Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351420 | AET02882.2 | 81.707 | 410 | 26 | 1 | 1 | 361 | 1 | 410 | 0.0 | 673 |
Msa1351420 | AET02882.2 | 95.238 | 63 | 3 | 0 | 363 | 425 | 495 | 557 | 1.46e-27 | 127 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351420 | sp|Q93X23|MYRS_QUEIL | 44.634 | 410 | 162 | 5 | 4 | 361 | 18 | 414 | 1.68e-111 | 343 |
Msa1351420 | sp|Q93X23|MYRS_QUEIL | 38.261 | 115 | 57 | 3 | 329 | 430 | 453 | 566 | 3.82e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351420 | G7LB17 | 81.707 | 410 | 26 | 1 | 1 | 361 | 1 | 410 | 0.0 | 673 |
Msa1351420 | G7LB17 | 95.238 | 63 | 3 | 0 | 363 | 425 | 495 | 557 | 6.98e-28 | 127 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0639460 | Msa1351420 | 0.812331 | 4.473875e-51 | -8.615850e-47 |
Msa0682360 | Msa1351420 | 0.835654 | 1.479258e-56 | -8.615850e-47 |
Msa1228190 | Msa1351420 | 0.804955 | 1.685037e-49 | -8.615850e-47 |
Msa1243020 | Msa1351420 | 0.940604 | 1.755063e-100 | -8.615850e-47 |
Msa1292010 | Msa1351420 | 0.802113 | 6.544125e-49 | -8.615850e-47 |
Msa1323940 | Msa1351420 | 0.961123 | 2.442431e-119 | -8.615850e-47 |
Msa0999340 | Msa1351420 | 0.826678 | 2.377271e-54 | -8.615850e-47 |
Msa0999350 | Msa1351420 | 0.822943 | 1.806929e-53 | -8.615850e-47 |
Msa0999390 | Msa1351420 | 0.820920 | 5.315822e-53 | -8.615850e-47 |
Msa0999400 | Msa1351420 | 0.823866 | 1.099564e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351420 | MtrunA17_Chr8g0357411 | 79.512 | 410 | 35 | 1 | 1 | 361 | 1 | 410 | 0.0 | 656 |
Msa1351420 | MtrunA17_Chr8g0357411 | 87.302 | 63 | 8 | 0 | 363 | 425 | 495 | 557 | 2.50e-28 | 117 |
Msa1351420 | MtrunA17_Chr2g0310331 | 55.656 | 442 | 126 | 6 | 1 | 378 | 1 | 436 | 7.73e-158 | 458 |
Msa1351420 | MtrunA17_Chr2g0310331 | 68.254 | 63 | 20 | 0 | 363 | 425 | 492 | 554 | 1.01e-18 | 88.6 |
Msa1351420 | MtrunA17_Chr8g0357221 | 75.517 | 290 | 22 | 1 | 1 | 241 | 1 | 290 | 1.57e-150 | 428 |
Msa1351420 | MtrunA17_Chr2g0310401 | 60.515 | 233 | 78 | 3 | 159 | 378 | 51 | 282 | 3.21e-95 | 293 |
Msa1351420 | MtrunA17_Chr2g0310401 | 61.905 | 63 | 24 | 0 | 363 | 425 | 338 | 400 | 1.32e-13 | 72.4 |
Msa1351420 | MtrunA17_Chr4g0023911 | 36.579 | 380 | 177 | 8 | 36 | 361 | 32 | 401 | 1.75e-74 | 243 |
Msa1351420 | MtrunA17_Chr4g0042111 | 33.803 | 355 | 178 | 5 | 54 | 352 | 21 | 374 | 2.09e-59 | 203 |
Msa1351420 | MtrunA17_Chr6g0465441 | 34.015 | 391 | 189 | 9 | 46 | 374 | 7 | 390 | 5.21e-58 | 199 |
Msa1351420 | MtrunA17_Chr4g0024691 | 36.842 | 342 | 160 | 8 | 48 | 334 | 15 | 355 | 2.15e-57 | 197 |
Msa1351420 | MtrunA17_Chr6g0465981 | 33.512 | 373 | 190 | 7 | 45 | 361 | 4 | 374 | 3.33e-57 | 192 |
Msa1351420 | MtrunA17_Chr6g0465871 | 33.512 | 373 | 190 | 7 | 45 | 361 | 4 | 374 | 3.33e-57 | 192 |
Msa1351420 | MtrunA17_Chr6g0466081 | 33.512 | 373 | 190 | 7 | 45 | 361 | 4 | 374 | 3.33e-57 | 192 |
Msa1351420 | MtrunA17_Chr3g0105071 | 34.521 | 365 | 180 | 7 | 53 | 360 | 15 | 377 | 8.43e-57 | 196 |
Msa1351420 | MtrunA17_Chr6g0466051 | 33.871 | 372 | 188 | 7 | 45 | 360 | 4 | 373 | 1.79e-56 | 195 |
Msa1351420 | MtrunA17_Chr3g0082691 | 34.521 | 365 | 180 | 7 | 53 | 360 | 11 | 373 | 1.85e-56 | 195 |
Msa1351420 | MtrunA17_Chr8g0336181 | 34.771 | 371 | 182 | 8 | 50 | 361 | 8 | 377 | 2.15e-56 | 195 |
Msa1351420 | MtrunA17_Chr6g0465911 | 33.602 | 372 | 189 | 7 | 45 | 360 | 4 | 373 | 8.57e-56 | 193 |
Msa1351420 | MtrunA17_Chr6g0451711 | 32.527 | 372 | 192 | 6 | 46 | 360 | 8 | 377 | 1.32e-55 | 192 |
Msa1351420 | MtrunA17_Chr7g0236991 | 33.889 | 360 | 181 | 8 | 55 | 359 | 14 | 371 | 6.65e-54 | 188 |
Msa1351420 | MtrunA17_Chr5g0425371 | 33.518 | 361 | 184 | 6 | 55 | 360 | 14 | 373 | 7.45e-54 | 188 |
Msa1351420 | MtrunA17_Chr6g0465931 | 33.837 | 331 | 164 | 5 | 85 | 361 | 10 | 339 | 2.55e-53 | 181 |
Msa1351420 | MtrunA17_Chr6g0466111 | 33.837 | 331 | 164 | 5 | 85 | 361 | 10 | 339 | 2.99e-53 | 181 |
Msa1351420 | MtrunA17_Chr2g0319041 | 31.503 | 346 | 180 | 5 | 53 | 341 | 12 | 357 | 3.27e-53 | 186 |
Msa1351420 | MtrunA17_Chr7g0237001 | 33.611 | 360 | 182 | 8 | 55 | 359 | 14 | 371 | 3.43e-53 | 186 |
Msa1351420 | MtrunA17_Chr7g0237041 | 33.611 | 360 | 182 | 8 | 55 | 359 | 14 | 371 | 3.43e-53 | 186 |
Msa1351420 | MtrunA17_Chr7g0237081 | 33.611 | 360 | 182 | 8 | 55 | 359 | 14 | 371 | 3.43e-53 | 186 |
Msa1351420 | MtrunA17_Chr7g0237051 | 33.611 | 360 | 182 | 8 | 55 | 359 | 14 | 371 | 3.43e-53 | 186 |
Msa1351420 | MtrunA17_Chr2g0323131 | 33.162 | 389 | 192 | 9 | 25 | 361 | 14 | 386 | 3.77e-53 | 186 |
Msa1351420 | MtrunA17_Chr6g0465851 | 33.939 | 330 | 163 | 5 | 85 | 360 | 10 | 338 | 8.88e-52 | 182 |
Msa1351420 | MtrunA17_Chr7g0236951 | 34.906 | 318 | 152 | 6 | 95 | 359 | 1 | 316 | 1.82e-51 | 176 |
Msa1351420 | MtrunA17_Chr2g0310411 | 55.233 | 172 | 66 | 4 | 1 | 166 | 1 | 167 | 3.96e-51 | 170 |
Msa1351420 | MtrunA17_Chr7g0237031 | 34.277 | 318 | 154 | 6 | 95 | 359 | 1 | 316 | 1.32e-50 | 173 |
Msa1351420 | MtrunA17_Chr2g0319051 | 31.024 | 332 | 172 | 4 | 85 | 360 | 4 | 334 | 2.75e-50 | 177 |
Msa1351420 | MtrunA17_Chr7g0236961 | 34.906 | 318 | 152 | 6 | 95 | 359 | 1 | 316 | 4.46e-50 | 177 |
Msa1351420 | MtrunA17_Chr7g0237011 | 34.277 | 318 | 154 | 6 | 95 | 359 | 1 | 316 | 3.23e-49 | 174 |
Msa1351420 | MtrunA17_Chr4g0008621 | 29.810 | 369 | 191 | 6 | 55 | 360 | 20 | 383 | 3.29e-49 | 173 |
Msa1351420 | MtrunA17_Chr8g0357231 | 100.000 | 80 | 0 | 0 | 282 | 361 | 1 | 80 | 4.79e-49 | 167 |
Msa1351420 | MtrunA17_Chr8g0357231 | 95.238 | 63 | 3 | 0 | 363 | 425 | 165 | 227 | 8.46e-34 | 127 |
Msa1351420 | MtrunA17_Chr5g0431571 | 33.607 | 366 | 183 | 8 | 53 | 361 | 7 | 369 | 6.65e-48 | 172 |
Msa1351420 | MtrunA17_Chr5g0431651 | 32.240 | 366 | 188 | 7 | 53 | 360 | 9 | 372 | 6.83e-48 | 172 |
Msa1351420 | MtrunA17_Chr2g0323151 | 34.211 | 304 | 146 | 5 | 107 | 361 | 4 | 302 | 8.63e-47 | 167 |
Msa1351420 | MtrunA17_Chr5g0445511 | 40.000 | 205 | 122 | 1 | 157 | 361 | 24 | 227 | 3.05e-45 | 157 |
Msa1351420 | MtrunA17_Chr7g0236971 | 40.887 | 203 | 118 | 2 | 157 | 359 | 19 | 219 | 2.50e-42 | 154 |
Msa1351420 | MtrunA17_Chr4g0048911 | 25.956 | 366 | 198 | 7 | 74 | 371 | 44 | 404 | 8.68e-36 | 139 |
Msa1351420 | MtrunA17_Chr2g0280581 | 25.205 | 365 | 205 | 5 | 82 | 378 | 5 | 369 | 3.12e-29 | 119 |
Msa1351420 | MtrunA17_Chr4g0048921 | 27.557 | 352 | 184 | 7 | 101 | 386 | 81 | 427 | 6.26e-29 | 119 |
Msa1351420 | MtrunA17_Chr3g0109031 | 23.795 | 332 | 196 | 6 | 85 | 361 | 7 | 336 | 8.10e-27 | 112 |
Msa1351420 | MtrunA17_Chr3g0108941 | 23.796 | 353 | 203 | 5 | 85 | 371 | 7 | 359 | 1.02e-26 | 112 |
Msa1351420 | MtrunA17_Chr3g0109001 | 24.363 | 353 | 201 | 5 | 85 | 371 | 7 | 359 | 1.03e-26 | 112 |
Msa1351420 | MtrunA17_Chr3g0109021 | 22.380 | 353 | 207 | 6 | 85 | 371 | 7 | 358 | 2.02e-25 | 108 |
Msa1351420 | MtrunA17_Chr3g0108991 | 22.946 | 353 | 205 | 6 | 85 | 371 | 7 | 358 | 3.52e-25 | 107 |
Msa1351420 | MtrunA17_Chr3g0108951 | 22.946 | 353 | 205 | 6 | 85 | 371 | 7 | 358 | 3.52e-25 | 107 |
Msa1351420 | MtrunA17_Chr3g0105691 | 23.164 | 354 | 203 | 8 | 85 | 371 | 40 | 391 | 1.31e-24 | 106 |
Msa1351420 | MtrunA17_Chr3g0108981 | 23.353 | 334 | 190 | 5 | 104 | 371 | 1 | 334 | 1.88e-24 | 105 |
Msa1351420 | MtrunA17_Chr3g0108961 | 23.353 | 334 | 190 | 5 | 104 | 371 | 1 | 334 | 1.88e-24 | 105 |
Msa1351420 | MtrunA17_Chr6g0477111 | 25.000 | 308 | 174 | 6 | 109 | 361 | 6 | 311 | 5.48e-24 | 103 |
Msa1351420 | MtrunA17_Chr7g0217361 | 38.525 | 122 | 75 | 0 | 239 | 360 | 8 | 129 | 8.90e-24 | 100 |
Msa1351420 | MtrunA17_Chr3g0099031 | 23.457 | 324 | 184 | 6 | 85 | 349 | 7 | 325 | 2.44e-23 | 102 |
Msa1351420 | MtrunA17_Chr6g0477121 | 29.730 | 185 | 128 | 2 | 166 | 349 | 60 | 243 | 2.63e-23 | 101 |
Msa1351420 | MtrunA17_Chr2g0319081 | 34.965 | 143 | 91 | 1 | 218 | 360 | 118 | 258 | 2.90e-23 | 101 |
Msa1351420 | MtrunA17_Chr2g0319081 | 38.017 | 121 | 63 | 5 | 55 | 165 | 20 | 138 | 1.87e-12 | 68.6 |
Msa1351420 | MtrunA17_Chr7g0233861 | 40.741 | 135 | 71 | 1 | 180 | 314 | 33 | 158 | 4.72e-23 | 95.9 |
Msa1351420 | MtrunA17_Chr3g0109011 | 23.054 | 334 | 190 | 6 | 104 | 371 | 1 | 333 | 6.17e-23 | 100 |
Msa1351420 | MtrunA17_Chr3g0108971 | 22.754 | 334 | 191 | 6 | 104 | 371 | 1 | 333 | 7.09e-23 | 100 |
Msa1351420 | MtrunA17_Chr7g0217351 | 27.225 | 191 | 87 | 4 | 104 | 242 | 83 | 273 | 3.05e-15 | 76.3 |
Msa1351420 | MtrunA17_Chr2g0310121 | 23.547 | 327 | 176 | 8 | 106 | 359 | 275 | 600 | 4.39e-15 | 77.8 |
Msa1351420 | MtrunA17_Chr6g0466031 | 41.772 | 79 | 46 | 0 | 282 | 360 | 2 | 80 | 4.62e-14 | 72.0 |
Msa1351420 | MtrunA17_Chr6g0466021 | 35.000 | 140 | 82 | 5 | 45 | 177 | 4 | 141 | 1.14e-13 | 69.7 |
Msa1351420 | MtrunA17_Chr7g0237061 | 43.662 | 71 | 40 | 0 | 282 | 352 | 2 | 72 | 1.22e-13 | 70.5 |
Msa1351420 | MtrunA17_Chr2g0281651 | 31.618 | 136 | 89 | 2 | 217 | 352 | 43 | 174 | 1.97e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1351420 | AT3G25820.2 | 39.340 | 394 | 178 | 7 | 28 | 361 | 17 | 409 | 5.09e-86 | 270 |
Msa1351420 | AT3G25820.1 | 39.340 | 394 | 178 | 7 | 28 | 361 | 17 | 409 | 8.74e-85 | 271 |
Msa1351420 | AT3G25830.1 | 39.340 | 394 | 178 | 7 | 28 | 361 | 17 | 409 | 8.74e-85 | 271 |
Msa1351420 | AT2G24210.1 | 38.677 | 393 | 175 | 6 | 52 | 378 | 43 | 435 | 5.56e-83 | 266 |
Msa1351420 | AT4G16740.2 | 37.260 | 365 | 172 | 5 | 53 | 361 | 24 | 387 | 5.94e-80 | 253 |
Msa1351420 | AT4G16740.1 | 37.260 | 365 | 172 | 5 | 53 | 361 | 24 | 387 | 2.86e-78 | 253 |
Msa1351420 | AT3G25810.1 | 36.562 | 413 | 195 | 8 | 14 | 361 | 1 | 411 | 7.96e-75 | 245 |
Msa1351420 | AT3G25820.4 | 37.673 | 361 | 161 | 7 | 28 | 328 | 17 | 373 | 3.56e-72 | 232 |
Msa1351420 | AT3G25820.3 | 37.673 | 361 | 161 | 7 | 28 | 328 | 17 | 373 | 3.56e-72 | 232 |
Msa1351420 | AT4G16730.1 | 35.411 | 353 | 166 | 5 | 70 | 361 | 5 | 356 | 2.02e-68 | 226 |
Msa1351420 | AT4G16740.4 | 37.107 | 318 | 144 | 4 | 53 | 314 | 24 | 341 | 5.51e-66 | 216 |
Msa1351420 | AT4G16740.3 | 37.107 | 318 | 144 | 4 | 53 | 314 | 24 | 341 | 5.51e-66 | 216 |
Msa1351420 | AT4G16730.2 | 33.237 | 346 | 160 | 5 | 110 | 385 | 2 | 346 | 7.01e-62 | 208 |
Msa1351420 | AT5G23960.2 | 27.824 | 363 | 207 | 5 | 53 | 361 | 5 | 366 | 2.02e-45 | 165 |
Msa1351420 | AT5G23960.1 | 28.219 | 365 | 205 | 6 | 53 | 361 | 5 | 368 | 7.45e-45 | 164 |
Msa1351420 | AT3G14540.2 | 26.923 | 416 | 242 | 10 | 1 | 360 | 11 | 420 | 9.89e-40 | 149 |
Msa1351420 | AT3G14520.1 | 27.407 | 405 | 220 | 10 | 39 | 374 | 49 | 448 | 2.00e-39 | 149 |
Msa1351420 | AT3G14540.1 | 26.923 | 416 | 242 | 10 | 1 | 360 | 11 | 420 | 3.59e-39 | 149 |
Msa1351420 | AT1G31950.2 | 28.035 | 346 | 183 | 8 | 60 | 344 | 70 | 410 | 2.04e-38 | 145 |
Msa1351420 | AT1G31950.1 | 28.116 | 345 | 183 | 8 | 60 | 344 | 70 | 409 | 3.52e-38 | 146 |
Msa1351420 | AT1G31950.3 | 28.035 | 346 | 183 | 8 | 60 | 344 | 70 | 410 | 5.31e-38 | 145 |
Msa1351420 | AT3G29410.1 | 27.841 | 352 | 199 | 8 | 54 | 350 | 62 | 413 | 6.96e-38 | 145 |
Msa1351420 | AT1G70080.1 | 26.525 | 377 | 215 | 7 | 25 | 341 | 37 | 411 | 7.16e-38 | 145 |
Msa1351420 | AT3G14490.1 | 27.042 | 355 | 202 | 6 | 46 | 344 | 52 | 405 | 1.12e-35 | 139 |
Msa1351420 | AT3G32030.1 | 28.426 | 394 | 210 | 10 | 20 | 344 | 17 | 407 | 3.13e-35 | 137 |
Msa1351420 | AT4G15870.1 | 26.176 | 340 | 193 | 6 | 100 | 385 | 116 | 451 | 6.95e-35 | 137 |
Msa1351420 | AT3G29410.2 | 27.852 | 298 | 163 | 5 | 105 | 350 | 11 | 308 | 3.42e-34 | 134 |
Msa1351420 | AT1G61680.2 | 28.571 | 301 | 167 | 5 | 95 | 349 | 82 | 380 | 1.47e-30 | 124 |
Msa1351420 | AT1G33750.1 | 26.667 | 360 | 203 | 9 | 40 | 344 | 54 | 407 | 1.66e-30 | 124 |
Msa1351420 | AT1G61680.1 | 27.922 | 308 | 167 | 5 | 95 | 349 | 82 | 387 | 1.40e-29 | 121 |
Msa1351420 | AT4G20210.1 | 24.638 | 414 | 234 | 11 | 8 | 352 | 8 | 412 | 2.89e-28 | 117 |
Msa1351420 | AT1G48820.1 | 28.939 | 311 | 188 | 6 | 62 | 340 | 70 | 379 | 4.93e-28 | 116 |
Msa1351420 | AT5G44630.1 | 25.000 | 420 | 241 | 9 | 58 | 406 | 16 | 432 | 2.09e-26 | 112 |
Msa1351420 | AT4G13300.1 | 24.862 | 362 | 212 | 7 | 58 | 363 | 15 | 372 | 2.60e-26 | 111 |
Msa1351420 | AT3G29110.1 | 24.000 | 425 | 250 | 10 | 33 | 387 | 32 | 453 | 5.96e-26 | 110 |
Msa1351420 | AT2G23230.2 | 25.063 | 395 | 226 | 10 | 1 | 331 | 1 | 389 | 1.70e-25 | 109 |
Msa1351420 | AT2G23230.1 | 25.063 | 395 | 226 | 10 | 1 | 331 | 1 | 389 | 1.79e-25 | 109 |
Msa1351420 | AT4G13280.1 | 25.993 | 277 | 152 | 4 | 119 | 342 | 79 | 355 | 2.13e-24 | 105 |
Msa1351420 | AT4G13280.2 | 25.993 | 277 | 152 | 4 | 119 | 342 | 79 | 355 | 2.20e-24 | 105 |
Msa1351420 | AT1G48800.1 | 24.363 | 353 | 204 | 8 | 55 | 345 | 63 | 414 | 1.68e-23 | 103 |
Msa1351420 | AT1G66020.2 | 23.291 | 395 | 224 | 11 | 37 | 366 | 39 | 419 | 9.15e-23 | 100 |
Msa1351420 | AT1G66020.1 | 23.383 | 402 | 229 | 11 | 37 | 373 | 39 | 426 | 1.66e-22 | 100 |
Msa1351420 | AT3G29190.1 | 35.052 | 194 | 116 | 5 | 159 | 348 | 217 | 404 | 2.01e-22 | 100 |
Msa1351420 | AT4G20200.1 | 25.131 | 382 | 211 | 12 | 32 | 348 | 36 | 407 | 8.97e-22 | 98.2 |
Msa1351420 | AT5G48110.1 | 31.818 | 154 | 103 | 2 | 200 | 352 | 2 | 154 | 1.39e-21 | 95.5 |
Msa1351420 | AT4G20230.1 | 26.860 | 242 | 162 | 5 | 178 | 406 | 240 | 479 | 9.11e-19 | 89.4 |
Msa1351420 | AT4G20230.2 | 26.860 | 242 | 162 | 5 | 178 | 406 | 252 | 491 | 1.04e-18 | 89.0 |
Msa1351420 | AT1G79460.1 | 30.147 | 136 | 91 | 2 | 217 | 352 | 456 | 587 | 9.09e-12 | 67.8 |
Find 60 sgRNAs with CRISPR-Local
Find 633 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTAATTTCTTTGTTAAAA+TGG | 0.095292 | tig0012275:-28341 | None:intergenic |
TTTACTCCAATTCGCTAAAT+TGG | 0.181502 | tig0012275:+29413 | Msa1351420:CDS |
CTAAATTCCAACCTTCAATT+TGG | 0.197481 | tig0012275:+28012 | Msa1351420:CDS |
CTTTGGATCTTCCATTGAAT+TGG | 0.264293 | tig0012275:+29322 | Msa1351420:CDS |
ATTCTGAATTGTTCAAAATC+TGG | 0.272530 | tig0012275:-35875 | None:intergenic |
ATGCACACTTTAGTTCTTCT+AGG | 0.272677 | tig0012275:-29461 | None:intergenic |
ATCATCAACTGTGGTAATTA+AGG | 0.283666 | tig0012275:-35918 | None:intergenic |
TACTTTATATTCACTACTTA+AGG | 0.308038 | tig0012275:-28054 | None:intergenic |
AAGCATATTTGCATGTAGTA+TGG | 0.312552 | tig0012275:-36125 | None:intergenic |
TGAAATCCAATTTAGCGAAT+TGG | 0.313439 | tig0012275:-29419 | None:intergenic |
AGTTGCTTACTGCTTTCTTC+AGG | 0.318825 | tig0012275:-36226 | None:intergenic |
GAGATCAACGCAAAGTTCTA+AGG | 0.332792 | tig0012275:+28229 | Msa1351420:CDS |
CAAAGAAATTAGGGACATAT+TGG | 0.340628 | tig0012275:+28350 | Msa1351420:CDS |
AGTCCATGATGTCTACATTA+TGG | 0.344971 | tig0012275:+37771 | Msa1351420:CDS |
TATGATGCCTTGCATTGAAT+TGG | 0.356253 | tig0012275:-27945 | None:intergenic |
AAATGCATTATGAACGAAAC+TGG | 0.357987 | tig0012275:+37716 | Msa1351420:CDS |
TGAAGAGCTCAAGTTCTTCC+AGG | 0.364896 | tig0012275:-35961 | None:intergenic |
AGAGATAACGGCCGGTTGTT+AGG | 0.375487 | tig0012275:-27894 | None:intergenic |
ATAATCACGAGCCTCTATTT+CGG | 0.397407 | tig0012275:-37744 | None:intergenic |
ACTTCTAATAAGTCATGCTT+TGG | 0.407606 | tig0012275:+29305 | Msa1351420:CDS |
GAATTGTTGAGAACTTTGTT+TGG | 0.420249 | tig0012275:+35831 | Msa1351420:CDS |
ATATTCTTTGAGAAAATTTG+TGG | 0.422729 | tig0012275:-29253 | None:intergenic |
TTAATGCAGGAAGAAATTTA+CGG | 0.426943 | tig0012275:+28207 | Msa1351420:intron |
ATAATGCATTTATTTAACTT+TGG | 0.429400 | tig0012275:-37704 | None:intergenic |
GAGAACTTTGTTTGGAATGT+TGG | 0.432073 | tig0012275:+35839 | Msa1351420:CDS |
CGAGAAATTGTCCAATTCAA+TGG | 0.434579 | tig0012275:-29333 | None:intergenic |
TAATCATTGGTCCAAATTGA+AGG | 0.438142 | tig0012275:-28023 | None:intergenic |
ATTGATGTATTGCAAAGGAT+TGG | 0.446275 | tig0012275:+28309 | Msa1351420:CDS |
TCTTCACAGAAGCTATTGAT+AGG | 0.451974 | tig0012275:+35978 | Msa1351420:CDS |
TAGATGGGATTTGAATGCCT+TGG | 0.458301 | tig0012275:+36094 | Msa1351420:intron |
TTAAAGAGTGAAAATGAGAC+AGG | 0.459331 | tig0012275:+37674 | Msa1351420:intron |
GATGATGTGTATGATTTGTA+TGG | 0.476992 | tig0012275:+35935 | Msa1351420:CDS |
AAACGCTTTCTCCTAACAAC+CGG | 0.495343 | tig0012275:+27883 | Msa1351420:CDS |
TAAGGACTGAATATAATCAT+TGG | 0.497500 | tig0012275:-28036 | None:intergenic |
CTTACTGCTTTCTTCAGGTA+CGG | 0.500237 | tig0012275:-36221 | None:intergenic |
AACTGGAGCTTCCGAAATAG+AGG | 0.500437 | tig0012275:+37733 | Msa1351420:CDS |
CATTGGTCCAAATTGAAGGT+TGG | 0.506340 | tig0012275:-28019 | None:intergenic |
CTTCCATAATGTAGACATCA+TGG | 0.522455 | tig0012275:-37774 | None:intergenic |
AGCATATTTGCATGTAGTAT+GGG | 0.525197 | tig0012275:-36124 | None:intergenic |
TTGCATGTTGCTAGAGATAA+CGG | 0.527851 | tig0012275:-27906 | None:intergenic |
GAATATTTGAAACAAAATAG+AGG | 0.535112 | tig0012275:+29270 | Msa1351420:CDS |
TTTCTCGACTCGAGGCTCGA+TGG | 0.546070 | tig0012275:+29349 | Msa1351420:CDS |
CCCTCGTCCAATTCAATGCA+AGG | 0.550879 | tig0012275:+27938 | Msa1351420:CDS |
ATTGAAGGTTGGAATTTAGA+CGG | 0.575521 | tig0012275:-28008 | None:intergenic |
TTCAGACTCTTGAGGCAACA+TGG | 0.578812 | tig0012275:+28435 | Msa1351420:CDS |
TTGGACAATTTCTCGACTCG+AGG | 0.586359 | tig0012275:+29341 | Msa1351420:CDS |
AGATCAACGCAAAGTTCTAA+GGG | 0.587082 | tig0012275:+28230 | Msa1351420:CDS |
AAGAACTAAAGTGTGCATCA+AGG | 0.590523 | tig0012275:+29466 | Msa1351420:CDS |
AGTTTATTGATGTATTGCAA+AGG | 0.602279 | tig0012275:+28304 | Msa1351420:CDS |
GAAGAGCTCAAGTTCTTCCA+GGG | 0.609664 | tig0012275:-35960 | None:intergenic |
GTAGTATGGGAGAGAATCCA+AGG | 0.610000 | tig0012275:-36111 | None:intergenic |
GCCTTGCATTGAATTGGACG+AGG | 0.610175 | tig0012275:-27939 | None:intergenic |
CATGCAAATATGCTTTCATG+CGG | 0.630142 | tig0012275:+36133 | Msa1351420:CDS |
GAGTCTGAACTTGAGTGCTG+TGG | 0.633446 | tig0012275:-28421 | None:intergenic |
ATGTTGCTAGAGATAACGGC+CGG | 0.651350 | tig0012275:-27902 | None:intergenic |
CACTCAAGTTCAGACTCTTG+AGG | 0.656354 | tig0012275:+28427 | Msa1351420:CDS |
CCTTGCATTGAATTGGACGA+GGG | 0.668480 | tig0012275:-27938 | None:intergenic |
GTATGATTTGTATGGCACCC+TGG | 0.671543 | tig0012275:+35943 | Msa1351420:CDS |
ATCATACACATCATCAACTG+TGG | 0.683052 | tig0012275:-35927 | None:intergenic |
GACTTATTAGAAGTGACACG+TGG | 0.737197 | tig0012275:-29296 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAAATATTTTTAATAATA+AGG | + | tig0012275:35293-35312 | Msa1351420:intron | 0.0% |
!! | GAATCTTATAAATAAATAAA+TGG | - | tig0012275:28113-28132 | None:intergenic | 10.0% |
!! | TAATTTAATTAAATTAATGC+AGG | + | tig0012275:28194-28213 | Msa1351420:intron | 10.0% |
!! | CTATTAAAAAAAATTAATTG+AGG | - | tig0012275:28580-28599 | None:intergenic | 10.0% |
!!! | ATTAATTCATTTTGATATTT+GGG | - | tig0012275:32399-32418 | None:intergenic | 10.0% |
!!! | AATTAATTCATTTTGATATT+TGG | - | tig0012275:32400-32419 | None:intergenic | 10.0% |
!! | AATATTACATAATATATACA+AGG | + | tig0012275:35041-35060 | Msa1351420:intron | 10.0% |
!! | ATATTACATAATATATACAA+GGG | + | tig0012275:35042-35061 | Msa1351420:intron | 10.0% |
!!! | TTATCAAATAATTTTTTTGA+AGG | + | tig0012275:35498-35517 | Msa1351420:intron | 10.0% |
!!! | TATCAAATAATTTTTTTGAA+GGG | + | tig0012275:35499-35518 | Msa1351420:intron | 10.0% |
!! | AAAAAATATCATTATTTAAC+GGG | - | tig0012275:36009-36028 | None:intergenic | 10.0% |
!!! | TCTATTTTTAATAAGTTTTT+AGG | + | tig0012275:36452-36471 | Msa1351420:intron | 10.0% |
!! | TAAAGAATAATTACTTTATT+AGG | + | tig0012275:36589-36608 | Msa1351420:intron | 10.0% |
!! | TATATATATATATATGTATG+GGG | - | tig0012275:37229-37248 | None:intergenic | 10.0% |
!! | GTATATATATATATATGTAT+GGG | - | tig0012275:37230-37249 | None:intergenic | 10.0% |
!! | TGTATATATATATATATGTA+TGG | - | tig0012275:37231-37250 | None:intergenic | 10.0% |
!!! | AGAACTAAATTTTTTTTGTA+GGG | - | tig0012275:28613-28632 | None:intergenic | 15.0% |
!!! | TAGAACTAAATTTTTTTTGT+AGG | - | tig0012275:28614-28633 | None:intergenic | 15.0% |
!!! | AAATTTTCGAAAGATTTTTT+TGG | + | tig0012275:28683-28702 | Msa1351420:intron | 15.0% |
!! | AAGATAAAAGTAATAAAATC+TGG | + | tig0012275:28804-28823 | Msa1351420:intron | 15.0% |
!!! | AAGTAAAGATTTAACTTTAA+AGG | + | tig0012275:29010-29029 | Msa1351420:intron | 15.0% |
!! | TATATTGATGAATAAATCAT+AGG | + | tig0012275:29598-29617 | Msa1351420:intron | 15.0% |
!! | CATTTCAAAATTAAAGATTT+GGG | - | tig0012275:30634-30653 | None:intergenic | 15.0% |
!! | ACATTTCAAAATTAAAGATT+TGG | - | tig0012275:30635-30654 | None:intergenic | 15.0% |
!!! | GTTTAAAACCAAAATTAATA+AGG | + | tig0012275:30791-30810 | Msa1351420:intron | 15.0% |
!! | TTGTTAAATAAAATTTCATG+AGG | + | tig0012275:31942-31961 | Msa1351420:intron | 15.0% |
!!! | TTAATTCATTTTGATATTTG+GGG | - | tig0012275:32398-32417 | None:intergenic | 15.0% |
!! | GTATCTAAATAATTAAACTT+TGG | + | tig0012275:32524-32543 | Msa1351420:intron | 15.0% |
!! | TATATTGATGAATAAATCAT+AGG | + | tig0012275:29598-29617 | Msa1351420:intron | 15.0% |
!! | AATAAAAATCTAATTTGAGA+CGG | - | tig0012275:34305-34324 | None:intergenic | 15.0% |
!! | GATTGAAAAACAATTAATAA+TGG | + | tig0012275:34615-34634 | Msa1351420:intron | 15.0% |
!!! | ATTTTTACTTATAAATGAGA+CGG | - | tig0012275:34755-34774 | None:intergenic | 15.0% |
!!! | ATTATTATTTTTTGTTCAAG+TGG | - | tig0012275:35259-35278 | None:intergenic | 15.0% |
!! | TTTAAGCACAAAAAATATAA+AGG | - | tig0012275:35336-35355 | None:intergenic | 15.0% |
!!! | TAAAAATTTGAGTTTTCTTT+TGG | + | tig0012275:35577-35596 | Msa1351420:intron | 15.0% |
!!! | AAAAATTTGAGTTTTCTTTT+GGG | + | tig0012275:35578-35597 | Msa1351420:intron | 15.0% |
!! | AAGAGAAAATTCAAATAAAA+AGG | - | tig0012275:36039-36058 | None:intergenic | 15.0% |
!!! | ATTATCTCTATATATTTTGA+AGG | + | tig0012275:36282-36301 | Msa1351420:intron | 15.0% |
!!! | TTATCTCTATATATTTTGAA+GGG | + | tig0012275:36283-36302 | Msa1351420:intron | 15.0% |
!! | AACATTATTATACTTAATAG+TGG | + | tig0012275:36655-36674 | Msa1351420:intron | 15.0% |
!! | TATATAGAGAAATTCTAATA+TGG | + | tig0012275:37396-37415 | Msa1351420:intron | 15.0% |
!!! | ATAATGCATTTATTTAACTT+TGG | - | tig0012275:37707-37726 | None:intergenic | 15.0% |
!! | TACTTTATATTCACTACTTA+AGG | - | tig0012275:28057-28076 | None:intergenic | 20.0% |
!!! | ACCATTTTAACAAAGAAATT+AGG | + | tig0012275:28340-28359 | Msa1351420:CDS | 20.0% |
!!! | CCATTTTAACAAAGAAATTA+GGG | + | tig0012275:28341-28360 | Msa1351420:CDS | 20.0% |
!! | TTCGAAAATTTAAGAGTTTA+AGG | - | tig0012275:28674-28693 | None:intergenic | 20.0% |
!!! | AATTTTGCGATAATTTTTTG+TGG | + | tig0012275:28839-28858 | Msa1351420:intron | 20.0% |
!!! | TTTAAAGGTCTCAATTTTAT+AGG | + | tig0012275:29025-29044 | Msa1351420:intron | 20.0% |
!!! | TTAAAGGTCTCAATTTTATA+GGG | + | tig0012275:29026-29045 | Msa1351420:intron | 20.0% |
!!! | GAAGTATGTAATTTTAAGAA+AGG | + | tig0012275:29135-29154 | Msa1351420:intron | 20.0% |
!!! | ATATTCTTTGAGAAAATTTG+TGG | - | tig0012275:29256-29275 | None:intergenic | 20.0% |
!!! | GAATATTTGAAACAAAATAG+AGG | + | tig0012275:29270-29289 | Msa1351420:CDS | 20.0% |
!! | CATTAATATATACGAAAAAC+AGG | + | tig0012275:29374-29393 | Msa1351420:CDS | 20.0% |
!!! | AAAACTTATTAGTTTGGTTA+AGG | - | tig0012275:30671-30690 | None:intergenic | 20.0% |
!!! | TTAACCAAACTAATAAGTTT+TGG | + | tig0012275:30670-30689 | Msa1351420:intron | 20.0% |
!!! | TAACCAAACTAATAAGTTTT+GGG | + | tig0012275:30671-30690 | Msa1351420:intron | 20.0% |
!! | AAAATTAAACGAAATTCTGA+CGG | - | tig0012275:31138-31157 | None:intergenic | 20.0% |
!! | TAAAGAATACCAGAATTATT+TGG | + | tig0012275:31384-31403 | Msa1351420:intron | 20.0% |
!!! | CGTGAATTTTTAACAAATTT+AGG | - | tig0012275:32164-32183 | None:intergenic | 20.0% |
!!! | TAATTCATTTTGATATTTGG+GGG | - | tig0012275:32397-32416 | None:intergenic | 20.0% |
!!! | TTAGCTTAGATTTTGATTTA+TGG | - | tig0012275:32586-32605 | None:intergenic | 20.0% |
!! | ATCAAAATCTAAGCTAATTA+AGG | + | tig0012275:32589-32608 | Msa1351420:intron | 20.0% |
!! | ATCTTTAGATAACTTACTAA+TGG | + | tig0012275:32748-32767 | Msa1351420:intron | 20.0% |
!! | CAAATGGAACAATAATAATT+GGG | + | tig0012275:33289-33308 | Msa1351420:intron | 20.0% |
!!! | ATAATAATTGGGTTTTGAAT+TGG | + | tig0012275:33300-33319 | Msa1351420:intron | 20.0% |
!!! | AATAAAACCAAGTTTGTTTT+TGG | + | tig0012275:33888-33907 | Msa1351420:intron | 20.0% |
!! | AAATGATTAGCAATGTTAAT+TGG | + | tig0012275:34350-34369 | Msa1351420:intron | 20.0% |
!! | AATGATTAGCAATGTTAATT+GGG | + | tig0012275:34351-34370 | Msa1351420:intron | 20.0% |
!!! | TTTTTACTTATAAATGAGAC+GGG | - | tig0012275:34754-34773 | None:intergenic | 20.0% |
!! | TTGAAAGTAACATTATTGAA+AGG | + | tig0012275:34893-34912 | Msa1351420:intron | 20.0% |
!!! | ACCAAACTAAGATATTTTTA+TGG | + | tig0012275:35528-35547 | Msa1351420:intron | 20.0% |
!! | TCCATAAAAATATCTTAGTT+TGG | - | tig0012275:35532-35551 | None:intergenic | 20.0% |
!! | CAAATTATTAGTAGAAAGTA+TGG | - | tig0012275:35738-35757 | None:intergenic | 20.0% |
!!! | ATTTTTTCTTCATTTTCAGA+TGG | + | tig0012275:35762-35781 | Msa1351420:intron | 20.0% |
!! | GAAATTATCAATATTGTGTT+TGG | + | tig0012275:36065-36084 | Msa1351420:intron | 20.0% |
!! | TTAAAATAGAAGTTTGGTAT+TGG | - | tig0012275:36393-36412 | None:intergenic | 20.0% |
!!! | AAAGGTTTAAAATAGAAGTT+TGG | - | tig0012275:36399-36418 | None:intergenic | 20.0% |
!!! | TACCTTCTAAAAAAATAAGT+GGG | - | tig0012275:37106-37125 | None:intergenic | 20.0% |
!!! | ATACCTTCTAAAAAAATAAG+TGG | - | tig0012275:37107-37126 | None:intergenic | 20.0% |
! | TAAGGACTGAATATAATCAT+TGG | - | tig0012275:28039-28058 | None:intergenic | 25.0% |
! | TTAATGCAGGAAGAAATTTA+CGG | + | tig0012275:28207-28226 | Msa1351420:intron | 25.0% |
! | AGTTTATTGATGTATTGCAA+AGG | + | tig0012275:28304-28323 | Msa1351420:CDS | 25.0% |
! | CCCTAATTTCTTTGTTAAAA+TGG | - | tig0012275:28344-28363 | None:intergenic | 25.0% |
!!! | TAGTAGTCTTTGATTGATTT+TGG | - | tig0012275:28557-28576 | None:intergenic | 25.0% |
!!! | AAACAAACTTTGTTTTAGCA+GGG | - | tig0012275:28645-28664 | None:intergenic | 25.0% |
!!! | TAAACAAACTTTGTTTTAGC+AGG | - | tig0012275:28646-28665 | None:intergenic | 25.0% |
! | GTTTGAAGATGAAACTATAT+TGG | + | tig0012275:29212-29231 | Msa1351420:intron | 25.0% |
!! | AAGTTGTCATTTACATTAAG+TGG | + | tig0012275:29496-29515 | Msa1351420:intron | 25.0% |
! | AACAGAAAAACCAAACTAAA+AGG | + | tig0012275:29642-29661 | Msa1351420:intron | 25.0% |
! | TAATTGATAGGAACAATAAG+AGG | + | tig0012275:29695-29714 | Msa1351420:intron | 25.0% |
! | TCCCAAAAAAATACTATAAC+CGG | + | tig0012275:30168-30187 | Msa1351420:intron | 25.0% |
!!! | TCCGGTTATAGTATTTTTTT+GGG | - | tig0012275:30172-30191 | None:intergenic | 25.0% |
!! | AATTGACTTAAAATGTTGAC+TGG | + | tig0012275:30358-30377 | Msa1351420:intron | 25.0% |
!! | ATTGACTTAAAATGTTGACT+GGG | + | tig0012275:30359-30378 | Msa1351420:intron | 25.0% |
!! | GGAAGATTAAAGTTCTTTTT+GGG | - | tig0012275:30613-30632 | None:intergenic | 25.0% |
! | AGAACTTTGAATACCAATTT+CGG | + | tig0012275:30821-30840 | Msa1351420:intron | 25.0% |
! | AGAAAAACGATGATAAGATA+AGG | + | tig0012275:31347-31366 | Msa1351420:intron | 25.0% |
! | AAATCACCCCAAAAATTTAA+TGG | + | tig0012275:32026-32045 | Msa1351420:intron | 25.0% |
!! | AACTTGCCATTAAATTTTTG+GGG | - | tig0012275:32035-32054 | None:intergenic | 25.0% |
!! | CAACTTGCCATTAAATTTTT+GGG | - | tig0012275:32036-32055 | None:intergenic | 25.0% |
! | CAAAAAATTCAATCTGACAA+TGG | - | tig0012275:32212-32231 | None:intergenic | 25.0% |
!!! | CATTGTCAGATTGAATTTTT+TGG | + | tig0012275:32210-32229 | Msa1351420:intron | 25.0% |
! | TCAACCAACTTAAAGAAATA+AGG | + | tig0012275:32254-32273 | Msa1351420:intron | 25.0% |
! | CAACCAACTTAAAGAAATAA+GGG | + | tig0012275:32255-32274 | Msa1351420:intron | 25.0% |
!!! | TGCTAAATTTTTTCTAACTG+TGG | - | tig0012275:32348-32367 | None:intergenic | 25.0% |
! | TATACTAAAAATCACTCTTC+AGG | - | tig0012275:32371-32390 | None:intergenic | 25.0% |
!!! | GAAGAGTGATTTTTAGTATA+AGG | + | tig0012275:32371-32390 | Msa1351420:intron | 25.0% |
!! | TTAAACTTTGGAGATAAAGT+TGG | + | tig0012275:32536-32555 | Msa1351420:intron | 25.0% |
!! | TAAACTTTGGAGATAAAGTT+GGG | + | tig0012275:32537-32556 | Msa1351420:intron | 25.0% |
! | TATCTAAAGATACTAACTCT+TGG | - | tig0012275:32739-32758 | None:intergenic | 25.0% |
!! | ATAACTTACTAATGGACAAA+AGG | + | tig0012275:32756-32775 | Msa1351420:intron | 25.0% |
! | GTTTAAAAGAAGAAAAACAG+CGG | + | tig0012275:32984-33003 | Msa1351420:intron | 25.0% |
! | TTATTATTGTTCCATTTGCA+AGG | - | tig0012275:33287-33306 | None:intergenic | 25.0% |
! | GCAAATGGAACAATAATAAT+TGG | + | tig0012275:33288-33307 | Msa1351420:intron | 25.0% |
! | AACAATCAAATTCCTCAAAA+GGG | - | tig0012275:33327-33346 | None:intergenic | 25.0% |
! | TAAGAAAAGTGAATATGCTT+TGG | + | tig0012275:33417-33436 | Msa1351420:intron | 25.0% |
! | AAGAAAAGTGAATATGCTTT+GGG | + | tig0012275:33418-33437 | Msa1351420:intron | 25.0% |
!! | TATCTTATGGATTTTCTACA+GGG | - | tig0012275:33508-33527 | None:intergenic | 25.0% |
!! | ATATCTTATGGATTTTCTAC+AGG | - | tig0012275:33509-33528 | None:intergenic | 25.0% |
! | ATAATAAGTCGCAATAGATT+TGG | + | tig0012275:33630-33649 | Msa1351420:intron | 25.0% |
!!! | AACAAACTTGGTTTTATTGA+TGG | - | tig0012275:33886-33905 | None:intergenic | 25.0% |
!!! | TATTTTTTTTCCCACACAAA+TGG | - | tig0012275:34043-34062 | None:intergenic | 25.0% |
! | ATTTGTGTGGGAAAAAAAAT+AGG | + | tig0012275:34042-34061 | Msa1351420:intron | 25.0% |
! | AAAAAAATAGGAACGAAGTT+AGG | + | tig0012275:34054-34073 | Msa1351420:intron | 25.0% |
! | AACAGAAAAACCAAACTAAA+AGG | + | tig0012275:29642-29661 | Msa1351420:intron | 25.0% |
! | TAATTGATAGGAACAATAAG+AGG | + | tig0012275:29695-29714 | Msa1351420:intron | 25.0% |
!! | TTTTACTTATAAATGAGACG+GGG | - | tig0012275:34753-34772 | None:intergenic | 25.0% |
! | TATTTGCTTTCAATTTGCAA+TGG | - | tig0012275:35196-35215 | None:intergenic | 25.0% |
!!! | GTGGACATAATTTTTGTTAT+GGG | - | tig0012275:35240-35259 | None:intergenic | 25.0% |
!! | AGTGGACATAATTTTTGTTA+TGG | - | tig0012275:35241-35260 | None:intergenic | 25.0% |
!! | TCAAAAAACAAAGGACTTTT+GGG | - | tig0012275:35657-35676 | None:intergenic | 25.0% |
! | CTTCATTTCTCAAAAAACAA+AGG | - | tig0012275:35666-35685 | None:intergenic | 25.0% |
!!! | TTGTTTTTTGAGAAATGAAG+TGG | + | tig0012275:35666-35685 | Msa1351420:intron | 25.0% |
! | ATTCTGAATTGTTCAAAATC+TGG | - | tig0012275:35878-35897 | None:intergenic | 25.0% |
!! | GATTTTGAACAATTCAGAAT+TGG | + | tig0012275:35878-35897 | Msa1351420:CDS | 25.0% |
!! | ACCTTCTAAAAAAATAAGTG+GGG | - | tig0012275:37105-37124 | None:intergenic | 25.0% |
! | AGTTGTTAAATACACCTTAA+GGG | - | tig0012275:37145-37164 | None:intergenic | 25.0% |
! | AAGTTGTTAAATACACCTTA+AGG | - | tig0012275:37146-37165 | None:intergenic | 25.0% |
! | ACACCTTAATAAAATCTAGT+GGG | + | tig0012275:37189-37208 | Msa1351420:intron | 25.0% |
! | ATATATATATATACACCCTC+CGG | + | tig0012275:37236-37255 | Msa1351420:intron | 25.0% |
!! | TTTTTGCTTATATTAGTGAC+CGG | - | tig0012275:37365-37384 | None:intergenic | 25.0% |
! | TATAAGCAAAAATCCACTTT+AGG | + | tig0012275:37266-37285 | Msa1351420:intron | 25.0% |
! | TTAATTGAATGAACCTAAAG+TGG | - | tig0012275:37282-37301 | None:intergenic | 25.0% |
!!! | ATGACCAAATAAAAAGTGTT+TGG | + | tig0012275:37423-37442 | Msa1351420:intron | 25.0% |
!! | ATATACGAGGTATTCTTATA+TGG | - | tig0012275:37573-37592 | None:intergenic | 25.0% |
! | GTTTAGTTGTATACTTCAAA+AGG | - | tig0012275:37616-37635 | None:intergenic | 25.0% |
ATTGAAGGTTGGAATTTAGA+CGG | - | tig0012275:28011-28030 | None:intergenic | 30.0% | |
CTAAATTCCAACCTTCAATT+TGG | + | tig0012275:28012-28031 | Msa1351420:CDS | 30.0% | |
TAATCATTGGTCCAAATTGA+AGG | - | tig0012275:28026-28045 | None:intergenic | 30.0% | |
TACAAAGTAACTTACTACCA+AGG | - | tig0012275:28150-28169 | None:intergenic | 30.0% | |
ATTGATGTATTGCAAAGGAT+TGG | + | tig0012275:28309-28328 | Msa1351420:CDS | 30.0% | |
CAAAGAAATTAGGGACATAT+TGG | + | tig0012275:28350-28369 | Msa1351420:CDS | 30.0% | |
! | CATGTTTAGAACACTATGAA+AGG | + | tig0012275:28707-28726 | Msa1351420:intron | 30.0% |
CTACAAAAAAATGATGCACT+CGG | - | tig0012275:28967-28986 | None:intergenic | 30.0% | |
!!! | GAGTGCATCATTTTTTTGTA+GGG | + | tig0012275:28966-28985 | Msa1351420:intron | 30.0% |
ACTTCTAATAAGTCATGCTT+TGG | + | tig0012275:29305-29324 | Msa1351420:CDS | 30.0% | |
TTTACTCCAATTCGCTAAAT+TGG | + | tig0012275:29413-29432 | Msa1351420:CDS | 30.0% | |
TGAAATCCAATTTAGCGAAT+TGG | - | tig0012275:29422-29441 | None:intergenic | 30.0% | |
!! | AGTTTAGCTTCCTTTTAGTT+TGG | - | tig0012275:29655-29674 | None:intergenic | 30.0% |
AGGAAGCTAAACTAATGTAT+AGG | + | tig0012275:29662-29681 | Msa1351420:intron | 30.0% | |
GGAAAGCTAAACTAATTGAT+AGG | + | tig0012275:29683-29702 | Msa1351420:intron | 30.0% | |
TAAATTTGAAAGTCCCATCT+TGG | + | tig0012275:29784-29803 | Msa1351420:intron | 30.0% | |
!!! | GTCCTGATGAAATTTTTTCA+CGG | + | tig0012275:29897-29916 | Msa1351420:intron | 30.0% |
ATCCGTGAAAAAATTTCATC+AGG | - | tig0012275:29902-29921 | None:intergenic | 30.0% | |
ATACCACATGTGAAATTACT+TGG | - | tig0012275:30066-30085 | None:intergenic | 30.0% | |
AGTAATTTCACATGTGGTAT+TGG | + | tig0012275:30066-30085 | Msa1351420:intron | 30.0% | |
!!! | CTCCGGTTATAGTATTTTTT+TGG | - | tig0012275:30173-30192 | None:intergenic | 30.0% |
CAAAAAAATACTATAACCGG+AGG | + | tig0012275:30171-30190 | Msa1351420:intron | 30.0% | |
AGCTTATTGTGATTCAGATT+GGG | - | tig0012275:30224-30243 | None:intergenic | 30.0% | |
AAGCTTATTGTGATTCAGAT+TGG | - | tig0012275:30225-30244 | None:intergenic | 30.0% | |
AGAGATAAATCTGAGTTTGA+AGG | + | tig0012275:30247-30266 | Msa1351420:intron | 30.0% | |
!!! | AATTTCAGGTTTTGTTCCAT+TGG | + | tig0012275:30481-30500 | Msa1351420:intron | 30.0% |
AGTTAAAAAAATGCCTTGAC+TGG | + | tig0012275:30570-30589 | Msa1351420:intron | 30.0% | |
! | GGGAAGATTAAAGTTCTTTT+TGG | - | tig0012275:30614-30633 | None:intergenic | 30.0% |
AGACCCAAAACTTATTAGTT+TGG | - | tig0012275:30677-30696 | None:intergenic | 30.0% | |
!! | TCTGAGGTCCTTATTAATTT+TGG | - | tig0012275:30802-30821 | None:intergenic | 30.0% |
GAACTTTGAATACCAATTTC+GGG | + | tig0012275:30822-30841 | Msa1351420:intron | 30.0% | |
AAGCTACAAAAGTCCTTATA+TGG | - | tig0012275:30862-30881 | None:intergenic | 30.0% | |
!! | TGTTTTTATGCAATTACCTC+CGG | - | tig0012275:30917-30936 | None:intergenic | 30.0% |
!!! | GTGAATAACGCTTTTTTACA+CGG | - | tig0012275:30955-30974 | None:intergenic | 30.0% |
!! | GTTTAATTTTGAAGACCCAT+CGG | + | tig0012275:31148-31167 | Msa1351420:intron | 30.0% |
! | AAGCTAAAAATTTTCCGGAA+TGG | - | tig0012275:31266-31285 | None:intergenic | 30.0% |
!!! | CTCTGAAGCTAAAAATTTTC+CGG | - | tig0012275:31271-31290 | None:intergenic | 30.0% |
TAAGATAAGGAGTTAGAAAG+AGG | + | tig0012275:31360-31379 | Msa1351420:intron | 30.0% | |
! | TTTTATAGCCTTTTTGACCA+TGG | + | tig0012275:31805-31824 | Msa1351420:intron | 30.0% |
! | TTTATAGCCTTTTTGACCAT+GGG | + | tig0012275:31806-31825 | Msa1351420:intron | 30.0% |
! | CCAACTTGCCATTAAATTTT+TGG | - | tig0012275:32037-32056 | None:intergenic | 30.0% |
CCAAAAATTTAATGGCAAGT+TGG | + | tig0012275:32034-32053 | Msa1351420:intron | 30.0% | |
! | CATCCCTTATTTCTTTAAGT+TGG | - | tig0012275:32261-32280 | None:intergenic | 30.0% |
! | AAACTTTGGAGATAAAGTTG+GGG | + | tig0012275:32538-32557 | Msa1351420:intron | 30.0% |
!!! | TAGATTTTGATTTATGGCAC+TGG | - | tig0012275:32580-32599 | None:intergenic | 30.0% |
! | ATTTGTTGAAGAATTGTCCA+AGG | + | tig0012275:32625-32644 | Msa1351420:intron | 30.0% |
AAAAGGTTAAAGTGAAAGGA+AGG | + | tig0012275:32773-32792 | Msa1351420:intron | 30.0% | |
! | TTTTGAATTACAAGACCAGA+AGG | + | tig0012275:32809-32828 | Msa1351420:intron | 30.0% |
AACAAATGGAACCAATATGA+TGG | + | tig0012275:32834-32853 | Msa1351420:intron | 30.0% | |
ACTGAAGCAAGTTTATTATC+AGG | + | tig0012275:32857-32876 | Msa1351420:intron | 30.0% | |
TGTATGATTGAAAAAGTGAG+AGG | + | tig0012275:32906-32925 | Msa1351420:intron | 30.0% | |
ACCAGAATCTAATATCCATA+CGG | + | tig0012275:32952-32971 | Msa1351420:intron | 30.0% | |
TCTTGGTGGAAACATAATAT+TGG | - | tig0012275:33217-33236 | None:intergenic | 30.0% | |
ATATTATGTTTCCACCAAGA+AGG | + | tig0012275:33217-33236 | Msa1351420:intron | 30.0% | |
CAACAATCAAATTCCTCAAA+AGG | - | tig0012275:33328-33347 | None:intergenic | 30.0% | |
GTATGCTACTGAATATCTTA+TGG | - | tig0012275:33521-33540 | None:intergenic | 30.0% | |
TTTGAGTAAAACGAGTAAGA+AGG | + | tig0012275:33710-33729 | Msa1351420:intron | 30.0% | |
AATAAGGTGATGAAGAATCA+AGG | + | tig0012275:34013-34032 | Msa1351420:intron | 30.0% | |
ATAAGGTGATGAAGAATCAA+GGG | + | tig0012275:34014-34033 | Msa1351420:intron | 30.0% | |
CTCTACATACTTTCTTTACA+TGG | - | tig0012275:34086-34105 | None:intergenic | 30.0% | |
!! | AGTTTAGCTTCCTTTTAGTT+TGG | - | tig0012275:29655-29674 | None:intergenic | 30.0% |
AGGAAGCTAAACTAATGTAT+AGG | + | tig0012275:29662-29681 | Msa1351420:intron | 30.0% | |
GGAAAGCTAAACTAATTGAT+AGG | + | tig0012275:29683-29702 | Msa1351420:intron | 30.0% | |
! | GTTGTATTGCTATTGTTAGA+GGG | + | tig0012275:34664-34683 | Msa1351420:intron | 30.0% |
CATAATATATACAAGGGACA+TGG | + | tig0012275:35048-35067 | Msa1351420:intron | 30.0% | |
ATGTTAGAGAAGAGAATAAG+TGG | - | tig0012275:35091-35110 | None:intergenic | 30.0% | |
!! | GACATAATTTTTGTTATGGG+AGG | - | tig0012275:35237-35256 | None:intergenic | 30.0% |
!!! | TTTCTTATTTTGTGCCCTAA+GGG | + | tig0012275:35601-35620 | Msa1351420:intron | 30.0% |
! | CTCAAAAAACAAAGGACTTT+TGG | - | tig0012275:35658-35677 | None:intergenic | 30.0% |
! | TTTTCTTCATTTTCAGATGG+TGG | + | tig0012275:35765-35784 | Msa1351420:intron | 30.0% |
GAATTGTTGAGAACTTTGTT+TGG | + | tig0012275:35831-35850 | Msa1351420:CDS | 30.0% | |
ATCATCAACTGTGGTAATTA+AGG | - | tig0012275:35921-35940 | None:intergenic | 30.0% | |
! | GATGATGTGTATGATTTGTA+TGG | + | tig0012275:35935-35954 | Msa1351420:CDS | 30.0% |
AGCATATTTGCATGTAGTAT+GGG | - | tig0012275:36127-36146 | None:intergenic | 30.0% | |
AAGCATATTTGCATGTAGTA+TGG | - | tig0012275:36128-36147 | None:intergenic | 30.0% | |
GTTACTAAACAATACCCTAA+GGG | - | tig0012275:36501-36520 | None:intergenic | 30.0% | |
AGTTACTAAACAATACCCTA+AGG | - | tig0012275:36502-36521 | None:intergenic | 30.0% | |
AATCCTTAAAGAGTTCCATT+AGG | + | tig0012275:36612-36631 | Msa1351420:intron | 30.0% | |
ATCCTTAAAGAGTTCCATTA+GGG | + | tig0012275:36613-36632 | Msa1351420:intron | 30.0% | |
CATATTTGATAGAAGCAAAG+TGG | + | tig0012275:36694-36713 | Msa1351420:intron | 30.0% | |
ATTTGCCATGTATTCTTCAA+CGG | - | tig0012275:36742-36761 | None:intergenic | 30.0% | |
TTGAAGAATACATGGCAAAT+GGG | + | tig0012275:36742-36761 | Msa1351420:intron | 30.0% | |
ACACCTTCGAAAAAATAAGT+GGG | + | tig0012275:37040-37059 | Msa1351420:intron | 30.0% | |
!!! | ACCCCACTTATTTTTTTAGA+AGG | + | tig0012275:37101-37120 | Msa1351420:intron | 30.0% |
GTTGTTAAATACACCTTAAG+GGG | - | tig0012275:37144-37163 | None:intergenic | 30.0% | |
CACACCTTAATAAAATCTAG+TGG | + | tig0012275:37188-37207 | Msa1351420:intron | 30.0% | |
! | ACACCCACTAGATTTTATTA+AGG | - | tig0012275:37195-37214 | None:intergenic | 30.0% |
!! | GTGACCAAACACTTTTTATT+TGG | - | tig0012275:37430-37449 | None:intergenic | 30.0% |
AACACACACACATAAAAAGA+TGG | - | tig0012275:37524-37543 | None:intergenic | 30.0% | |
! | GTGTTCAAACACTATTGATT+TGG | + | tig0012275:37539-37558 | Msa1351420:intron | 30.0% |
CATCGTATCATATATATACG+AGG | - | tig0012275:37586-37605 | None:intergenic | 30.0% | |
TTAAAGAGTGAAAATGAGAC+AGG | + | tig0012275:37674-37693 | Msa1351420:intron | 30.0% | |
AAATGCATTATGAACGAAAC+TGG | + | tig0012275:37716-37735 | Msa1351420:CDS | 30.0% | |
TTGCATGTTGCTAGAGATAA+CGG | - | tig0012275:27909-27928 | None:intergenic | 35.0% | |
TATGATGCCTTGCATTGAAT+TGG | - | tig0012275:27948-27967 | None:intergenic | 35.0% | |
TTCAAGCAATTACTAGTCCT+TGG | + | tig0012275:28130-28149 | Msa1351420:intron | 35.0% | |
! | AGATCAACGCAAAGTTCTAA+GGG | + | tig0012275:28230-28249 | Msa1351420:CDS | 35.0% |
CATGGTTATGAGATATCTAC+AGG | + | tig0012275:28453-28472 | Msa1351420:intron | 35.0% | |
!!! | CGAGTGCATCATTTTTTTGT+AGG | + | tig0012275:28965-28984 | Msa1351420:intron | 35.0% |
CTTTGGATCTTCCATTGAAT+TGG | + | tig0012275:29322-29341 | Msa1351420:CDS | 35.0% | |
CGAGAAATTGTCCAATTCAA+TGG | - | tig0012275:29336-29355 | None:intergenic | 35.0% | |
!! | ATGCACACTTTAGTTCTTCT+AGG | - | tig0012275:29464-29483 | None:intergenic | 35.0% |
AAGAACTAAAGTGTGCATCA+AGG | + | tig0012275:29466-29485 | Msa1351420:CDS | 35.0% | |
ACAGGAGACAGTATCAATTA+AGG | - | tig0012275:29532-29551 | None:intergenic | 35.0% | |
TCTCTGCATACTTTCTTTAC+AGG | - | tig0012275:29550-29569 | None:intergenic | 35.0% | |
ATAAGAGGATGAGAACAACA+AGG | + | tig0012275:29710-29729 | Msa1351420:intron | 35.0% | |
ATTTACACAACCCATCTTGA+GGG | - | tig0012275:29769-29788 | None:intergenic | 35.0% | |
AATTTACACAACCCATCTTG+AGG | - | tig0012275:29770-29789 | None:intergenic | 35.0% | |
ATGCAATATGTAGAGCAGAT+TGG | + | tig0012275:29975-29994 | Msa1351420:intron | 35.0% | |
! | TCATACTTGTTGAGTGACAT+TGG | - | tig0012275:30040-30059 | None:intergenic | 35.0% |
GAAAACAAAGAAACAGTCTG+TGG | - | tig0012275:30131-30150 | None:intergenic | 35.0% | |
!!! | AGACTGTTTCTTTGTTTTCC+AGG | + | tig0012275:30132-30151 | Msa1351420:intron | 35.0% |
TTGTCTTTAGGTAACGAAGA+AGG | + | tig0012275:30293-30312 | Msa1351420:intron | 35.0% | |
CTGAAATTAACTCCTTCAGA+AGG | - | tig0012275:30469-30488 | None:intergenic | 35.0% | |
! | CTTCTGAAGGAGTTAATTTC+AGG | + | tig0012275:30467-30486 | Msa1351420:intron | 35.0% |
!!! | AATAAGTTTTGGGTCTGATC+CGG | + | tig0012275:30681-30700 | Msa1351420:intron | 35.0% |
!! | GTTGATGACATTGTACTTAC+CGG | - | tig0012275:30703-30722 | None:intergenic | 35.0% |
! | TTTTGCTTACATCGTGAATC+TGG | - | tig0012275:30748-30767 | None:intergenic | 35.0% |
TTGGTATTCAAAGTTCTCTG+AGG | - | tig0012275:30818-30837 | None:intergenic | 35.0% | |
! | GGCTTGTTTAAGACCATATA+AGG | + | tig0012275:30846-30865 | Msa1351420:intron | 35.0% |
! | GTTTTTATGCAATTACCTCC+GGG | - | tig0012275:30916-30935 | None:intergenic | 35.0% |
ACTGTAACAAGTTTAGCAAC+AGG | + | tig0012275:31030-31049 | Msa1351420:intron | 35.0% | |
AATAATCAACCCCCTCAATT+TGG | + | tig0012275:31067-31086 | Msa1351420:intron | 35.0% | |
ATAATCAACCCCCTCAATTT+GGG | + | tig0012275:31068-31087 | Msa1351420:intron | 35.0% | |
CTTTGTGTGAAAACAGAACT+TGG | - | tig0012275:31215-31234 | None:intergenic | 35.0% | |
ACCAGAATTATTTGGAGAAG+AGG | + | tig0012275:31392-31411 | Msa1351420:intron | 35.0% | |
TCCTCTTCTCCAAATAATTC+TGG | - | tig0012275:31396-31415 | None:intergenic | 35.0% | |
AGAATTATTTGGAGAAGAGG+AGG | + | tig0012275:31395-31414 | Msa1351420:intron | 35.0% | |
!! | GATTTGCTAAGTGTTGTTCA+AGG | + | tig0012275:31514-31533 | Msa1351420:intron | 35.0% |
ATGTGACTGGAATGTTTGTA+GGG | + | tig0012275:31592-31611 | Msa1351420:intron | 35.0% | |
TGAGCATTAAGCATCTTGTA+TGG | + | tig0012275:31717-31736 | Msa1351420:intron | 35.0% | |
! | TTATAGCCTTTTTGACCATG+GGG | + | tig0012275:31807-31826 | Msa1351420:intron | 35.0% |
!!! | GTTTTTGGTTGCTTGGTATA+TGG | - | tig0012275:31897-31916 | None:intergenic | 35.0% |
! | TAGCCTTTGAGAACATTTGT+AGG | + | tig0012275:31969-31988 | Msa1351420:intron | 35.0% |
CTACCTACAAATGTTCTCAA+AGG | - | tig0012275:31975-31994 | None:intergenic | 35.0% | |
GTTTATACTCCGCAACAAAA+TGG | - | tig0012275:32119-32138 | None:intergenic | 35.0% | |
! | TGATTTTTCTCGAAGTACGT+GGG | - | tig0012275:32321-32340 | None:intergenic | 35.0% |
! | ATGATTTTTCTCGAAGTACG+TGG | - | tig0012275:32322-32341 | None:intergenic | 35.0% |
ACAGTAGAGATGCAACTTAA+TGG | + | tig0012275:32431-32450 | Msa1351420:intron | 35.0% | |
!! | AAACGAGATTGTTTTGCCAA+AGG | + | tig0012275:32461-32480 | Msa1351420:intron | 35.0% |
!! | AACGAGATTGTTTTGCCAAA+GGG | + | tig0012275:32462-32481 | Msa1351420:intron | 35.0% |
ATCTAAGCTAATTAAGGCAG+TGG | + | tig0012275:32595-32614 | Msa1351420:intron | 35.0% | |
TCTAAGCTAATTAAGGCAGT+GGG | + | tig0012275:32596-32615 | Msa1351420:intron | 35.0% | |
ACCTGTAGTAAACATGAAGT+AGG | + | tig0012275:32701-32720 | Msa1351420:intron | 35.0% | |
CCTGTAGTAAACATGAAGTA+GGG | + | tig0012275:32702-32721 | Msa1351420:intron | 35.0% | |
CTGTAGTAAACATGAAGTAG+GGG | + | tig0012275:32703-32722 | Msa1351420:intron | 35.0% | |
GGACAAAAGGTTAAAGTGAA+AGG | + | tig0012275:32769-32788 | Msa1351420:intron | 35.0% | |
AAGACCAGAAGGTAAACAAA+TGG | + | tig0012275:32820-32839 | Msa1351420:intron | 35.0% | |
ATCAGGTAATTTGACAGATG+TGG | + | tig0012275:32874-32893 | Msa1351420:intron | 35.0% | |
TGATTGAAAAAGTGAGAGGT+CGG | + | tig0012275:32910-32929 | Msa1351420:intron | 35.0% | |
TCCGTATGGATATTAGATTC+TGG | - | tig0012275:32956-32975 | None:intergenic | 35.0% | |
AATATCCATACGGATGTACA+AGG | + | tig0012275:32962-32981 | Msa1351420:intron | 35.0% | |
TTAAACCTTGTACATCCGTA+TGG | - | tig0012275:32970-32989 | None:intergenic | 35.0% | |
! | GTCGATCATTACCATTTTGA+AGG | + | tig0012275:33035-33054 | Msa1351420:intron | 35.0% |
CTACTTTCTCTCCTTCAAAA+TGG | - | tig0012275:33049-33068 | None:intergenic | 35.0% | |
! | CAAAGATTGGTTATCCTTCT+TGG | - | tig0012275:33234-33253 | None:intergenic | 35.0% |
! | TTTTGAATTGGTCCCTTTTG+AGG | + | tig0012275:33312-33331 | Msa1351420:intron | 35.0% |
ATTTGATTGTTGAACAGCCA+TGG | + | tig0012275:33336-33355 | Msa1351420:intron | 35.0% | |
AACAGAACGTGAATCAGATA+AGG | + | tig0012275:33375-33394 | Msa1351420:intron | 35.0% | |
GCATACACTTCGTTGAAATT+TGG | + | tig0012275:33535-33554 | Msa1351420:intron | 35.0% | |
TGTCGAATTTCAAAAATGCG+AGG | + | tig0012275:33679-33698 | Msa1351420:intron | 35.0% | |
GTTAATCCATAGGATGGAAT+TGG | + | tig0012275:33756-33775 | Msa1351420:intron | 35.0% | |
TAGAATGGATAAGCCAAGAT+TGG | + | tig0012275:33794-33813 | Msa1351420:intron | 35.0% | |
ATTGGACCATACTGTTACAA+CGG | + | tig0012275:33812-33831 | Msa1351420:intron | 35.0% | |
ACAGTCCAAATTTCTCTCAT+TGG | - | tig0012275:33840-33859 | None:intergenic | 35.0% | |
TGAGAGAAATTTGGACTGTT+AGG | + | tig0012275:33841-33860 | Msa1351420:intron | 35.0% | |
AAATTTGGACTGTTAGGTTC+AGG | + | tig0012275:33847-33866 | Msa1351420:intron | 35.0% | |
CTTGAAGCCAAAAACAAACT+TGG | - | tig0012275:33898-33917 | None:intergenic | 35.0% | |
GCATAGTTATCTCCATTAAG+TGG | + | tig0012275:33946-33965 | Msa1351420:intron | 35.0% | |
TCTGATGAATGGAGGTAATA+AGG | + | tig0012275:33997-34016 | Msa1351420:intron | 35.0% | |
ATAAGAGGATGAGAACAACA+AGG | + | tig0012275:29710-29729 | Msa1351420:intron | 35.0% | |
GAAATGTTAACTAGTGCTCT+CGG | + | tig0012275:34373-34392 | Msa1351420:intron | 35.0% | |
ATCAACATGAGTCTCGTTAA+CGG | - | tig0012275:34527-34546 | None:intergenic | 35.0% | |
! | CGTTGTATTGCTATTGTTAG+AGG | + | tig0012275:34663-34682 | Msa1351420:intron | 35.0% |
AGATGACACCTAATTTGAGA+TGG | + | tig0012275:34718-34737 | Msa1351420:intron | 35.0% | |
TGTGAGTTTAGATCAGTTGA+TGG | + | tig0012275:35017-35036 | Msa1351420:intron | 35.0% | |
!!! | GTTTCTTATTTTGTGCCCTA+AGG | + | tig0012275:35600-35619 | Msa1351420:intron | 35.0% |
!! | CTTTGACTTTTGTTCCAACT+GGG | - | tig0012275:35699-35718 | None:intergenic | 35.0% |
!! | TCTTTGACTTTTGTTCCAAC+TGG | - | tig0012275:35700-35719 | None:intergenic | 35.0% |
GTCAAAGAATTGAGAGAGAT+TGG | + | tig0012275:35712-35731 | Msa1351420:intron | 35.0% | |
TAGAAAAACTGAGCTTTGCT+AGG | + | tig0012275:35804-35823 | Msa1351420:CDS | 35.0% | |
AGAAAAACTGAGCTTTGCTA+GGG | + | tig0012275:35805-35824 | Msa1351420:CDS | 35.0% | |
! | GAGAACTTTGTTTGGAATGT+TGG | + | tig0012275:35839-35858 | Msa1351420:CDS | 35.0% |
ATCATACACATCATCAACTG+TGG | - | tig0012275:35930-35949 | None:intergenic | 35.0% | |
TCTTCACAGAAGCTATTGAT+AGG | + | tig0012275:35978-35997 | Msa1351420:CDS | 35.0% | |
! | TTGTGTTTGGTGATTCTAGA+TGG | + | tig0012275:36078-36097 | Msa1351420:intron | 35.0% |
! | TGTGTTTGGTGATTCTAGAT+GGG | + | tig0012275:36079-36098 | Msa1351420:intron | 35.0% |
CATGCAAATATGCTTTCATG+CGG | + | tig0012275:36133-36152 | Msa1351420:CDS | 35.0% | |
GCAACTTTGCACATGTTAAA+AGG | - | tig0012275:36417-36436 | None:intergenic | 35.0% | |
AAATGTTAACAAGTGCCCTT+AGG | + | tig0012275:36483-36502 | Msa1351420:intron | 35.0% | |
AATGTTAACAAGTGCCCTTA+GGG | + | tig0012275:36484-36503 | Msa1351420:intron | 35.0% | |
GTTGAAGAATACATGGCAAA+TGG | + | tig0012275:36741-36760 | Msa1351420:intron | 35.0% | |
TCTTCCATTTCGATTGAATG+TGG | - | tig0012275:36819-36838 | None:intergenic | 35.0% | |
TTCAATCGAAATGGAAGACT+TGG | + | tig0012275:36821-36840 | Msa1351420:intron | 35.0% | |
ACACACACACAATGTTAAGT+TGG | - | tig0012275:36935-36954 | None:intergenic | 35.0% | |
CACACCTTCGAAAAAATAAG+TGG | + | tig0012275:37039-37058 | Msa1351420:intron | 35.0% | |
!!! | ACACCCACTTATTTTTTCGA+AGG | - | tig0012275:37046-37065 | None:intergenic | 35.0% |
TGTATGTTAGCAACTCCTAT+AGG | - | tig0012275:37082-37101 | None:intergenic | 35.0% | |
! | TTTTAGCAACATTCCCCTTA+AGG | + | tig0012275:37128-37147 | Msa1351420:intron | 35.0% |
! | ATATATGTATGGGGTTTGCT+AGG | - | tig0012275:37220-37239 | None:intergenic | 35.0% |
TGCTTATATTAGTGACGAGA+TGG | + | tig0012275:37369-37388 | Msa1351420:intron | 35.0% | |
ATAATCACGAGCCTCTATTT+CGG | - | tig0012275:37747-37766 | None:intergenic | 35.0% | |
AGTCCATGATGTCTACATTA+TGG | + | tig0012275:37771-37790 | Msa1351420:CDS | 35.0% | |
CTTCCATAATGTAGACATCA+TGG | - | tig0012275:37777-37796 | None:intergenic | 35.0% | |
TGTATGTTCATGTACCAGTA+TGG | + | tig0012275:37872-37891 | Msa1351420:intron | 35.0% | |
!!! | AGGAGAAAGCGTTTTGATCA+AGG | - | tig0012275:27877-27896 | None:intergenic | 40.0% |
AAACGCTTTCTCCTAACAAC+CGG | + | tig0012275:27883-27902 | Msa1351420:CDS | 40.0% | |
CATTGGTCCAAATTGAAGGT+TGG | - | tig0012275:28022-28041 | None:intergenic | 40.0% | |
GAGATCAACGCAAAGTTCTA+AGG | + | tig0012275:28229-28248 | Msa1351420:CDS | 40.0% | |
GGACAGTTTGTAGATGTTCA+TGG | + | tig0012275:29156-29175 | Msa1351420:intron | 40.0% | |
GACTTATTAGAAGTGACACG+TGG | - | tig0012275:29299-29318 | None:intergenic | 40.0% | |
TTTACACAACCCATCTTGAG+GGG | - | tig0012275:29768-29787 | None:intergenic | 40.0% | |
TGAAACTGATCTTTGCCCAA+TGG | + | tig0012275:29818-29837 | Msa1351420:intron | 40.0% | |
CTATGTGTTTAGTACGCTCA+TGG | + | tig0012275:29939-29958 | Msa1351420:intron | 40.0% | |
! | GATTGGTTGTCGCAAAACAA+CGG | + | tig0012275:29992-30011 | Msa1351420:intron | 40.0% |
GAGCCAAGTAATTTCACATG+TGG | + | tig0012275:30060-30079 | Msa1351420:intron | 40.0% | |
TGAAGCAGAATACAGAGCAA+TGG | - | tig0012275:30092-30111 | None:intergenic | 40.0% | |
TCTTTAGGTAACGAAGAAGG+CGG | + | tig0012275:30296-30315 | Msa1351420:intron | 40.0% | |
TGTCTGATCCTTCACCATAT+CGG | - | tig0012275:30438-30457 | None:intergenic | 40.0% | |
TGTTCCATTGGAAAGTCTAC+CGG | + | tig0012275:30493-30512 | Msa1351420:intron | 40.0% | |
CTTGACAACATCTCAGATAG+TGG | - | tig0012275:30535-30554 | None:intergenic | 40.0% | |
GAAGTTGCAAAATCCAGTCA+AGG | - | tig0012275:30586-30605 | None:intergenic | 40.0% | |
CTTTGAATACCAATTTCGGG+AGG | + | tig0012275:30825-30844 | Msa1351420:intron | 40.0% | |
TTAAACAAGCCTCCCGAAAT+TGG | - | tig0012275:30837-30856 | None:intergenic | 40.0% | |
! | TTTACACGGTGATTTGCATG+AGG | - | tig0012275:30941-30960 | None:intergenic | 40.0% |
AAGCGTTATTCACGTCCAAT+TGG | + | tig0012275:30962-30981 | Msa1351420:intron | 40.0% | |
TATTCACGTCCAATTGGTGA+AGG | + | tig0012275:30968-30987 | Msa1351420:intron | 40.0% | |
ATTCACGTCCAATTGGTGAA+GGG | + | tig0012275:30969-30988 | Msa1351420:intron | 40.0% | |
CTATTGCTGCTGCAAAAAAC+TGG | - | tig0012275:30996-31015 | None:intergenic | 40.0% | |
AAGGGATACACCCAAATTGA+GGG | - | tig0012275:31081-31100 | None:intergenic | 40.0% | |
TAAGGGATACACCCAAATTG+AGG | - | tig0012275:31082-31101 | None:intergenic | 40.0% | |
CCTAACGGAAAGAAAGCAAT+TGG | - | tig0012275:31177-31196 | None:intergenic | 40.0% | |
CCAATTGCTTTCTTTCCGTT+AGG | + | tig0012275:31174-31193 | Msa1351420:intron | 40.0% | |
TCCTTAGTTCCTCTACCTAA+CGG | - | tig0012275:31192-31211 | None:intergenic | 40.0% | |
TTAGCTTCAGAGTATGACTG+CGG | + | tig0012275:31279-31298 | Msa1351420:intron | 40.0% | |
! | GAGAGCACACATAATCTTCA+AGG | + | tig0012275:31433-31452 | Msa1351420:intron | 40.0% |
AGCACACATAATCTTCAAGG+TGG | + | tig0012275:31436-31455 | Msa1351420:intron | 40.0% | |
AGTTCCAAGGCTATTTGTGT+TGG | + | tig0012275:31543-31562 | Msa1351420:intron | 40.0% | |
! | CTATTTGTGTTGGTGGAACA+TGG | + | tig0012275:31553-31572 | Msa1351420:intron | 40.0% |
GATGTGACTGGAATGTTTGT+AGG | + | tig0012275:31591-31610 | Msa1351420:intron | 40.0% | |
GGAGATGATGTGTCATCTAT+AGG | + | tig0012275:31660-31679 | Msa1351420:intron | 40.0% | |
GATGATGTGTCATCTATAGG+TGG | + | tig0012275:31663-31682 | Msa1351420:intron | 40.0% | |
TGTGTCATCTATAGGTGGTA+AGG | + | tig0012275:31668-31687 | Msa1351420:intron | 40.0% | |
GTGTCATCTATAGGTGGTAA+GGG | + | tig0012275:31669-31688 | Msa1351420:intron | 40.0% | |
TCTATAGGTGGTAAGGGTAA+AGG | + | tig0012275:31675-31694 | Msa1351420:intron | 40.0% | |
CTATAGGTGGTAAGGGTAAA+GGG | + | tig0012275:31676-31695 | Msa1351420:intron | 40.0% | |
!!! | GTGTTTTTAGGATATCCCCA+TGG | - | tig0012275:31825-31844 | None:intergenic | 40.0% |
GGATATCCTAAAAACACTCC+AGG | + | tig0012275:31828-31847 | Msa1351420:intron | 40.0% | |
TTTGATAAACGTGCATCTCC+TGG | - | tig0012275:31849-31868 | None:intergenic | 40.0% | |
!!! | TCTTCGAGTTTTTGGTTGCT+TGG | - | tig0012275:31904-31923 | None:intergenic | 40.0% |
AGCAACCAAAAACTCGAAGA+TGG | + | tig0012275:31904-31923 | Msa1351420:intron | 40.0% | |
GCAACCAAAAACTCGAAGAT+GGG | + | tig0012275:31905-31924 | Msa1351420:intron | 40.0% | |
!! | CTTTCCCATCTTCGAGTTTT+TGG | - | tig0012275:31912-31931 | None:intergenic | 40.0% |
! | ACTCGAAGATGGGAAAGTTT+TGG | + | tig0012275:31915-31934 | Msa1351420:intron | 40.0% |
! | TCGACAACACCATTTTGTTG+CGG | + | tig0012275:32107-32126 | Msa1351420:intron | 40.0% |
CTAAGCTAATTAAGGCAGTG+GGG | + | tig0012275:32597-32616 | Msa1351420:intron | 40.0% | |
AAGAATTGTCCAAGGTGTAG+AGG | + | tig0012275:32633-32652 | Msa1351420:intron | 40.0% | |
ACGAAGAGGATTACTGTGAT+GGG | - | tig0012275:32674-32693 | None:intergenic | 40.0% | |
CCCTACTTCATGTTTACTAC+AGG | - | tig0012275:32705-32724 | None:intergenic | 40.0% | |
GGTTCCATTTGTTTACCTTC+TGG | - | tig0012275:32827-32846 | None:intergenic | 40.0% | |
CTTGCTTCAGTCCATCATAT+TGG | - | tig0012275:32848-32867 | None:intergenic | 40.0% | |
GTACCTGCAAAATTTGCAAG+AGG | + | tig0012275:33013-33032 | Msa1351420:intron | 40.0% | |
AGTAGCTGTTGAATCTGAGT+TGG | + | tig0012275:33064-33083 | Msa1351420:intron | 40.0% | |
CTAGATGAAGACTGAGAATC+CGG | + | tig0012275:33094-33113 | Msa1351420:intron | 40.0% | |
! | AGATTGGTTATCCTTCTTGG+TGG | - | tig0012275:33231-33250 | None:intergenic | 40.0% |
AGTCGTTGCTACTCAAAGAT+TGG | - | tig0012275:33247-33266 | None:intergenic | 40.0% | |
!! | AATATGCTTTGGGAACCGAA+GGG | + | tig0012275:33428-33447 | Msa1351420:intron | 40.0% |
GAGGATCCATGAGTAGTATT+TGG | + | tig0012275:33452-33471 | Msa1351420:intron | 40.0% | |
TCGTAGCCAAATACTACTCA+TGG | - | tig0012275:33461-33480 | None:intergenic | 40.0% | |
GCCTTGAGAAAGATTTGCAA+TGG | + | tig0012275:33654-33673 | Msa1351420:intron | 40.0% | |
GCCATTGCAAATCTTTCTCA+AGG | - | tig0012275:33658-33677 | None:intergenic | 40.0% | |
TTAACAGTGCTCGGGATATA+TGG | - | tig0012275:33741-33760 | None:intergenic | 40.0% | |
! | TCCTATGGATTAACAGTGCT+CGG | - | tig0012275:33750-33769 | None:intergenic | 40.0% |
AGCACTGTTAATCCATAGGA+TGG | + | tig0012275:33750-33769 | Msa1351420:intron | 40.0% | |
! | CTATGGTGGGAATAGTAGAA+TGG | + | tig0012275:33779-33798 | Msa1351420:intron | 40.0% |
GTAACAGTATGGTCCAATCT+TGG | - | tig0012275:33810-33829 | None:intergenic | 40.0% | |
TTGGATCCGTTGTAACAGTA+TGG | - | tig0012275:33821-33840 | None:intergenic | 40.0% | |
CGGATCCAATGAGAGAAATT+TGG | + | tig0012275:33832-33851 | Msa1351420:intron | 40.0% | |
! | TGTTAGGTTCAGGTTTGAGA+AGG | + | tig0012275:33857-33876 | Msa1351420:intron | 40.0% |
ATGGAGATAACTATGCCACT+TGG | - | tig0012275:33942-33961 | None:intergenic | 40.0% | |
CTTGTCACACAACCACTTAA+TGG | - | tig0012275:33961-33980 | None:intergenic | 40.0% | |
GTGGTTGTGTGACAAGTATT+TGG | + | tig0012275:33965-33984 | Msa1351420:intron | 40.0% | |
! | ACACCTAATTTGAGATGGAG+AGG | + | tig0012275:34723-34742 | Msa1351420:intron | 40.0% |
GTACCTCTCCATCTCAAATT+AGG | - | tig0012275:34729-34748 | None:intergenic | 40.0% | |
CTCTCATAATTGTGCCCTTA+GGG | - | tig0012275:35618-35637 | None:intergenic | 40.0% | |
TCTCTCATAATTGTGCCCTT+AGG | - | tig0012275:35619-35638 | None:intergenic | 40.0% | |
TAGATGGGATTTGAATGCCT+TGG | + | tig0012275:36094-36113 | Msa1351420:intron | 40.0% | |
CTTACTGCTTTCTTCAGGTA+CGG | - | tig0012275:36224-36243 | None:intergenic | 40.0% | |
AGTTGCTTACTGCTTTCTTC+AGG | - | tig0012275:36229-36248 | None:intergenic | 40.0% | |
TGCCCTAATGGAACTCTTTA+AGG | - | tig0012275:36618-36637 | None:intergenic | 40.0% | |
GAAGCAAAGTGGTACTATAG+TGG | + | tig0012275:36705-36724 | Msa1351420:intron | 40.0% | |
TCCAACCGTTGAAGAATACA+TGG | + | tig0012275:36734-36753 | Msa1351420:intron | 40.0% | |
AAATACAGCATGTGCACCTA+TGG | - | tig0012275:36775-36794 | None:intergenic | 40.0% | |
! | TGGCATCGAAAAGTAACCAT+GGG | - | tig0012275:36799-36818 | None:intergenic | 40.0% |
GATGCCACATTCAATCGAAA+TGG | + | tig0012275:36812-36831 | Msa1351420:intron | 40.0% | |
! | ATGGAAGACTTGGTTCGTTT+AGG | + | tig0012275:36831-36850 | Msa1351420:intron | 40.0% |
! | TGGAAGACTTGGTTCGTTTA+GGG | + | tig0012275:36832-36851 | Msa1351420:intron | 40.0% |
GTCATTAGCAACTCTTGCAA+TGG | - | tig0012275:36889-36908 | None:intergenic | 40.0% | |
GCAAGAGTTGCTAATGACTA+CGG | + | tig0012275:36891-36910 | Msa1351420:intron | 40.0% | |
CAAGAGTTGCTAATGACTAC+GGG | + | tig0012275:36892-36911 | Msa1351420:intron | 40.0% | |
GTATCCTAGCAAATGCCTAT+AGG | + | tig0012275:37064-37083 | Msa1351420:intron | 40.0% | |
AACTCCTATAGGCATTTGCT+AGG | - | tig0012275:37071-37090 | None:intergenic | 40.0% | |
TGCTTATATTAGTGACCGGA+GGG | - | tig0012275:37254-37273 | None:intergenic | 40.0% | |
TTGCTTATATTAGTGACCGG+AGG | - | tig0012275:37255-37274 | None:intergenic | 40.0% | |
ACTGGGGGAGAAGCAAATAT+GGG | - | tig0012275:27852-27871 | None:intergenic | 45.0% | |
AACTGGGGGAGAAGCAAATA+TGG | - | tig0012275:27853-27872 | None:intergenic | 45.0% | |
!! | GTTTTGATCAAGGCAACTGG+GGG | - | tig0012275:27867-27886 | None:intergenic | 45.0% |
!! | CGTTTTGATCAAGGCAACTG+GGG | - | tig0012275:27868-27887 | None:intergenic | 45.0% |
!! | GCGTTTTGATCAAGGCAACT+GGG | - | tig0012275:27869-27888 | None:intergenic | 45.0% |
!! | AGCGTTTTGATCAAGGCAAC+TGG | - | tig0012275:27870-27889 | None:intergenic | 45.0% |
! | ATGTTGCTAGAGATAACGGC+CGG | - | tig0012275:27905-27924 | None:intergenic | 45.0% |
CCTTGCATTGAATTGGACGA+GGG | - | tig0012275:27941-27960 | None:intergenic | 45.0% | |
CACTCAAGTTCAGACTCTTG+AGG | + | tig0012275:28427-28446 | Msa1351420:CDS | 45.0% | |
TTCAGACTCTTGAGGCAACA+TGG | + | tig0012275:28435-28454 | Msa1351420:CDS | 45.0% | |
! | TTGGACAATTTCTCGACTCG+AGG | + | tig0012275:29341-29360 | Msa1351420:CDS | 45.0% |
ATAACACTCCCCCTCAAGAT+GGG | + | tig0012275:29756-29775 | Msa1351420:intron | 45.0% | |
TTACACAACCCATCTTGAGG+GGG | - | tig0012275:29767-29786 | None:intergenic | 45.0% | |
AGATCAGTTTCAGCGCTTGA+AGG | - | tig0012275:29810-29829 | None:intergenic | 45.0% | |
CTGATCTTTGCCCAATGGTT+TGG | + | tig0012275:29823-29842 | Msa1351420:intron | 45.0% | |
! | GACTTGCTCACCAAACCATT+GGG | - | tig0012275:29836-29855 | None:intergenic | 45.0% |
! | AGACTTGCTCACCAAACCAT+TGG | - | tig0012275:29837-29856 | None:intergenic | 45.0% |
TTAGTACGCTCATGGTACAC+TGG | + | tig0012275:29947-29966 | Msa1351420:intron | 45.0% | |
TTGTCGCAAAACAACGGTGT+AGG | + | tig0012275:29998-30017 | Msa1351420:intron | 45.0% | |
ACAACGGTGTAGGTGTAGAT+TGG | + | tig0012275:30008-30027 | Msa1351420:intron | 45.0% | |
CAACGGTGTAGGTGTAGATT+GGG | + | tig0012275:30009-30028 | Msa1351420:intron | 45.0% | |
TGCTCTGTATTCTGCTTCAG+CGG | + | tig0012275:30093-30112 | Msa1351420:intron | 45.0% | |
! | GTTTTCCAGGAGACTAGACT+AGG | + | tig0012275:30145-30164 | Msa1351420:intron | 45.0% |
CTAAAGACAACACCTGGACA+AGG | - | tig0012275:30283-30302 | None:intergenic | 45.0% | |
! | CTTGTCCAGGTGTTGTCTTT+AGG | + | tig0012275:30281-30300 | Msa1351420:intron | 45.0% |
CGTTACCTAAAGACAACACC+TGG | - | tig0012275:30289-30308 | None:intergenic | 45.0% | |
TTGACTGGGTAAGCAATGTC+AGG | + | tig0012275:30373-30392 | Msa1351420:intron | 45.0% | |
TGACTGGGTAAGCAATGTCA+GGG | + | tig0012275:30374-30393 | Msa1351420:intron | 45.0% | |
GACAATGCACTACCTTCTGA+AGG | + | tig0012275:30454-30473 | Msa1351420:intron | 45.0% | |
GAAACCGGTAGACTTTCCAA+TGG | - | tig0012275:30500-30519 | None:intergenic | 45.0% | |
TTCACGTCCAATTGGTGAAG+GGG | + | tig0012275:30970-30989 | Msa1351420:intron | 45.0% | |
AGGGATACACCCAAATTGAG+GGG | - | tig0012275:31080-31099 | None:intergenic | 45.0% | |
! | AAGGCACGGTTAGTTGCTAA+GGG | - | tig0012275:31099-31118 | None:intergenic | 45.0% |
! | TAAGGCACGGTTAGTTGCTA+AGG | - | tig0012275:31100-31119 | None:intergenic | 45.0% |
! | GCATCGAAAGGTATAAGGCA+CGG | - | tig0012275:31113-31132 | None:intergenic | 45.0% |
GAAAGCAATTGGTTGCCGAT+GGG | - | tig0012275:31166-31185 | None:intergenic | 45.0% | |
AGAAAGCAATTGGTTGCCGA+TGG | - | tig0012275:31167-31186 | None:intergenic | 45.0% | |
GCTTTCTTTCCGTTAGGTAG+AGG | + | tig0012275:31180-31199 | Msa1351420:intron | 45.0% | |
TCCGTTAGGTAGAGGAACTA+AGG | + | tig0012275:31188-31207 | Msa1351420:intron | 45.0% | |
ACATAATCTTCAAGGTGGCG+TGG | + | tig0012275:31441-31460 | Msa1351420:intron | 45.0% | |
GTGTTATGGTGCGTGATGAA+CGG | + | tig0012275:31466-31485 | Msa1351420:intron | 45.0% | |
GATGAACGGCGAGGAATATT+TGG | + | tig0012275:31480-31499 | Msa1351420:intron | 45.0% | |
TTCAAGGTTGTCGAGTTCCA+AGG | + | tig0012275:31530-31549 | Msa1351420:intron | 45.0% | |
TCCAAGGCTATTTGTGTTGG+TGG | + | tig0012275:31546-31565 | Msa1351420:intron | 45.0% | |
TCCACCAACACAAATAGCCT+TGG | - | tig0012275:31550-31569 | None:intergenic | 45.0% | |
! | GAACATGGTCTGAAGGTGTA+GGG | + | tig0012275:31568-31587 | Msa1351420:intron | 45.0% |
! | AACATGGTCTGAAGGTGTAG+GGG | + | tig0012275:31569-31588 | Msa1351420:intron | 45.0% |
GTAGGGCTGGATTCATTAGT+AGG | + | tig0012275:31609-31628 | Msa1351420:intron | 45.0% | |
CCTACTCACACTTTCACAGA+AGG | - | tig0012275:31642-31661 | None:intergenic | 45.0% | |
! | CCTTCTGTGAAAGTGTGAGT+AGG | + | tig0012275:31639-31658 | Msa1351420:intron | 45.0% |
GGATATCCCCATGGTCAAAA+AGG | - | tig0012275:31816-31835 | None:intergenic | 45.0% | |
!! | GCATCTCCTGGAGTGTTTTT+AGG | - | tig0012275:31837-31856 | None:intergenic | 45.0% |
TGTGAGTGATGTGTGTGTTG+TGG | + | tig0012275:31871-31890 | Msa1351420:intron | 45.0% | |
TACTTGCACTGTTTGCCCTT+TGG | - | tig0012275:32480-32499 | None:intergenic | 45.0% | |
TTTGGAGATAAAGTTGGGGC+TGG | + | tig0012275:32542-32561 | Msa1351420:intron | 45.0% | |
!! | GTGATGGGTGAACAACATAG+AGG | - | tig0012275:32659-32678 | None:intergenic | 45.0% |
GACGAAGAGGATTACTGTGA+TGG | - | tig0012275:32675-32694 | None:intergenic | 45.0% | |
CATGTTTACTACAGGTCCAG+AGG | - | tig0012275:32697-32716 | None:intergenic | 45.0% | |
AGAAGAAAAACAGCGGAGTG+AGG | + | tig0012275:32991-33010 | Msa1351420:intron | 45.0% | |
! | CGACCTCTTGCAAATTTTGC+AGG | - | tig0012275:33019-33038 | None:intergenic | 45.0% |
AGAACCACGACGAGATTTGT+TGG | + | tig0012275:33189-33208 | Msa1351420:intron | 45.0% | |
TGTTCCATTTGCAAGGCTGA+TGG | - | tig0012275:33280-33299 | None:intergenic | 45.0% | |
TGATTGTTGAACAGCCATGG+CGG | + | tig0012275:33339-33358 | Msa1351420:intron | 45.0% | |
!! | GAATATGCTTTGGGAACCGA+AGG | + | tig0012275:33427-33446 | Msa1351420:intron | 45.0% |
! | CCTATGGATTAACAGTGCTC+GGG | - | tig0012275:33749-33768 | None:intergenic | 45.0% |
CCATAGCCAATTCCATCCTA+TGG | - | tig0012275:33765-33784 | None:intergenic | 45.0% | |
CCATAGGATGGAATTGGCTA+TGG | + | tig0012275:33762-33781 | Msa1351420:intron | 45.0% | |
TAGGATGGAATTGGCTATGG+TGG | + | tig0012275:33765-33784 | Msa1351420:intron | 45.0% | |
AGGATGGAATTGGCTATGGT+GGG | + | tig0012275:33766-33785 | Msa1351420:intron | 45.0% | |
!!! | GTTTTTGGCTTCAAGTGCCA+TGG | + | tig0012275:33903-33922 | Msa1351420:intron | 45.0% |
TGTGTGACAAGTATTTGGCC+TGG | + | tig0012275:33970-33989 | Msa1351420:intron | 45.0% | |
TGACAAGTATTTGGCCTGGT+TGG | + | tig0012275:33974-33993 | Msa1351420:intron | 45.0% | |
! | GGAGATGTTATCGACTAAGC+TGG | - | tig0012275:34284-34303 | None:intergenic | 45.0% |
!! | AATGGTTAAAGAGTGTCCCG+AGG | + | tig0012275:34498-34517 | Msa1351420:intron | 45.0% |
!! | ATGGTTAAAGAGTGTCCCGA+GGG | + | tig0012275:34499-34518 | Msa1351420:intron | 45.0% |
! | GTATGATTTGTATGGCACCC+TGG | + | tig0012275:35943-35962 | Msa1351420:CDS | 45.0% |
GAAGAGCTCAAGTTCTTCCA+GGG | - | tig0012275:35963-35982 | None:intergenic | 45.0% | |
TGAAGAGCTCAAGTTCTTCC+AGG | - | tig0012275:35964-35983 | None:intergenic | 45.0% | |
GTAGTATGGGAGAGAATCCA+AGG | - | tig0012275:36114-36133 | None:intergenic | 45.0% | |
CTTGTTAACGAGTGCCCTAA+TGG | - | tig0012275:36630-36649 | None:intergenic | 45.0% | |
GCCATGTATTCTTCAACGGT+TGG | - | tig0012275:36738-36757 | None:intergenic | 45.0% | |
GCAAATGGGTGTGTATCCAT+AGG | + | tig0012275:36756-36775 | Msa1351420:intron | 45.0% | |
GCACATGCTGTATTTACCCA+TGG | + | tig0012275:36780-36799 | Msa1351420:intron | 45.0% | |
! | GTGGCATCGAAAAGTAACCA+TGG | - | tig0012275:36800-36819 | None:intergenic | 45.0% |
! | GGAAGACTTGGTTCGTTTAG+GGG | + | tig0012275:36833-36852 | Msa1351420:intron | 45.0% |
TGCTGTCAGGCGAATTATGT+TGG | - | tig0012275:36865-36884 | None:intergenic | 45.0% | |
AACTGGAGCTTCCGAAATAG+AGG | + | tig0012275:37733-37752 | Msa1351420:CDS | 45.0% | |
!! | AATTTAATTAAATTATTACA+CGG | - | tig0012275:28189-28208 | None:intergenic | 5.0% |
!! | AAATAAAAAAATAAAAAAAC+TGG | + | tig0012275:28516-28535 | Msa1351420:intron | 5.0% |
!!! | TAAATATGTATTTTTTTATA+GGG | - | tig0012275:29069-29088 | None:intergenic | 5.0% |
!!! | ATAAATATGTATTTTTTTAT+AGG | - | tig0012275:29070-29089 | None:intergenic | 5.0% |
!!! | TTTTATTTTTTAATTTTACA+CGG | + | tig0012275:34318-34337 | Msa1351420:intron | 5.0% |
!! | TTATAAAAAATTGTAATTTA+AGG | - | tig0012275:34409-34428 | None:intergenic | 5.0% |
!! | AATAATTACTTAATTTAAAA+TGG | + | tig0012275:34480-34499 | Msa1351420:intron | 5.0% |
!!! | TTAAAATTTCAAATTTTTTT+TGG | + | tig0012275:35351-35370 | Msa1351420:intron | 5.0% |
!!! | TAAAATTTCAAATTTTTTTT+GGG | + | tig0012275:35352-35371 | Msa1351420:intron | 5.0% |
!! | TAAAAAATATCATTATTTAA+CGG | - | tig0012275:36010-36029 | None:intergenic | 5.0% |
!!! | ATATTTTTTTAATTATAAAG+AGG | + | tig0012275:37464-37483 | Msa1351420:intron | 5.0% |
TGGGGGAGAAGCAAATATGG+GGG | - | tig0012275:27850-27869 | None:intergenic | 50.0% | |
CTGGGGGAGAAGCAAATATG+GGG | - | tig0012275:27851-27870 | None:intergenic | 50.0% | |
! | AGAGATAACGGCCGGTTGTT+AGG | - | tig0012275:27897-27916 | None:intergenic | 50.0% |
CCCTCGTCCAATTCAATGCA+AGG | + | tig0012275:27938-27957 | Msa1351420:CDS | 50.0% | |
GCCTTGCATTGAATTGGACG+AGG | - | tig0012275:27942-27961 | None:intergenic | 50.0% | |
! | GAGTCTGAACTTGAGTGCTG+TGG | - | tig0012275:28424-28443 | None:intergenic | 50.0% |
!! | GGGAGTGTTATCGACTAAGC+TGG | - | tig0012275:29747-29766 | None:intergenic | 50.0% |
GATAACACTCCCCCTCAAGA+TGG | + | tig0012275:29755-29774 | Msa1351420:intron | 50.0% | |
ACGCTCATGGTACACTGGAT+TGG | + | tig0012275:29952-29971 | Msa1351420:intron | 50.0% | |
GGAAAGAAGAGACCTTGTCC+AGG | + | tig0012275:30268-30287 | Msa1351420:intron | 50.0% | |
AGAACCACGTCAACCACACA+TGG | - | tig0012275:30332-30351 | None:intergenic | 50.0% | |
GCGTCACTGTGAGGTAGATT+AGG | + | tig0012275:30398-30417 | Msa1351420:intron | 50.0% | |
TCACCATATCGGCGTCTTGT+TGG | - | tig0012275:30427-30446 | None:intergenic | 50.0% | |
ACAAGACGCCGATATGGTGA+AGG | + | tig0012275:30427-30446 | Msa1351420:intron | 50.0% | |
!! | TGGAAAGTCTACCGGTTTCG+AGG | + | tig0012275:30501-30520 | Msa1351420:intron | 50.0% |
AAACTGGCCCCTTCACCAAT+TGG | - | tig0012275:30980-30999 | None:intergenic | 50.0% | |
GGGATACACCCAAATTGAGG+GGG | - | tig0012275:31079-31098 | None:intergenic | 50.0% | |
! | CGGCAGCATCGAAAGGTATA+AGG | - | tig0012275:31118-31137 | None:intergenic | 50.0% |
! | ATTCTGACGGCAGCATCGAA+AGG | - | tig0012275:31125-31144 | None:intergenic | 50.0% |
TGCATTGCATTGCGCCATTC+CGG | + | tig0012275:31249-31268 | Msa1351420:intron | 50.0% | |
CGGCTCAGTTTCAACAGCTA+AGG | + | tig0012275:31299-31318 | Msa1351420:intron | 50.0% | |
CGGCGAGGAATATTTGGCAA+AGG | + | tig0012275:31486-31505 | Msa1351420:intron | 50.0% | |
! | GTTGGTGGAACATGGTCTGA+AGG | + | tig0012275:31561-31580 | Msa1351420:intron | 50.0% |
! | GGAACATGGTCTGAAGGTGT+AGG | + | tig0012275:31567-31586 | Msa1351420:intron | 50.0% |
GACTGGAATGTTTGTAGGGC+TGG | + | tig0012275:31596-31615 | Msa1351420:intron | 50.0% | |
!! | GATTTATGGCACTGGCGCTT+AGG | - | tig0012275:32572-32591 | None:intergenic | 50.0% |
ACATAGAGGCCTCTACACCT+TGG | - | tig0012275:32645-32664 | None:intergenic | 50.0% | |
CAGTAATCCTCTTCGTCCTC+TGG | + | tig0012275:32678-32697 | Msa1351420:intron | 50.0% | |
GATGAAGACTGAGAATCCGG+AGG | + | tig0012275:33097-33116 | Msa1351420:intron | 50.0% | |
! | TGTTGCTGTTGTTCCACCTC+CGG | - | tig0012275:33116-33135 | None:intergenic | 50.0% |
CGTGGTTCTTCTTCTCGTGA+CGG | - | tig0012275:33178-33197 | None:intergenic | 50.0% | |
GTGTCCATCAGCCTTGCAAA+TGG | + | tig0012275:33273-33292 | Msa1351420:intron | 50.0% | |
TTCAATCGAGCAATCCGCCA+TGG | - | tig0012275:33356-33375 | None:intergenic | 50.0% | |
ACTCATGGATCCTCTCCCTT+CGG | - | tig0012275:33446-33465 | None:intergenic | 50.0% | |
ACCGCAAACACAAGCAGGAA+GGG | + | tig0012275:33564-33583 | Msa1351420:intron | 50.0% | |
ACCCTTCCTGCTTGTGTTTG+CGG | - | tig0012275:33568-33587 | None:intergenic | 50.0% | |
! | CCCGAGCACTGTTAATCCAT+AGG | + | tig0012275:33746-33765 | Msa1351420:intron | 50.0% |
GGCTTCAAGTGCCATGGTAA+TGG | + | tig0012275:33909-33928 | Msa1351420:intron | 50.0% | |
!! | CAAGTGCCATGGTAATGGCT+CGG | + | tig0012275:33914-33933 | Msa1351420:intron | 50.0% |
CTCCATTCATCAGACCAACC+AGG | - | tig0012275:33991-34010 | None:intergenic | 50.0% | |
!! | CTGGTTGGTCTGATGAATGG+AGG | + | tig0012275:33989-34008 | Msa1351420:intron | 50.0% |
ATCAAGGGCAGCCATTTGTG+TGG | + | tig0012275:34029-34048 | Msa1351420:intron | 50.0% | |
TCAAGGGCAGCCATTTGTGT+GGG | + | tig0012275:34030-34049 | Msa1351420:intron | 50.0% | |
GAAGTGGATCTTGACCCAGT+TGG | + | tig0012275:35682-35701 | Msa1351420:intron | 50.0% | |
CTCTTGCAATGGTTGCTGTC+AGG | - | tig0012275:36878-36897 | None:intergenic | 50.0% | |
! | TTTCTCGACTCGAGGCTCGA+TGG | + | tig0012275:29349-29368 | Msa1351420:CDS | 55.0% |
CAGCGCTTGAAGGCCAAGAT+GGG | - | tig0012275:29800-29819 | None:intergenic | 55.0% | |
TCAGCGCTTGAAGGCCAAGA+TGG | - | tig0012275:29801-29820 | None:intergenic | 55.0% | |
TGGGACCTAGTCTAGTCTCC+TGG | - | tig0012275:30153-30172 | None:intergenic | 55.0% | |
ACAACTCGTCGCTCAACCTC+CGG | - | tig0012275:30190-30209 | None:intergenic | 55.0% | |
GAGGTTGAGCGACGAGTTGT+GGG | + | tig0012275:30190-30209 | Msa1351420:intron | 55.0% | |
CGACCAACAAGACGCCGATA+TGG | + | tig0012275:30421-30440 | Msa1351420:intron | 55.0% | |
!! | CTACCGGTTTCGAGGCAGTA+AGG | + | tig0012275:30509-30528 | Msa1351420:intron | 55.0% |
! | TGGCCTTACTGCCTCGAAAC+CGG | - | tig0012275:30515-30534 | None:intergenic | 55.0% |
AAGGTGGCGTGGACGTGTTA+TGG | + | tig0012275:31452-31471 | Msa1351420:intron | 55.0% | |
! | GAAGGTGTAGGGGATGTGAC+TGG | + | tig0012275:31579-31598 | Msa1351420:intron | 55.0% |
TACAGGTCCAGAGGACGAAG+AGG | - | tig0012275:32688-32707 | None:intergenic | 55.0% | |
GTGAGAGGTCGGAAACCATG+TGG | + | tig0012275:32921-32940 | Msa1351420:intron | 55.0% | |
GTCGGAAACCATGTGGTGAG+TGG | + | tig0012275:32928-32947 | Msa1351420:intron | 55.0% | |
!! | TTCTGGTGCCACTCACCACA+TGG | - | tig0012275:32939-32958 | None:intergenic | 55.0% |
GAAGACTGAGAATCCGGAGG+TGG | + | tig0012275:33100-33119 | Msa1351420:intron | 55.0% | |
AACCGGACCTTCTGCTTCAC+CGG | - | tig0012275:33149-33168 | None:intergenic | 55.0% | |
TCTTCTTCTCGTGACGGTCG+CGG | - | tig0012275:33172-33191 | None:intergenic | 55.0% | |
GGCTCCAACAAATCTCGTCG+TGG | - | tig0012275:33196-33215 | None:intergenic | 55.0% | |
ACAGCACCGCAAACACAAGC+AGG | + | tig0012275:33559-33578 | Msa1351420:intron | 55.0% | |
CACCGCAAACACAAGCAGGA+AGG | + | tig0012275:33563-33582 | Msa1351420:intron | 55.0% | |
TTGGAGCCGAGCCATTACCA+TGG | - | tig0012275:33923-33942 | None:intergenic | 55.0% | |
!! | GGCCTGGTTGGTCTGATGAA+TGG | + | tig0012275:33986-34005 | Msa1351420:intron | 55.0% |
AGTCTCGTTAACGGTGCCCT+CGG | - | tig0012275:34518-34537 | None:intergenic | 55.0% | |
GGAGGTTGAGCGACGAGTTG+TGG | + | tig0012275:30189-30208 | Msa1351420:intron | 60.0% | |
CGGATAGCTGCGTCCATGTG+TGG | + | tig0012275:30316-30335 | Msa1351420:intron | 60.0% | |
GCGTCCATGTGTGGTTGACG+TGG | + | tig0012275:30325-30344 | Msa1351420:intron | 60.0% | |
TCCCCCTTGCGACGAAATCC+CGG | + | tig0012275:30895-30914 | Msa1351420:intron | 60.0% | |
TCCGGGATTTCGTCGCAAGG+GGG | - | tig0012275:30899-30918 | None:intergenic | 60.0% | |
CTCCGGGATTTCGTCGCAAG+GGG | - | tig0012275:30900-30919 | None:intergenic | 60.0% | |
CCTCCGGGATTTCGTCGCAA+GGG | - | tig0012275:30901-30920 | None:intergenic | 60.0% | |
ACCTCCGGGATTTCGTCGCA+AGG | - | tig0012275:30902-30921 | None:intergenic | 60.0% | |
ATGGTGCGTGATGAACGGCG+AGG | + | tig0012275:31471-31490 | Msa1351420:intron | 60.0% | |
AGCCGGTGAAGCAGAAGGTC+CGG | + | tig0012275:33144-33163 | Msa1351420:intron | 60.0% | |
!! | GCTTTGGGAACCGAAGGGAG+AGG | + | tig0012275:33433-33452 | Msa1351420:intron | 60.0% |
! | GGTAATGGCTCGGCTCCAAG+TGG | + | tig0012275:33924-33943 | Msa1351420:intron | 60.0% |
GTCTCGTTAACGGTGCCCTC+GGG | - | tig0012275:34517-34536 | None:intergenic | 60.0% | |
TGTCAGGGCGCGTCACTGTG+AGG | + | tig0012275:30389-30408 | Msa1351420:intron | 65.0% | |
CCCTTGCGACGAAATCCCGG+AGG | + | tig0012275:30898-30917 | Msa1351420:intron | 65.0% | |
TCTCGTGACGGTCGCGGAAC+CGG | - | tig0012275:33166-33185 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0012275 | gene | 27840 | 37906 | 27840 | ID=Msa1351420;Name=Msa1351420 |
tig0012275 | mRNA | 27840 | 37906 | 27840 | ID=Msa1351420-mRNA-1;Parent=Msa1351420;Name=Msa1351420-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.16|0|1|0.33|0.57|7|0|430 |
tig0012275 | exon | 27840 | 28073 | 27840 | ID=Msa1351420-mRNA-1:exon:7735;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 28216 | 28456 | 28216 | ID=Msa1351420-mRNA-1:exon:7736;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 29241 | 29487 | 29241 | ID=Msa1351420-mRNA-1:exon:7737;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 35781 | 35999 | 35781 | ID=Msa1351420-mRNA-1:exon:7738;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 36097 | 36238 | 36097 | ID=Msa1351420-mRNA-1:exon:7739;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 37680 | 37872 | 37680 | ID=Msa1351420-mRNA-1:exon:7740;Parent=Msa1351420-mRNA-1 |
tig0012275 | exon | 37890 | 37906 | 37890 | ID=Msa1351420-mRNA-1:exon:7741;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 27840 | 28073 | 27840 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 28216 | 28456 | 28216 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 29241 | 29487 | 29241 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 35781 | 35999 | 35781 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 36097 | 36238 | 36097 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 37680 | 37872 | 37680 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
tig0012275 | CDS | 37890 | 37906 | 37890 | ID=Msa1351420-mRNA-1:cds;Parent=Msa1351420-mRNA-1 |
Gene Sequence |
Protein sequence |