
AGGAGTGCCTCTCTTTCATG+AGG 0.652639 3_2:+39588237 None:intergenic
CCTTGAGCAAAAGGATTAGG+CGG 0.654792 3_2:+39591008 None:intergenic
CTCCAAATGAAATCATAACA+CGG 0.654878 3_2:+39594035 None:intergenic
ATAGCACCAGGACATTGCAT+AGG 0.656866 3_2:+39593879 None:intergenic
GAGTCTACTGAATACCCCAC+AGG 0.659329 3_2:-39587013 Msa0405200:CDS
GTAGTTGCATATCTTCAACC+CGG 0.661373 3_2:-39590406 Msa0405200:CDS
ATAAATCTCGGTAATGACCA+GGG 0.666011 3_2:+39591042 None:intergenic
TCTACTAGTGTTCAGAAACG+TGG 0.672332 3_2:-39593804 Msa0405200:CDS
TCTATTAGGACCCAATGGAG+CGG 0.674018 3_2:-39589658 Msa0405200:CDS
CTGCTACTGCAAGACAACGC+CGG 0.674437 3_2:-39586889 Msa0405200:CDS
AACCAAATTTAAATATACCG+GGG 0.682377 3_2:+39590255 None:intergenic
TTCAACTCCTGAAGATAACG+GGG 0.682515 3_2:-39590961 Msa0405200:CDS
GATAGGCAATGACCGTGATG+GGG 0.683113 3_2:-39591580 Msa0405200:intron
AGAGTCGTAAAGCCCCATCA+CGG 0.695740 3_2:+39591568 None:intergenic
ACGTGACTTCAATCTGATCG+AGG 0.695850 3_2:+39588509 None:intergenic
CGTTATTGGACAGGAGACGG+AGG 0.708980 3_2:-39590553 Msa0405200:CDS
TACTGGGAACAAGATGACAC+CGG 0.712706 3_2:-39586974 Msa0405200:CDS
CTTCTACCATAAAACCTGTG+GGG 0.715948 3_2:+39586999 None:intergenic
GATGATTTACCTTAACAGCG+TGG 0.717695 3_2:+39590201 None:intergenic
GGGGTTAGCTGGAATACACG+AGG 0.756377 3_2:-39590942 Msa0405200:CDS
GTATGGATCCAATAACAAGG+AGG 0.783240 3_2:-39588665 Msa0405200:CDS
AGAATGTGTTGTGAGAACAA+TGG 0.804411 3_2:+39588602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTAATTTTTAAT+TGG - chr3_2:39588494-39588513 Msa0405200:CDS 0.0%
!!! CTTTATTTAAAATCAAAATA+TGG - chr3_2:39587903-39587922 Msa0405200:intron 10.0%
!!! AATAATAAAAGTTACAATTT+TGG - chr3_2:39588439-39588458 Msa0405200:CDS 10.0%
!!! ATTATTTAATTTTTAATTGG+AGG - chr3_2:39588497-39588516 Msa0405200:CDS 10.0%
!!! TAATTTTAATATTAGAAGTT+AGG - chr3_2:39590752-39590771 Msa0405200:intron 10.0%
!!! AATTTTAATATTAGAAGTTA+GGG - chr3_2:39590753-39590772 Msa0405200:intron 10.0%
!!! AGAATTGTTTTTTAAATAGA+CGG - chr3_2:39587833-39587852 Msa0405200:intron 15.0%
!! ATATTCTAAATTCTAATTGA+TGG - chr3_2:39588678-39588697 Msa0405200:intron 15.0%
!! TATATATCAACAATATCTAT+TGG + chr3_2:39589050-39589069 None:intergenic 15.0%
!! ATGTAAAATAATTTAACAGA+TGG + chr3_2:39591087-39591106 None:intergenic 15.0%
!! TATATATATATTCCAAATGT+TGG - chr3_2:39591412-39591431 Msa0405200:CDS 15.0%
!! AGATTATAAAATTTGGTAAA+TGG + chr3_2:39591816-39591835 None:intergenic 15.0%
!! AAACTGTAGATTATAAAATT+TGG + chr3_2:39591823-39591842 None:intergenic 15.0%
!! TGAAATTATTAATAACCATT+AGG - chr3_2:39591974-39591993 Msa0405200:intron 15.0%
!! ATAATTGAAAATGCAAAAAA+AGG - chr3_2:39592292-39592311 Msa0405200:intron 15.0%
!! TAATTGAAAATGCAAAAAAA+GGG - chr3_2:39592293-39592312 Msa0405200:intron 15.0%
!!! AAAAAATACAAAACCATTTT+AGG - chr3_2:39593747-39593766 Msa0405200:CDS 15.0%
!!! AAAAATACAAAACCATTTTA+GGG - chr3_2:39593748-39593767 Msa0405200:CDS 15.0%
!!! CGCATTAATATTTTTTTTTT+TGG - chr3_2:39594190-39594209 Msa0405200:CDS 15.0%
!!! TATTTTTTTTTTTGGTTACA+AGG - chr3_2:39594198-39594217 Msa0405200:CDS 15.0%
!! AAAAAAACATATTACTCTCA+TGG - chr3_2:39586678-39586697 Msa0405200:three_prime_UTR 20.0%
!!! ATTCATTTTAGTGAAAAGAA+TGG - chr3_2:39587064-39587083 Msa0405200:intron 20.0%
!!! AATGGAAGTATTATTAGTTA+TGG - chr3_2:39587082-39587101 Msa0405200:intron 20.0%
!!! ATGGAAGTATTATTAGTTAT+GGG - chr3_2:39587083-39587102 Msa0405200:intron 20.0%
!!! AAATCAAAATATGGGTTTTA+TGG - chr3_2:39587912-39587931 Msa0405200:intron 20.0%
!! AGAATTATGATCAAAATCAA+TGG - chr3_2:39587979-39587998 Msa0405200:intron 20.0%
!!! AAAATCTGGGTTTAAAATTT+TGG - chr3_2:39588225-39588244 Msa0405200:intron 20.0%
!!! TGGAACTACAATTTTAAAAT+TGG - chr3_2:39588384-39588403 Msa0405200:intron 20.0%
!! TTGTTGATATATAGAAAACA+AGG - chr3_2:39589057-39589076 Msa0405200:CDS 20.0%
!!! CATATCAAGGTTTTAAATAA+AGG + chr3_2:39589199-39589218 None:intergenic 20.0%
!!! TTATTTTATCTATTTGCAGA+TGG - chr3_2:39589829-39589848 Msa0405200:intron 20.0%
!! TATGGTTCAAATAATTTACT+CGG - chr3_2:39590202-39590221 Msa0405200:intron 20.0%
!! GACAGAATGATATTTATATA+CGG - chr3_2:39590241-39590260 Msa0405200:CDS 20.0%
!! AATATAATCCCAAATGAAAT+GGG - chr3_2:39590312-39590331 Msa0405200:CDS 20.0%
!! AAAATTAAATCCATGTTGTA+TGG + chr3_2:39591021-39591040 None:intergenic 20.0%
!! TTATTCTCAAATTACTTTCA+GGG - chr3_2:39591205-39591224 Msa0405200:intron 20.0%
!!! AATCAGTTATTTTGTCTATT+AGG - chr3_2:39591250-39591269 Msa0405200:CDS 20.0%
!! TATATACGCAATCTTAATAT+AGG + chr3_2:39591781-39591800 None:intergenic 20.0%
!!! ATACTGATTTTATAGAATCT+GGG + chr3_2:39591914-39591933 None:intergenic 20.0%
!! TTTCAAATAATACAAACTAG+CGG + chr3_2:39591959-39591978 None:intergenic 20.0%
!!! AAAGCATATATTTTCTCAAA+AGG - chr3_2:39592192-39592211 Msa0405200:CDS 20.0%
!!! AATTTGAGTTATTTACCTAT+AGG + chr3_2:39592878-39592897 None:intergenic 20.0%
!! AAATGCAGTTAAAAAATCTA+CGG + chr3_2:39593030-39593049 None:intergenic 20.0%
! ATTAGGAAAATGAAGAAGAT+TGG + chr3_2:39586740-39586759 None:intergenic 25.0%
! AGGATAATTAAGAATAATCC+TGG - chr3_2:39586947-39586966 Msa0405200:CDS 25.0%
!!! ATAAGAATGAAGTTGATGAT+TGG - chr3_2:39587008-39587027 Msa0405200:CDS 25.0%
!!! ATCGTTGTTTTTTAAATAGC+TGG - chr3_2:39587253-39587272 Msa0405200:intron 25.0%
!! TTTTAAATAGCTGATGTGTT+TGG - chr3_2:39587658-39587677 Msa0405200:CDS 25.0%
!! GATCAAGGTTTAAAACAAAA+GGG + chr3_2:39587870-39587889 None:intergenic 25.0%
!! TGATCAAGGTTTAAAACAAA+AGG + chr3_2:39587871-39587890 None:intergenic 25.0%
!!! AGAGTAAACAATTTTGATCA+AGG + chr3_2:39587885-39587904 None:intergenic 25.0%
! ATACCATAACCATTACTAAT+TGG + chr3_2:39588088-39588107 None:intergenic 25.0%
! TCGTTTGTATAATCAAAATC+TGG - chr3_2:39588211-39588230 Msa0405200:intron 25.0%
! CGTTTGTATAATCAAAATCT+GGG - chr3_2:39588212-39588231 Msa0405200:intron 25.0%
! AATGATATTGCATAGAATTG+TGG - chr3_2:39588279-39588298 Msa0405200:CDS 25.0%
!!! TCAAAGTCAGGTTTTAAAAT+TGG - chr3_2:39588343-39588362 Msa0405200:intron 25.0%
!! AATTGGAACTACAATTTTTG+TGG - chr3_2:39588360-39588379 Msa0405200:intron 25.0%
!! TTGGAACTACAATTTTTGTA+TGG - chr3_2:39588403-39588422 Msa0405200:CDS 25.0%
!!! AAAGTCAAGGTTTTAAATAG+CGG - chr3_2:39588527-39588546 Msa0405200:CDS 25.0%
! TATTGATCTTAGTATTCACA+TGG + chr3_2:39589024-39589043 None:intergenic 25.0%
! TGTGAATACTAAGATCAATA+TGG - chr3_2:39589024-39589043 Msa0405200:CDS 25.0%
!! AAACACTTTAGTTCATATCA+AGG + chr3_2:39589212-39589231 None:intergenic 25.0%
!! ACAGAAAGTATAAATGGTAA+AGG + chr3_2:39589550-39589569 None:intergenic 25.0%
!! GAAAAGACAGAAAGTATAAA+TGG + chr3_2:39589556-39589575 None:intergenic 25.0%
!! ATACTTTCTGTCTTTTCATT+TGG - chr3_2:39589559-39589578 Msa0405200:intron 25.0%
!! TACTTTCTGTCTTTTCATTT+GGG - chr3_2:39589560-39589579 Msa0405200:intron 25.0%
! TCTGTATTATGTGAATTTGA+TGG - chr3_2:39589588-39589607 Msa0405200:intron 25.0%
! AAACAAAAGGAGAAAATACT+AGG + chr3_2:39589625-39589644 None:intergenic 25.0%
! TTTCATTCGTAAATCATCTT+CGG - chr3_2:39589674-39589693 Msa0405200:CDS 25.0%
! GAAACAATAACCATAAATCT+CGG + chr3_2:39589895-39589914 None:intergenic 25.0%
!! TCTTAAATGGAAACAAGTTT+TGG + chr3_2:39590087-39590106 None:intergenic 25.0%
! AAAGTCAAAGTCTTCTTAAA+TGG + chr3_2:39590100-39590119 None:intergenic 25.0%
! TGGAACATATTCATCTAAAA+GGG + chr3_2:39590128-39590147 None:intergenic 25.0%
! ATGGAACATATTCATCTAAA+AGG + chr3_2:39590129-39590148 None:intergenic 25.0%
!! TTTTAGATGAATATGTTCCA+TGG - chr3_2:39590128-39590147 Msa0405200:intron 25.0%
! TAAAAGGAAATATAGAACCA+TGG + chr3_2:39590148-39590167 None:intergenic 25.0%
! GATTATATTGTCAAAGTAGA+TGG + chr3_2:39590301-39590320 None:intergenic 25.0%
! CAATATAATCCCAAATGAAA+TGG - chr3_2:39590311-39590330 Msa0405200:CDS 25.0%
! ATGAAAGAAATGCGAAAAAA+CGG + chr3_2:39590482-39590501 None:intergenic 25.0%
! AACCAAATTTAAATATACCG+GGG + chr3_2:39590670-39590689 None:intergenic 25.0%
! CAACCAAATTTAAATATACC+GGG + chr3_2:39590671-39590690 None:intergenic 25.0%
! GCAACCAAATTTAAATATAC+CGG + chr3_2:39590672-39590691 None:intergenic 25.0%
!! TTTTGCATGAAAAAAGACAA+AGG + chr3_2:39590799-39590818 None:intergenic 25.0%
!! CTGAAATATTTTCCATTAGT+TGG - chr3_2:39590956-39590975 Msa0405200:CDS 25.0%
! TTGTATGATTGTTTAAGAGA+TGG + chr3_2:39591044-39591063 None:intergenic 25.0%
! TATTGAAACACGAAATATGT+GGG + chr3_2:39591116-39591135 None:intergenic 25.0%
! ATATTGAAACACGAAATATG+TGG + chr3_2:39591117-39591136 None:intergenic 25.0%
! CGTGTTTCAATATGAAAATT+TGG - chr3_2:39591124-39591143 Msa0405200:intron 25.0%
!! GATTGTAATTTTCTCCTAAT+AGG - chr3_2:39591151-39591170 Msa0405200:intron 25.0%
! GTTATTCTCAAATTACTTTC+AGG - chr3_2:39591204-39591223 Msa0405200:intron 25.0%
! TCTTTCTTTAAACCAACATT+TGG + chr3_2:39591427-39591446 None:intergenic 25.0%
! TCAAACATTCGAAAGATTAT+TGG - chr3_2:39591516-39591535 Msa0405200:CDS 25.0%
! TACAAGAAAATAATGAGAGA+TGG + chr3_2:39591563-39591582 None:intergenic 25.0%
! GCTCTAATATCATATTGAAT+TGG - chr3_2:39591684-39591703 Msa0405200:intron 25.0%
!! AATTTTCTGATTGTCTAACT+CGG - chr3_2:39591707-39591726 Msa0405200:intron 25.0%
!!! AACTCTTCTCTAGAATTAAA+GGG - chr3_2:39591883-39591902 Msa0405200:intron 25.0%
!!! TACTGATTTTATAGAATCTG+GGG + chr3_2:39591913-39591932 None:intergenic 25.0%
!!! CATACTGATTTTATAGAATC+TGG + chr3_2:39591915-39591934 None:intergenic 25.0%
! ATAAAATCAGTATGTTATCC+AGG - chr3_2:39591921-39591940 Msa0405200:intron 25.0%
! TCATCCAAAATGACTAATTT+GGG + chr3_2:39592136-39592155 None:intergenic 25.0%
! TTCATCCAAAATGACTAATT+TGG + chr3_2:39592137-39592156 None:intergenic 25.0%
!!! ATATATCCTTTTTTGCATAC+CGG + chr3_2:39592160-39592179 None:intergenic 25.0%
!! ATTCTTATTTCTTAGACTAC+TGG - chr3_2:39592235-39592254 Msa0405200:intron 25.0%
!! AATATTTTCGCGACAAAAAT+TGG - chr3_2:39592580-39592599 Msa0405200:intron 25.0%
! AGAAAAGAAAACTTACTGTA+AGG + chr3_2:39592708-39592727 None:intergenic 25.0%
!! TACAGTAAGTTTTCTTTTCT+TGG - chr3_2:39592708-39592727 Msa0405200:intron 25.0%
! ACACAAAATGAATCATAACA+TGG - chr3_2:39593112-39593131 Msa0405200:intron 25.0%
!! CAAATTCTTCTTTTCTATCT+TGG + chr3_2:39593215-39593234 None:intergenic 25.0%
! CAAGATAGAAAAGAAGAATT+TGG - chr3_2:39593213-39593232 Msa0405200:intron 25.0%
! CTCAATAAATCAATTCAAAC+AGG + chr3_2:39593495-39593514 None:intergenic 25.0%
!!! CTATTTCCATAAGTTGTTTT+CGG - chr3_2:39593558-39593577 Msa0405200:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr3_2:39593704-39593723 Msa0405200:intron 25.0%
!!! TTTTTACCAGTACTAGTTTA+TGG + chr3_2:39593731-39593750 None:intergenic 25.0%
!!! TTTTATGGTAGAAGTATACT+GGG - chr3_2:39593932-39593951 Msa0405200:CDS 25.0%
! AAATGAAAGGAAATAGAGAA+TGG - chr3_2:39594157-39594176 Msa0405200:CDS 25.0%
!!! TGTTTTTTTTAAGCAACGCT+TGG + chr3_2:39586667-39586686 None:intergenic 30.0%
! TGCTTTTATTGCTTTGTCTA+TGG + chr3_2:39586768-39586787 None:intergenic 30.0%
CTCCAAATGAAATCATAACA+CGG + chr3_2:39586890-39586909 None:intergenic 30.0%
TGTTATGATTTCATTTGGAG+CGG - chr3_2:39586890-39586909 Msa0405200:CDS 30.0%
TAGAGAAATACCTGTTGAAA+AGG - chr3_2:39586970-39586989 Msa0405200:CDS 30.0%
GATGCTATTAGTACTAGTTA+CGG - chr3_2:39587314-39587333 Msa0405200:intron 30.0%
! TTTTAAATAGCTGACATGTC+TGG - chr3_2:39587377-39587396 Msa0405200:intron 30.0%
ACTAGTACTAATTGTGTGTT+CGG + chr3_2:39587446-39587465 None:intergenic 30.0%
AACTGACATGTTTGATATCA+AGG - chr3_2:39587508-39587527 Msa0405200:intron 30.0%
! TATGGTCTTAGTTATAGTCA+TGG - chr3_2:39587930-39587949 Msa0405200:intron 30.0%
TGCATTCATCCAATTAGTAA+TGG - chr3_2:39588076-39588095 Msa0405200:intron 30.0%
CATCCAATTAGTAATGGTTA+TGG - chr3_2:39588082-39588101 Msa0405200:intron 30.0%
!! TTTGGTCTTAGTTATAGTCA+TGG - chr3_2:39588243-39588262 Msa0405200:CDS 30.0%
ACTTTGATTATTCCTCCAAT+TGG + chr3_2:39588330-39588349 None:intergenic 30.0%
GTACTAAAAAATGTCGATCA+AGG + chr3_2:39588471-39588490 None:intergenic 30.0%
! ACCAAATGAAGTGTCAATTA+TGG - chr3_2:39588602-39588621 Msa0405200:CDS 30.0%
ACCATAATTGACACTTCATT+TGG + chr3_2:39588606-39588625 None:intergenic 30.0%
! AATTTTTGCATTCTCAACAC+AGG + chr3_2:39588932-39588951 None:intergenic 30.0%
ATTTGAAGAATATAGGCACT+AGG + chr3_2:39588959-39588978 None:intergenic 30.0%
TGCCTATATTCTTCAAATAC+TGG - chr3_2:39588961-39588980 Msa0405200:intron 30.0%
GACCAGTATTTGAAGAATAT+AGG + chr3_2:39588966-39588985 None:intergenic 30.0%
ACTAAGGTGTACTAATTCTA+AGG + chr3_2:39589001-39589020 None:intergenic 30.0%
!! AATCATGTTTGTTGTTGTCA+TGG - chr3_2:39589306-39589325 Msa0405200:intron 30.0%
!!! TTTCTCCTTTTGTTTTAGAC+TGG - chr3_2:39589630-39589649 Msa0405200:CDS 30.0%
!!! TTCTCCTTTTGTTTTAGACT+GGG - chr3_2:39589631-39589650 Msa0405200:CDS 30.0%
AATGAAAGCTGATAACAAGA+AGG + chr3_2:39589661-39589680 None:intergenic 30.0%
TACTGAGTACTTCAAATCAA+TGG - chr3_2:39589783-39589802 Msa0405200:intron 30.0%
AATCTTACTGAAATGCTGAA+TGG + chr3_2:39590181-39590200 None:intergenic 30.0%
AGCATTTCAGTAAGATTCTA+TGG - chr3_2:39590184-39590203 Msa0405200:intron 30.0%
TGATATTTATATACGGCTTC+TGG - chr3_2:39590248-39590267 Msa0405200:CDS 30.0%
ACTTTCTAAATCCTCGTTAT+TGG - chr3_2:39590355-39590374 Msa0405200:CDS 30.0%
! TTTTCGCATTTCTTTCATAG+AGG - chr3_2:39590484-39590503 Msa0405200:intron 30.0%
TTTCGCATTTCTTTCATAGA+GGG - chr3_2:39590485-39590504 Msa0405200:intron 30.0%
! TCACAACATTTTCTTCTTCA+AGG + chr3_2:39590577-39590596 None:intergenic 30.0%
TACCCCGGTATATTTAAATT+TGG - chr3_2:39590665-39590684 Msa0405200:CDS 30.0%
TTTCAGATATAAGAGCCTTT+GGG + chr3_2:39590942-39590961 None:intergenic 30.0%
ATTTCAGATATAAGAGCCTT+TGG + chr3_2:39590943-39590962 None:intergenic 30.0%
ATCATACAAACTGAATATGC+AGG - chr3_2:39591055-39591074 Msa0405200:CDS 30.0%
!! TCCTTTACAGCATTGATTTA+TGG - chr3_2:39591465-39591484 Msa0405200:CDS 30.0%
!! CCTTTACAGCATTGATTTAT+GGG - chr3_2:39591466-39591485 Msa0405200:CDS 30.0%
!! AGCATTGATTTATGGGAATT+CGG - chr3_2:39591473-39591492 Msa0405200:CDS 30.0%
ATCTACAGTTTGATATCCTA+TGG - chr3_2:39591832-39591851 Msa0405200:intron 30.0%
TCTACAGTTTGATATCCTAT+GGG - chr3_2:39591833-39591852 Msa0405200:intron 30.0%
!! GAACTCTTCTCTAGAATTAA+AGG - chr3_2:39591882-39591901 Msa0405200:intron 30.0%
! ATTTTCAGCAGATTTCCTAA+TGG + chr3_2:39591992-39592011 None:intergenic 30.0%
GTAGATTACAGAAACATCAT+TGG - chr3_2:39592012-39592031 Msa0405200:intron 30.0%
CATCCAAAATGACTAATTTG+GGG + chr3_2:39592135-39592154 None:intergenic 30.0%
!! ATTAGTCATTTTGGATGAAC+CGG - chr3_2:39592138-39592157 Msa0405200:CDS 30.0%
TATTTCTTAGACTACTGGTA+TGG - chr3_2:39592240-39592259 Msa0405200:intron 30.0%
TGCTGCAAAAAACAATTCAT+GGG + chr3_2:39592613-39592632 None:intergenic 30.0%
ATGCTGCAAAAAACAATTCA+TGG + chr3_2:39592614-39592633 None:intergenic 30.0%
TTTAGATGTAGTACCAAAAG+AGG - chr3_2:39592633-39592652 Msa0405200:intron 30.0%
! AAGTTATTGTTCTCCTCTTT+TGG + chr3_2:39592649-39592668 None:intergenic 30.0%
! ATTTACCTATAGGTGTTATG+AGG + chr3_2:39592868-39592887 None:intergenic 30.0%
! GAATAGGTTTTCATGCATAA+AGG + chr3_2:39592939-39592958 None:intergenic 30.0%
AATCATAACATGGAAGATTG+TGG - chr3_2:39593122-39593141 Msa0405200:intron 30.0%
TTTCTTGAATATTGCAAAGC+AGG - chr3_2:39593278-39593297 Msa0405200:intron 30.0%
! TCAAGAAATTGAGTTCTAGT+TGG - chr3_2:39593415-39593434 Msa0405200:intron 30.0%
CGAAAACAACTTATGGAAAT+AGG + chr3_2:39593560-39593579 None:intergenic 30.0%
AATAAGCCGAAAACAACTTA+TGG + chr3_2:39593567-39593586 None:intergenic 30.0%
CTTATTTCGATAAGTTCTTG+AGG - chr3_2:39593581-39593600 Msa0405200:intron 30.0%
! AAAAAGAGTAATCTCTAGAG+AGG + chr3_2:39593778-39593797 None:intergenic 30.0%
CAAAAAATTGCTAGTTGTCA+TGG + chr3_2:39593826-39593845 None:intergenic 30.0%
! ATAATTTTGCAGATTCCTGT+AGG - chr3_2:39593858-39593877 Msa0405200:CDS 30.0%
!! GTTTTATGGTAGAAGTATAC+TGG - chr3_2:39593931-39593950 Msa0405200:CDS 30.0%
! AAGTTAGTTCAGACAGTTTT+CGG - chr3_2:39594093-39594112 Msa0405200:CDS 30.0%
ACTCAGGATAGAAAAATGAA+AGG - chr3_2:39594144-39594163 Msa0405200:CDS 30.0%
TATATGTTGTCAGTTGGAAT+CGG - chr3_2:39594230-39594249 Msa0405200:CDS 30.0%
AAATGAAGAAGATTGGTGAG+AGG + chr3_2:39586733-39586752 None:intergenic 35.0%
ATTGATGGAGATGGAATCAA+TGG + chr3_2:39586833-39586852 None:intergenic 35.0%
ATGAAGAATTTCTCCTCACA+AGG + chr3_2:39586860-39586879 None:intergenic 35.0%
TGCCGTGTTATGATTTCATT+TGG - chr3_2:39586885-39586904 Msa0405200:CDS 35.0%
TCAACAATCGTACGAAACTT+TGG + chr3_2:39586926-39586945 None:intergenic 35.0%
! AAACTCTTCACCTTTTCAAC+AGG + chr3_2:39586983-39587002 None:intergenic 35.0%
TCACTAAAATGAATAGCACC+AGG + chr3_2:39587058-39587077 None:intergenic 35.0%
GGCAACTGAAAATCAAAAGT+AGG + chr3_2:39587157-39587176 None:intergenic 35.0%
GAAATCGCTAGGTTTCTTAT+TGG - chr3_2:39587199-39587218 Msa0405200:intron 35.0%
GAGTACATCAGAATCATGAT+GGG - chr3_2:39587409-39587428 Msa0405200:intron 35.0%
AGGTAAGTTTGTCAGAATCA+CGG - chr3_2:39587528-39587547 Msa0405200:intron 35.0%
ACTGGTACTACTTGTATGTT+CGG + chr3_2:39587593-39587612 None:intergenic 35.0%
CATACAAGTAGTACCAGTTA+TGG - chr3_2:39587595-39587614 Msa0405200:CDS 35.0%
!! AGCTGACATGTTTGTTATCT+CGG - chr3_2:39587800-39587819 Msa0405200:intron 35.0%
TAATTGGATGAATGCACGTT+TGG + chr3_2:39588072-39588091 None:intergenic 35.0%
ACGGATAAATTTGACAGATG+TGG - chr3_2:39588121-39588140 Msa0405200:intron 35.0%
CTGATGTATGTAGTTCCAAT+TGG - chr3_2:39588312-39588331 Msa0405200:intron 35.0%
ATGTATGTAGTTCCAATTGG+AGG - chr3_2:39588315-39588334 Msa0405200:intron 35.0%
TTGGAGGAATAATCAAAGTC+AGG - chr3_2:39588331-39588350 Msa0405200:intron 35.0%
! GGAACTACAATTTTTGTGGT+TGG - chr3_2:39588364-39588383 Msa0405200:intron 35.0%
TGGAGGAATAATCAAAGTCA+AGG - chr3_2:39588332-39588351 Msa0405200:intron 35.0%
ATTGACACTTCATTTGGTTG+TGG + chr3_2:39588600-39588619 None:intergenic 35.0%
! TGAAGTGTCAATTATGGTCA+CGG - chr3_2:39588608-39588627 Msa0405200:CDS 35.0%
! CAAGTGGAATGTGTTTTTCA+AGG - chr3_2:39588728-39588747 Msa0405200:intron 35.0%
ATTGATCCAACTGTAGAGAA+AGG + chr3_2:39588777-39588796 None:intergenic 35.0%
TTTCTCTACAGTTGGATCAA+TGG - chr3_2:39588776-39588795 Msa0405200:intron 35.0%
TTCTCTACAGTTGGATCAAT+GGG - chr3_2:39588777-39588796 Msa0405200:intron 35.0%
GCAGTTGCAAGAAAAAATGT+TGG + chr3_2:39588804-39588823 None:intergenic 35.0%
CGTTCTTCAGATAAGTTCAT+TGG - chr3_2:39588836-39588855 Msa0405200:CDS 35.0%
! CTTAGTATTCACATGGACTA+AGG + chr3_2:39589017-39589036 None:intergenic 35.0%
GTGGTTAAATGTAGCTGATA+TGG - chr3_2:39589120-39589139 Msa0405200:intron 35.0%
TCTTAATCGTGGTTGTGTTA+CGG - chr3_2:39589143-39589162 Msa0405200:intron 35.0%
!! TTGTCATGGCGTTTTTGTTT+GGG - chr3_2:39589320-39589339 Msa0405200:intron 35.0%
CTTCCTATTTGAACTCAACA+TGG - chr3_2:39589511-39589530 Msa0405200:intron 35.0%
TCACCATGTTGAGTTCAAAT+AGG + chr3_2:39589517-39589536 None:intergenic 35.0%
! CAAACCCAGTCTAAAACAAA+AGG + chr3_2:39589638-39589657 None:intergenic 35.0%
CATGAAGCCGACAATAAATA+CGG + chr3_2:39589718-39589737 None:intergenic 35.0%
CTTCTCATTCTTTCATGACA+AGG - chr3_2:39589758-39589777 Msa0405200:intron 35.0%
ATAAATCTCGGTAATGACCA+GGG + chr3_2:39589883-39589902 None:intergenic 35.0%
GTTTCAACTCCTGAAGATAA+CGG - chr3_2:39589959-39589978 Msa0405200:intron 35.0%
TTTCAACTCCTGAAGATAAC+GGG - chr3_2:39589960-39589979 Msa0405200:intron 35.0%
!! ATGGAAACAAGTTTTGGTGT+TGG + chr3_2:39590081-39590100 None:intergenic 35.0%
TACTGAAATGCTGAATGGAA+GGG + chr3_2:39590176-39590195 None:intergenic 35.0%
TTACTGAAATGCTGAATGGA+AGG + chr3_2:39590177-39590196 None:intergenic 35.0%
ATGCAAAACAACTGCTCATA+GGG - chr3_2:39590811-39590830 Msa0405200:intron 35.0%
TTCAGATATAAGAGCCTTTG+GGG + chr3_2:39590941-39590960 None:intergenic 35.0%
TGCAATTCTACCATACAACA+TGG - chr3_2:39591008-39591027 Msa0405200:CDS 35.0%
AAATTACTTTCAGGGCTTGT+GGG - chr3_2:39591213-39591232 Msa0405200:intron 35.0%
! TTTTGTCTATTAGGACCCAA+TGG - chr3_2:39591259-39591278 Msa0405200:CDS 35.0%
ACAGCTATTAGTTGTTTGAC+AGG - chr3_2:39591295-39591314 Msa0405200:intron 35.0%
CAGCTATTAGTTGTTTGACA+GGG - chr3_2:39591296-39591315 Msa0405200:intron 35.0%
CCCATAAATCAATGCTGTAA+AGG + chr3_2:39591469-39591488 None:intergenic 35.0%
GGCAAACTTAATTCTAACAG+TGG + chr3_2:39591600-39591619 None:intergenic 35.0%
AGACGTTGCTATATCTATCA+GGG - chr3_2:39591624-39591643 Msa0405200:intron 35.0%
CGCACAACTTGTATTTATAG+AGG - chr3_2:39591732-39591751 Msa0405200:intron 35.0%
! TAATTCTAGAGAAGAGTTCG+AGG + chr3_2:39591881-39591900 None:intergenic 35.0%
AGTGTTGCAATTGCACTTAT+CGG - chr3_2:39592106-39592125 Msa0405200:CDS 35.0%
! TGACCCCAAATTAGTCATTT+TGG - chr3_2:39592129-39592148 Msa0405200:CDS 35.0%
AGAATGTGTTGTGAGAACAA+TGG + chr3_2:39592323-39592342 None:intergenic 35.0%
TGTTCTCACAACACATTCTA+TGG - chr3_2:39592324-39592343 Msa0405200:intron 35.0%
! ATCAGATTGAAGTCACGTTT+TGG - chr3_2:39592418-39592437 Msa0405200:intron 35.0%
CATGAGGAATCACATAAGTT+AGG + chr3_2:39592672-39592691 None:intergenic 35.0%
TAATCAGCATAACTGTAGCA+TGG + chr3_2:39592768-39592787 None:intergenic 35.0%
TATAGCCTCATAACACCTAT+AGG - chr3_2:39592860-39592879 Msa0405200:intron 35.0%
TTTCATGCATAAAGGAGACA+CGG + chr3_2:39592931-39592950 None:intergenic 35.0%
CAGACAGGATTCATTTGAAT+AGG + chr3_2:39592955-39592974 None:intergenic 35.0%
TGTAACATTAAGCAACAGAC+AGG + chr3_2:39592970-39592989 None:intergenic 35.0%
CTACGGACAAATGCAAATTT+AGG + chr3_2:39593013-39593032 None:intergenic 35.0%
AAGATTGTGGTTACTTCGAT+TGG - chr3_2:39593135-39593154 Msa0405200:intron 35.0%
! CGTATAACCGCATTTTCTTT+CGG - chr3_2:39593375-39593394 Msa0405200:intron 35.0%
GCATATACCGAAAGAAAATG+CGG + chr3_2:39593385-39593404 None:intergenic 35.0%
! TACTAGTTTATGGTCCTGTT+TGG + chr3_2:39593721-39593740 None:intergenic 35.0%
ACTTCTACCATAAAACCTGT+GGG + chr3_2:39593927-39593946 None:intergenic 35.0%
TACTTCTACCATAAAACCTG+TGG + chr3_2:39593928-39593947 None:intergenic 35.0%
TTGAGGAATATGAGCTTTCT+GGG + chr3_2:39593997-39594016 None:intergenic 35.0%
TTTGAGGAATATGAGCTTTC+TGG + chr3_2:39593998-39594017 None:intergenic 35.0%
! GATGGTAGTTGGATATTTTG+AGG + chr3_2:39594014-39594033 None:intergenic 35.0%
CTGTCTGAACTAACTTGATT+TGG + chr3_2:39594089-39594108 None:intergenic 35.0%
! TGATTCATGCTCAGTGATTT+TGG - chr3_2:39594116-39594135 Msa0405200:CDS 35.0%
! GATTCATGCTCAGTGATTTT+GGG - chr3_2:39594117-39594136 Msa0405200:CDS 35.0%
CACTTGTATATGTTGTCAGT+TGG - chr3_2:39594224-39594243 Msa0405200:CDS 35.0%
TATGTCGAGATGGAAGAATT+TGG - chr3_2:39594254-39594273 Msa0405200:CDS 35.0%
! CATGACAAACGCTTTTACGT+TGG - chr3_2:39586628-39586647 Msa0405200:three_prime_UTR 40.0%
CTTTGTCTATGGCGAAGATT+AGG + chr3_2:39586757-39586776 None:intergenic 40.0%
ATGGAGATGGAATCAATGGT+GGG + chr3_2:39586829-39586848 None:intergenic 40.0%
CAAGGTTTGATTGATGGAGA+TGG + chr3_2:39586842-39586861 None:intergenic 40.0%
TCCATCAATCAAACCTTGTG+AGG - chr3_2:39586844-39586863 Msa0405200:CDS 40.0%
TCCTCACAAGGTTTGATTGA+TGG + chr3_2:39586848-39586867 None:intergenic 40.0%
AGTTTCGTACGATTGTTGAG+AGG - chr3_2:39586927-39586946 Msa0405200:CDS 40.0%
TCAACAGGTATTTCTCTACC+AGG + chr3_2:39586968-39586987 None:intergenic 40.0%
AAGAATCCTATGCAATGTCC+TGG - chr3_2:39587037-39587056 Msa0405200:CDS 40.0%
TCTACTAGTGTTCAGAAACG+TGG - chr3_2:39587118-39587137 Msa0405200:intron 40.0%
ATCGCTAGGTTTCTTATTGG+AGG - chr3_2:39587202-39587221 Msa0405200:intron 40.0%
! AGCTGGCATGTTTTGTATCA+CGG - chr3_2:39587270-39587289 Msa0405200:intron 40.0%
CGAGTACATCAGAATCATGA+TGG - chr3_2:39587408-39587427 Msa0405200:intron 40.0%
ATCACTACCAATTGCGTGTT+CGG + chr3_2:39587569-39587588 None:intergenic 40.0%
TCTCAGCAGTATACCATAAC+TGG + chr3_2:39587611-39587630 None:intergenic 40.0%
AGCTGATGTGTTTGGTATCA+TGG - chr3_2:39587666-39587685 Msa0405200:CDS 40.0%
TGGTGAGTTTGTCAGAATCA+CGG - chr3_2:39587686-39587705 Msa0405200:CDS 40.0%
ACAGTGAGTTTGTCAGAATC+AGG - chr3_2:39588030-39588049 Msa0405200:intron 40.0%
CAGTGAGTTTGTCAGAATCA+GGG - chr3_2:39588031-39588050 Msa0405200:intron 40.0%
TGGTATACTGCTGAGAATCA+CGG - chr3_2:39588102-39588121 Msa0405200:intron 40.0%
! GACAGATGTGGTGTGAATTT+TGG - chr3_2:39588133-39588152 Msa0405200:intron 40.0%
!! CAAAATCTTTGATGACGCTG+CGG - chr3_2:39588169-39588188 Msa0405200:intron 40.0%
!!! GTCAAGGTTTTAAATAGCGG+TGG - chr3_2:39588530-39588549 Msa0405200:CDS 40.0%
! TTTTAGACCCAGACTTCAAG+TGG - chr3_2:39588712-39588731 Msa0405200:intron 40.0%
ACACATTCCACTTGAAGTCT+GGG + chr3_2:39588722-39588741 None:intergenic 40.0%
AACACATTCCACTTGAAGTC+TGG + chr3_2:39588723-39588742 None:intergenic 40.0%
GACTATGACTATACCATACC+TGG + chr3_2:39588887-39588906 None:intergenic 40.0%
ACTCACGATGCTTGATATTG+CGG - chr3_2:39589091-39589110 Msa0405200:intron 40.0%
! AGCTGATATGGTCTTAATCG+TGG - chr3_2:39589132-39589151 Msa0405200:intron 40.0%
! GTTGTCATGGCGTTTTTGTT+TGG - chr3_2:39589319-39589338 Msa0405200:intron 40.0%
!! ATGGCGTTTTTGTTTGGGAT+AGG - chr3_2:39589325-39589344 Msa0405200:intron 40.0%
! ACTCTGCATACTGGTTATCA+TGG - chr3_2:39589372-39589391 Msa0405200:intron 40.0%
! TCTCTTCTCTTAGTTCTCAC+TGG - chr3_2:39589428-39589447 Msa0405200:CDS 40.0%
GGCTTCTCCGTATTTATTGT+CGG - chr3_2:39589708-39589727 Msa0405200:intron 40.0%
!! GGAGGTGTAAAAATTTTCCC+TGG - chr3_2:39589863-39589882 Msa0405200:intron 40.0%
CATAAATCTCGGTAATGACC+AGG + chr3_2:39589884-39589903 None:intergenic 40.0%
CTGGTCATTACCGAGATTTA+TGG - chr3_2:39589882-39589901 Msa0405200:intron 40.0%
TTCAACTCCTGAAGATAACG+GGG - chr3_2:39589961-39589980 Msa0405200:intron 40.0%
GAATGGAAGGGAGGAATAAA+AGG + chr3_2:39590164-39590183 None:intergenic 40.0%
AACGAACCACAGAAAGAATG+TGG + chr3_2:39590274-39590293 None:intergenic 40.0%
TCCTCACACCCATTTCATTT+GGG + chr3_2:39590323-39590342 None:intergenic 40.0%
TTCCTCACACCCATTTCATT+TGG + chr3_2:39590324-39590343 None:intergenic 40.0%
CTAAATCCTCGTTATTGGAC+AGG - chr3_2:39590360-39590379 Msa0405200:CDS 40.0%
GCATTTCTTTCATAGAGGGT+GGG - chr3_2:39590489-39590508 Msa0405200:intron 40.0%
GTAGTTGCATATCTTCAACC+CGG - chr3_2:39590516-39590535 Msa0405200:intron 40.0%
! AATGTTGCTGTTCAGGTACA+AGG - chr3_2:39590629-39590648 Msa0405200:CDS 40.0%
TTTACCTTAACAGCGTGGTA+AGG + chr3_2:39590719-39590738 None:intergenic 40.0%
GATGATTTACCTTAACAGCG+TGG + chr3_2:39590724-39590743 None:intergenic 40.0%
CATGCAAAACAACTGCTCAT+AGG - chr3_2:39590810-39590829 Msa0405200:intron 40.0%
TGCAAAACAACTGCTCATAG+GGG - chr3_2:39590812-39590831 Msa0405200:intron 40.0%
TATCCACAGTTTAACCCCAA+AGG - chr3_2:39590924-39590943 Msa0405200:CDS 40.0%
ATGCATAGGTCACTCCTATT+AGG + chr3_2:39591168-39591187 None:intergenic 40.0%
TAATAGGAGTGACCTATGCA+TGG - chr3_2:39591167-39591186 Msa0405200:intron 40.0%
CAAATTACTTTCAGGGCTTG+TGG - chr3_2:39591212-39591231 Msa0405200:intron 40.0%
CTTTCGAATGTTTGACATGC+CGG + chr3_2:39591511-39591530 None:intergenic 40.0%
TAGATATAGCAACGTCTGGT+TGG + chr3_2:39591621-39591640 None:intergenic 40.0%
CTGATAGATATAGCAACGTC+TGG + chr3_2:39591625-39591644 None:intergenic 40.0%
CAGACGTTGCTATATCTATC+AGG - chr3_2:39591623-39591642 Msa0405200:intron 40.0%
! TATTAGAGCATCTAGCTACC+AGG + chr3_2:39591673-39591692 None:intergenic 40.0%
ACAGTTTGATATCCTATGGG+AGG - chr3_2:39591836-39591855 Msa0405200:intron 40.0%
TACAGAAACATCATTGGCAG+AGG - chr3_2:39592018-39592037 Msa0405200:intron 40.0%
GTAACTTCCAGCTCTTACTT+TGG + chr3_2:39592062-39592081 None:intergenic 40.0%
GATGAACCGGTATGCAAAAA+AGG - chr3_2:39592151-39592170 Msa0405200:CDS 40.0%
CTGGTATGGATCCAATAACA+AGG - chr3_2:39592254-39592273 Msa0405200:intron 40.0%
GTATGGATCCAATAACAAGG+AGG - chr3_2:39592257-39592276 Msa0405200:intron 40.0%
! AATAACAAGGAGGCATGTGT+GGG - chr3_2:39592267-39592286 Msa0405200:intron 40.0%
CCTTTGCCATGATTCCTATA+CGG + chr3_2:39592372-39592391 None:intergenic 40.0%
CGTATAGGAATCATGGCAAA+GGG - chr3_2:39592370-39592389 Msa0405200:intron 40.0%
!! TTGAAGTCACGTTTTGGTAC+TGG - chr3_2:39592424-39592443 Msa0405200:intron 40.0%
AATGATCACAGTCCTGCAAA+TGG - chr3_2:39592478-39592497 Msa0405200:intron 40.0%
TGTGATTCCTCATGAAAGAG+AGG - chr3_2:39592678-39592697 Msa0405200:intron 40.0%
!! GGAGCTCTGAAAAGAAATTC+TGG + chr3_2:39593194-39593213 None:intergenic 40.0%
TGTCAAGGTCAAAGTCACTA+GGG + chr3_2:39593334-39593353 None:intergenic 40.0%
ATGTCAAGGTCAAAGTCACT+AGG + chr3_2:39593335-39593354 None:intergenic 40.0%
AAAATGCGGTTATACGTACC+TGG + chr3_2:39593371-39593390 None:intergenic 40.0%
TCTCTTGCAAAAAGTGAGCA+CGG - chr3_2:39593450-39593469 Msa0405200:intron 40.0%
!! CTCGAAAGTGCTTATGTAAG+TGG + chr3_2:39593523-39593542 None:intergenic 40.0%
ACAGGACCATAAACTAGTAC+TGG - chr3_2:39593722-39593741 Msa0405200:CDS 40.0%
TATTCAGTAGACTCTGATCC+TGG + chr3_2:39593903-39593922 None:intergenic 40.0%
! TGAATACCCCACAGGTTTTA+TGG - chr3_2:39593917-39593936 Msa0405200:CDS 40.0%
CTTCTACCATAAAACCTGTG+GGG + chr3_2:39593926-39593945 None:intergenic 40.0%
TCGAGATGGAAGAATTTGGA+GGG - chr3_2:39594258-39594277 Msa0405200:CDS 40.0%
TTGGTGAGAGGAGTTGAAGA+AGG + chr3_2:39586721-39586740 None:intergenic 45.0%
GATGGAGATGGAATCAATGG+TGG + chr3_2:39586830-39586849 None:intergenic 45.0%
ATAGCACCAGGACATTGCAT+AGG + chr3_2:39587046-39587065 None:intergenic 45.0%
TGTGATACCGAACACGCAAT+TGG - chr3_2:39587559-39587578 Msa0405200:intron 45.0%
TGAGTTTGTCAGAATCACGG+TGG - chr3_2:39587689-39587708 Msa0405200:CDS 45.0%
GAGTTTGTCAGAATCACGGT+GGG - chr3_2:39587690-39587709 Msa0405200:CDS 45.0%
! CGCAGCGTCATCAAAGATTT+TGG + chr3_2:39588171-39588190 None:intergenic 45.0%
TAGAGAAAGGAGCCATTCCT+GGG + chr3_2:39588764-39588783 None:intergenic 45.0%
ATGGCTCCTTTCTCTACAGT+TGG - chr3_2:39588768-39588787 Msa0405200:intron 45.0%
GAAAGAGCTTAAACTTCGCC+AGG - chr3_2:39588866-39588885 Msa0405200:CDS 45.0%
AGCTTAAACTTCGCCAGGTA+TGG - chr3_2:39588871-39588890 Msa0405200:CDS 45.0%
TTTGCATTCTCAACACAGGC+AGG + chr3_2:39588928-39588947 None:intergenic 45.0%
CTTGATATTGCGGAGAGTTG+TGG - chr3_2:39589101-39589120 Msa0405200:intron 45.0%
ACTGGTTATCATGGCTAACC+TGG - chr3_2:39589381-39589400 Msa0405200:intron 45.0%
CTGGTTATCATGGCTAACCT+GGG - chr3_2:39589382-39589401 Msa0405200:intron 45.0%
GAGTGTAACAACTGTTTCCC+AGG + chr3_2:39589402-39589421 None:intergenic 45.0%
TCATCTTCGGCAACAACAGT+CGG - chr3_2:39589687-39589706 Msa0405200:CDS 45.0%
!! TATTGTCGGCTTCATGACTC+AGG - chr3_2:39589722-39589741 Msa0405200:intron 45.0%
! TTGCAGATGGTGTCAACAGT+AGG - chr3_2:39589842-39589861 Msa0405200:intron 45.0%
CCTTGAGCAAAAGGATTAGG+CGG + chr3_2:39589917-39589936 None:intergenic 45.0%
AGGCCTTGAGCAAAAGGATT+AGG + chr3_2:39589920-39589939 None:intergenic 45.0%
CACACAGTCATCGTCGTTAA+CGG + chr3_2:39590014-39590033 None:intergenic 45.0%
TGAAATGCTGAATGGAAGGG+AGG + chr3_2:39590173-39590192 None:intergenic 45.0%
TTCTGGCCACATTCTTTCTG+TGG - chr3_2:39590265-39590284 Msa0405200:CDS 45.0%
TCCCAAATGAAATGGGTGTG+AGG - chr3_2:39590319-39590338 Msa0405200:CDS 45.0%
GACGGAGGACAAAAAGTGAA+AGG - chr3_2:39590384-39590403 Msa0405200:CDS 45.0%
CGCATTTCTTTCATAGAGGG+TGG - chr3_2:39590488-39590507 Msa0405200:intron 45.0%
TGGACTAAACTCTTCATGCC+GGG + chr3_2:39590537-39590556 None:intergenic 45.0%
! GTGGACTAAACTCTTCATGC+CGG + chr3_2:39590538-39590557 None:intergenic 45.0%
TCAAGGACGTCTTCATCATC+TGG + chr3_2:39590560-39590579 None:intergenic 45.0%
GTGAAGCAGCAACAAACACA+AGG - chr3_2:39590593-39590612 Msa0405200:CDS 45.0%
! TGACGCAAATGTTGCTGTTC+AGG - chr3_2:39590622-39590641 Msa0405200:CDS 45.0%
TGTTGTCGAGAGCCAACTAA+TGG + chr3_2:39590971-39590990 None:intergenic 45.0%
CTTGATCATCAGCCATGCAT+AGG + chr3_2:39591182-39591201 None:intergenic 45.0%
CTATGCATGGCTGATGATCA+AGG - chr3_2:39591180-39591199 Msa0405200:intron 45.0%
TCTATTAGGACCCAATGGAG+CGG - chr3_2:39591264-39591283 Msa0405200:CDS 45.0%
! GTAGTTTTTCCCGCTCCATT+GGG + chr3_2:39591277-39591296 None:intergenic 45.0%
! TGTAGTTTTTCCCGCTCCAT+TGG + chr3_2:39591278-39591297 None:intergenic 45.0%
GGGATAACTCCAGTAACTGA+TGG - chr3_2:39591316-39591335 Msa0405200:intron 45.0%
ACTCCAGTAACTGATGGAGA+TGG - chr3_2:39591322-39591341 Msa0405200:intron 45.0%
TCACCATCTCCATCAGTTAC+TGG + chr3_2:39591328-39591347 None:intergenic 45.0%
TGAGAGATGGAAACACACCT+GGG + chr3_2:39591550-39591569 None:intergenic 45.0%
ATGAGAGATGGAAACACACC+TGG + chr3_2:39591551-39591570 None:intergenic 45.0%
CAAACTAGCGGAACAAGTTC+AGG + chr3_2:39591947-39591966 None:intergenic 45.0%
GTAAGAGCTGGAAGTTACAG+TGG - chr3_2:39592064-39592083 Msa0405200:CDS 45.0%
! CACACATGCCTCCTTGTTAT+TGG + chr3_2:39592268-39592287 None:intergenic 45.0%
! CAATAACAAGGAGGCATGTG+TGG - chr3_2:39592266-39592285 Msa0405200:intron 45.0%
GACATTCTAAGCGACCGTAT+AGG - chr3_2:39592355-39592374 Msa0405200:intron 45.0%
AAGCGACCGTATAGGAATCA+TGG - chr3_2:39592363-39592382 Msa0405200:intron 45.0%
CCGTATAGGAATCATGGCAA+AGG - chr3_2:39592369-39592388 Msa0405200:intron 45.0%
ACGTGACTTCAATCTGATCG+AGG + chr3_2:39592416-39592435 None:intergenic 45.0%
CAAGAGTTGTTAGACCAAGC+TGG + chr3_2:39593251-39593270 None:intergenic 45.0%
!! TAGAAAGTGCTGCAGCTGAA+GGG - chr3_2:39593307-39593326 Msa0405200:intron 45.0%
GTGACTTTGACCTTGACATC+TGG - chr3_2:39593336-39593355 Msa0405200:intron 45.0%
TTGCAAAAAGTGAGCACGGA+TGG - chr3_2:39593454-39593473 Msa0405200:intron 45.0%
! TAGAGAGGCATGCCCTAAAA+TGG + chr3_2:39593763-39593782 None:intergenic 45.0%
TCCTGTAGGAGCTATGTATG+TGG - chr3_2:39593872-39593891 Msa0405200:CDS 45.0%
CCTGTAGGAGCTATGTATGT+GGG - chr3_2:39593873-39593892 Msa0405200:CDS 45.0%
GCTATGTATGTGGGATTTCC+AGG - chr3_2:39593882-39593901 Msa0405200:CDS 45.0%
TACTGGGAACAAGATGACAC+CGG - chr3_2:39593948-39593967 Msa0405200:CDS 45.0%
! GAATATGAGCTTTCTGGGAG+TGG + chr3_2:39593992-39594011 None:intergenic 45.0%
TTGCAGTAGCAGATGGTAGT+TGG + chr3_2:39594025-39594044 None:intergenic 45.0%
!!! AGTGATTTTGGGACACACTC+AGG - chr3_2:39594128-39594147 Msa0405200:CDS 45.0%
TGGAATCGGATATGTCGAGA+TGG - chr3_2:39594244-39594263 Msa0405200:CDS 45.0%
GTCGAGATGGAAGAATTTGG+AGG - chr3_2:39594257-39594276 Msa0405200:CDS 45.0%
CGAGATGGAAGAATTTGGAG+GGG - chr3_2:39594259-39594278 Msa0405200:CDS 45.0%
ATGGAAGAATTTGGAGGGGA+AGG - chr3_2:39594263-39594282 Msa0405200:CDS 45.0%
TGGAAGAATTTGGAGGGGAA+GGG - chr3_2:39594264-39594283 Msa0405200:CDS 45.0%
!!! TTTATTTAAAATCAAAATAT+GGG - chr3_2:39587904-39587923 Msa0405200:intron 5.0%
AGAGAGAAGAGAGGTGAGGA+AGG + chr3_2:39586555-39586574 None:intergenic 50.0%
AGAGAGAGAGAAGAGAGGTG+AGG + chr3_2:39586559-39586578 None:intergenic 50.0%
TCTGTTGTGTGAGGGAGAGA+GGG + chr3_2:39586582-39586601 None:intergenic 50.0%
CTCCTCTCTCTGTTGTGTGA+GGG + chr3_2:39586590-39586609 None:intergenic 50.0%
TCTCCTCTCTCTGTTGTGTG+AGG + chr3_2:39586591-39586610 None:intergenic 50.0%
GTAGAGAAAGGAGCCATTCC+TGG + chr3_2:39588765-39588784 None:intergenic 50.0%
GGATAGGCAATGACCGTGAT+GGG - chr3_2:39589341-39589360 Msa0405200:intron 50.0%
GATAGGCAATGACCGTGATG+GGG - chr3_2:39589342-39589361 Msa0405200:intron 50.0%
AGAGTCGTAAAGCCCCATCA+CGG + chr3_2:39589357-39589376 None:intergenic 50.0%
GGCTTTACGACTCTGCATAC+TGG - chr3_2:39589363-39589382 Msa0405200:intron 50.0%
! CAGATGGTGTCAACAGTAGG+AGG - chr3_2:39589845-39589864 Msa0405200:intron 50.0%
! CCGCCTAATCCTTTTGCTCA+AGG - chr3_2:39589914-39589933 Msa0405200:intron 50.0%
ACACTCAGGCCTTGAGCAAA+AGG + chr3_2:39589926-39589945 None:intergenic 50.0%
CAGCTAACCCCGTTATCTTC+AGG + chr3_2:39589971-39589990 None:intergenic 50.0%
!! CTGAAGATAACGGGGTTAGC+TGG - chr3_2:39589969-39589988 Msa0405200:intron 50.0%
! CGATGACTGTGTGCTGACAA+TGG - chr3_2:39590021-39590040 Msa0405200:intron 50.0%
CCTCGTTATTGGACAGGAGA+CGG - chr3_2:39590366-39590385 Msa0405200:CDS 50.0%
AGGACGTCTTCATCATCTGG+TGG + chr3_2:39590557-39590576 None:intergenic 50.0%
GGCATTGTGAAGACTTACCC+CGG - chr3_2:39590650-39590669 Msa0405200:CDS 50.0%
TGCTCCTTACCACGCTGTTA+AGG - chr3_2:39590712-39590731 Msa0405200:intron 50.0%
!! GAGCCTTTGGGGTTAAACTG+TGG + chr3_2:39590930-39590949 None:intergenic 50.0%
CTATTAGGACCCAATGGAGC+GGG - chr3_2:39591265-39591284 Msa0405200:CDS 50.0%
AATTCGGTCCGAAGCTCTAC+CGG - chr3_2:39591489-39591508 Msa0405200:CDS 50.0%
TTGACATGCCGGTAGAGCTT+CGG + chr3_2:39591500-39591519 None:intergenic 50.0%
GAGAGATGGAAACACACCTG+GGG + chr3_2:39591549-39591568 None:intergenic 50.0%
AGCATCTAGCTACCAGGTCA+GGG + chr3_2:39591667-39591686 None:intergenic 50.0%
! ATCCTATGGGAGGCTTTGTC+TGG - chr3_2:39591846-39591865 Msa0405200:intron 50.0%
ATTGGCAGAGGTGAGACTCA+CGG - chr3_2:39592030-39592049 Msa0405200:intron 50.0%
GATGCAGCCAAAGTAAGAGC+TGG - chr3_2:39592052-39592071 Msa0405200:intron 50.0%
AGAGCTGGAAGTTACAGTGG+AGG - chr3_2:39592067-39592086 Msa0405200:CDS 50.0%
GATGCTGTGTCACCATTTGC+AGG + chr3_2:39592493-39592512 None:intergenic 50.0%
AGCATCAGCAAGACATCGTG+AGG - chr3_2:39592507-39592526 Msa0405200:intron 50.0%
!! AGGAGTGCCTCTCTTTCATG+AGG + chr3_2:39592688-39592707 None:intergenic 50.0%
GGCATATCTGACATCCAGCT+TGG - chr3_2:39593234-39593253 Msa0405200:intron 50.0%
!! CTAGAAAGTGCTGCAGCTGA+AGG - chr3_2:39593306-39593325 Msa0405200:intron 50.0%
GACAGACTCTCCAGATGTCA+AGG + chr3_2:39593349-39593368 None:intergenic 50.0%
CCCACATACATAGCTCCTAC+AGG + chr3_2:39593876-39593895 None:intergenic 50.0%
GAGTCTACTGAATACCCCAC+AGG - chr3_2:39593909-39593928 Msa0405200:CDS 50.0%
ACCGGTACCCTTTGTATTGC+CGG - chr3_2:39593966-39593985 Msa0405200:CDS 50.0%
CGTTGTCTTGCAGTAGCAGA+TGG + chr3_2:39594032-39594051 None:intergenic 50.0%
AAGAATTTGGAGGGGAAGGG+AGG - chr3_2:39594267-39594286 Msa0405200:CDS 50.0%
GAGGGAGAGAGAGAGAAGAG+AGG + chr3_2:39586564-39586583 None:intergenic 55.0%
CTCTGTTGTGTGAGGGAGAG+AGG + chr3_2:39586583-39586602 None:intergenic 55.0%
CTCCCTCACACAACAGAGAG+AGG - chr3_2:39586585-39586604 Msa0405200:three_prime_UTR 55.0%
!! GTTGCCTCTTCAGCTTGCTG+CGG - chr3_2:39587171-39587190 Msa0405200:intron 55.0%
TGACGCTGCGGCTTAGATTG+TGG - chr3_2:39588181-39588200 Msa0405200:intron 55.0%
CATTGACAGCGATGCAGCTG+TGG + chr3_2:39588564-39588583 None:intergenic 55.0%
CACAGCTGCATCGCTGTCAA+TGG - chr3_2:39588562-39588581 Msa0405200:CDS 55.0%
TTCAAGGAATTCCCGCACCC+AGG - chr3_2:39588744-39588763 Msa0405200:intron 55.0%
AAAGGAGCCATTCCTGGGTG+CGG + chr3_2:39588759-39588778 None:intergenic 55.0%
GGGATAGGCAATGACCGTGA+TGG - chr3_2:39589340-39589359 Msa0405200:intron 55.0%
AGGCCTGAGTGTGCTTGCAA+AGG - chr3_2:39589934-39589953 Msa0405200:intron 55.0%
CAGCCTTTGCAAGCACACTC+AGG + chr3_2:39589940-39589959 None:intergenic 55.0%
!! GGGGTTAGCTGGAATACACG+AGG - chr3_2:39589980-39589999 Msa0405200:intron 55.0%
CCGTCTCCTGTCCAATAACG+AGG + chr3_2:39590369-39590388 None:intergenic 55.0%
CGTTATTGGACAGGAGACGG+AGG - chr3_2:39590369-39590388 Msa0405200:CDS 55.0%
TCAGTGATTCCTCCCTGACC+TGG - chr3_2:39591652-39591671 Msa0405200:intron 55.0%
ATCTAGCTACCAGGTCAGGG+AGG + chr3_2:39591664-39591683 None:intergenic 55.0%
GAGCATCTAGCTACCAGGTC+AGG + chr3_2:39591668-39591687 None:intergenic 55.0%
GACCAGACAAAGCCTCCCAT+AGG + chr3_2:39591851-39591870 None:intergenic 55.0%
TAGCGGAACAAGTTCAGGCC+TGG + chr3_2:39591942-39591961 None:intergenic 55.0%
AAGGGAAAGCTGCGCTGCAT+TGG - chr3_2:39592388-39592407 Msa0405200:intron 55.0%
GACATCTGGAGAGTCTGTCC+AGG - chr3_2:39593350-39593369 Msa0405200:intron 55.0%
! GCCGGCAATACAAAGGGTAC+CGG + chr3_2:39593970-39593989 None:intergenic 55.0%
GGAGTGGCCGGCAATACAAA+GGG + chr3_2:39593976-39593995 None:intergenic 55.0%
! ATGAGCTTTCTGGGAGTGGC+CGG + chr3_2:39593988-39594007 None:intergenic 55.0%
CTGCTACTGCAAGACAACGC+CGG - chr3_2:39594033-39594052 Msa0405200:CDS 55.0%
CTCCATGAACTGACCCTGAC+CGG + chr3_2:39594055-39594074 None:intergenic 55.0%
CTGCGGAGCGTGAAATCGCT+AGG - chr3_2:39587188-39587207 Msa0405200:intron 60.0%
GGAATTCCCGCACCCAGGAA+TGG - chr3_2:39588749-39588768 Msa0405200:intron 60.0%
AAGGAGCCATTCCTGGGTGC+GGG + chr3_2:39588758-39588777 None:intergenic 60.0%
GGGAGTGGCCGGCAATACAA+AGG + chr3_2:39593977-39593996 None:intergenic 60.0%
ACTGCAAGACAACGCCGGTC+AGG - chr3_2:39594038-39594057 Msa0405200:CDS 60.0%
CTGCAAGACAACGCCGGTCA+GGG - chr3_2:39594039-39594058 Msa0405200:CDS 60.0%
CGCTCCGCAGCAAGCTGAAG+AGG + chr3_2:39587178-39587197 None:intergenic 65.0%
CGCCGGTCAGGGTCAGTTCA+TGG - chr3_2:39594050-39594069 Msa0405200:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 39586541 39594403 39586541 ID=Msa0405200;Name=Msa0405200
chr3_2 mRNA 39586541 39594403 39586541 ID=Msa0405200-mRNA-1;Parent=Msa0405200;Name=Msa0405200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=88|0.92|0.93|1|1|1|15|285|947
chr3_2 exon 39586541 39587074 39586541 ID=Msa0405200-mRNA-1:exon:7754;Parent=Msa0405200-mRNA-1
chr3_2 exon 39587573 39587749 39587573 ID=Msa0405200-mRNA-1:exon:7753;Parent=Msa0405200-mRNA-1
chr3_2 exon 39588233 39588313 39588233 ID=Msa0405200-mRNA-1:exon:7752;Parent=Msa0405200-mRNA-1
chr3_2 exon 39588392 39588694 39588392 ID=Msa0405200-mRNA-1:exon:7751;Parent=Msa0405200-mRNA-1
chr3_2 exon 39588785 39588928 39588785 ID=Msa0405200-mRNA-1:exon:7750;Parent=Msa0405200-mRNA-1
chr3_2 exon 39589015 39589104 39589015 ID=Msa0405200-mRNA-1:exon:7749;Parent=Msa0405200-mRNA-1
chr3_2 exon 39589393 39589469 39589393 ID=Msa0405200-mRNA-1:exon:7748;Parent=Msa0405200-mRNA-1
chr3_2 exon 39589601 39589718 39589601 ID=Msa0405200-mRNA-1:exon:7747;Parent=Msa0405200-mRNA-1
chr3_2 exon 39590211 39590440 39590211 ID=Msa0405200-mRNA-1:exon:7746;Parent=Msa0405200-mRNA-1
chr3_2 exon 39590539 39590698 39590539 ID=Msa0405200-mRNA-1:exon:7745;Parent=Msa0405200-mRNA-1
chr3_2 exon 39590902 39591096 39590902 ID=Msa0405200-mRNA-1:exon:7744;Parent=Msa0405200-mRNA-1
chr3_2 exon 39591228 39591296 39591228 ID=Msa0405200-mRNA-1:exon:7743;Parent=Msa0405200-mRNA-1
chr3_2 exon 39591412 39591597 39591412 ID=Msa0405200-mRNA-1:exon:7742;Parent=Msa0405200-mRNA-1
chr3_2 exon 39592057 39592226 39592057 ID=Msa0405200-mRNA-1:exon:7741;Parent=Msa0405200-mRNA-1
chr3_2 exon 39593721 39594403 39593721 ID=Msa0405200-mRNA-1:exon:7740;Parent=Msa0405200-mRNA-1
chr3_2 five_prime_UTR 39594316 39594403 39594316 ID=Msa0405200-mRNA-1:five_prime_utr;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39593721 39594315 39593721 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39592057 39592226 39592057 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39591412 39591597 39591412 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39591228 39591296 39591228 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39590902 39591096 39590902 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39590539 39590698 39590539 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39590211 39590440 39590211 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39589601 39589718 39589601 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39589393 39589469 39589393 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39589015 39589104 39589015 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39588785 39588928 39588785 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39588392 39588694 39588392 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39588233 39588313 39588233 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39587573 39587749 39587573 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 CDS 39586826 39587074 39586826 ID=Msa0405200-mRNA-1:cds;Parent=Msa0405200-mRNA-1
chr3_2 three_prime_UTR 39586541 39586825 39586541 ID=Msa0405200-mRNA-1:three_prime_utr;Parent=Msa0405200-mRNA-1
Gene Sequence

>Msa0405200

ATGACAAACGCTTTTACGTTGGTAACACAACAATACCAAGCGTTGCTTAAAAAAAACATATTACTCTCATGGCGCAGCAAAAGATCAATCCTTCTTCAACTCCTCTCACCAATCTTCTTCATTTTCCTAATCTTCGCCATAGACAAAGCAATAAAAGCACAATCATCAACAACTTCTGCATTCAAAGAAATCAGAAACCCACCATTGATTCCATCTCCATCAATCAAACCTTGTGAGGAGAAATTCTTCATGAAAATGCCGTGTTATGATTTCATTTGGAGCGGTGATGATGATCCAAAGTTTCGTACGATTGTTGAGAGGATAATTAAGAATAATCCTGGTAGAGAAATACCTGTTGAAAAGGTGAAGAGTTTTCGTGATAAGAATGAAGTTGATGATTGGTTGTTTAAGAATCCTATGCAATGTCCTGGTGCTATTCATTTTAGTGAAAAGAATGGAAGTATTATTAGTTATGGGATTCAGACAAATTCTACTAGTGTTCAGAAACGTGGCAAGTATGAAGATCCTACTTTTGATTTTCAGTTGCCTCTTCAGCTTGCTGCGGAGCGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGACTTCAAGTGGAATGTGTTTTTCAAGGAATTCCCGCACCCAGGAATGGCTCCTTTCTCTACAGTTGGATCAATGGGTCCAACATTTTTTCTTGCAACTGCTATGTTTAATTTCGTTCTTCAGATAAGTTCATTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCATACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACACTCATATCATCTCTTCTCTTAGTTCTCACTGGCATGATGTTTCAGTTTGATTTCTTCTTGAAAAACAGTTTCGCTGTTCTGTTCTTTTTGTTCTTCCTATTTGAACTCAACATGACTGGGTTTGCCTTCTTGTTATCAGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTCTCCATGGTGTCAACAGTAGGAGGTGTAAAAATTTTCCCTGGTCATTACCGAGATTTATGGTTATTGTTTCCGCCTAATCCTTTTGCTCAAGGCCTGAGTGTGCTTGCAAAGGCTGTTTCAACTCCTGAAGATAACGGGGTTAGCTGGAATACACGAGGAAAATGTGCCGTTAACGACGATGACTGTGTGCTGACAATGAATGATATTTATATACGGCTTCTGGCCACATTCTTTCTGTGGTTCGTTCTTGCCATCTACTTTGACAATATAATCCCAAATGAAATGGGTGTGAGGAAATCTGTGTTGTACTTTCTAAATCCTCGTTATTGGACAGGAGACGGAGGACAAAAAGTGAAAGAGGGTGGGATTTGTAGTTGCATATCTTCAACCCGGCATGAAGAGTTTAGTCCACCAGATGATGAAGACGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACAAACACAAGGTATTGTTGACGCAAATGTTGCTGTTCAGGTACAAGGCATTGTGAAGACTTACCCCGGTATATTTAAATTTGGTTGCTGCTGTAACTGTAAAAGAACTGCTCCTTACCACGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGAATCAGTTATTTTGTCTATTAGGACCCAATGGAGCGGGAAAAACTACAGCTATTAGTTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGGAATTCGGTCCGAAGCTCTACCGGCATGTCAAACATTCGAAAGATTATTGGAGTGTGTCCCCAGTTTGATATCCTATGGGAGGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCTCTAGAATTAAAGGGCTGTCCCCAGATTCTATAAAATCAATTACAGAAACATCATTGGCAGAGGTGAGACTCACGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTCAGTGTTGCAATTGCACTTATCGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGCGACCGTATAGGAATCATGGCAAAGGGAAAGCTGCGCTGCATTGGAACCTCGATCAGATTGAAGTCACGTTTTGGTACTGGCTTTATTACAAATATTAGCTTCGCAAACAACAATGATCACAGTCCTGCAAATGGTGACACAGCATCAGCAAGACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTCCTAACTTATGTGATTCCTCATGAAAGAGAGGCACTCCTTACAAATTTCTTTTCAGAGCTCCAAGATAGAAAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAGGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGACCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTAGGAGCTATGTATGTGGGATTTCCAGGATCAGAGTCTACTGAATACCCCACAGGTTTTATGGTAGAAGTATACTGGGAACAAGATGACACCGGTACCCTTTGTATTGCCGGCCACTCCCAGAAAGCTCATATTCCTCAAAATATCCAACTACCATCTGCTACTGCAAGACAACGCCGGTCAGGGTCAGTTCATGGAGTTGTGATTGATCCAAATCAAGTTAGTTCAGACAGTTTTCGGTGA
Protein sequence

>Msa0405200

MTNAFTLVTQQYQALLKKNILLSWRSKRSILLQLLSPIFFIFLIFAIDKAIKAQSSTTSAFKEIRNPPLIPSPSIKPCEEKFFMKMPCYDFIWSGDDDPKFRTIVERIIKNNPGREIPVEKVKSFRDKNEVDDWLFKNPMQCPGAIHFSEKNGSIISYGIQTNSTSVQKRGKYEDPTFDFQLPLQLAAEREIARFLIGDPDFKWNVFFKEFPHPGMAPFSTVGSMGPTFFLATAMFNFVLQISSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTLISSLLLVLTGMMFQFDFFLKNSFAVLFFLFFLFELNMTGFAFLLSAFIRKSSSATTVGFSMVSTVGGVKIFPGHYRDLWLLFPPNPFAQGLSVLAKAVSTPEDNGVSWNTRGKCAVNDDDCVLTMNDIYIRLLATFFLWFVLAIYFDNIIPNEMGVRKSVLYFLNPRYWTGDGGQKVKEGGICSCISSTRHEEFSPPDDEDVLEEENVVKQQQTQGIVDANVAVQVQGIVKTYPGIFKFGCCCNCKRTAPYHAVKGLWVNFTKNQLFCLLGPNGAGKTTAISCLTGITPVTDGDALIYGNSVRSSTGMSNIRKIIGVCPQFDILWEALSGQEHLELFSRIKGLSPDSIKSITETSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFANNNDHSPANGDTASARHREAVKQFFKNHLDVVPKEENNNFLTYVIPHEREALLTNFFSELQDRKEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGTLVTLTLTSGESVQIPVGAMYVGFPGSESTEYPTGFMVEVYWEQDDTGTLCIAGHSQKAHIPQNIQLPSATARQRRSGSVHGVVIDPNQVSSDSFR*