Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999390 | KEH27117.1 | 52.239 | 67 | 32 | 0 | 19 | 85 | 23 | 89 | 1.67e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999390 | A0A072UBW5 | 52.239 | 67 | 32 | 0 | 19 | 85 | 23 | 89 | 7.99e-16 | 77.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055450 | Msa0999390 | 0.831214 | 1.895123e-55 | -8.615850e-47 |
| Msa0104500 | Msa0999390 | 0.844511 | 7.225106e-59 | -8.615850e-47 |
| Msa0639460 | Msa0999390 | 0.836215 | 1.066105e-56 | -8.615850e-47 |
| Msa0667850 | Msa0999390 | 0.817327 | 3.492483e-52 | -8.615850e-47 |
| Msa0669840 | Msa0999390 | 0.825778 | 3.893740e-54 | -8.615850e-47 |
| Msa0682360 | Msa0999390 | 0.854540 | 1.149736e-61 | -8.615850e-47 |
| Msa0725860 | Msa0999390 | 0.827190 | 1.793392e-54 | -8.615850e-47 |
| Msa0739480 | Msa0999390 | 0.805964 | 1.035088e-49 | -8.615850e-47 |
| Msa0742180 | Msa0999390 | 0.814585 | 1.429559e-51 | -8.615850e-47 |
| Msa0786040 | Msa0999390 | 0.853443 | 2.382102e-61 | -8.615850e-47 |
| Msa0823400 | Msa0999390 | 0.822350 | 2.483131e-53 | -8.615850e-47 |
| Msa0124130 | Msa0999390 | 0.813232 | 2.839996e-51 | -8.615850e-47 |
| Msa0149140 | Msa0999390 | 0.803015 | 4.265098e-49 | -8.615850e-47 |
| Msa0194380 | Msa0999390 | 0.835548 | 1.573741e-56 | -8.615850e-47 |
| Msa0206800 | Msa0999390 | 0.825018 | 5.891290e-54 | -8.615850e-47 |
| Msa0236110 | Msa0999390 | 0.802388 | 5.745211e-49 | -8.615850e-47 |
| Msa0373960 | Msa0999390 | 0.871004 | 9.507565e-67 | -8.615850e-47 |
| Msa0406000 | Msa0999390 | 0.815408 | 9.388102e-52 | -8.615850e-47 |
| Msa0423100 | Msa0999390 | 0.894827 | 1.709572e-75 | -8.615850e-47 |
| Msa0424330 | Msa0999390 | 0.800922 | 1.148276e-48 | -8.615850e-47 |
| Msa0424340 | Msa0999390 | 0.803461 | 3.447172e-49 | -8.615850e-47 |
| Msa0441590 | Msa0999390 | 0.817343 | 3.463717e-52 | -8.615850e-47 |
| Msa0451400 | Msa0999390 | 0.814746 | 1.316988e-51 | -8.615850e-47 |
| Msa0469260 | Msa0999390 | 0.860022 | 2.759653e-63 | -8.615850e-47 |
| Msa0996270 | Msa0999390 | 0.812436 | 4.244062e-51 | -8.615850e-47 |
| Msa0999340 | Msa0999390 | 0.981330 | 2.510737e-152 | -8.615850e-47 |
| Msa0999350 | Msa0999390 | 0.908814 | 1.132401e-81 | -8.615850e-47 |
| Msa0999360 | Msa0999390 | 0.873198 | 1.770113e-67 | -8.615850e-47 |
| Msa0999390 | Msa0999400 | 0.918058 | 2.487950e-86 | -8.615850e-47 |
| Msa0999390 | Msa0999410 | 0.878227 | 3.329767e-69 | -8.615850e-47 |
| Msa0999390 | Msa0999700 | 0.892470 | 1.541595e-74 | -8.615850e-47 |
| Msa0999390 | Msa1034680 | 0.808590 | 2.874466e-50 | -8.615850e-47 |
| Msa0999390 | Msa1047990 | 0.809135 | 2.197219e-50 | -8.615850e-47 |
| Msa0999390 | Msa1060580 | 0.827097 | 1.888200e-54 | -8.615850e-47 |
| Msa0999390 | Msa1073340 | 0.809623 | 1.726411e-50 | -8.615850e-47 |
| Msa0999390 | Msa1084520 | 0.834631 | 2.681096e-56 | -8.615850e-47 |
| Msa0999390 | Msa1092020 | 0.835082 | 2.064128e-56 | -8.615850e-47 |
| Msa0999390 | Msa1125810 | 0.825330 | 4.970505e-54 | -8.615850e-47 |
| Msa0999390 | Msa1135380 | 0.824793 | 6.657569e-54 | -8.615850e-47 |
| Msa0999390 | Msa1145020 | 0.803302 | 3.720146e-49 | -8.615850e-47 |
| Msa0999390 | Msa1171310 | 0.830734 | 2.486135e-55 | -8.615850e-47 |
| Msa0999390 | Msa1176580 | 0.804070 | 2.577013e-49 | -8.615850e-47 |
| Msa0999390 | Msa1177400 | 0.809848 | 1.544506e-50 | -8.615850e-47 |
| Msa0999390 | Msa1179360 | 0.811569 | 6.556771e-51 | -8.615850e-47 |
| Msa0999390 | Msa1179520 | 0.817759 | 2.790941e-52 | -8.615850e-47 |
| Msa0999390 | Msa1182730 | 0.814637 | 1.391901e-51 | -8.615850e-47 |
| Msa0999390 | Msa1183430 | 0.826075 | 3.309612e-54 | -8.615850e-47 |
| Msa0999390 | Msa1201160 | 0.804195 | 2.426982e-49 | -8.615850e-47 |
| Msa0999390 | Msa1228190 | 0.863593 | 2.228116e-64 | -8.615850e-47 |
| Msa0999390 | Msa1243020 | 0.816855 | 4.460304e-52 | -8.615850e-47 |
| Msa0999390 | Msa1271260 | 0.872907 | 2.215970e-67 | -8.615850e-47 |
| Msa0999390 | Msa1292010 | 0.832043 | 1.183669e-55 | -8.615850e-47 |
| Msa0999390 | Msa1294290 | 0.803887 | 2.812734e-49 | -8.615850e-47 |
| Msa0999390 | Msa1339440 | 0.864267 | 1.374939e-64 | -8.615850e-47 |
| Msa0999390 | Msa1345420 | 0.831238 | 1.869908e-55 | -8.615850e-47 |
| Msa0999390 | Msa1347360 | 0.814763 | 1.305312e-51 | -8.615850e-47 |
| Msa0999390 | Msa1351420 | 0.820920 | 5.315822e-53 | -8.615850e-47 |
| Msa0999390 | Msa1379970 | 0.800587 | 1.344112e-48 | -8.615850e-47 |
| Msa0999390 | Msa1389050 | 0.895535 | 8.735831e-76 | -8.615850e-47 |
| Msa0999390 | Msa1435480 | 0.884210 | 2.329214e-71 | -8.615850e-47 |
| Msa0999390 | Msa1442630 | 0.813982 | 1.942605e-51 | -8.615850e-47 |
| Msa0999390 | Msa1456730 | 0.809125 | 2.208919e-50 | -8.615850e-47 |
| Msa0999390 | Msa1458910 | 0.870645 | 1.248267e-66 | -8.615850e-47 |
| Msa0999390 | Msa1462530 | 0.831633 | 1.494541e-55 | -8.615850e-47 |
| Msa0252770 | Msa0999390 | 0.824585 | 7.454557e-54 | -8.615850e-47 |
| Msa0277290 | Msa0999390 | 0.824350 | 8.466670e-54 | -8.615850e-47 |
| Msa0280750 | Msa0999390 | 0.829309 | 5.531875e-55 | -8.615850e-47 |
| Msa0288190 | Msa0999390 | 0.816615 | 5.048122e-52 | -8.615850e-47 |
| Msa0288200 | Msa0999390 | 0.810141 | 1.335833e-50 | -8.615850e-47 |
| Msa0291330 | Msa0999390 | 0.808609 | 2.847923e-50 | -8.615850e-47 |
| Msa0314630 | Msa0999390 | 0.803590 | 3.241291e-49 | -8.615850e-47 |
| Msa0322830 | Msa0999390 | 0.850088 | 2.128302e-60 | -8.615850e-47 |
| Msa0322840 | Msa0999390 | 0.824497 | 7.815626e-54 | -8.615850e-47 |
| Msa0322860 | Msa0999390 | 0.848021 | 7.990910e-60 | -8.615850e-47 |
| Msa0329620 | Msa0999390 | 0.820726 | 5.891305e-53 | -8.615850e-47 |
| Msa0331540 | Msa0999390 | 0.809602 | 1.744837e-50 | -8.615850e-47 |
| Msa0351770 | Msa0999390 | 0.823235 | 1.545159e-53 | -8.615850e-47 |
| Msa0492190 | Msa0999390 | 0.813333 | 2.698765e-51 | -8.615850e-47 |
| Msa0515950 | Msa0999390 | 0.808553 | 2.927275e-50 | -8.615850e-47 |
| Msa0520510 | Msa0999390 | 0.841316 | 5.116438e-58 | -8.615850e-47 |
| Msa0534930 | Msa0999390 | 0.804420 | 2.179059e-49 | -8.615850e-47 |
| Msa0546710 | Msa0999390 | 0.832470 | 9.281335e-56 | -8.615850e-47 |
| Msa0546830 | Msa0999390 | 0.808916 | 2.447869e-50 | -8.615850e-47 |
| Msa0575740 | Msa0999390 | 0.823696 | 1.205551e-53 | -8.615850e-47 |
| Msa0591790 | Msa0999390 | 0.804754 | 1.856031e-49 | -8.615850e-47 |
| Msa0591800 | Msa0999390 | 0.901039 | 4.007511e-78 | -8.615850e-47 |
| Msa0845940 | Msa0999390 | 0.813668 | 2.278106e-51 | -8.615850e-47 |
| Msa0860170 | Msa0999390 | 0.820181 | 7.854292e-53 | -8.615850e-47 |
| Msa0860280 | Msa0999390 | 0.802459 | 5.554537e-49 | -8.615850e-47 |
| Msa0862310 | Msa0999390 | 0.832342 | 9.983588e-56 | -8.615850e-47 |
| Msa0899950 | Msa0999390 | 0.874878 | 4.787109e-68 | -8.615850e-47 |
| Msa0927120 | Msa0999390 | 0.835696 | 1.443697e-56 | -8.615850e-47 |
| Msa0946210 | Msa0999390 | 0.825268 | 5.141381e-54 | -8.615850e-47 |
| Msa0961560 | Msa0999390 | 0.802436 | 5.616602e-49 | -8.615850e-47 |
| Msa0965310 | Msa0999390 | 0.896816 | 2.564619e-76 | -8.615850e-47 |
| Msa0979510 | Msa0999390 | 0.814463 | 1.521023e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999390 | MtrunA17_Chr6g0485481 | 52.239 | 67 | 32 | 0 | 19 | 85 | 23 | 89 | 1.54e-19 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 15 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATGAAGACATTGATTAT+TGG | 0.204699 | 6_4:+81355738 | Msa0999390:intron |
| AATCAAGTCCTTCATCGTTT+AGG | 0.330565 | 6_4:-81355766 | None:intergenic |
| GAGTTCCACCGGCTGCAATA+AGG | 0.392268 | 6_4:-81355913 | None:intergenic |
| GTTAATTCGATTATTAAAGC+CGG | 0.475431 | 6_4:+81355829 | Msa0999390:CDS |
| TTGGAAATTATCAAGAAGAA+TGG | 0.513592 | 6_4:+81355882 | Msa0999390:CDS |
| TTAATTCGATTATTAAAGCC+GGG | 0.522204 | 6_4:+81355830 | Msa0999390:CDS |
| CAAAGTTACCTTATTGCAGC+CGG | 0.529219 | 6_4:+81355905 | Msa0999390:CDS |
| ACCATGTAGAGGAGTTCAAT+CGG | 0.544476 | 6_4:+81355132 | Msa0999390:CDS |
| CTGTAAAAGTTAACATGTAG+AGG | 0.559805 | 6_4:-81355935 | None:intergenic |
| GCCGATTGAACTCCTCTACA+TGG | 0.561743 | 6_4:-81355133 | None:intergenic |
| TGGCAAGACCTAAACGATGA+AGG | 0.570614 | 6_4:+81355758 | Msa0999390:CDS |
| AGTTACCTTATTGCAGCCGG+TGG | 0.602448 | 6_4:+81355908 | Msa0999390:CDS |
| AACATGTAGAGGAGTTCCAC+CGG | 0.612575 | 6_4:-81355924 | None:intergenic |
| TTGTAAAAGTTACCATGTAG+AGG | 0.612953 | 6_4:+81355121 | Msa0999390:CDS |
| GAGTTCAATCGGCTGCAACA+AGG | 0.644422 | 6_4:+81355143 | Msa0999390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTTGAAAAAAAAATT+AGG | + | chr6_4:81355564-81355583 | Msa0999390:intron | 10.0% |
| !!! | AATGTTTTGAAAAAAAAATT+AGG | + | chr6_4:81355564-81355583 | Msa0999390:intron | 10.0% |
| !!! | TAAAAAATTAAAGTATTACC+CGG | - | chr6_4:81355851-81355870 | None:intergenic | 15.0% |
| !!! | TAAAAAATTAAAGTATTACC+CGG | - | chr6_4:81355851-81355870 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTTTTTACTTCAG+CGG | - | chr6_4:81355202-81355221 | None:intergenic | 20.0% |
| !! | TTAATTAGAATATCAAAGTC+GGG | - | chr6_4:81355231-81355250 | None:intergenic | 20.0% |
| !! | GTTAATTAGAATATCAAAGT+CGG | - | chr6_4:81355232-81355251 | None:intergenic | 20.0% |
| !!! | AAAATGAAGACATTGATTAT+TGG | - | chr6_4:81355738-81355757 | None:intergenic | 20.0% |
| !!! | GTCTTCATTTTTAAATTCAA+AGG | - | chr6_4:81355729-81355748 | None:intergenic | 20.0% |
| !!! | AAAATGAAGACATTGATTAT+TGG | + | chr6_4:81355738-81355757 | Msa0999390:intron | 20.0% |
| !!! | ACTTTAATTTTTTACTTCAG+TGG | + | chr6_4:81355857-81355876 | Msa0999390:CDS | 20.0% |
| !!! | TTTAGTTTTTTTTACTTCAG+CGG | - | chr6_4:81355202-81355221 | None:intergenic | 20.0% |
| !! | TTAATTAGAATATCAAAGTC+GGG | - | chr6_4:81355231-81355250 | None:intergenic | 20.0% |
| !! | GTTAATTAGAATATCAAAGT+CGG | - | chr6_4:81355232-81355251 | None:intergenic | 20.0% |
| !!! | AAAATGAAGACATTGATTAT+TGG | - | chr6_4:81355738-81355757 | None:intergenic | 20.0% |
| !!! | GTCTTCATTTTTAAATTCAA+AGG | - | chr6_4:81355729-81355748 | None:intergenic | 20.0% |
| !!! | AAAATGAAGACATTGATTAT+TGG | + | chr6_4:81355738-81355757 | Msa0999390:intron | 20.0% |
| !!! | ACTTTAATTTTTTACTTCAG+TGG | + | chr6_4:81355857-81355876 | Msa0999390:CDS | 20.0% |
| ! | TTAGCATCAATACAAAAATC+AGG | + | chr6_4:81355276-81355295 | Msa0999390:intron | 25.0% |
| !! | AGAGAATTGCTAATAACTTT+TGG | - | chr6_4:81355351-81355370 | None:intergenic | 25.0% |
| ! | GAAAAAAAAATTAGGCGTTA+CGG | + | chr6_4:81355572-81355591 | Msa0999390:intron | 25.0% |
| ! | GTTAATTCGATTATTAAAGC+CGG | + | chr6_4:81355829-81355848 | Msa0999390:CDS | 25.0% |
| ! | TTAATTCGATTATTAAAGCC+GGG | + | chr6_4:81355830-81355849 | Msa0999390:CDS | 25.0% |
| !!! | ATTTTTTACTTCAGTGGAAT+TGG | + | chr6_4:81355863-81355882 | Msa0999390:CDS | 25.0% |
| ! | TTGGAAATTATCAAGAAGAA+TGG | + | chr6_4:81355882-81355901 | Msa0999390:CDS | 25.0% |
| ! | TTAGCATCAATACAAAAATC+AGG | + | chr6_4:81355276-81355295 | Msa0999390:intron | 25.0% |
| !! | AGAGAATTGCTAATAACTTT+TGG | - | chr6_4:81355351-81355370 | None:intergenic | 25.0% |
| ! | GAAAAAAAAATTAGGCGTTA+CGG | + | chr6_4:81355572-81355591 | Msa0999390:intron | 25.0% |
| ! | GTTAATTCGATTATTAAAGC+CGG | + | chr6_4:81355829-81355848 | Msa0999390:CDS | 25.0% |
| ! | TTAATTCGATTATTAAAGCC+GGG | + | chr6_4:81355830-81355849 | Msa0999390:CDS | 25.0% |
| !!! | ATTTTTTACTTCAGTGGAAT+TGG | + | chr6_4:81355863-81355882 | Msa0999390:CDS | 25.0% |
| ! | TTGGAAATTATCAAGAAGAA+TGG | + | chr6_4:81355882-81355901 | Msa0999390:CDS | 25.0% |
| TTGTAAAAGTTACCATGTAG+AGG | + | chr6_4:81355121-81355140 | Msa0999390:CDS | 30.0% | |
| CATGGAAATTATCAAGAAGA+AGG | - | chr6_4:81355178-81355197 | None:intergenic | 30.0% | |
| TAGCAATTCTCTTATCTTCT+CGG | + | chr6_4:81355359-81355378 | Msa0999390:intron | 30.0% | |
| TCGGAATATGTGTTAATTGT+AGG | + | chr6_4:81355378-81355397 | Msa0999390:intron | 30.0% | |
| ATGTGTTAATTGTAGGTTCT+CGG | + | chr6_4:81355385-81355404 | Msa0999390:intron | 30.0% | |
| AGGTGTTAGTTGTAAGTTAT+CGG | - | chr6_4:81355676-81355695 | None:intergenic | 30.0% | |
| TAGCAATTCTCTTATCTTCT+CGG | - | chr6_4:81355359-81355378 | None:intergenic | 30.0% | |
| CTGTAAAAGTTAACATGTAG+AGG | - | chr6_4:81355938-81355957 | None:intergenic | 30.0% | |
| TTGTAAAAGTTACCATGTAG+AGG | + | chr6_4:81355121-81355140 | Msa0999390:CDS | 30.0% | |
| CATGGAAATTATCAAGAAGA+AGG | - | chr6_4:81355178-81355197 | None:intergenic | 30.0% | |
| TAGCAATTCTCTTATCTTCT+CGG | + | chr6_4:81355359-81355378 | Msa0999390:intron | 30.0% | |
| TCGGAATATGTGTTAATTGT+AGG | + | chr6_4:81355378-81355397 | Msa0999390:intron | 30.0% | |
| ATGTGTTAATTGTAGGTTCT+CGG | + | chr6_4:81355385-81355404 | Msa0999390:intron | 30.0% | |
| AGGTGTTAGTTGTAAGTTAT+CGG | - | chr6_4:81355676-81355695 | None:intergenic | 30.0% | |
| TAGCAATTCTCTTATCTTCT+CGG | - | chr6_4:81355359-81355378 | None:intergenic | 30.0% | |
| CTGTAAAAGTTAACATGTAG+AGG | - | chr6_4:81355938-81355957 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACTTCAGCGGACA+TGG | - | chr6_4:81355196-81355215 | None:intergenic | 35.0% |
| TTCTCTTATCTTCTCGGAAT+AGG | - | chr6_4:81355365-81355384 | None:intergenic | 35.0% | |
| AATCAAGTCCTTCATCGTTT+AGG | - | chr6_4:81355769-81355788 | None:intergenic | 35.0% | |
| !!! | TTTTTTTACTTCAGCGGACA+TGG | - | chr6_4:81355196-81355215 | None:intergenic | 35.0% |
| TTCTCTTATCTTCTCGGAAT+AGG | - | chr6_4:81355365-81355384 | None:intergenic | 35.0% | |
| AATCAAGTCCTTCATCGTTT+AGG | - | chr6_4:81355769-81355788 | None:intergenic | 35.0% | |
| ACCATGTAGAGGAGTTCAAT+CGG | + | chr6_4:81355132-81355151 | Msa0999390:CDS | 40.0% | |
| ! | TAGGCGTTACGGACAAATTT+TGG | + | chr6_4:81355583-81355602 | Msa0999390:intron | 40.0% |
| CAAAGTTACCTTATTGCAGC+CGG | + | chr6_4:81355905-81355924 | Msa0999390:CDS | 40.0% | |
| ACCATGTAGAGGAGTTCAAT+CGG | + | chr6_4:81355132-81355151 | Msa0999390:CDS | 40.0% | |
| ! | TAGGCGTTACGGACAAATTT+TGG | + | chr6_4:81355583-81355602 | Msa0999390:intron | 40.0% |
| CAAAGTTACCTTATTGCAGC+CGG | + | chr6_4:81355905-81355924 | Msa0999390:CDS | 40.0% | |
| TGGCAAGACAGAAACGATGA+AGG | - | chr6_4:81355303-81355322 | None:intergenic | 45.0% | |
| TGGCAAGACCTAAACGATGA+AGG | + | chr6_4:81355758-81355777 | Msa0999390:CDS | 45.0% | |
| AACATGTAGAGGAGTTCCAC+CGG | - | chr6_4:81355927-81355946 | None:intergenic | 45.0% | |
| TGGCAAGACAGAAACGATGA+AGG | - | chr6_4:81355303-81355322 | None:intergenic | 45.0% | |
| TGGCAAGACCTAAACGATGA+AGG | + | chr6_4:81355758-81355777 | Msa0999390:CDS | 45.0% | |
| AACATGTAGAGGAGTTCCAC+CGG | - | chr6_4:81355927-81355946 | None:intergenic | 45.0% | |
| GCCGATTGAACTCCTCTACA+TGG | - | chr6_4:81355136-81355155 | None:intergenic | 50.0% | |
| GAGTTCAATCGGCTGCAACA+AGG | + | chr6_4:81355143-81355162 | Msa0999390:CDS | 50.0% | |
| AGTTACCTTATTGCAGCCGG+TGG | + | chr6_4:81355908-81355927 | Msa0999390:CDS | 50.0% | |
| GCCGATTGAACTCCTCTACA+TGG | - | chr6_4:81355136-81355155 | None:intergenic | 50.0% | |
| GAGTTCAATCGGCTGCAACA+AGG | + | chr6_4:81355143-81355162 | Msa0999390:CDS | 50.0% | |
| AGTTACCTTATTGCAGCCGG+TGG | + | chr6_4:81355908-81355927 | Msa0999390:CDS | 50.0% | |
| ! | GAGTTCCACCGGCTGCAATA+AGG | - | chr6_4:81355916-81355935 | None:intergenic | 55.0% |
| ! | GAGTTCCACCGGCTGCAATA+AGG | - | chr6_4:81355916-81355935 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 81355107 | 81355997 | 81355107 | ID=Msa0999390;Name=Msa0999390 |
| chr6_4 | mRNA | 81355107 | 81355997 | 81355107 | ID=Msa0999390-mRNA-1;Parent=Msa0999390;Name=Msa0999390-mRNA-1;_AED=0.52;_eAED=0.62;_QI=0|0|0|0.5|0|0|2|0|102 |
| chr6_4 | exon | 81355107 | 81355164 | 81355107 | ID=Msa0999390-mRNA-1:exon:15556;Parent=Msa0999390-mRNA-1 |
| chr6_4 | exon | 81355747 | 81355997 | 81355747 | ID=Msa0999390-mRNA-1:exon:15557;Parent=Msa0999390-mRNA-1 |
| chr6_4 | CDS | 81355107 | 81355164 | 81355107 | ID=Msa0999390-mRNA-1:cds;Parent=Msa0999390-mRNA-1 |
| chr6_4 | CDS | 81355747 | 81355997 | 81355747 | ID=Msa0999390-mRNA-1:cds;Parent=Msa0999390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
