AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261960 MtrunA17_Chr4g0063141 96.861 892 23 2 1 892 1 887 0.0 1790
Msa1261960 MtrunA17_Chr1g0148981 47.300 1000 359 14 19 872 24 1001 0.0 879
Msa1261960 MtrunA17_Chr2g0277651 46.834 679 346 6 28 702 47 714 0.0 632
Msa1261960 MtrunA17_Chr8g0356081 57.411 479 195 4 26 502 20 491 0.0 562
Msa1261960 MtrunA17_Chr3g0138131 63.793 406 139 5 18 421 34 433 2.14e-178 523
Msa1261960 MtrunA17_Chr2g0286031 43.208 773 303 24 128 876 17 677 2.92e-174 521
Msa1261960 MtrunA17_Chr3g0138671 48.893 497 241 6 23 513 20 509 1.50e-158 478
Msa1261960 MtrunA17_Chr3g0138141 51.562 448 201 5 433 874 11 448 8.86e-149 446
Msa1261960 MtrunA17_Chr5g0434371 34.103 736 450 14 10 732 45 758 3.16e-129 409
Msa1261960 MtrunA17_Chr4g0009161 88.430 121 10 2 424 541 6 125 4.81e-61 206
Msa1261960 MtrunA17_Chr4g0063071 38.095 252 152 1 271 518 5 256 4.06e-46 166
Msa1261960 MtrunA17_Chr2g0286041 53.913 115 53 0 11 125 16 130 5.92e-37 135
Msa1261960 MtrunA17_Chr4g0062571 35.776 232 130 8 77 306 2 216 4.04e-28 113
Msa1261960 MtrunA17_Chr4g0062561 35.319 235 132 8 77 306 2 221 5.13e-27 118
Msa1261960 MtrunA17_Chr4g0063081 31.606 193 128 3 58 249 3 192 1.11e-24 102
Msa1261960 MtrunA17_Chr4g0073941 21.042 480 299 8 46 446 99 577 7.07e-23 104
Msa1261960 MtrunA17_Chr8g0347121 21.609 435 258 9 87 446 113 539 2.13e-19 93.6
Msa1261960 MtrunA17_Chr4g0001481 20.623 514 301 16 24 446 85 582 1.78e-17 87.4
Msa1261960 MtrunA17_Chr1g0181121 20.782 486 291 15 45 446 43 518 4.74e-16 82.8
Msa1261960 MtrunA17_Chr2g0326871 19.880 498 323 10 24 446 55 551 1.79e-15 80.9
Msa1261960 MtrunA17_Chr6g0461061 27.053 207 126 3 530 712 250 455 2.95e-15 79.7
Msa1261960 MtrunA17_Chr6g0461061 35.833 120 76 1 526 644 367 486 7.69e-11 65.9
Msa1261960 MtrunA17_Chr5g0418551 30.625 160 79 1 530 689 97 224 1.85e-14 74.3
Msa1261960 MtrunA17_Chr5g0418551 29.655 145 96 3 585 724 50 193 4.16e-11 64.3
Msa1261960 MtrunA17_Chr3g0126541 25.243 206 149 4 244 446 352 555 2.96e-13 73.9
Msa1261960 MtrunA17_Chr1g0170401 33.962 106 69 1 317 421 22 127 4.80e-13 67.0
Msa1261960 MtrunA17_Chr3g0125651 25.688 218 152 5 232 446 307 517 9.62e-13 72.0
Msa1261960 MtrunA17_Chr1g0158861 19.286 420 263 11 96 446 145 557 1.14e-12 72.0
Msa1261960 MtrunA17_Chr4g0028861 22.791 215 163 2 234 446 385 598 1.27e-12 71.6
Msa1261960 MtrunA17_Chr3g0129271 85.000 40 3 1 505 541 1 40 2.65e-12 68.2
Msa1261960 MtrunA17_Chr5g0405531 55.769 52 20 1 242 290 15 66 3.25e-12 66.2
Msa1261960 MtrunA17_Chr5g0443471 32.500 160 93 2 459 618 1 145 7.87e-12 68.6
Msa1261960 MtrunA17_Chr2g0327711 30.102 196 125 8 529 715 107 299 1.58e-11 67.8
Msa1261960 MtrunA17_Chr1g0180301 29.560 159 85 3 550 708 65 196 2.72e-11 63.9
Msa1261960 MtrunA17_Chr5g0405451 33.824 136 87 2 560 693 273 407 2.77e-11 66.6
Msa1261960 MtrunA17_Chr1g0196261 27.500 200 133 3 530 728 260 448 3.22e-11 66.6
Msa1261960 MtrunA17_Chr2g0284901 39.785 93 56 0 521 613 36 128 3.99e-11 66.2
Msa1261960 MtrunA17_Chr7g0218341 28.804 184 128 3 240 422 387 568 5.70e-11 66.6
Msa1261960 MtrunA17_Chr4g0049351 30.000 170 115 3 544 710 45 213 8.14e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261960 AT2G26650.1 70.218 873 228 13 7 873 7 853 0.0 1252
Msa1261960 AT2G26650.2 69.509 774 207 11 103 873 1 748 0.0 1095
Msa1261960 AT2G25600.1 62.471 866 302 9 14 873 36 884 0.0 1089
Msa1261960 AT4G32500.1 60.920 870 307 11 14 874 32 877 0.0 1069
Msa1261960 AT4G22200.1 46.618 680 345 9 9 680 28 697 0.0 610
Msa1261960 AT5G46240.1 60.377 477 180 4 24 498 29 498 0.0 597
Msa1261960 AT4G18290.2 59.596 495 191 4 24 516 40 527 0.0 588
Msa1261960 AT4G18290.1 59.596 495 191 4 24 516 29 516 0.0 588
Msa1261960 AT4G22200.2 48.750 560 270 8 9 560 28 578 3.03e-174 518
Msa1261960 AT4G32650.2 47.444 489 250 5 23 508 54 538 1.21e-145 444
Msa1261960 AT4G32650.3 47.444 489 250 5 23 508 54 538 1.34e-145 446
Msa1261960 AT4G32650.1 47.444 489 250 5 23 508 54 538 1.88e-145 446
Msa1261960 AT5G37500.1 36.496 685 403 14 46 716 57 723 1.09e-129 409
Msa1261960 AT3G02850.2 35.354 693 414 14 43 721 71 743 4.64e-128 403
Msa1261960 AT3G02850.1 35.354 693 414 14 43 721 71 743 1.60e-127 404
Msa1261960 AT5G37500.2 35.361 707 403 15 46 716 57 745 1.54e-124 397
Msa1261960 AT5G37500.3 35.235 701 400 15 52 716 9 691 2.55e-123 392
Msa1261960 AT5G37500.4 35.651 676 381 15 46 685 57 714 4.26e-122 386
Msa1261960 AT3G02850.3 35.161 529 318 10 43 560 71 585 3.10e-98 320
Msa1261960 AT1G15990.1 21.193 486 296 10 46 446 90 573 2.37e-21 100
Msa1261960 AT4G30560.1 20.661 484 299 10 46 446 103 584 1.10e-20 98.2
Msa1261960 AT4G30560.4 20.661 484 299 10 46 446 103 584 1.10e-20 98.2
Msa1261960 AT4G30560.5 20.661 484 299 10 46 446 77 558 1.46e-20 97.8
Msa1261960 AT4G30560.2 20.661 484 299 10 46 446 77 558 1.46e-20 97.8
Msa1261960 AT4G30560.3 20.661 484 299 10 46 446 77 558 1.46e-20 97.8
Msa1261960 AT1G01340.2 21.807 509 310 15 43 467 65 569 3.68e-17 87.0
Msa1261960 AT1G01340.1 21.807 509 310 15 43 467 60 564 4.53e-17 86.7
Msa1261960 AT4G01010.1 21.444 457 276 11 87 467 121 570 8.08e-17 85.9
Msa1261960 AT4G01010.2 21.444 457 276 11 87 467 121 570 8.08e-17 85.9
Msa1261960 AT2G23980.9 25.243 206 151 2 243 446 381 585 3.26e-16 84.0
Msa1261960 AT2G23980.10 25.243 206 151 2 243 446 381 585 3.26e-16 84.0
Msa1261960 AT2G23980.1 25.243 206 151 2 243 446 381 585 3.26e-16 84.0
Msa1261960 AT2G23980.4 25.243 206 151 2 243 446 381 585 3.26e-16 84.0
Msa1261960 AT2G23980.5 25.243 206 151 2 243 446 381 585 3.26e-16 84.0
Msa1261960 AT2G23980.6 25.243 206 151 2 243 446 354 558 3.58e-16 83.6
Msa1261960 AT2G23980.3 25.243 206 151 2 243 446 404 608 3.83e-16 83.6
Msa1261960 AT2G23980.2 25.243 206 151 2 243 446 404 608 3.83e-16 83.6
Msa1261960 AT2G23980.8 25.243 206 151 2 243 446 404 608 3.83e-16 83.6
Msa1261960 AT2G23980.7 25.243 206 151 2 243 446 404 608 3.83e-16 83.6
Msa1261960 AT5G57940.1 25.714 210 153 2 239 446 361 569 7.54e-16 82.8
Msa1261960 AT5G57940.2 25.714 210 153 2 239 446 361 569 7.54e-16 82.8
Msa1261960 AT5G57940.3 25.714 210 153 2 239 446 354 562 7.67e-16 82.8
Msa1261960 AT2G46430.1 20.477 503 288 13 46 454 72 556 1.98e-15 81.3
Msa1261960 AT2G46430.2 20.477 503 288 13 46 454 72 556 1.98e-15 81.3
Msa1261960 AT1G19780.2 23.923 209 156 2 240 446 161 368 3.65e-15 80.1
Msa1261960 AT1G19780.1 23.923 209 156 2 240 446 372 579 5.97e-15 79.7
Msa1261960 AT2G28260.1 19.561 501 319 13 24 446 48 542 1.19e-14 78.6
Msa1261960 AT2G28260.2 19.561 501 319 13 24 446 8 502 3.14e-14 77.4
Msa1261960 AT5G53130.1 18.519 432 289 10 77 446 127 557 4.24e-14 77.0
Msa1261960 AT2G03430.1 32.500 160 76 1 530 689 90 217 7.98e-13 69.7
Msa1261960 AT3G48010.1 19.722 431 268 11 91 446 101 528 1.67e-12 72.0
Msa1261960 AT2G31800.1 43.158 95 54 0 521 615 73 167 1.11e-11 68.6
Msa1261960 AT5G02620.4 29.592 196 126 7 529 715 97 289 3.09e-11 67.4
Msa1261960 AT5G02620.1 29.592 196 126 7 529 715 97 289 3.09e-11 67.4
Msa1261960 AT5G02620.3 29.592 196 126 7 529 715 97 289 3.09e-11 67.4
Msa1261960 AT5G15410.1 27.650 217 151 5 240 453 395 608 4.13e-11 67.4
Msa1261960 AT5G14870.1 22.330 206 157 2 243 446 316 520 4.27e-11 67.4
Msa1261960 AT5G15410.2 27.650 217 151 5 240 453 394 607 4.49e-11 67.4
Msa1261960 AT2G43850.1 41.053 95 56 0 521 615 76 170 7.29e-11 66.2
Msa1261960 AT2G43850.2 41.053 95 56 0 521 615 76 170 7.48e-11 66.2
Msa1261960 AT2G43850.3 41.053 95 56 0 521 615 76 170 7.53e-11 65.9

Find 198 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTGGATCTAAGAAATT+TGG 0.159426 8_2:-64434218 Msa1261960:CDS
TCTTACGCCTTGGTCGATTT+TGG 0.184648 8_2:+64434450 None:intergenic
TTTCAAGAGTTACTTGAAAT+TGG 0.187237 8_2:-64434233 Msa1261960:CDS
AAGAAGGTTATTCATGATTA+TGG 0.214802 8_2:+64436664 None:intergenic
TATTTCCAAGCAATCTGTTT+TGG 0.232434 8_2:+64438467 None:intergenic
ACCAAAACTCCCTCCATAAT+TGG 0.233288 8_2:+64436540 None:intergenic
AGTAACTCTTGAAAACTTTC+AGG 0.236660 8_2:+64434242 None:intergenic
TGGGTATCTCCATTTGAATT+TGG 0.237646 8_2:-64438620 Msa1261960:CDS
TTGATAATTCAAGTTCTTCT+TGG 0.249005 8_2:+64440570 None:intergenic
TCCAATTATGGAGGGAGTTT+TGG 0.253826 8_2:-64436541 Msa1261960:CDS
GTGGTTCCAACGCTGTTATT+TGG 0.284651 8_2:+64434785 None:intergenic
CTTACTATTATCTTCTCCTT+TGG 0.288283 8_2:+64434607 None:intergenic
ATTATCGTAAGTACACATTA+TGG 0.303901 8_2:+64434053 None:intergenic
ATGCTTGATCTGATGGCTTT+AGG 0.306463 8_2:+64437357 None:intergenic
AACTTTCATAATTCACTCTT+CGG 0.310197 8_2:-64434422 Msa1261960:CDS
TTTAACTCTCCGGTTACTTC+TGG 0.312354 8_2:+64440496 None:intergenic
TGATTTCTGTATGTCCTTGT+TGG 0.313279 8_2:+64434645 None:intergenic
TGTAAGATAACATCTTCTTT+AGG 0.317107 8_2:+64437121 None:intergenic
CCAAATGAATCTGACAATAA+TGG 0.317153 8_2:-64436402 Msa1261960:CDS
AATCATGAATAACCTTCTTC+AGG 0.328424 8_2:-64436660 Msa1261960:intron
TGAATCAGTAACAAAACTTT+TGG 0.330718 8_2:-64434927 Msa1261960:CDS
CTCCTTATGATCGTCGTTAC+CGG 0.333638 8_2:-64440454 Msa1261960:intron
CCATTATTGTCAGATTCATT+TGG 0.334448 8_2:+64436402 None:intergenic
ACAATTGTTAAAACGAGGTT+TGG 0.336188 8_2:-64436427 Msa1261960:CDS
TCGCGGTAGGATGGACTTAC+CGG 0.346383 8_2:-64436496 Msa1261960:CDS
ACAAAGGTTGTTTGCAAAGA+TGG 0.348494 8_2:-64434185 Msa1261960:CDS
TGTTAGCACCATGTTCTAAT+AGG 0.348874 8_2:+64434714 None:intergenic
AACAATTAGTTGTCCTGAAA+AGG 0.352253 8_2:-64434294 Msa1261960:CDS
GACAATTTCAACACTGTCTT+CGG 0.357495 8_2:+64434742 None:intergenic
TCGCCAATCCATGTCTTTGC+TGG 0.359083 8_2:+64437831 None:intergenic
AAATGATTTGCTCTTTCAAT+TGG 0.360734 8_2:-64437277 Msa1261960:intron
AACCTTCTTTGTGGCTTACC+TGG 0.361868 8_2:-64438519 Msa1261960:CDS
TCTTGAGGTGTAGGCATTGT+TGG 0.364189 8_2:+64434506 None:intergenic
AGAGCTGAACGATCCAATTA+TGG 0.367123 8_2:-64436553 Msa1261960:CDS
CTTGTAGACGAGGAGGTAAT+TGG 0.367960 8_2:+64437460 None:intergenic
ATTGACAAACAAGATAAATA+TGG 0.369621 8_2:-64434692 Msa1261960:CDS
CCTGAAAAGGGTGAGGTTGC+TGG 0.373166 8_2:-64434281 Msa1261960:CDS
TATTCAACATGCTTAGGCTT+TGG 0.375101 8_2:-64438352 Msa1261960:CDS
TTTCTATTCTCTGATGGATA+AGG 0.375315 8_2:-64437322 Msa1261960:CDS
CTATCCTGCCTCTCAGGAAT+AGG 0.383653 8_2:+64434563 None:intergenic
ATTAGAGGGTGTTGTACAAT+TGG 0.384084 8_2:+64434085 None:intergenic
CCTCAAGATGGACCATTTCA+TGG 0.385679 8_2:-64434491 Msa1261960:CDS
TATAGTTCTAACCTTCTTTG+TGG 0.388479 8_2:-64438528 Msa1261960:CDS
GTTACAGATAATATTGTCAA+TGG 0.388775 8_2:-64438566 Msa1261960:CDS
ACTTTCATAATTCACTCTTC+GGG 0.388959 8_2:-64434421 Msa1261960:CDS
CTCGGAGGGCTTGCAGCAAC+AGG 0.388996 8_2:-64437397 Msa1261960:CDS
TGTTGGTCAGCTAAATCTCT+TGG 0.395126 8_2:+64434662 None:intergenic
CTTGGAAATATGCAAGAACT+TGG 0.401223 8_2:-64438454 Msa1261960:CDS
GCTGCAAAGCATAGACTTAC+CGG 0.406634 8_2:+64436477 None:intergenic
ACTTTGACAACAGTTGGTTA+TGG 0.407995 8_2:-64437738 Msa1261960:CDS
CTATTTGCTGTGCACTGTGC+TGG 0.409744 8_2:-64437891 Msa1261960:CDS
AACCGTGTACTAACAACTAC+TGG 0.412125 8_2:-64440662 Msa1261960:five_prime_UTR
TCTTGGCCACACATAGTCAT+TGG 0.414092 8_2:+64440587 None:intergenic
TCTCAAAGGCGGGGTTGAAC+AGG 0.416047 8_2:-64436935 Msa1261960:intron
GGAGAACTTTGTGGCGAGAT+TGG 0.419836 8_2:-64436803 Msa1261960:CDS
TTAAGGAATCCAAATTCAAA+TGG 0.420962 8_2:+64438611 None:intergenic
AATGGTGCTACCTTGCAAAT+TGG 0.426790 8_2:-64434899 Msa1261960:CDS
TCAAATATGTCAATTATCAT+TGG 0.432061 8_2:+64434014 None:intergenic
ATTGGTTGTGTATACTGCTT+GGG 0.432083 8_2:-64438639 Msa1261960:CDS
GGTAATTGATTTCAGATTGT+CGG 0.435654 8_2:-64436839 Msa1261960:intron
ACTTTACTATCCTGCCTCTC+AGG 0.438582 8_2:+64434557 None:intergenic
TTATGGATTGACACCATTAG+AGG 0.439624 8_2:+64434070 None:intergenic
AAAGCCTAAGCATGTTGAAT+AGG 0.440645 8_2:+64438354 None:intergenic
CAACTAATTGTTACTCTGGT+TGG 0.446246 8_2:+64434305 None:intergenic
CAACAGTTGACTTAATCGTT+TGG 0.446381 8_2:+64436742 None:intergenic
AAAACTTGATGCAGCTTGTA+TGG 0.447111 8_2:+64437494 None:intergenic
TACCGGTAACGACGATCATA+AGG 0.451804 8_2:+64440452 None:intergenic
AATTGTACAACACCCTCTAA+TGG 0.453079 8_2:-64434083 Msa1261960:CDS
CATTGGTTGTGTATACTGCT+TGG 0.454787 8_2:-64438640 Msa1261960:CDS
GAACCATCATTTCCATGAAA+TGG 0.456733 8_2:+64434479 None:intergenic
TGAATATTTACCTCTAACGT+TGG 0.456892 8_2:+64436214 None:intergenic
CTATGCTTTGCAGCAGAAAG+AGG 0.457199 8_2:-64436468 Msa1261960:CDS
GGATAAGGTTTACTTATTCA+AGG 0.459264 8_2:-64437307 Msa1261960:CDS
ATTGTCGGTGAGGCGAAAAC+AGG 0.459413 8_2:-64436824 Msa1261960:CDS
GGGGCAAATCCCAACGTTAG+AGG 0.463630 8_2:-64436224 Msa1261960:intron
ACTTGGTAGTTCTCAAAGGC+GGG 0.467309 8_2:-64436945 Msa1261960:CDS
GGACCATTTCATGGAAATGA+TGG 0.467455 8_2:-64434482 Msa1261960:CDS
AATATTATCTGTAACAGAAA+GGG 0.469418 8_2:+64438574 None:intergenic
GCACTGTGGGAGGCTATACT+TGG 0.472097 8_2:-64434956 Msa1261960:CDS
ATCATCTCCCTTTCATTCAC+CGG 0.475138 8_2:+64437705 None:intergenic
AATTTACTTGCAGATTCTGA+TGG 0.478811 8_2:-64434986 Msa1261960:intron
ACCGGAATATTACCTTCTCT+TGG 0.480108 8_2:-64440521 Msa1261960:CDS
GGAAACTTTCCTTGTTACAT+TGG 0.482337 8_2:-64438657 Msa1261960:CDS
GAATATTTACCTCTAACGTT+GGG 0.484672 8_2:+64436215 None:intergenic
CAATAATGGAAGGACAGCTT+TGG 0.484704 8_2:-64436388 Msa1261960:intron
ATGGCCTATTCAACATGCTT+AGG 0.485900 8_2:-64438358 Msa1261960:CDS
ATAACCCAAAACAGATTGCT+TGG 0.486830 8_2:-64438472 Msa1261960:CDS
GGATTAACAGCATATCTGAT+TGG 0.489401 8_2:-64437651 Msa1261960:CDS
TGTGCCTATTCCTGAGAGGC+AGG 0.490748 8_2:-64434567 Msa1261960:CDS
GAGGTCTGAGTTTAACTCTC+CGG 0.494710 8_2:+64440486 None:intergenic
TGGGTTATCTACGAACAAAT+AGG 0.494743 8_2:+64438487 None:intergenic
GATATGTGACAACTATATAC+TGG 0.495633 8_2:-64437770 Msa1261960:CDS
CTCTTGGTGCCAGAAGTAAC+CGG 0.497763 8_2:-64440505 Msa1261960:CDS
ATCACTACTTTGACAACAGT+TGG 0.498381 8_2:-64437744 Msa1261960:CDS
GATAAGGTTTACTTATTCAA+GGG 0.504358 8_2:-64437306 Msa1261960:CDS
CAATATTATCTGTAACAGAA+AGG 0.504476 8_2:+64438573 None:intergenic
TTTACTTCTGTTAGATTATG+GGG 0.504997 8_2:-64436243 Msa1261960:CDS
ATTTGCATCCGGTGAATGAA+AGG 0.506377 8_2:-64437713 Msa1261960:CDS
TTCATGGAAATGATGGTTCG+TGG 0.507610 8_2:-64434475 Msa1261960:CDS
GTTCTAACTGTAAAATGTTG+TGG 0.508227 8_2:+64436764 None:intergenic
ATGTGAAATGCTTGATCTGA+TGG 0.508712 8_2:+64437350 None:intergenic
ACAATTAGTTGTCCTGAAAA+GGG 0.509385 8_2:-64434293 Msa1261960:CDS
CATGTTAGCTCGCGGTAGGA+TGG 0.511666 8_2:-64436505 Msa1261960:CDS
AGGACAACTAATTGTTACTC+TGG 0.511991 8_2:+64434301 None:intergenic
CCATAGGTTTGCATAGGAGC+AGG 0.516008 8_2:+64438377 None:intergenic
GATCCAGCAAAGACATGGAT+TGG 0.516138 8_2:-64437834 Msa1261960:CDS
ACCTTGCAAATTGGTGATGT+TGG 0.517772 8_2:-64434890 Msa1261960:CDS
AGAGGCAGGATAGTAAAGTA+AGG 0.520908 8_2:-64434553 Msa1261960:CDS
ATGAATAACAATGCAAGGAA+TGG 0.521783 8_2:-64434347 Msa1261960:CDS
CCATGAAATGGTCCATCTTG+AGG 0.523554 8_2:+64434491 None:intergenic
AAGATAACATCTTCTTTAGG+TGG 0.523564 8_2:+64437124 None:intergenic
GTCCAGGTAAGCCACAAAGA+AGG 0.528851 8_2:+64438517 None:intergenic
GAACTTGAATTATCAAGAGA+TGG 0.529174 8_2:-64440563 Msa1261960:CDS
TCTTTAGGTGGAAAATACTC+CGG 0.530265 8_2:+64437136 None:intergenic
AGTCACTATAGTCTCACAAC+CGG 0.534124 8_2:-64440539 Msa1261960:CDS
TTGCAAGACATTATGCGATA+CGG 0.534785 8_2:-64434824 Msa1261960:CDS
AAGTTATTATTCTTACGCCT+TGG 0.534957 8_2:+64434440 None:intergenic
ATTTGGTATAGTTGCTACAA+AGG 0.535494 8_2:-64434201 Msa1261960:CDS
TTCTAGTTCGACTTGTGCCA+TGG 0.537239 8_2:+64437607 None:intergenic
ACCAAGAGAAGGTAATATTC+CGG 0.537473 8_2:+64440520 None:intergenic
CTTTGAGCCTAGGCTTGAGA+AGG 0.537587 8_2:-64438062 Msa1261960:CDS
CAGCATATAGCAGCATGTAA+AGG 0.539958 8_2:-64436281 Msa1261960:CDS
TGGTTATGGAGATTTGCATC+CGG 0.540519 8_2:-64437724 Msa1261960:CDS
CTGAAAAGGGTGAGGTTGCT+GGG 0.541290 8_2:-64434280 Msa1261960:CDS
CCTGCTCCTATGCAAACCTA+TGG 0.542911 8_2:-64438377 Msa1261960:CDS
TTCAAATGAATAACAATGCA+AGG 0.543233 8_2:-64434352 Msa1261960:CDS
GCGAAAACAGGAGAACTTTG+TGG 0.545507 8_2:-64436812 Msa1261960:CDS
AGCTGAAATTGATGATATTG+AGG 0.548119 8_2:-64434162 Msa1261960:CDS
AGCTTGAACAATATTCAAGA+AGG 0.549670 8_2:+64436703 None:intergenic
ACAAACAAGATAAATATGGT+TGG 0.551034 8_2:-64434688 Msa1261960:CDS
CATTCTAGTCACTGGTGCTG+TGG 0.554382 8_2:-64437074 Msa1261960:intron
GATAGTAAAGTAAGGTACCT+TGG 0.555336 8_2:-64434545 Msa1261960:CDS
TATCATTGGATATATGAAGC+AGG 0.556792 8_2:+64434028 None:intergenic
AATATTGTTCAAGCTAATGT+TGG 0.558746 8_2:-64436695 Msa1261960:CDS
TTTCTGTCCTTCTCAAGCCT+AGG 0.563193 8_2:+64438055 None:intergenic
AAGCATGTTGAATAGGCCAT+AGG 0.563411 8_2:+64438361 None:intergenic
ATATGTGCAACAAGCTCAGA+AGG 0.564694 8_2:+64438404 None:intergenic
AACTGTTGTCAAAGTAGTGA+TGG 0.565441 8_2:+64437746 None:intergenic
TTCCAGTAGTTGTTAGTACA+CGG 0.566069 8_2:+64440660 None:intergenic
CTGTGGGAGGCTATACTTGG+AGG 0.566130 8_2:-64434953 Msa1261960:CDS
AATGGTCCATCTTGAGGTGT+AGG 0.568937 8_2:+64434497 None:intergenic
TTACTTCTGGCACCAAGAGA+AGG 0.574678 8_2:+64440509 None:intergenic
CAATATTCAAGAAGGTGGTA+CGG 0.576345 8_2:+64436711 None:intergenic
AACAAGCTCAGAAGGAATGA+TGG 0.576388 8_2:+64438412 None:intergenic
ACGCTTCCAAATAACAGCGT+TGG 0.581242 8_2:-64434791 Msa1261960:CDS
TTTGCATCCGGTGAATGAAA+GGG 0.582391 8_2:-64437712 Msa1261960:CDS
AATAGGCCATAGGTTTGCAT+AGG 0.582725 8_2:+64438371 None:intergenic
GTTCAAGCTAATGTTGGTGA+CGG 0.585004 8_2:-64436689 Msa1261960:CDS
ATTTCCTTCAGCAGTCCTTG+TGG 0.585108 8_2:-64437797 Msa1261960:CDS
ATATTATACAAACCTGAAGA+AGG 0.585498 8_2:+64436648 None:intergenic
ACCAACATCACCAATTTGCA+AGG 0.590523 8_2:+64434889 None:intergenic
CAGGACTTGGTAGTTCTCAA+AGG 0.591073 8_2:-64436949 Msa1261960:CDS
AAAGGTATCTGAGATGAAGC+CGG 0.592222 8_2:-64437155 Msa1261960:intron
ATGACTAACTTAGTTGTCCA+TGG 0.595240 8_2:-64437624 Msa1261960:CDS
AAATAACAGCGTTGGAACCA+CGG 0.598946 8_2:-64434783 Msa1261960:CDS
ACAATGCCTACACCTCAAGA+TGG 0.600887 8_2:-64434503 Msa1261960:CDS
GATATTGAGGTTATTAGAGA+TGG 0.601302 8_2:-64434149 Msa1261960:CDS
ATATTATCTGTAACAGAAAG+GGG 0.602322 8_2:+64438575 None:intergenic
TATGGATTGACACCATTAGA+GGG 0.602501 8_2:+64434071 None:intergenic
TAGTTGTCCTGAAAAGGGTG+AGG 0.602708 8_2:-64434288 Msa1261960:CDS
CTTGGTAGTTCTCAAAGGCG+GGG 0.603468 8_2:-64436944 Msa1261960:CDS
TTGTCCACAAGGACTGCTGA+AGG 0.603513 8_2:+64437793 None:intergenic
GTCAAATTCCTATTAGAACA+TGG 0.604229 8_2:-64434722 Msa1261960:CDS
TTTGAAGTTTAGAACAGACT+CGG 0.605753 8_2:-64437415 Msa1261960:CDS
TTGATTTCAGATTGTCGGTG+AGG 0.610033 8_2:-64436834 Msa1261960:intron
ATGAATCTGACAATAATGGA+AGG 0.612082 8_2:-64436398 Msa1261960:CDS
TTGAACAATATTCAAGAAGG+TGG 0.612304 8_2:+64436706 None:intergenic
ATCATGATCCAGCAAAGACA+TGG 0.613607 8_2:-64437839 Msa1261960:CDS
ATAAGGTTTACTTATTCAAG+GGG 0.618805 8_2:-64437305 Msa1261960:CDS
GCTGAACGATCCAATTATGG+AGG 0.619540 8_2:-64436550 Msa1261960:CDS
TGATGGAAATGTAGCACTGT+GGG 0.620949 8_2:-64434969 Msa1261960:CDS
AGAACATGTTAGCTCGCGGT+AGG 0.621813 8_2:-64436509 Msa1261960:CDS
ATAATGTCAGCGGCAACCAA+AGG 0.622201 8_2:-64434398 Msa1261960:CDS
AACGATTAAGTCAACTGTTG+AGG 0.627952 8_2:-64436739 Msa1261960:CDS
GACTGCCACGTGTAACGCCG+TGG 0.630842 8_2:+64434766 None:intergenic
TGGAACCACGGCGTTACACG+TGG 0.632497 8_2:-64434771 Msa1261960:CDS
AGCATTTGATCTTGTAGACG+AGG 0.634274 8_2:+64437450 None:intergenic
AAGTTTAGAACAGACTCGGA+GGG 0.635693 8_2:-64437411 Msa1261960:CDS
TTTCTGTGCCTATTCCTGAG+AGG 0.644101 8_2:-64434571 Msa1261960:CDS
GTTCACTTGTAAATCTACCA+AGG 0.647208 8_2:+64434528 None:intergenic
CTGAACGATCCAATTATGGA+GGG 0.648177 8_2:-64436549 Msa1261960:CDS
GACTTGGTAGTTCTCAAAGG+CGG 0.651153 8_2:-64436946 Msa1261960:CDS
TGCTGGATCATGATAACGCG+CGG 0.652027 8_2:+64437848 None:intergenic
ATTTGATCTTGTAGACGAGG+AGG 0.661387 8_2:+64437453 None:intergenic
TCATAAGGAGATATAATGAG+AGG 0.668306 8_2:+64440467 None:intergenic
CAAGACATTATGCGATACGG+TGG 0.671228 8_2:-64434821 Msa1261960:CDS
CGTGGATCCAAAATCGACCA+AGG 0.677430 8_2:-64434457 Msa1261960:CDS
TTACAACAATTGTTAAAACG+AGG 0.677794 8_2:-64436432 Msa1261960:CDS
AGAGATTTAGCTGACCAACA+AGG 0.679515 8_2:-64434659 Msa1261960:CDS
ACTCTTCGGGATAATGTCAG+CGG 0.680608 8_2:-64434408 Msa1261960:CDS
TATACACAACCAATGTAACA+AGG 0.681551 8_2:+64438648 None:intergenic
GAAGTTTAGAACAGACTCGG+AGG 0.683148 8_2:-64437412 Msa1261960:CDS
TGTCACATATCTTGTCCACA+AGG 0.685180 8_2:+64437782 None:intergenic
TGGAAATGTAGCACTGTGGG+AGG 0.700302 8_2:-64434966 Msa1261960:CDS
GTGCTTCCAATGACTATGTG+TGG 0.703839 8_2:-64440593 Msa1261960:CDS
TAAGGTTTACTTATTCAAGG+GGG 0.707372 8_2:-64437304 Msa1261960:CDS
ACAGAGAACATGTTAGCTCG+CGG 0.707706 8_2:-64436513 Msa1261960:CDS
CTGATGGAAATGTAGCACTG+TGG 0.749084 8_2:-64434970 Msa1261960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATAAATATT+TGG - chr8_2:64438760-64438779 Msa1261960:intron 0.0%
!! TAAAAAAATCTTATATTCAA+CGG + chr8_2:64435383-64435402 None:intergenic 10.0%
!!! GTTAAATAATTTAAACTTTT+TGG - chr8_2:64435933-64435952 Msa1261960:intron 10.0%
!! ACTATTTAATTAATTATTCT+TGG - chr8_2:64438464-64438483 Msa1261960:CDS 10.0%
!!! TTTACTTTTTCAAATAATTT+TGG - chr8_2:64438509-64438528 Msa1261960:CDS 10.0%
!! TAATAATAATATACAATACA+TGG - chr8_2:64438582-64438601 Msa1261960:CDS 10.0%
!!! ACCAATAATTTTATAATAAA+GGG + chr8_2:64439247-64439266 None:intergenic 10.0%
!!! TATATTATAGTTTTTTTCTA+AGG + chr8_2:64439516-64439535 None:intergenic 10.0%
!!! AAAATAAAATAAGTTGATTA+TGG - chr8_2:64439618-64439637 Msa1261960:intron 10.0%
!!! TTTTTTTCTGTTTTAGTATA+AGG + chr8_2:64434896-64434915 None:intergenic 15.0%
!!! AACAAACACAATTTTTAAAT+GGG + chr8_2:64435024-64435043 None:intergenic 15.0%
!!! AAACAAACACAATTTTTAAA+TGG + chr8_2:64435025-64435044 None:intergenic 15.0%
!!! TTTATTTTTTTACTCTTCAA+AGG - chr8_2:64435057-64435076 Msa1261960:intron 15.0%
!! AAAAAAATCTTATATTCAAC+GGG + chr8_2:64435382-64435401 None:intergenic 15.0%
!!! GTTGAATATAAGATTTTTTT+AGG - chr8_2:64435382-64435401 Msa1261960:intron 15.0%
!! TGTACAATATTCAATTAAAT+TGG + chr8_2:64435710-64435729 None:intergenic 15.0%
!!! TTATTTTTAAATATTGATCG+TGG - chr8_2:64435737-64435756 Msa1261960:intron 15.0%
!! TAGATTTCAAATTAGTAATT+TGG + chr8_2:64437587-64437606 None:intergenic 15.0%
!! AAAGTAAATGAATAAGAATA+TGG + chr8_2:64438497-64438516 None:intergenic 15.0%
!!! ATTTTAAAAAATTCTTTCTG+TGG - chr8_2:64438924-64438943 Msa1261960:intron 15.0%
!! AACTAAATAAACTTACAAAA+TGG - chr8_2:64438985-64439004 Msa1261960:intron 15.0%
!! TTAATAATTCATAAGTTCAT+TGG + chr8_2:64439024-64439043 None:intergenic 15.0%
!! ACTTATGAATTATTAATCTT+TGG - chr8_2:64439028-64439047 Msa1261960:intron 15.0%
!! TAGATAAACAAAATAATACA+AGG + chr8_2:64439063-64439082 None:intergenic 15.0%
!! TCCCTTTATTATAAAATTAT+TGG - chr8_2:64439243-64439262 Msa1261960:intron 15.0%
!!! GACCAATAATTTTATAATAA+AGG + chr8_2:64439248-64439267 None:intergenic 15.0%
!! AAGTTACTAGAACATAAAAA+TGG - chr8_2:64434013-64434032 Msa1261960:three_prime_UTR 20.0%
!!! TTTTTAAGAAACACAATGAA+TGG - chr8_2:64434386-64434405 Msa1261960:CDS 20.0%
!! GAAAAAATAATGTGAAATAC+TGG + chr8_2:64434463-64434482 None:intergenic 20.0%
!!! TTTATTGAATTTTTTCTTCC+TGG - chr8_2:64434626-64434645 Msa1261960:CDS 20.0%
!! TATTCTCTTGAAAATACTTA+TGG - chr8_2:64434795-64434814 Msa1261960:CDS 20.0%
!! CTAAAACAGAAAAAAAAATC+TGG - chr8_2:64434900-64434919 Msa1261960:CDS 20.0%
!! AAAACAAAGTCAAACTTTAT+AGG + chr8_2:64435117-64435136 None:intergenic 20.0%
!!! TGAGTTTTGTCATTATTTAT+AGG + chr8_2:64435410-64435429 None:intergenic 20.0%
!! TAAAACATCCTTAAATCATT+AGG + chr8_2:64435437-64435456 None:intergenic 20.0%
!!! TGCTTTTAATTCAATGTAAT+CGG - chr8_2:64435492-64435511 Msa1261960:intron 20.0%
!! AATATTATCTGTAACAGAAA+GGG + chr8_2:64436057-64436076 None:intergenic 20.0%
!!! ACAGAAACTATAACTATTTT+TGG - chr8_2:64436589-64436608 Msa1261960:intron 20.0%
!!! CAGAAACTATAACTATTTTT+GGG - chr8_2:64436590-64436609 Msa1261960:intron 20.0%
!! AATTTATCTTCCTTCTTAAA+AGG + chr8_2:64436668-64436687 None:intergenic 20.0%
!! TAAATTAGATGTAAATGAGA+TGG - chr8_2:64436682-64436701 Msa1261960:CDS 20.0%
!! TAACTAACAATAACAAGTTA+GGG + chr8_2:64437393-64437412 None:intergenic 20.0%
!!! ACTAATTTGAAATCTAAATG+CGG - chr8_2:64437591-64437610 Msa1261960:intron 20.0%
!!! ATATAAACTGAAGTTTTTTG+TGG - chr8_2:64437636-64437655 Msa1261960:CDS 20.0%
!! TTCTAATAAATCTATTTGAC+AGG - chr8_2:64437660-64437679 Msa1261960:CDS 20.0%
!! TATGAACTAAATCTAAACAT+TGG - chr8_2:64437768-64437787 Msa1261960:CDS 20.0%
!!! TTTTACTTCTGTTAGATTAT+GGG - chr8_2:64438384-64438403 Msa1261960:CDS 20.0%
!! ATGAATAAGAATATGGATAA+AGG + chr8_2:64438490-64438509 None:intergenic 20.0%
!! ACATCAGCATAAAAATAATA+AGG + chr8_2:64438786-64438805 None:intergenic 20.0%
!! AAGTCAACTAAGAAAATAAA+TGG + chr8_2:64438818-64438837 None:intergenic 20.0%
!!! TTTAGTAATTTTTGTGATGT+TGG - chr8_2:64439389-64439408 Msa1261960:intron 20.0%
!!! TTAGTAATTTTTGTGATGTT+GGG - chr8_2:64439390-64439409 Msa1261960:intron 20.0%
!!! TATAAACATTTCTTTTCATG+AGG - chr8_2:64439532-64439551 Msa1261960:intron 20.0%
!! ATTGACAAACAAGATAAATA+TGG - chr8_2:64439936-64439955 Msa1261960:intron 20.0%
!! TCAAATATGTCAATTATCAT+TGG + chr8_2:64440617-64440636 None:intergenic 20.0%
! GGAAAAAAAAGATTCATACA+AGG - chr8_2:64433987-64434006 Msa1261960:three_prime_UTR 25.0%
!! TTGATAATTCAAGTTCTTCT+TGG + chr8_2:64434061-64434080 None:intergenic 25.0%
! AGAAAGAAGAAAACAATCAA+CGG + chr8_2:64434351-64434370 None:intergenic 25.0%
! CAAAGAATAGAATAAAAGAG+AGG + chr8_2:64434653-64434672 None:intergenic 25.0%
! TCATTAAGAAGAGATATTGT+TGG + chr8_2:64434867-64434886 None:intergenic 25.0%
!!! TTTTCTGTTTTAGTATAAGG+CGG + chr8_2:64434893-64434912 None:intergenic 25.0%
!!! ACACAATTTTTAAATGGGTT+GGG + chr8_2:64435019-64435038 None:intergenic 25.0%
!! AACACAATTTTTAAATGGGT+TGG + chr8_2:64435020-64435039 None:intergenic 25.0%
! TAACGAAAGAAATTTGATGT+TGG - chr8_2:64435196-64435215 Msa1261960:intron 25.0%
! GTTCAATAAGATGAGAAATA+GGG + chr8_2:64435871-64435890 None:intergenic 25.0%
! TGTTCAATAAGATGAGAAAT+AGG + chr8_2:64435872-64435891 None:intergenic 25.0%
! TTAAGGAATCCAAATTCAAA+TGG + chr8_2:64436020-64436039 None:intergenic 25.0%
! ATATTATCTGTAACAGAAAG+GGG + chr8_2:64436056-64436075 None:intergenic 25.0%
! CAATATTATCTGTAACAGAA+AGG + chr8_2:64436058-64436077 None:intergenic 25.0%
! GTTACAGATAATATTGTCAA+TGG - chr8_2:64436062-64436081 Msa1261960:intron 25.0%
!!! ACTATAACTATTTTTGGGTT+CGG - chr8_2:64436595-64436614 Msa1261960:intron 25.0%
!! ATAATCTGAATGATTTTCAC+AGG - chr8_2:64436709-64436728 Msa1261960:CDS 25.0%
!! TTTTACATGCTCTTTAATCT+AGG - chr8_2:64436956-64436975 Msa1261960:intron 25.0%
!! TTATCTTTTCTATTCTCTGA+TGG - chr8_2:64437300-64437319 Msa1261960:CDS 25.0%
! GATAAGGTTTACTTATTCAA+GGG - chr8_2:64437322-64437341 Msa1261960:CDS 25.0%
! ATAAGGTTTACTTATTCAAG+GGG - chr8_2:64437323-64437342 Msa1261960:CDS 25.0%
!!! AAATGATTTGCTCTTTCAAT+TGG - chr8_2:64437351-64437370 Msa1261960:CDS 25.0%
! GTAACTAACAATAACAAGTT+AGG + chr8_2:64437394-64437413 None:intergenic 25.0%
! TGTAAGATAACATCTTCTTT+AGG + chr8_2:64437510-64437529 None:intergenic 25.0%
! ACTAGAATGTAAAAATCAGT+TGG + chr8_2:64437543-64437562 None:intergenic 25.0%
! TTTACAACTTAATGCATGAT+AGG - chr8_2:64437724-64437743 Msa1261960:CDS 25.0%
! AATATTGTTCAAGCTAATGT+TGG - chr8_2:64437933-64437952 Msa1261960:intron 25.0%
! AAGAAGGTTATTCATGATTA+TGG + chr8_2:64437967-64437986 None:intergenic 25.0%
! ATATTATACAAACCTGAAGA+AGG + chr8_2:64437983-64438002 None:intergenic 25.0%
! TGTTGACATGTTTATGTATT+TGG - chr8_2:64438020-64438039 Msa1261960:CDS 25.0%
! TTACAACAATTGTTAAAACG+AGG - chr8_2:64438196-64438215 Msa1261960:intron 25.0%
!! GTTTTACTTCTGTTAGATTA+TGG - chr8_2:64438383-64438402 Msa1261960:CDS 25.0%
! TTTACTTCTGTTAGATTATG+GGG - chr8_2:64438385-64438404 Msa1261960:CDS 25.0%
!! ATTATTGCCAAGTCATATTT+TGG - chr8_2:64438654-64438673 Msa1261960:CDS 25.0%
!! TGACTTATCTTTTCCATATT+AGG - chr8_2:64438832-64438851 Msa1261960:intron 25.0%
! TCATTAAATTCAACGTGTAT+TGG + chr8_2:64439119-64439138 None:intergenic 25.0%
! AATGTTATACTAACAAGAGA+TGG - chr8_2:64439301-64439320 Msa1261960:intron 25.0%
!! AGAATTTTATAGGGAAAAAG+AGG + chr8_2:64439359-64439378 None:intergenic 25.0%
! TATCAAATTACTACTTCATC+AGG + chr8_2:64439593-64439612 None:intergenic 25.0%
!! TGAATCAGTAACAAAACTTT+TGG - chr8_2:64439701-64439720 Msa1261960:intron 25.0%
! ACAAACAAGATAAATATGGT+TGG - chr8_2:64439940-64439959 Msa1261960:intron 25.0%
! AACTTTCATAATTCACTCTT+CGG - chr8_2:64440206-64440225 Msa1261960:intron 25.0%
! TCATTTGAACACTGAAAAAT+TGG + chr8_2:64440265-64440284 None:intergenic 25.0%
! TTCAAATGAATAACAATGCA+AGG - chr8_2:64440276-64440295 Msa1261960:intron 25.0%
! TTTCAAGAGTTACTTGAAAT+TGG - chr8_2:64440395-64440414 Msa1261960:intron 25.0%
! GAAATTGGATCTAAGAAATT+TGG - chr8_2:64440410-64440429 Msa1261960:intron 25.0%
! ATTATCGTAAGTACACATTA+TGG + chr8_2:64440578-64440597 None:intergenic 25.0%
GAACTTGAATTATCAAGAGA+TGG - chr8_2:64434065-64434084 Msa1261960:exon 30.0%
TCATAAGGAGATATAATGAG+AGG + chr8_2:64434164-64434183 None:intergenic 30.0%
ATAAACAGAGAAGGAATTAC+CGG + chr8_2:64434196-64434215 None:intergenic 30.0%
GAAAAAAGGATAAACAGAGA+AGG + chr8_2:64434205-64434224 None:intergenic 30.0%
!!! TATCCTTTTTTCAACGTTCT+TGG - chr8_2:64434213-64434232 Msa1261960:CDS 30.0%
TTACCAAGAACGTTGAAAAA+AGG + chr8_2:64434219-64434238 None:intergenic 30.0%
GAAAGAAGAAAACAATCAAC+GGG + chr8_2:64434350-64434369 None:intergenic 30.0%
TGAAGATGGAATTTCTTGAA+TGG + chr8_2:64434679-64434698 None:intergenic 30.0%
TTCAAGAAATTCCATCTTCA+CGG - chr8_2:64434679-64434698 Msa1261960:CDS 30.0%
!!! TTTCTGTTTTAGTATAAGGC+GGG + chr8_2:64434892-64434911 None:intergenic 30.0%
! AGAAACACGTGTAAACTTTT+TGG + chr8_2:64435088-64435107 None:intergenic 30.0%
!!! TGACTTTGTTTTCCTTGTAT+AGG - chr8_2:64435125-64435144 Msa1261960:intron 30.0%
AGAAACAAAACGGGTAATTT+AGG + chr8_2:64435238-64435257 None:intergenic 30.0%
!!! AAATTACCCGTTTTGTTTCT+TGG - chr8_2:64435238-64435257 Msa1261960:intron 30.0%
TACATAGCCAAGAAACAAAA+CGG + chr8_2:64435248-64435267 None:intergenic 30.0%
! CATGTCAATTTGTTTAACTG+CGG - chr8_2:64435326-64435345 Msa1261960:intron 30.0%
CTCATACACCTAATGATTTA+AGG - chr8_2:64435426-64435445 Msa1261960:intron 30.0%
TTTAAATATTGATCGTGGAG+CGG - chr8_2:64435742-64435761 Msa1261960:intron 30.0%
!! TTAAACTTTTTGGCATTTGC+AGG - chr8_2:64435943-64435962 Msa1261960:intron 30.0%
TATACACAACCAATGTAACA+AGG + chr8_2:64435983-64436002 None:intergenic 30.0%
!! TATAGTTCTAACCTTCTTTG+TGG - chr8_2:64436100-64436119 Msa1261960:intron 30.0%
! ATTTCCAAGCAATCTGTTTT+GGG + chr8_2:64436163-64436182 None:intergenic 30.0%
! TATTTCCAAGCAATCTGTTT+TGG + chr8_2:64436164-64436183 None:intergenic 30.0%
TTTGTAGCTTCACAAAATCA+CGG - chr8_2:64436430-64436449 Msa1261960:CDS 30.0%
GATATGTGACAACTATATAC+TGG - chr8_2:64436858-64436877 Msa1261960:intron 30.0%
! TTTGAAGTTTAGAACAGACT+CGG - chr8_2:64437213-64437232 Msa1261960:intron 30.0%
! TTTCTATTCTCTGATGGATA+AGG - chr8_2:64437306-64437325 Msa1261960:CDS 30.0%
GGATAAGGTTTACTTATTCA+AGG - chr8_2:64437321-64437340 Msa1261960:CDS 30.0%
TAAGGTTTACTTATTCAAGG+GGG - chr8_2:64437324-64437343 Msa1261960:CDS 30.0%
AATAACAAGTTAGGGCTAAA+AGG + chr8_2:64437385-64437404 None:intergenic 30.0%
TTGCTCGATTCAACTATAAA+AGG - chr8_2:64437455-64437474 Msa1261960:CDS 30.0%
AAGATAACATCTTCTTTAGG+TGG + chr8_2:64437507-64437526 None:intergenic 30.0%
! GATTTTTACATTCTAGTCAC+TGG - chr8_2:64437546-64437565 Msa1261960:intron 30.0%
TAAATCTATTTGACAGGACT+TGG - chr8_2:64437666-64437685 Msa1261960:CDS 30.0%
! GGTAATTGATTTCAGATTGT+CGG - chr8_2:64437789-64437808 Msa1261960:CDS 30.0%
GTTCTAACTGTAAAATGTTG+TGG + chr8_2:64437867-64437886 None:intergenic 30.0%
TTGAACAATATTCAAGAAGG+TGG + chr8_2:64437925-64437944 None:intergenic 30.0%
AGCTTGAACAATATTCAAGA+AGG + chr8_2:64437928-64437947 None:intergenic 30.0%
AATCATGAATAACCTTCTTC+AGG - chr8_2:64437968-64437987 Msa1261960:intron 30.0%
ACAATTGTTAAAACGAGGTT+TGG - chr8_2:64438201-64438220 Msa1261960:intron 30.0%
CCATTATTGTCAGATTCATT+TGG + chr8_2:64438229-64438248 None:intergenic 30.0%
CCAAATGAATCTGACAATAA+TGG - chr8_2:64438226-64438245 Msa1261960:intron 30.0%
! ATGAATCTGACAATAATGGA+AGG - chr8_2:64438230-64438249 Msa1261960:intron 30.0%
GAATATTTACCTCTAACGTT+GGG + chr8_2:64438416-64438435 None:intergenic 30.0%
TGAATATTTACCTCTAACGT+TGG + chr8_2:64438417-64438436 None:intergenic 30.0%
!!! CTGTCTCTAAACTTCTTTTT+TGG - chr8_2:64438437-64438456 Msa1261960:CDS 30.0%
AAGAAACCAAATGCTTACTA+AGG + chr8_2:64438684-64438703 None:intergenic 30.0%
!!! GCAGAAGTAGAAGTTTTTTT+TGG + chr8_2:64438740-64438759 None:intergenic 30.0%
!! TAAGTGTTGACTTCCTAATA+TGG + chr8_2:64438848-64438867 None:intergenic 30.0%
TAATCATGTTGTACTCAATG+AGG - chr8_2:64438887-64438906 Msa1261960:intron 30.0%
! AAAAGAGGTATGAATAAGTC+TGG + chr8_2:64439344-64439363 None:intergenic 30.0%
AATTTACTTGCAGATTCTGA+TGG - chr8_2:64439642-64439661 Msa1261960:intron 30.0%
! ACAAAACTTTTGGCAGAAAA+TGG - chr8_2:64439711-64439730 Msa1261960:intron 30.0%
GTCAAATTCCTATTAGAACA+TGG - chr8_2:64439906-64439925 Msa1261960:intron 30.0%
!!! AAAGCTATTTTTGAAGCCAA+AGG - chr8_2:64440005-64440024 Msa1261960:intron 30.0%
CTTACTATTATCTTCTCCTT+TGG + chr8_2:64440024-64440043 None:intergenic 30.0%
AAGTTATTATTCTTACGCCT+TGG + chr8_2:64440191-64440210 None:intergenic 30.0%
ACTTTCATAATTCACTCTTC+GGG - chr8_2:64440207-64440226 Msa1261960:intron 30.0%
!! AAATTGGTCATTTTCTCCTT+TGG + chr8_2:64440249-64440268 None:intergenic 30.0%
ATGAATAACAATGCAAGGAA+TGG - chr8_2:64440281-64440300 Msa1261960:intron 30.0%
AACAATTAGTTGTCCTGAAA+AGG - chr8_2:64440334-64440353 Msa1261960:intron 30.0%
ACAATTAGTTGTCCTGAAAA+GGG - chr8_2:64440335-64440354 Msa1261960:intron 30.0%
AGTAACTCTTGAAAACTTTC+AGG + chr8_2:64440389-64440408 None:intergenic 30.0%
ATTTGGTATAGTTGCTACAA+AGG - chr8_2:64440427-64440446 Msa1261960:intron 30.0%
! AGCTGAAATTGATGATATTG+AGG - chr8_2:64440466-64440485 Msa1261960:CDS 30.0%
GATATTGAGGTTATTAGAGA+TGG - chr8_2:64440479-64440498 Msa1261960:CDS 30.0%
TATCATTGGATATATGAAGC+AGG + chr8_2:64440603-64440622 None:intergenic 30.0%
! TTTTGATAGGCATGTTTAGG+CGG + chr8_2:64433948-64433967 None:intergenic 35.0%
!! TGTTAGTACACGGTTTTGAT+AGG + chr8_2:64433961-64433980 None:intergenic 35.0%
TTCCAGTAGTTGTTAGTACA+CGG + chr8_2:64433971-64433990 None:intergenic 35.0%
ACCAAGAGAAGGTAATATTC+CGG + chr8_2:64434111-64434130 None:intergenic 35.0%
TTCAACCGAGTTTCAAATCT+TGG - chr8_2:64434291-64434310 Msa1261960:CDS 35.0%
! TCCAACCAAGATTTGAAACT+CGG + chr8_2:64434299-64434318 None:intergenic 35.0%
!! TTCTGTTGCTTTGTTTCTGA+CGG - chr8_2:64434534-64434553 Msa1261960:CDS 35.0%
ATAGAATAAAAGAGAGGACC+AGG + chr8_2:64434647-64434666 None:intergenic 35.0%
!!! TTCTGTTTTAGTATAAGGCG+GGG + chr8_2:64434891-64434910 None:intergenic 35.0%
! TCTTGGTTGTTTCCTATACA+AGG + chr8_2:64435140-64435159 None:intergenic 35.0%
ATAGGAAACAACCAAGAAGT+TGG - chr8_2:64435143-64435162 Msa1261960:intron 35.0%
!!! TTGGTGGTGTGTTTTAATGA+TGG - chr8_2:64435162-64435181 Msa1261960:intron 35.0%
ACATAGCCAAGAAACAAAAC+GGG + chr8_2:64435247-64435266 None:intergenic 35.0%
! AATGGAGATGATGAGCATTT+TGG - chr8_2:64435804-64435823 Msa1261960:intron 35.0%
!! TTTTTGGCATTTGCAGGATA+TGG - chr8_2:64435949-64435968 Msa1261960:intron 35.0%
! TTTTGGCATTTGCAGGATAT+GGG - chr8_2:64435950-64435969 Msa1261960:intron 35.0%
GGAAACTTTCCTTGTTACAT+TGG - chr8_2:64435971-64435990 Msa1261960:intron 35.0%
ATTGGTTGTGTATACTGCTT+GGG - chr8_2:64435989-64436008 Msa1261960:intron 35.0%
TGGGTATCTCCATTTGAATT+TGG - chr8_2:64436008-64436027 Msa1261960:intron 35.0%
!!! ACAAATAGGTAGTTTTGTCC+AGG + chr8_2:64436130-64436149 None:intergenic 35.0%
TGGGTTATCTACGAACAAAT+AGG + chr8_2:64436144-64436163 None:intergenic 35.0%
ATAACCCAAAACAGATTGCT+TGG - chr8_2:64436156-64436175 Msa1261960:intron 35.0%
CTTGGAAATATGCAAGAACT+TGG - chr8_2:64436174-64436193 Msa1261960:intron 35.0%
AAAGCCTAAGCATGTTGAAT+AGG + chr8_2:64436277-64436296 None:intergenic 35.0%
TATTCAACATGCTTAGGCTT+TGG - chr8_2:64436276-64436295 Msa1261960:CDS 35.0%
AGATTGAAACTTGACAGCTT+TGG - chr8_2:64436334-64436353 Msa1261960:intron 35.0%
!!! ATGTTGTTTTCTTTGAGCCT+AGG - chr8_2:64436556-64436575 Msa1261960:CDS 35.0%
!! GTGTTTGCAACCTTTTAAGA+AGG - chr8_2:64436655-64436674 Msa1261960:intron 35.0%
AACTGTTGTCAAAGTAGTGA+TGG + chr8_2:64436885-64436904 None:intergenic 35.0%
ATCACTACTTTGACAACAGT+TGG - chr8_2:64436884-64436903 Msa1261960:intron 35.0%
ACTTTGACAACAGTTGGTTA+TGG - chr8_2:64436890-64436909 Msa1261960:intron 35.0%
GGATTAACAGCATATCTGAT+TGG - chr8_2:64436977-64436996 Msa1261960:intron 35.0%
ATGACTAACTTAGTTGTCCA+TGG - chr8_2:64437004-64437023 Msa1261960:intron 35.0%
TTGTTTGTGACAAATCTCAG+AGG - chr8_2:64437107-64437126 Msa1261960:CDS 35.0%
TGTTTGTGACAAATCTCAGA+GGG - chr8_2:64437108-64437127 Msa1261960:CDS 35.0%
AAAACTTGATGCAGCTTGTA+TGG + chr8_2:64437137-64437156 None:intergenic 35.0%
ATGTGAAATGCTTGATCTGA+TGG + chr8_2:64437281-64437300 None:intergenic 35.0%
TCTTTAGGTGGAAAATACTC+CGG + chr8_2:64437495-64437514 None:intergenic 35.0%
! CAACAGTTGACTTAATCGTT+TGG + chr8_2:64437889-64437908 None:intergenic 35.0%
AACGATTAAGTCAACTGTTG+AGG - chr8_2:64437889-64437908 Msa1261960:CDS 35.0%
AGGACTTCCAAAATATGACT+TGG + chr8_2:64438664-64438683 None:intergenic 35.0%
GTTTATCTAGACTATACCAC+CGG - chr8_2:64439074-64439093 Msa1261960:intron 35.0%
TTGGTAAATGCCACTACTAA+AGG + chr8_2:64439100-64439119 None:intergenic 35.0%
TTGCAAGACATTATGCGATA+CGG - chr8_2:64439804-64439823 Msa1261960:intron 35.0%
GACAATTTCAACACTGTCTT+CGG + chr8_2:64439889-64439908 None:intergenic 35.0%
TGTTAGCACCATGTTCTAAT+AGG + chr8_2:64439917-64439936 None:intergenic 35.0%
TGATTTCTGTATGTCCTTGT+TGG + chr8_2:64439986-64440005 None:intergenic 35.0%
! GATAGTAAAGTAAGGTACCT+TGG - chr8_2:64440083-64440102 Msa1261960:intron 35.0%
GTTCACTTGTAAATCTACCA+AGG + chr8_2:64440103-64440122 None:intergenic 35.0%
GAACCATCATTTCCATGAAA+TGG + chr8_2:64440152-64440171 None:intergenic 35.0%
CAACTAATTGTTACTCTGGT+TGG + chr8_2:64440326-64440345 None:intergenic 35.0%
AGGACAACTAATTGTTACTC+TGG + chr8_2:64440330-64440349 None:intergenic 35.0%
ACAAAGGTTGTTTGCAAAGA+TGG - chr8_2:64440443-64440462 Msa1261960:intron 35.0%
!!! GGTGATCATCTTGTTTTTGT+TGG - chr8_2:64440500-64440519 Msa1261960:CDS 35.0%
!!! CATCTTGTTTTTGTTGGTAC+TGG - chr8_2:64440506-64440525 Msa1261960:CDS 35.0%
!!! TTGTTTTTGTTGGTACTGGT+GGG - chr8_2:64440510-64440529 Msa1261960:CDS 35.0%
!! ATTAGAGGGTGTTGTACAAT+TGG + chr8_2:64440546-64440565 None:intergenic 35.0%
AATTGTACAACACCCTCTAA+TGG - chr8_2:64440545-64440564 Msa1261960:CDS 35.0%
! TATGGATTGACACCATTAGA+GGG + chr8_2:64440560-64440579 None:intergenic 35.0%
! TTATGGATTGACACCATTAG+AGG + chr8_2:64440561-64440580 None:intergenic 35.0%
!! CGGTTTTGATAGGCATGTTT+AGG + chr8_2:64433951-64433970 None:intergenic 40.0%
AACCGTGTACTAACAACTAC+TGG - chr8_2:64433966-64433985 Msa1261960:three_prime_UTR 40.0%
AGTCACTATAGTCTCACAAC+CGG - chr8_2:64434089-64434108 Msa1261960:CDS 40.0%
ACCGGAATATTACCTTCTCT+TGG - chr8_2:64434107-64434126 Msa1261960:CDS 40.0%
TTTAACTCTCCGGTTACTTC+TGG + chr8_2:64434135-64434154 None:intergenic 40.0%
ACCGAGTTTCAAATCTTGGT+TGG - chr8_2:64434295-64434314 Msa1261960:CDS 40.0%
GAGTTTCAAATCTTGGTTGG+AGG - chr8_2:64434298-64434317 Msa1261960:CDS 40.0%
TCTCAACTCTGTCACAAGAA+AGG + chr8_2:64434498-64434517 None:intergenic 40.0%
ATGTGAGAATTCCGTGAAGA+TGG + chr8_2:64434693-64434712 None:intergenic 40.0%
TCACGGAATTCTCACATAGA+AGG - chr8_2:64434696-64434715 Msa1261960:CDS 40.0%
AAAACACACCACCAACTTCT+TGG + chr8_2:64435157-64435176 None:intergenic 40.0%
TTGTTTAACTGCGGTTTGTG+AGG - chr8_2:64435335-64435354 Msa1261960:intron 40.0%
TGTTTAACTGCGGTTTGTGA+GGG - chr8_2:64435336-64435355 Msa1261960:intron 40.0%
! GAGATGATGAGCATTTTGGA+TGG - chr8_2:64435808-64435827 Msa1261960:intron 40.0%
! ATGATGAGCATTTTGGATGG+CGG - chr8_2:64435811-64435830 Msa1261960:intron 40.0%
AAATAGGGATGCCAATGAGA+CGG + chr8_2:64435856-64435875 None:intergenic 40.0%
! CATTGGTTGTGTATACTGCT+TGG - chr8_2:64435988-64436007 Msa1261960:intron 40.0%
! GGGGTTTTTGTGGTTTCTTA+AGG + chr8_2:64436037-64436056 None:intergenic 40.0%
! GTAACAGAAAGGGGTTTTTG+TGG + chr8_2:64436047-64436066 None:intergenic 40.0%
AACAAGCTCAGAAGGAATGA+TGG + chr8_2:64436219-64436238 None:intergenic 40.0%
ATATGTGCAACAAGCTCAGA+AGG + chr8_2:64436227-64436246 None:intergenic 40.0%
AATAGGCCATAGGTTTGCAT+AGG + chr8_2:64436260-64436279 None:intergenic 40.0%
AAGCATGTTGAATAGGCCAT+AGG + chr8_2:64436270-64436289 None:intergenic 40.0%
ATGGCCTATTCAACATGCTT+AGG - chr8_2:64436270-64436289 Msa1261960:CDS 40.0%
! TTTTGCGGAAAACTTGTGAG+TGG + chr8_2:64436403-64436422 None:intergenic 40.0%
! GCTACAAAGTGTAGCTTTTG+CGG + chr8_2:64436418-64436437 None:intergenic 40.0%
ATCATGATCCAGCAAAGACA+TGG - chr8_2:64436789-64436808 Msa1261960:CDS 40.0%
TGTCACATATCTTGTCCACA+AGG + chr8_2:64436849-64436868 None:intergenic 40.0%
TGGTTATGGAGATTTGCATC+CGG - chr8_2:64436904-64436923 Msa1261960:intron 40.0%
ATTTGCATCCGGTGAATGAA+AGG - chr8_2:64436915-64436934 Msa1261960:intron 40.0%
TTTGCATCCGGTGAATGAAA+GGG - chr8_2:64436916-64436935 Msa1261960:intron 40.0%
ATCATCTCCCTTTCATTCAC+CGG + chr8_2:64436926-64436945 None:intergenic 40.0%
! CTGCATCAAGTTTTGCTCAT+AGG - chr8_2:64437143-64437162 Msa1261960:CDS 40.0%
ATTTGATCTTGTAGACGAGG+AGG + chr8_2:64437178-64437197 None:intergenic 40.0%
AGCATTTGATCTTGTAGACG+AGG + chr8_2:64437181-64437200 None:intergenic 40.0%
! AAGTTTAGAACAGACTCGGA+GGG - chr8_2:64437217-64437236 Msa1261960:intron 40.0%
ATGCTTGATCTGATGGCTTT+AGG + chr8_2:64437274-64437293 None:intergenic 40.0%
!! AAAGGTATCTGAGATGAAGC+CGG - chr8_2:64437473-64437492 Msa1261960:CDS 40.0%
TTGATTTCAGATTGTCGGTG+AGG - chr8_2:64437794-64437813 Msa1261960:CDS 40.0%
! GTTCAAGCTAATGTTGGTGA+CGG - chr8_2:64437939-64437958 Msa1261960:intron 40.0%
AGAGCTGAACGATCCAATTA+TGG - chr8_2:64438075-64438094 Msa1261960:CDS 40.0%
CTGAACGATCCAATTATGGA+GGG - chr8_2:64438079-64438098 Msa1261960:CDS 40.0%
! TCCAATTATGGAGGGAGTTT+TGG - chr8_2:64438087-64438106 Msa1261960:CDS 40.0%
ACCAAAACTCCCTCCATAAT+TGG + chr8_2:64438091-64438110 None:intergenic 40.0%
! CAATAATGGAAGGACAGCTT+TGG - chr8_2:64438240-64438259 Msa1261960:intron 40.0%
CAGCATATAGCAGCATGTAA+AGG - chr8_2:64438347-64438366 Msa1261960:CDS 40.0%
GGAAGTCCTTAGTAAGCATT+TGG - chr8_2:64438675-64438694 Msa1261960:intron 40.0%
TGTACTCAATGAGGAAGCAA+AGG - chr8_2:64438896-64438915 Msa1261960:intron 40.0%
TAAATGCCACTACTAAAGGC+CGG + chr8_2:64439096-64439115 None:intergenic 40.0%
ACTAACAAGAGATGGTCATG+TGG - chr8_2:64439309-64439328 Msa1261960:intron 40.0%
CTAAGGCAACACTAGTACAT+GGG + chr8_2:64439499-64439518 None:intergenic 40.0%
! TCTAAGGCAACACTAGTACA+TGG + chr8_2:64439500-64439519 None:intergenic 40.0%
ACTACTTCATCAGGCATAGA+AGG + chr8_2:64439584-64439603 None:intergenic 40.0%
TGATGGAAATGTAGCACTGT+GGG - chr8_2:64439659-64439678 Msa1261960:intron 40.0%
!! AATGGTGCTACCTTGCAAAT+TGG - chr8_2:64439729-64439748 Msa1261960:intron 40.0%
!! ACCTTGCAAATTGGTGATGT+TGG - chr8_2:64439738-64439757 Msa1261960:intron 40.0%
ACCAACATCACCAATTTGCA+AGG + chr8_2:64439742-64439761 None:intergenic 40.0%
! AAATAACAGCGTTGGAACCA+CGG - chr8_2:64439845-64439864 Msa1261960:intron 40.0%
TGTTGGTCAGCTAAATCTCT+TGG + chr8_2:64439969-64439988 None:intergenic 40.0%
AGAGATTTAGCTGACCAACA+AGG - chr8_2:64439969-64439988 Msa1261960:intron 40.0%
AGAGGCAGGATAGTAAAGTA+AGG - chr8_2:64440075-64440094 Msa1261960:intron 40.0%
GGACCATTTCATGGAAATGA+TGG - chr8_2:64440146-64440165 Msa1261960:intron 40.0%
TTCATGGAAATGATGGTTCG+TGG - chr8_2:64440153-64440172 Msa1261960:intron 40.0%
!!! CTTGTTTTTGTTGGTACTGG+TGG - chr8_2:64440509-64440528 Msa1261960:CDS 40.0%
!!! TGTTTTTGTTGGTACTGGTG+GGG - chr8_2:64440511-64440530 Msa1261960:CDS 40.0%
GTGCTTCCAATGACTATGTG+TGG - chr8_2:64434035-64434054 Msa1261960:three_prime_UTR 45.0%
TCTTGGCCACACATAGTCAT+TGG + chr8_2:64434044-64434063 None:intergenic 45.0%
TTACTTCTGGCACCAAGAGA+AGG + chr8_2:64434122-64434141 None:intergenic 45.0%
GAGGTCTGAGTTTAACTCTC+CGG + chr8_2:64434145-64434164 None:intergenic 45.0%
CTCCTTATGATCGTCGTTAC+CGG - chr8_2:64434174-64434193 Msa1261960:CDS 45.0%
TACCGGTAACGACGATCATA+AGG + chr8_2:64434179-64434198 None:intergenic 45.0%
GAAAACAATCAACGGGCGTT+GGG + chr8_2:64434343-64434362 None:intergenic 45.0%
AGAAAACAATCAACGGGCGT+TGG + chr8_2:64434344-64434363 None:intergenic 45.0%
GGAAACAACCAAGAAGTTGG+TGG - chr8_2:64435146-64435165 Msa1261960:intron 45.0%
TTTCCCTCATCCAATTCGTG+CGG + chr8_2:64435593-64435612 None:intergenic 45.0%
AAAAGTCCCACAAGCTGGTT+TGG - chr8_2:64435610-64435629 Msa1261960:intron 45.0%
AAACCACCAAACCAGCTTGT+GGG + chr8_2:64435619-64435638 None:intergenic 45.0%
!! ACAAGCTGGTTTGGTGGTTT+GGG - chr8_2:64435619-64435638 Msa1261960:intron 45.0%
! TGATGAGCATTTTGGATGGC+GGG - chr8_2:64435812-64435831 Msa1261960:intron 45.0%
AATAGGGATGCCAATGAGAC+GGG + chr8_2:64435855-64435874 None:intergenic 45.0%
AACCTTCTTTGTGGCTTACC+TGG - chr8_2:64436109-64436128 Msa1261960:intron 45.0%
! GAGTCAGCGCTATGTTTTCT+CGG - chr8_2:64436309-64436328 Msa1261960:intron 45.0%
! TGACAGCTTTGGTGCATGTT+TGG - chr8_2:64436345-64436364 Msa1261960:intron 45.0%
GTAGCTTCACAAAATCACGG+TGG - chr8_2:64436433-64436452 Msa1261960:CDS 45.0%
TTTCTGTCCTTCTCAAGCCT+AGG + chr8_2:64436576-64436595 None:intergenic 45.0%
GATCCAGCAAAGACATGGAT+TGG - chr8_2:64436794-64436813 Msa1261960:CDS 45.0%
ATTTCCTTCAGCAGTCCTTG+TGG - chr8_2:64436831-64436850 Msa1261960:intron 45.0%
!! TTCTAGTTCGACTTGTGCCA+TGG + chr8_2:64437024-64437043 None:intergenic 45.0%
CTTGTAGACGAGGAGGTAAT+TGG + chr8_2:64437171-64437190 None:intergenic 45.0%
! GAAGTTTAGAACAGACTCGG+AGG - chr8_2:64437216-64437235 Msa1261960:intron 45.0%
! CAGGACTTGGTAGTTCTCAA+AGG - chr8_2:64437679-64437698 Msa1261960:CDS 45.0%
! GACTTGGTAGTTCTCAAAGG+CGG - chr8_2:64437682-64437701 Msa1261960:CDS 45.0%
! ACTTGGTAGTTCTCAAAGGC+GGG - chr8_2:64437683-64437702 Msa1261960:CDS 45.0%
GCGAAAACAGGAGAACTTTG+TGG - chr8_2:64437816-64437835 Msa1261960:CDS 45.0%
GCTGAACGATCCAATTATGG+AGG - chr8_2:64438078-64438097 Msa1261960:CDS 45.0%
ACAGAGAACATGTTAGCTCG+CGG - chr8_2:64438115-64438134 Msa1261960:intron 45.0%
GCTGCAAAGCATAGACTTAC+CGG + chr8_2:64438154-64438173 None:intergenic 45.0%
CTATGCTTTGCAGCAGAAAG+AGG - chr8_2:64438160-64438179 Msa1261960:intron 45.0%
TTTGTGATGTTGGGTCGTCA+TGG - chr8_2:64439399-64439418 Msa1261960:intron 45.0%
! AGTACATGGGCTGTGCAATT+TGG + chr8_2:64439486-64439505 None:intergenic 45.0%
CTGATGGAAATGTAGCACTG+TGG - chr8_2:64439658-64439677 Msa1261960:intron 45.0%
CAAGACATTATGCGATACGG+TGG - chr8_2:64439807-64439826 Msa1261960:intron 45.0%
ACGCTTCCAAATAACAGCGT+TGG - chr8_2:64439837-64439856 Msa1261960:intron 45.0%
GTGGTTCCAACGCTGTTATT+TGG + chr8_2:64439846-64439865 None:intergenic 45.0%
TTTCTGTGCCTATTCCTGAG+AGG - chr8_2:64440057-64440076 Msa1261960:intron 45.0%
ACTTTACTATCCTGCCTCTC+AGG + chr8_2:64440074-64440093 None:intergenic 45.0%
! TCTTGAGGTGTAGGCATTGT+TGG + chr8_2:64440125-64440144 None:intergenic 45.0%
ACAATGCCTACACCTCAAGA+TGG - chr8_2:64440125-64440144 Msa1261960:intron 45.0%
AATGGTCCATCTTGAGGTGT+AGG + chr8_2:64440134-64440153 None:intergenic 45.0%
CCATGAAATGGTCCATCTTG+AGG + chr8_2:64440140-64440159 None:intergenic 45.0%
CCTCAAGATGGACCATTTCA+TGG - chr8_2:64440137-64440156 Msa1261960:intron 45.0%
!! TCTTACGCCTTGGTCGATTT+TGG + chr8_2:64440181-64440200 None:intergenic 45.0%
ACTCTTCGGGATAATGTCAG+CGG - chr8_2:64440220-64440239 Msa1261960:intron 45.0%
ATAATGTCAGCGGCAACCAA+AGG - chr8_2:64440230-64440249 Msa1261960:intron 45.0%
TAGTTGTCCTGAAAAGGGTG+AGG - chr8_2:64440340-64440359 Msa1261960:intron 45.0%
!!! TTTTAATTAAGAATTTTATA+GGG + chr8_2:64439368-64439387 None:intergenic 5.0%
!!! ATTTTAATTAAGAATTTTAT+AGG + chr8_2:64439369-64439388 None:intergenic 5.0%
!! CTCTTGGTGCCAGAAGTAAC+CGG - chr8_2:64434123-64434142 Msa1261960:CDS 50.0%
AAAACTCCTCGTCCCAACAG+CGG - chr8_2:64435530-64435549 Msa1261960:intron 50.0%
AAATGGGGCAATCCGCTGTT+GGG + chr8_2:64435545-64435564 None:intergenic 50.0%
!! AACAGCGGATTGCCCCATTT+GGG - chr8_2:64435545-64435564 Msa1261960:intron 50.0%
TTCCCTCATCCAATTCGTGC+GGG + chr8_2:64435592-64435611 None:intergenic 50.0%
CAAACCACCAAACCAGCTTG+TGG + chr8_2:64435620-64435639 None:intergenic 50.0%
!! CACAAGCTGGTTTGGTGGTT+TGG - chr8_2:64435618-64435637 Msa1261960:intron 50.0%
TATTGATCGTGGAGCGGAGA+CGG - chr8_2:64435748-64435767 Msa1261960:intron 50.0%
TAGGAGGAGAATACTCCCCA+AGG - chr8_2:64435776-64435795 Msa1261960:intron 50.0%
ATAGGGATGCCAATGAGACG+GGG + chr8_2:64435854-64435873 None:intergenic 50.0%
GTCCAGGTAAGCCACAAAGA+AGG + chr8_2:64436114-64436133 None:intergenic 50.0%
CCATAGGTTTGCATAGGAGC+AGG + chr8_2:64436254-64436273 None:intergenic 50.0%
CCTGCTCCTATGCAAACCTA+TGG - chr8_2:64436251-64436270 Msa1261960:CDS 50.0%
CTTTGAGCCTAGGCTTGAGA+AGG - chr8_2:64436566-64436585 Msa1261960:intron 50.0%
!! CTATTTGCTGTGCACTGTGC+TGG - chr8_2:64436737-64436756 Msa1261960:CDS 50.0%
! TGCTGGATCATGATAACGCG+CGG + chr8_2:64436783-64436802 None:intergenic 50.0%
TCGCCAATCCATGTCTTTGC+TGG + chr8_2:64436800-64436819 None:intergenic 50.0%
TTGTCCACAAGGACTGCTGA+AGG + chr8_2:64436838-64436857 None:intergenic 50.0%
! CATTCTAGTCACTGGTGCTG+TGG - chr8_2:64437554-64437573 Msa1261960:intron 50.0%
! CTTGGTAGTTCTCAAAGGCG+GGG - chr8_2:64437684-64437703 Msa1261960:CDS 50.0%
ATTGTCGGTGAGGCGAAAAC+AGG - chr8_2:64437804-64437823 Msa1261960:CDS 50.0%
GGAGAACTTTGTGGCGAGAT+TGG - chr8_2:64437825-64437844 Msa1261960:CDS 50.0%
AGAACATGTTAGCTCGCGGT+AGG - chr8_2:64438119-64438138 Msa1261960:intron 50.0%
! TGAAGCAACCCAGAAGCACA+TGG + chr8_2:64438952-64438971 None:intergenic 50.0%
ATACCACCGGCCTTTAGTAG+TGG - chr8_2:64439087-64439106 Msa1261960:intron 50.0%
TGGAAATGTAGCACTGTGGG+AGG - chr8_2:64439662-64439681 Msa1261960:intron 50.0%
CTATCCTGCCTCTCAGGAAT+AGG + chr8_2:64440068-64440087 None:intergenic 50.0%
CGTGGATCCAAAATCGACCA+AGG - chr8_2:64440171-64440190 Msa1261960:intron 50.0%
CTGAAAAGGGTGAGGTTGCT+GGG - chr8_2:64440348-64440367 Msa1261960:intron 50.0%
CAAATGGGGCAATCCGCTGT+TGG + chr8_2:64435546-64435565 None:intergenic 55.0%
!! CAACAGCGGATTGCCCCATT+TGG - chr8_2:64435544-64435563 Msa1261960:intron 55.0%
!! ACAGCGGATTGCCCCATTTG+GGG - chr8_2:64435546-64435565 Msa1261960:intron 55.0%
GGAAGTTTCCCCGCACGAAT+TGG - chr8_2:64435580-64435599 Msa1261960:intron 55.0%
TTCCCCGCACGAATTGGATG+AGG - chr8_2:64435586-64435605 Msa1261960:intron 55.0%
TCCCCGCACGAATTGGATGA+GGG - chr8_2:64435587-64435606 Msa1261960:intron 55.0%
TCCCTCATCCAATTCGTGCG+GGG + chr8_2:64435591-64435610 None:intergenic 55.0%
GAGGGAAAAGTCCCACAAGC+TGG - chr8_2:64435605-64435624 Msa1261960:intron 55.0%
!! AGTCCCACAAGCTGGTTTGG+TGG - chr8_2:64435613-64435632 Msa1261960:intron 55.0%
TGGAGCGGAGACGGAGATTT+AGG - chr8_2:64435757-64435776 Msa1261960:intron 55.0%
AGCGGAGACGGAGATTTAGG+AGG - chr8_2:64435760-64435779 Msa1261960:intron 55.0%
GAGGAGAATACTCCCCAAGG+CGG - chr8_2:64435779-64435798 Msa1261960:intron 55.0%
AGGAGAATACTCCCCAAGGC+GGG - chr8_2:64435780-64435799 Msa1261960:intron 55.0%
TCATCTCCATTCCCCGCCTT+GGG + chr8_2:64435795-64435814 None:intergenic 55.0%
ATCATCTCCATTCCCCGCCT+TGG + chr8_2:64435796-64435815 None:intergenic 55.0%
TCTCAAAGGCGGGGTTGAAC+AGG - chr8_2:64437693-64437712 Msa1261960:CDS 55.0%
CATGTTAGCTCGCGGTAGGA+TGG - chr8_2:64438123-64438142 Msa1261960:intron 55.0%
! TCGCGGTAGGATGGACTTAC+CGG - chr8_2:64438132-64438151 Msa1261960:intron 55.0%
GGGGCAAATCCCAACGTTAG+AGG - chr8_2:64438404-64438423 Msa1261960:CDS 55.0%
TCTGTGGAGCCATGTGCTTC+TGG - chr8_2:64438940-64438959 Msa1261960:intron 55.0%
CTGTGGAGCCATGTGCTTCT+GGG - chr8_2:64438941-64438960 Msa1261960:intron 55.0%
ATGCCACTACTAAAGGCCGG+TGG + chr8_2:64439093-64439112 None:intergenic 55.0%
GCACTGTGGGAGGCTATACT+TGG - chr8_2:64439672-64439691 Msa1261960:intron 55.0%
CTGTGGGAGGCTATACTTGG+AGG - chr8_2:64439675-64439694 Msa1261960:intron 55.0%
TGTGCCTATTCCTGAGAGGC+AGG - chr8_2:64440061-64440080 Msa1261960:intron 55.0%
! CCAGCAACCTCACCCTTTTC+AGG + chr8_2:64440350-64440369 None:intergenic 55.0%
CCTGAAAAGGGTGAGGTTGC+TGG - chr8_2:64440347-64440366 Msa1261960:intron 55.0%
!! CAACGGGCGTTGGGTCTAAC+AGG + chr8_2:64434334-64434353 None:intergenic 60.0%
! TGCCCCATTTGGGGTCTCGT+TGG - chr8_2:64435555-64435574 Msa1261960:intron 60.0%
CGCCAACGAGACCCCAAATG+GGG + chr8_2:64435560-64435579 None:intergenic 60.0%
CCGCCAACGAGACCCCAAAT+GGG + chr8_2:64435561-64435580 None:intergenic 60.0%
! CCCATTTGGGGTCTCGTTGG+CGG - chr8_2:64435558-64435577 Msa1261960:intron 60.0%
! CCATTTGGGGTCTCGTTGGC+GGG - chr8_2:64435559-64435578 Msa1261960:intron 60.0%
GGAGAATACTCCCCAAGGCG+GGG - chr8_2:64435781-64435800 Msa1261960:intron 60.0%
ATACTCCCCAAGGCGGGGAA+TGG - chr8_2:64435786-64435805 Msa1261960:intron 60.0%
CATCTCCATTCCCCGCCTTG+GGG + chr8_2:64435794-64435813 None:intergenic 60.0%
ATGCCAATGAGACGGGGTGG+TGG + chr8_2:64435848-64435867 None:intergenic 60.0%
TGGAACCACGGCGTTACACG+TGG - chr8_2:64439857-64439876 Msa1261960:intron 60.0%
GGCAATCCGCTGTTGGGACG+AGG + chr8_2:64435539-64435558 None:intergenic 65.0%
CCCGCCAACGAGACCCCAAA+TGG + chr8_2:64435562-64435581 None:intergenic 65.0%
! CAATGAGACGGGGTGGTGGC+AGG + chr8_2:64435844-64435863 None:intergenic 65.0%
CTGCCACCACCCCGTCTCAT+TGG - chr8_2:64435842-64435861 Msa1261960:intron 65.0%
GGGATGCCAATGAGACGGGG+TGG + chr8_2:64435851-64435870 None:intergenic 65.0%
CTCGGAGGGCTTGCAGCAAC+AGG - chr8_2:64437231-64437250 Msa1261960:intron 65.0%
GACTGCCACGTGTAACGCCG+TGG + chr8_2:64439865-64439884 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 64433920 64440730 64433920 ID=Msa1261960;Name=Msa1261960
chr8_2 mRNA 64433920 64440730 64433920 ID=Msa1261960-mRNA-1;Parent=Msa1261960;Name=Msa1261960-mRNA-1;_AED=0.08;_eAED=0.08;_QI=112|0.9|0.81|1|1|1|11|150|893
chr8_2 exon 64433920 64434995 64433920 ID=Msa1261960-mRNA-1:exon:20877;Parent=Msa1261960-mRNA-1
chr8_2 exon 64436225 64436300 64436225 ID=Msa1261960-mRNA-1:exon:20876;Parent=Msa1261960-mRNA-1
chr8_2 exon 64436389 64436583 64436389 ID=Msa1261960-mRNA-1:exon:20875;Parent=Msa1261960-mRNA-1
chr8_2 exon 64436661 64436846 64436661 ID=Msa1261960-mRNA-1:exon:20874;Parent=Msa1261960-mRNA-1
chr8_2 exon 64436936 64436968 64436936 ID=Msa1261960-mRNA-1:exon:20873;Parent=Msa1261960-mRNA-1
chr8_2 exon 64437075 64437173 64437075 ID=Msa1261960-mRNA-1:exon:20872;Parent=Msa1261960-mRNA-1
chr8_2 exon 64437278 64437523 64437278 ID=Msa1261960-mRNA-1:exon:20871;Parent=Msa1261960-mRNA-1
chr8_2 exon 64437602 64437919 64437602 ID=Msa1261960-mRNA-1:exon:20870;Parent=Msa1261960-mRNA-1
chr8_2 exon 64438015 64438107 64438015 ID=Msa1261960-mRNA-1:exon:20869;Parent=Msa1261960-mRNA-1
chr8_2 exon 64438340 64438685 64438340 ID=Msa1261960-mRNA-1:exon:20868;Parent=Msa1261960-mRNA-1
chr8_2 exon 64440455 64440730 64440455 ID=Msa1261960-mRNA-1:exon:20867;Parent=Msa1261960-mRNA-1
chr8_2 five_prime_UTR 64440619 64440730 64440619 ID=Msa1261960-mRNA-1:five_prime_utr;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64440455 64440618 64440455 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64438340 64438685 64438340 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64438015 64438107 64438015 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64437602 64437919 64437602 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64437278 64437523 64437278 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64437075 64437173 64437075 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64436936 64436968 64436936 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64436661 64436846 64436661 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64436389 64436583 64436389 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64436225 64436300 64436225 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 CDS 64434070 64434995 64434070 ID=Msa1261960-mRNA-1:cds;Parent=Msa1261960-mRNA-1
chr8_2 three_prime_UTR 64433920 64434069 64433920 ID=Msa1261960-mRNA-1:three_prime_utr;Parent=Msa1261960-mRNA-1
Gene Sequence

>Msa1261960

ATGGTGCTTCCAATGACTATGTGTGGCCAAGAAGAACTTGAATTATCAAGAGATGGAAGTCACTATAGTCTCACAACCGGAATATTACCTTCTCTTGGTGCCAGAAGTAACCGGAGAGTTAAACTCAGACCTCTCATTATATCTCCTTATGATCGTCGTTACCGGATATGGGAAACTTTCCTTGTTACATTGGTTGTGTATACTGCTTGGGTATCTCCATTTGAATTTGGATTCCTTAAGAAACCACAAAAACCCCTTTCTGTTACAGATAATATTGTCAATGGATTCTTTGCTATAGATATAGTTCTAACCTTCTTTGTGGCTTACCTGGACAAAACTACCTATTTGTTCGTAGATAACCCAAAACAGATTGCTTGGAAATATGCAAGAACTTGGTTTGTACTTGATTTTATCTCCATCATTCCTTCTGAGCTTGTTGCACATATATCTCCTGCTCCTATGCAAACCTATGGCCTATTCAACATGCTTAGGCTTTGGCGTCTTCGTAGATTTATGACAGTAAATGTTGTTTTCTTTGAGCCTAGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCAAAGCTTATTTGTGTTACTCTATTTGCTGTGCACTGTGCTGGATGCTTTTATTATCTTCTTGCCGCGCGTTATCATGATCCAGCAAAGACATGGATTGGCGAATCAATGTCAAATTTCCTTCAGCAGTCCTTGTGGACAAGATATGTGACAACTATATACTGGTCCATCACTACTTTGACAACAGTTGGTTATGGAGATTTGCATCCGGTGAATGAAAGGGAGATGATCTTTGTCATATTTTACATGCTCTTTAATCTAGGATTAACAGCATATCTGATTGGTAACATGACTAACTTAGTTGTCCATGGCACAAGTCGAACTAGAAAATTTAGGGATACCATACAAGCTGCATCAAGTTTTGCTCATAGGAACCAATTACCTCCTCGTCTACAAGATCAAATGCTTGCTCACTTGTGTTTGAAGTTTAGAACAGACTCGGAGGGCTTGCAGCAACAGGAGACACTTGAGTCTCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTCTATTCTCTGATGGATAAGGTTTACTTATTCAAGGGGGTTTCAAATGATTTGCTCTTTCAATTGGTATCTGAGATGAAGCCGGAGTATTTTCCACCTAAAGAAGATGTTATCTTACAAAATGAAGCTCCAACTGATTTTTACATTCTAGTCACTGGTGCTGTGGACTTGGTAGTTCTCAAAGGCGGGGTTGAACAGATTGTCGGTGAGGCGAAAACAGGAGAACTTTGTGGCGAGATTGGTGTACTTTGCTATAAGCCACAACATTTTACAGTTAGAACCAAACGATTAAGTCAACTGTTGAGGCTGAACCGTACCACCTTCTTGAATATTGTTCAAGCTAATGTTGGTGACGGAACCATAATCATGAATAACCTTCTTCAGCATTTGAAAGAGCTGAACGATCCAATTATGGAGGGAGTTTTGGTCGAGACAGAGAACATGTTAGCTCGCGGTAGGATGGACTTACCGGTAAGTCTATGCTTTGCAGCAGAAAGAGGAGATGATTTGTTGTTACAACAATTGTTAAAACGAGGTTTGGATCCAAATGAATCTGACAATAATGGAAGGACAGCTTTGCATATAGCAGCATGTAAAGGAAAAGAAAACTGTGTTTTACTTCTGTTAGATTATGGGGCAAATCCCAACGTTAGAGATTCTGATGGAAATGTAGCACTGTGGGAGGCTATACTTGGAGGACATGAATCAGTAACAAAACTTTTGGCAGAAAATGGTGCTACCTTGCAAATTGGTGATGTTGGTCAATATGCATGCACTGCAGTTGAACAGAACAATCTCAATTTGTTGCAAGACATTATGCGATACGGTGGAGACATCACGCTTCCAAATAACAGCGTTGGAACCACGGCGTTACACGTGGCAGTCTCCGAAGACAGTGTTGAAATTGTCAAATTCCTATTAGAACATGGTGCTAACATTGACAAACAAGATAAATATGGTTGGAGTCCAAGAGATTTAGCTGACCAACAAGGACATACAGAAATCAAAGCTATTTTTGAAGCCAAAGGAGAAGATAATAGTAAGATTCAATCTTTTGTTTCTGTGCCTATTCCTGAGAGGCAGGATAGTAAAGTAAGGTACCTTGGTAGATTTACAAGTGAACCAACAATGCCTACACCTCAAGATGGACCATTTCATGGAAATGATGGTTCGTGGATCCAAAATCGACCAAGGCGTAAGAATAATAACTTTCATAATTCACTCTTCGGGATAATGTCAGCGGCAACCAAAGGAGAAAATGACCAATTTTTCAGTGTTCAAATGAATAACAATGCAAGGAATGGTGTGAAGAGTGTTTCACGTCCAACCAGAGTAACAATTAGTTGTCCTGAAAAGGGTGAGGTTGCTGGGAAGCTTGTGTTGCTACCTGAAAGTTTTCAAGAGTTACTTGAAATTGGATCTAAGAAATTTGGTATAGTTGCTACAAAGGTTGTTTGCAAAGATGGAGCTGAAATTGATGATATTGAGGTTATTAGAGATGGTGATCATCTTGTTTTTGTTGGTACTGGTGGGGTGCTAGAATCCAATTGTACAACACCCTCTAATGGTGTCAATCCATAA
Protein sequence

>Msa1261960

MVLPMTMCGQEELELSRDGSHYSLTTGILPSLGARSNRRVKLRPLIISPYDRRYRIWETFLVTLVVYTAWVSPFEFGFLKKPQKPLSVTDNIVNGFFAIDIVLTFFVAYLDKTTYLFVDNPKQIAWKYARTWFVLDFISIIPSELVAHISPAPMQTYGLFNMLRLWRLRRFMTVNVVFFEPRLEKDRNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPAKTWIGESMSNFLQQSLWTRYVTTIYWSITTLTTVGYGDLHPVNEREMIFVIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAHRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLESLPKAIRSSISHYLFYSLMDKVYLFKGVSNDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKGGVEQIVGEAKTGELCGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVSLCFAAERGDDLLLQQLLKRGLDPNESDNNGRTALHIAACKGKENCVLLLLDYGANPNVRDSDGNVALWEAILGGHESVTKLLAENGATLQIGDVGQYACTAVEQNNLNLLQDIMRYGGDITLPNNSVGTTALHVAVSEDSVEIVKFLLEHGANIDKQDKYGWSPRDLADQQGHTEIKAIFEAKGEDNSKIQSFVSVPIPERQDSKVRYLGRFTSEPTMPTPQDGPFHGNDGSWIQNRPRRKNNNFHNSLFGIMSAATKGENDQFFSVQMNNNARNGVKSVSRPTRVTISCPEKGEVAGKLVLLPESFQELLEIGSKKFGIVATKVVCKDGAEIDDIEVIRDGDHLVFVGTGGVLESNCTTPSNGVNP*