Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292010 | A0A396GIY9 | 87.288 | 118 | 15 | 0 | 104 | 221 | 1 | 118 | 1.27e-66 | 216 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022640 | Msa1292010 | 0.808083 | 3.687234e-50 | -8.615850e-47 |
| Msa0682530 | Msa1292010 | 0.817873 | 2.630465e-52 | -8.615850e-47 |
| Msa0815320 | Msa1292010 | 0.805856 | 1.090714e-49 | -8.615850e-47 |
| Msa0161680 | Msa1292010 | 0.811243 | 7.717267e-51 | -8.615850e-47 |
| Msa1243020 | Msa1292010 | 0.809541 | 1.798552e-50 | -8.615850e-47 |
| Msa1271260 | Msa1292010 | 0.818341 | 2.061425e-52 | -8.615850e-47 |
| Msa1292010 | Msa1339440 | 0.806364 | 8.527346e-50 | -8.615850e-47 |
| Msa1292010 | Msa1351420 | 0.802113 | 6.544125e-49 | -8.615850e-47 |
| Msa1292010 | Msa1389050 | 0.806259 | 8.972897e-50 | -8.615850e-47 |
| Msa1292010 | Msa1424690 | 0.804705 | 1.900164e-49 | -8.615850e-47 |
| Msa0373960 | Msa1292010 | 0.825544 | 4.423430e-54 | -8.615850e-47 |
| Msa0412800 | Msa1292010 | 0.803579 | 3.259419e-49 | -8.615850e-47 |
| Msa0999340 | Msa1292010 | 0.825039 | 5.826443e-54 | -8.615850e-47 |
| Msa0999350 | Msa1292010 | 0.845250 | 4.566848e-59 | -8.615850e-47 |
| Msa0999360 | Msa1292010 | 0.802530 | 5.370184e-49 | -8.615850e-47 |
| Msa0999390 | Msa1292010 | 0.832043 | 1.183669e-55 | -8.615850e-47 |
| Msa0999400 | Msa1292010 | 0.838239 | 3.236361e-57 | -8.615850e-47 |
| Msa0999700 | Msa1292010 | 0.805088 | 1.580555e-49 | -8.615850e-47 |
| Msa1034680 | Msa1292010 | 0.809005 | 2.343425e-50 | -8.615850e-47 |
| Msa0899950 | Msa1292010 | 0.807547 | 4.791797e-50 | -8.615850e-47 |
| Msa0965310 | Msa1292010 | 0.809488 | 1.845821e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292010 | MtrunA17_Chr8g0362121 | 87.288 | 118 | 15 | 0 | 104 | 221 | 1 | 118 | 2.45e-70 | 216 |
| Msa1292010 | MtrunA17_Chr2g0281381 | 34.646 | 254 | 127 | 8 | 104 | 353 | 1 | 219 | 1.00e-31 | 127 |
| Msa1292010 | MtrunA17_Chr4g0027621 | 43.077 | 130 | 66 | 3 | 104 | 233 | 1 | 122 | 5.78e-29 | 111 |
| Msa1292010 | MtrunA17_Chr5g0421581 | 33.721 | 258 | 132 | 12 | 104 | 344 | 1 | 236 | 6.98e-28 | 110 |
| Msa1292010 | MtrunA17_Chr6g0462901 | 33.101 | 287 | 141 | 14 | 104 | 361 | 1 | 265 | 1.48e-25 | 108 |
| Msa1292010 | MtrunA17_Chr3g0101791 | 43.220 | 118 | 59 | 3 | 116 | 233 | 5 | 114 | 1.90e-25 | 101 |
| Msa1292010 | MtrunA17_Chr7g0235011 | 35.795 | 176 | 97 | 6 | 104 | 272 | 122 | 288 | 8.96e-25 | 104 |
| Msa1292010 | MtrunA17_Chr8g0362211 | 29.066 | 289 | 162 | 8 | 104 | 359 | 1 | 279 | 5.97e-24 | 100 |
| Msa1292010 | MtrunA17_Chr2g0303271 | 32.377 | 244 | 138 | 8 | 104 | 338 | 1 | 226 | 3.73e-23 | 97.8 |
| Msa1292010 | MtrunA17_Chr6g0465431 | 33.784 | 148 | 92 | 3 | 86 | 228 | 2 | 148 | 2.30e-22 | 93.6 |
| Msa1292010 | MtrunA17_Chr2g0297981 | 32.065 | 184 | 113 | 4 | 104 | 284 | 1 | 175 | 2.05e-21 | 90.9 |
| Msa1292010 | MtrunA17_Chr5g0430351 | 40.206 | 97 | 57 | 1 | 104 | 200 | 1 | 96 | 2.53e-20 | 85.1 |
| Msa1292010 | MtrunA17_Chr8g0356631 | 38.889 | 108 | 65 | 1 | 104 | 211 | 27 | 133 | 4.51e-20 | 90.1 |
| Msa1292010 | MtrunA17_Chr4g0049811 | 33.333 | 162 | 100 | 4 | 102 | 263 | 13 | 166 | 2.35e-19 | 85.1 |
| Msa1292010 | MtrunA17_Chr1g0176871 | 37.000 | 100 | 62 | 1 | 104 | 203 | 5 | 103 | 1.86e-16 | 74.7 |
| Msa1292010 | MtrunA17_Chr1g0171951 | 39.241 | 79 | 47 | 1 | 126 | 204 | 12 | 89 | 1.02e-13 | 71.6 |
| Msa1292010 | MtrunA17_Chr3g0081991 | 31.868 | 91 | 58 | 1 | 121 | 211 | 23 | 109 | 3.22e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 124 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACCCATTATTTCAAAAT+AGG | 0.155751 | 8_3:+47733630 | None:intergenic |
| TCCAATACCTTAATAATTTC+TGG | 0.164055 | 8_3:+47733439 | None:intergenic |
| ATTGATGAGGAGGGAGTTAA+TGG | 0.285300 | 8_3:-47732989 | Msa1292010:CDS |
| TCAAAATAGGGCCAGTAATC+TGG | 0.287675 | 8_3:+47733643 | None:intergenic |
| CAAACTATTGGTGAAGATAA+TGG | 0.293726 | 8_3:-47733295 | Msa1292010:CDS |
| TTGGGTGGGCTGCCTATTGT+AGG | 0.307217 | 8_3:+47735129 | None:intergenic |
| TTACCCATTATTTCAAAATA+GGG | 0.308042 | 8_3:+47733631 | None:intergenic |
| GGGTGTGGTAAGGAAGTTTA+TGG | 0.319996 | 8_3:-47733160 | Msa1292010:CDS |
| GAGGGAGTTAATGGTAATAA+TGG | 0.336569 | 8_3:-47732980 | Msa1292010:CDS |
| ACAGCAGAAAAGAATTTAGA+AGG | 0.339658 | 8_3:-47733181 | Msa1292010:CDS |
| ACCAGAAATTATTAAGGTAT+TGG | 0.341515 | 8_3:-47733440 | Msa1292010:CDS |
| CTCACAACCAGAAATTATTA+AGG | 0.354319 | 8_3:-47733446 | Msa1292010:CDS |
| TTATCCTCTGCCACATCATT+TGG | 0.355114 | 8_3:+47733385 | None:intergenic |
| ATAATTTCTGGTTGTGAGAC+TGG | 0.370218 | 8_3:+47733451 | None:intergenic |
| AGCCGTGAAGGTGGGCATAT+TGG | 0.370876 | 8_3:+47735202 | None:intergenic |
| GTCTCCACTCCAGCTTCAGT+GGG | 0.378450 | 8_3:+47733349 | None:intergenic |
| GTGCTCAATGACAACTTTGA+TGG | 0.393924 | 8_3:-47733013 | Msa1292010:CDS |
| CTTCCATTTCTTAATGAAGA+AGG | 0.402039 | 8_3:+47735066 | None:intergenic |
| GATCCTTCTTCATTAAGAAA+TGG | 0.407397 | 8_3:-47735069 | Msa1292010:CDS |
| TGTACCAGGTGAAGGAGGTT+TGG | 0.409408 | 8_3:+47735110 | None:intergenic |
| AAACTATTGGTGAAGATAAT+GGG | 0.412148 | 8_3:-47733294 | Msa1292010:CDS |
| AATGGAAGGTGCTCACCTTC+GGG | 0.412981 | 8_3:-47735051 | Msa1292010:intron |
| GACATTGGGCTAGATGAAAA+TGG | 0.413758 | 8_3:-47733220 | Msa1292010:CDS |
| GGAAGTTTATGGTGTTAGTA+AGG | 0.418675 | 8_3:-47733149 | Msa1292010:CDS |
| TGGGCCACATGTGGGTGAAC+AGG | 0.419673 | 8_3:-47733275 | Msa1292010:CDS |
| AAATGGAAGGTGCTCACCTT+CGG | 0.419911 | 8_3:-47735052 | Msa1292010:CDS |
| TTTCTTAATGAAGAAGGATC+TGG | 0.427761 | 8_3:+47735072 | None:intergenic |
| ACCATCTCTTCAGCCATGTA+AGG | 0.430260 | 8_3:+47733559 | None:intergenic |
| TGAGGTGGTGGTTCACCACC+AGG | 0.430748 | 8_3:-47733728 | Msa1292010:CDS |
| GGTGTGGGCCCCACTGAAGC+TGG | 0.432996 | 8_3:-47733358 | Msa1292010:CDS |
| GTACCAGGTGAAGGAGGTTT+GGG | 0.436790 | 8_3:+47735111 | None:intergenic |
| AGGAACATGATACATGTTCT+AGG | 0.440859 | 8_3:-47733528 | Msa1292010:CDS |
| AAGGTATTGGAGTATAATGT+AGG | 0.450090 | 8_3:-47733427 | Msa1292010:CDS |
| GAAAATGTTGGGCAAACTAT+TGG | 0.452004 | 8_3:-47733307 | Msa1292010:CDS |
| TTTGGTTCTTCAACAACAAT+GGG | 0.454710 | 8_3:+47733403 | None:intergenic |
| GGTTGTGTGATCCAGATTAC+TGG | 0.457934 | 8_3:-47733654 | Msa1292010:CDS |
| CATGTGGGTGAACAGGAAGC+TGG | 0.458900 | 8_3:-47733268 | Msa1292010:CDS |
| CCAGGTGAAGGAGGTTTGGG+TGG | 0.461957 | 8_3:+47735114 | None:intergenic |
| AGGAAGCTGGGCCAACTGTT+GGG | 0.464053 | 8_3:-47733255 | Msa1292010:CDS |
| CCCACGACGCCTCCTACAAT+AGG | 0.468117 | 8_3:-47735141 | Msa1292010:CDS |
| TTGGTCCCACTGAAAATGTT+GGG | 0.470591 | 8_3:-47733318 | Msa1292010:CDS |
| GGAGGATAAGTTTGAGGTGG+TGG | 0.471442 | 8_3:-47733740 | Msa1292010:CDS |
| GCAGAGGCTTCTGTTACTAA+AGG | 0.471876 | 8_3:-47732917 | Msa1292010:CDS |
| CTCCAATATGCCCACCTTCA+CGG | 0.476575 | 8_3:-47735204 | Msa1292010:CDS |
| CAGGAAGCTGGGCCAACTGT+TGG | 0.480176 | 8_3:-47733256 | Msa1292010:CDS |
| GGCTAGATGACATTGACATT+GGG | 0.482212 | 8_3:-47733234 | Msa1292010:CDS |
| AATGGTAATAATGGTGATGA+AGG | 0.484400 | 8_3:-47732971 | Msa1292010:CDS |
| TGTCTCCACTCCAGCTTCAG+TGG | 0.491239 | 8_3:+47733348 | None:intergenic |
| CCTCCTTCACCTGGTACACT+AGG | 0.503695 | 8_3:-47735105 | Msa1292010:CDS |
| TTTGGTCCCACTGAAAATGT+TGG | 0.506549 | 8_3:-47733319 | Msa1292010:CDS |
| ATTTGGTTCTTCAACAACAA+TGG | 0.508868 | 8_3:+47733402 | None:intergenic |
| GATTTGTGGGCGAGTTGTGA+TGG | 0.511070 | 8_3:-47733761 | Msa1292010:CDS |
| TTTGTATTATGACCCTTACA+TGG | 0.516411 | 8_3:-47733572 | Msa1292010:CDS |
| GAAAAGAATTTAGAAGGGTG+TGG | 0.517978 | 8_3:-47733175 | Msa1292010:CDS |
| CGTGAAGGTGGGCATATTGG+AGG | 0.523018 | 8_3:+47735205 | None:intergenic |
| TCAGCACTTTAAAGTACCCC+TGG | 0.526036 | 8_3:+47733710 | None:intergenic |
| TGTGATGGAGGATAAGTTTG+AGG | 0.532264 | 8_3:-47733746 | Msa1292010:CDS |
| TGGGAGGACAGCCGTGAAGG+TGG | 0.533270 | 8_3:+47735193 | None:intergenic |
| GCGATTCACCGATCGAAACC+AGG | 0.539554 | 8_3:-47734187 | Msa1292010:intron |
| CAGGTGAAGGAGGTTTGGGT+GGG | 0.540199 | 8_3:+47735115 | None:intergenic |
| CTTTGATGGTATTGATGAGG+AGG | 0.541417 | 8_3:-47732999 | Msa1292010:CDS |
| TTGTGGGCGAGTTGTGATGG+AGG | 0.541914 | 8_3:-47733758 | Msa1292010:CDS |
| ATGTGGGTGAACAGGAAGCT+GGG | 0.545008 | 8_3:-47733267 | Msa1292010:CDS |
| GGGCCCCACTGAAGCTGGAG+TGG | 0.545439 | 8_3:-47733353 | Msa1292010:CDS |
| GAATTTAGAAGGGTGTGGTA+AGG | 0.546944 | 8_3:-47733170 | Msa1292010:CDS |
| AGGTGGTGGTTCACCACCAG+GGG | 0.551202 | 8_3:-47733726 | Msa1292010:CDS |
| GGGCTAGATGACATTGACAT+TGG | 0.554253 | 8_3:-47733235 | Msa1292010:CDS |
| CCCTTACATGGCTGAAGAGA+TGG | 0.557272 | 8_3:-47733560 | Msa1292010:CDS |
| GGAGTGGAGACAGAAACATT+TGG | 0.562791 | 8_3:-47733337 | Msa1292010:CDS |
| GCCTATTGTAGGAGGCGTCG+TGG | 0.564192 | 8_3:+47735140 | None:intergenic |
| TGAAGAGATGGTGTTGTTGA+AGG | 0.565931 | 8_3:-47733548 | Msa1292010:CDS |
| CCACCCAAACCTCCTTCACC+TGG | 0.566494 | 8_3:-47735114 | Msa1292010:CDS |
| AGATTAAACCTGGTTTCGAT+CGG | 0.566924 | 8_3:+47734179 | None:intergenic |
| TCGTGGGAGGACAGCCGTGA+AGG | 0.567702 | 8_3:+47735190 | None:intergenic |
| GGGAGGACAGCCGTGAAGGT+GGG | 0.568513 | 8_3:+47735194 | None:intergenic |
| GTAACAGAAGCCTCTGCAGA+AGG | 0.569096 | 8_3:+47732923 | None:intergenic |
| AGGTATTGGAGTATAATGTA+GGG | 0.569854 | 8_3:-47733426 | Msa1292010:CDS |
| GCTTCCTGTTCACCCACATG+TGG | 0.571400 | 8_3:+47733271 | None:intergenic |
| ACAGAAGCCTCTGCAGAAGG+TGG | 0.573345 | 8_3:+47732926 | None:intergenic |
| GTGCCTAGTGTACCAGGTGA+AGG | 0.574507 | 8_3:+47735102 | None:intergenic |
| AGAACCAAATGATGTGGCAG+AGG | 0.578874 | 8_3:-47733389 | Msa1292010:CDS |
| AATGAAGAAGGATCTGGAGG+AGG | 0.580725 | 8_3:+47735078 | None:intergenic |
| CTTCTTCATTAAGAAATGGA+AGG | 0.581427 | 8_3:-47735065 | Msa1292010:CDS |
| CCTATTGTAGGAGGCGTCGT+GGG | 0.582441 | 8_3:+47735141 | None:intergenic |
| TAATTTCTGGTTGTGAGACT+GGG | 0.583690 | 8_3:+47733452 | None:intergenic |
| TATAGCACAATCTGAAGGAA+AGG | 0.586681 | 8_3:-47733494 | Msa1292010:CDS |
| TGCAGACCCACCTTCTGCAG+AGG | 0.589630 | 8_3:-47732933 | Msa1292010:CDS |
| ACATAAAACCAGAAGACGAA+AGG | 0.594822 | 8_3:-47734261 | Msa1292010:CDS |
| GGACTAGTGCCTACTGTAGG+AGG | 0.596151 | 8_3:+47735165 | None:intergenic |
| GCAGAGGATAATGTTGGTGT+GGG | 0.596903 | 8_3:-47733373 | Msa1292010:CDS |
| ACAAAGGTGATGAGATTACA+TGG | 0.598430 | 8_3:-47733675 | Msa1292010:CDS |
| CAGCAGAAAAGAATTTAGAA+GGG | 0.600076 | 8_3:-47733180 | Msa1292010:CDS |
| GGTGGGCTGCCTATTGTAGG+AGG | 0.601120 | 8_3:+47735132 | None:intergenic |
| ATTGTAGGAGGCGTCGTGGG+AGG | 0.603641 | 8_3:+47735144 | None:intergenic |
| CCATCTCTTCAGCCATGTAA+GGG | 0.604058 | 8_3:+47733560 | None:intergenic |
| GGCAGAGGATAATGTTGGTG+TGG | 0.610126 | 8_3:-47733374 | Msa1292010:CDS |
| GAGGTGGTGGTTCACCACCA+GGG | 0.612253 | 8_3:-47733727 | Msa1292010:CDS |
| CAAGCTATAGCACAATCTGA+AGG | 0.617855 | 8_3:-47733499 | Msa1292010:CDS |
| AACATGATACATGTTCTAGG+AGG | 0.618800 | 8_3:-47733525 | Msa1292010:CDS |
| CCTAGTGTACCAGGTGAAGG+AGG | 0.618920 | 8_3:+47735105 | None:intergenic |
| CTTAATGAAGAAGGATCTGG+AGG | 0.620570 | 8_3:+47735075 | None:intergenic |
| TAAGGTAAAAGACAAGGGCA+AGG | 0.620794 | 8_3:-47733131 | Msa1292010:CDS |
| TGTTAGTAAGGTAAAAGACA+AGG | 0.625683 | 8_3:-47733137 | Msa1292010:CDS |
| TTTGATGGTATTGATGAGGA+GGG | 0.627964 | 8_3:-47732998 | Msa1292010:CDS |
| CAGAAGCCTCTGCAGAAGGT+GGG | 0.630530 | 8_3:+47732927 | None:intergenic |
| ACTGTAGGAGGCATCGTGGG+AGG | 0.633982 | 8_3:+47735177 | None:intergenic |
| ACATGATACATGTTCTAGGA+GGG | 0.634279 | 8_3:-47733524 | Msa1292010:CDS |
| TGAAGATAATGGGCCACATG+TGG | 0.639569 | 8_3:-47733284 | Msa1292010:CDS |
| GTTAGTAAGGTAAAAGACAA+GGG | 0.645365 | 8_3:-47733136 | Msa1292010:CDS |
| CAACTTTGATGGTATTGATG+AGG | 0.648807 | 8_3:-47733002 | Msa1292010:CDS |
| ATGTCATCTAGCCCAACAGT+TGG | 0.652408 | 8_3:+47733244 | None:intergenic |
| TCTCCACTCCAGCTTCAGTG+GGG | 0.654850 | 8_3:+47733350 | None:intergenic |
| CCCACGATGCCTCCTACAGT+AGG | 0.659459 | 8_3:-47735174 | Msa1292010:CDS |
| CCTACTGTAGGAGGCATCGT+GGG | 0.660575 | 8_3:+47735174 | None:intergenic |
| GGAGGACTAGTGCCTACTGT+AGG | 0.670577 | 8_3:+47735162 | None:intergenic |
| GAAGATAATGGGCCACATGT+GGG | 0.677439 | 8_3:-47733283 | Msa1292010:CDS |
| GCCTACTGTAGGAGGCATCG+TGG | 0.685025 | 8_3:+47735173 | None:intergenic |
| GGTAAAAGACAAGGGCAAGG+AGG | 0.686134 | 8_3:-47733128 | Msa1292010:CDS |
| CTGGGAGAAGAGGAAAACGA+AGG | 0.686241 | 8_3:-47734224 | Msa1292010:CDS |
| GATGGAGGATAAGTTTGAGG+TGG | 0.691883 | 8_3:-47733743 | Msa1292010:CDS |
| TGTTGAAGAACCAAATGATG+TGG | 0.693762 | 8_3:-47733395 | Msa1292010:CDS |
| GCACTTTAAAGTACCCCTGG+TGG | 0.701167 | 8_3:+47733713 | None:intergenic |
| GATGTGGCAGAGGATAATGT+TGG | 0.704468 | 8_3:-47733379 | Msa1292010:CDS |
| CTGAAGCATGATGAATACAA+AGG | 0.732106 | 8_3:-47733691 | Msa1292010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTTTTTTTTTTTTTG+TGG | + | chr8_3:47732919-47732938 | None:intergenic | 10.0% |
| !!! | ATTTACATTTCTTTTTTTTT+TGG | + | chr8_3:47733684-47733703 | None:intergenic | 10.0% |
| !!! | AACTAAAAATTGATTTATTT+TGG | - | chr8_3:47733970-47733989 | Msa1292010:intron | 10.0% |
| !! | TTATACAAAATATTAAATAG+TGG | - | chr8_3:47734598-47734617 | Msa1292010:intron | 10.0% |
| !!! | TTGTATATATTTGTTTTATT+AGG | - | chr8_3:47734641-47734660 | Msa1292010:intron | 10.0% |
| !! | ATTTATGAAGATATCATTAT+AGG | - | chr8_3:47733170-47733189 | Msa1292010:CDS | 15.0% |
| !! | ACAATTAAATAACATAAAGA+AGG | - | chr8_3:47733776-47733795 | Msa1292010:intron | 15.0% |
| !!! | ATTTTAAAGGGTTATTTTAA+AGG | + | chr8_3:47733871-47733890 | None:intergenic | 15.0% |
| !!! | ATAAATCAATTTTTAGTTAG+AGG | + | chr8_3:47733968-47733987 | None:intergenic | 15.0% |
| !! | CAGAATTTGAATAAAATTAA+CGG | + | chr8_3:47734034-47734053 | None:intergenic | 15.0% |
| !!! | AATTTTATTCAAATTCTGTT+AGG | - | chr8_3:47734036-47734055 | Msa1292010:intron | 15.0% |
| !!! | ATTTTATTCAAATTCTGTTA+GGG | - | chr8_3:47734037-47734056 | Msa1292010:intron | 15.0% |
| !!! | AATTTAGGATTACTTTTTTT+GGG | - | chr8_3:47734433-47734452 | Msa1292010:intron | 15.0% |
| !! | TGGAAAGAATTATAATCATT+CGG | - | chr8_3:47732944-47732963 | Msa1292010:CDS | 20.0% |
| !! | TATGTTCTACAGAATATATA+TGG | - | chr8_3:47733119-47733138 | Msa1292010:CDS | 20.0% |
| !! | GAATATATATGGTTATTAGT+AGG | - | chr8_3:47733130-47733149 | Msa1292010:CDS | 20.0% |
| !! | GATTCAAACAAAATTTCATA+TGG | + | chr8_3:47733557-47733576 | None:intergenic | 20.0% |
| !! | TCTAACTATTTAATTGGTAT+CGG | - | chr8_3:47733936-47733955 | Msa1292010:intron | 20.0% |
| !!! | TTAAACGAAATTTGGATTTT+AGG | - | chr8_3:47734304-47734323 | Msa1292010:intron | 20.0% |
| !!! | TAAACGAAATTTGGATTTTA+GGG | - | chr8_3:47734305-47734324 | Msa1292010:intron | 20.0% |
| !!! | TAAACGAAAATTTGGAATTT+AGG | - | chr8_3:47734418-47734437 | Msa1292010:intron | 20.0% |
| !!! | GAATTTAGGATTACTTTTTT+TGG | - | chr8_3:47734432-47734451 | Msa1292010:intron | 20.0% |
| !!! | ATTTGTTTTATTAGGATTTG+TGG | - | chr8_3:47734649-47734668 | Msa1292010:intron | 20.0% |
| !!! | TTTGTTTTATTAGGATTTGT+GGG | - | chr8_3:47734650-47734669 | Msa1292010:intron | 20.0% |
| !! | TTACCCATTATTTCAAAATA+GGG | + | chr8_3:47734796-47734815 | None:intergenic | 20.0% |
| !! | ATTACCCATTATTTCAAAAT+AGG | + | chr8_3:47734797-47734816 | None:intergenic | 20.0% |
| ! | AAAGAATTATAATCATTCGG+TGG | - | chr8_3:47732947-47732966 | Msa1292010:CDS | 25.0% |
| ! | ACAAGAATAAGATACTTGTA+AGG | + | chr8_3:47733096-47733115 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTTTTTTTGGTC+AGG | + | chr8_3:47733679-47733698 | None:intergenic | 25.0% |
| ! | TTTGCGTTAACTTAAATAAC+CGG | - | chr8_3:47733706-47733725 | Msa1292010:CDS | 25.0% |
| !! | ATGCACTCGAAAATTTTAAA+GGG | + | chr8_3:47733883-47733902 | None:intergenic | 25.0% |
| !! | AATGCACTCGAAAATTTTAA+AGG | + | chr8_3:47733884-47733903 | None:intergenic | 25.0% |
| !! | TCGAGTGCATTAATTATTTT+TGG | - | chr8_3:47733893-47733912 | Msa1292010:intron | 25.0% |
| !!! | TTTTGGCTTAATTACCTTTT+TGG | - | chr8_3:47733910-47733929 | Msa1292010:intron | 25.0% |
| ! | GATACCAATTAAATAGTTAG+AGG | + | chr8_3:47733937-47733956 | None:intergenic | 25.0% |
| ! | TTTGAATAAAATTAACGGAG+AGG | + | chr8_3:47734029-47734048 | None:intergenic | 25.0% |
| !!! | GATTTTAGGGTTACTTTTTT+GGG | - | chr8_3:47734318-47734337 | Msa1292010:intron | 25.0% |
| ! | GTTTGGATTAAACGAAAATT+TGG | - | chr8_3:47734410-47734429 | Msa1292010:intron | 25.0% |
| !!! | GTTTTAGGGATTTTTGTTTA+TGG | - | chr8_3:47734481-47734500 | Msa1292010:intron | 25.0% |
| !!! | TTTTTAACCTTTGTTGTATG+CGG | - | chr8_3:47734553-47734572 | Msa1292010:intron | 25.0% |
| ! | ACCAGAAATTATTAAGGTAT+TGG | - | chr8_3:47734984-47735003 | Msa1292010:intron | 25.0% |
| ! | TCCAATACCTTAATAATTTC+TGG | + | chr8_3:47734988-47735007 | None:intergenic | 25.0% |
| ! | AAACTATTGGTGAAGATAAT+GGG | - | chr8_3:47735130-47735149 | Msa1292010:CDS | 25.0% |
| AAGAAAAAGATACTGTTGTG+AGG | + | chr8_3:47733060-47733079 | None:intergenic | 30.0% | |
| TTTCTTAATGAAGAAGGATC+TGG | + | chr8_3:47733355-47733374 | None:intergenic | 30.0% | |
| GATCCTTCTTCATTAAGAAA+TGG | - | chr8_3:47733355-47733374 | Msa1292010:CDS | 30.0% | |
| CTTCCATTTCTTAATGAAGA+AGG | + | chr8_3:47733361-47733380 | None:intergenic | 30.0% | |
| CTTCTTCATTAAGAAATGGA+AGG | - | chr8_3:47733359-47733378 | Msa1292010:CDS | 30.0% | |
| AATCTTATACAACTGAGATG+TGG | - | chr8_3:47733573-47733592 | Msa1292010:CDS | 30.0% | |
| ! | TTTTACTGCTTAGATTCTTC+CGG | + | chr8_3:47733728-47733747 | None:intergenic | 30.0% |
| AAATAGTTAGAGGACCAAAA+AGG | + | chr8_3:47733927-47733946 | None:intergenic | 30.0% | |
| TGGTCCTCTAACTATTTAAT+TGG | - | chr8_3:47733930-47733949 | Msa1292010:intron | 30.0% | |
| !! | CTATTTAATTGGTATCGGTT+TGG | - | chr8_3:47733941-47733960 | Msa1292010:intron | 30.0% |
| !! | AAAGGAAAACGAACTTTTTC+TGG | - | chr8_3:47734181-47734200 | Msa1292010:intron | 30.0% |
| !! | AAGGAAAACGAACTTTTTCT+GGG | - | chr8_3:47734182-47734201 | Msa1292010:intron | 30.0% |
| AAAGAGATAGAGATTAAACC+TGG | + | chr8_3:47734258-47734277 | None:intergenic | 30.0% | |
| ! | TTTGATTTCGTATTGCTGTT+TGG | - | chr8_3:47734280-47734299 | Msa1292010:intron | 30.0% |
| !! | TTGATTTCGTATTGCTGTTT+GGG | - | chr8_3:47734281-47734300 | Msa1292010:intron | 30.0% |
| ! | TGTTTGGGTTAAACGAAATT+TGG | - | chr8_3:47734296-47734315 | Msa1292010:intron | 30.0% |
| !!! | GGATTTTAGGGTTACTTTTT+TGG | - | chr8_3:47734317-47734336 | Msa1292010:intron | 30.0% |
| !!! | TGGGTTATTGTTTTTGAATC+TGG | - | chr8_3:47734337-47734356 | Msa1292010:intron | 30.0% |
| !!! | TTGTTTTTGAATCTGGTTTC+TGG | - | chr8_3:47734344-47734363 | Msa1292010:intron | 30.0% |
| ! | TTTGATTTCGTATTGCTGTT+TGG | - | chr8_3:47734280-47734299 | Msa1292010:intron | 30.0% |
| !!! | AGGATTACTTTTTTTGGGTT+AGG | - | chr8_3:47734438-47734457 | Msa1292010:intron | 30.0% |
| !!! | GGATTACTTTTTTTGGGTTA+GGG | - | chr8_3:47734439-47734458 | Msa1292010:intron | 30.0% |
| !!! | TGAATATGGTTTCTGGTTTT+AGG | - | chr8_3:47734466-47734485 | Msa1292010:intron | 30.0% |
| !!! | GAATATGGTTTCTGGTTTTA+GGG | - | chr8_3:47734467-47734486 | Msa1292010:intron | 30.0% |
| !! | GGATTTTTGTTTATGGTATC+TGG | - | chr8_3:47734488-47734507 | Msa1292010:intron | 30.0% |
| ! | TTGTTTATGGTATCTGGTTT+AGG | - | chr8_3:47734494-47734513 | Msa1292010:intron | 30.0% |
| ! | TGTTTATGGTATCTGGTTTA+GGG | - | chr8_3:47734495-47734514 | Msa1292010:intron | 30.0% |
| !!! | TGGCCCTATTTTGAAATAAT+GGG | - | chr8_3:47734790-47734809 | Msa1292010:intron | 30.0% |
| ! | ATGGGTAATCTTGAAGTTTT+AGG | - | chr8_3:47734808-47734827 | Msa1292010:intron | 30.0% |
| ! | TGGGTAATCTTGAAGTTTTA+GGG | - | chr8_3:47734809-47734828 | Msa1292010:intron | 30.0% |
| !!! | TCTTGAAGTTTTAGGGTATA+AGG | - | chr8_3:47734816-47734835 | Msa1292010:intron | 30.0% |
| TTTGTATTATGACCCTTACA+TGG | - | chr8_3:47734852-47734871 | Msa1292010:intron | 30.0% | |
| CTCACAACCAGAAATTATTA+AGG | - | chr8_3:47734978-47734997 | Msa1292010:intron | 30.0% | |
| !! | AAGGTATTGGAGTATAATGT+AGG | - | chr8_3:47734997-47735016 | Msa1292010:intron | 30.0% |
| !! | AGGTATTGGAGTATAATGTA+GGG | - | chr8_3:47734998-47735017 | Msa1292010:intron | 30.0% |
| !! | TTTGGTTCTTCAACAACAAT+GGG | + | chr8_3:47735024-47735043 | None:intergenic | 30.0% |
| !! | ATTTGGTTCTTCAACAACAA+TGG | + | chr8_3:47735025-47735044 | None:intergenic | 30.0% |
| CAAACTATTGGTGAAGATAA+TGG | - | chr8_3:47735129-47735148 | Msa1292010:CDS | 30.0% | |
| ACAGCAGAAAAGAATTTAGA+AGG | - | chr8_3:47735243-47735262 | Msa1292010:intron | 30.0% | |
| CAGCAGAAAAGAATTTAGAA+GGG | - | chr8_3:47735244-47735263 | Msa1292010:intron | 30.0% | |
| TGTTAGTAAGGTAAAAGACA+AGG | - | chr8_3:47735287-47735306 | Msa1292010:intron | 30.0% | |
| GTTAGTAAGGTAAAAGACAA+GGG | - | chr8_3:47735288-47735307 | Msa1292010:intron | 30.0% | |
| !!! | TTTTTGTGTTGAGTTGAATG+AGG | - | chr8_3:47735338-47735357 | Msa1292010:intron | 30.0% |
| ! | GCTTATGACATTCATTTTGA+AGG | - | chr8_3:47735375-47735394 | Msa1292010:intron | 30.0% |
| ! | AATGGTAATAATGGTGATGA+AGG | - | chr8_3:47735453-47735472 | Msa1292010:intron | 30.0% |
| TGGTTTCAAGATTCATGAGA+CGG | - | chr8_3:47733593-47733612 | Msa1292010:CDS | 35.0% | |
| ACATAAAACCAGAAGACGAA+AGG | - | chr8_3:47734163-47734182 | Msa1292010:intron | 35.0% | |
| AGATTAAACCTGGTTTCGAT+CGG | + | chr8_3:47734248-47734267 | None:intergenic | 35.0% | |
| !! | TGGGTTAGGGTTTTTGAATA+TGG | - | chr8_3:47734452-47734471 | Msa1292010:intron | 35.0% |
| ! | GGGTTTTTGAATATGGTTTC+TGG | - | chr8_3:47734459-47734478 | Msa1292010:intron | 35.0% |
| !! | CTGGTTTAGGGTTTTATGTT+CGG | - | chr8_3:47734507-47734526 | Msa1292010:intron | 35.0% |
| !! | TAGGGTTTTATGTTCGGTTT+AGG | - | chr8_3:47734513-47734532 | Msa1292010:intron | 35.0% |
| !! | AGGGTTTTATGTTCGGTTTA+GGG | - | chr8_3:47734514-47734533 | Msa1292010:intron | 35.0% |
| CTGAAGCATGATGAATACAA+AGG | - | chr8_3:47734733-47734752 | Msa1292010:intron | 35.0% | |
| ACAAAGGTGATGAGATTACA+TGG | - | chr8_3:47734749-47734768 | Msa1292010:intron | 35.0% | |
| !!! | CTGGCCCTATTTTGAAATAA+TGG | - | chr8_3:47734789-47734808 | Msa1292010:intron | 35.0% |
| !!! | AGTTTTAGGGTATAAGGATG+TGG | - | chr8_3:47734822-47734841 | Msa1292010:intron | 35.0% |
| AGGAACATGATACATGTTCT+AGG | - | chr8_3:47734896-47734915 | Msa1292010:intron | 35.0% | |
| ! | AACATGATACATGTTCTAGG+AGG | - | chr8_3:47734899-47734918 | Msa1292010:intron | 35.0% |
| !! | ACATGATACATGTTCTAGGA+GGG | - | chr8_3:47734900-47734919 | Msa1292010:intron | 35.0% |
| TATAGCACAATCTGAAGGAA+AGG | - | chr8_3:47734930-47734949 | Msa1292010:intron | 35.0% | |
| !! | TAATTTCTGGTTGTGAGACT+GGG | + | chr8_3:47734975-47734994 | None:intergenic | 35.0% |
| !! | ATAATTTCTGGTTGTGAGAC+TGG | + | chr8_3:47734976-47734995 | None:intergenic | 35.0% |
| TGTTGAAGAACCAAATGATG+TGG | - | chr8_3:47735029-47735048 | Msa1292010:intron | 35.0% | |
| GAAAATGTTGGGCAAACTAT+TGG | - | chr8_3:47735117-47735136 | Msa1292010:CDS | 35.0% | |
| GAAAAGAATTTAGAAGGGTG+TGG | - | chr8_3:47735249-47735268 | Msa1292010:intron | 35.0% | |
| ! | GGAAGTTTATGGTGTTAGTA+AGG | - | chr8_3:47735275-47735294 | Msa1292010:intron | 35.0% |
| !! | TGACATTCATTTTGAAGGTG+AGG | - | chr8_3:47735380-47735399 | Msa1292010:intron | 35.0% |
| !! | CAACTTTGATGGTATTGATG+AGG | - | chr8_3:47735422-47735441 | Msa1292010:intron | 35.0% |
| !! | TTTGATGGTATTGATGAGGA+GGG | - | chr8_3:47735426-47735445 | Msa1292010:intron | 35.0% |
| GAGGGAGTTAATGGTAATAA+TGG | - | chr8_3:47735444-47735463 | Msa1292010:intron | 35.0% | |
| CTTAATGAAGAAGGATCTGG+AGG | + | chr8_3:47733352-47733371 | None:intergenic | 40.0% | |
| AATCGTGATTCTGTGGATGT+TGG | + | chr8_3:47733454-47733473 | None:intergenic | 40.0% | |
| ! | ATTGCTCTCTTTGTGCTGTT+GGG | + | chr8_3:47733514-47733533 | None:intergenic | 40.0% |
| GGTTTCAAGATTCATGAGAC+GGG | - | chr8_3:47733594-47733613 | Msa1292010:CDS | 40.0% | |
| GAGACGGGTATTTATAGCAA+TGG | - | chr8_3:47733609-47733628 | Msa1292010:CDS | 40.0% | |
| AGTAACGGTCACAAACTTAG+AGG | + | chr8_3:47733997-47734016 | None:intergenic | 40.0% | |
| GAGAGGACGAAATGTAGTAA+CGG | + | chr8_3:47734012-47734031 | None:intergenic | 40.0% | |
| TGTTAGGGTTTGTGTCATGT+GGG | - | chr8_3:47734052-47734071 | Msa1292010:intron | 40.0% | |
| ! | TTCGTTTTCCTTTCGTCTTC+TGG | + | chr8_3:47734174-47734193 | None:intergenic | 40.0% |
| ! | TAACCTTTGTTGTATGCGGT+TGG | - | chr8_3:47734557-47734576 | Msa1292010:intron | 40.0% |
| ! | TGTGATGGAGGATAAGTTTG+AGG | - | chr8_3:47734678-47734697 | Msa1292010:intron | 40.0% |
| TCAAAATAGGGCCAGTAATC+TGG | + | chr8_3:47734784-47734803 | None:intergenic | 40.0% | |
| !! | TGAAGAGATGGTGTTGTTGA+AGG | - | chr8_3:47734876-47734895 | Msa1292010:intron | 40.0% |
| CAAGCTATAGCACAATCTGA+AGG | - | chr8_3:47734925-47734944 | Msa1292010:intron | 40.0% | |
| TTATCCTCTGCCACATCATT+TGG | + | chr8_3:47735042-47735061 | None:intergenic | 40.0% | |
| TTTGGTCCCACTGAAAATGT+TGG | - | chr8_3:47735105-47735124 | Msa1292010:CDS | 40.0% | |
| TTGGTCCCACTGAAAATGTT+GGG | - | chr8_3:47735106-47735125 | Msa1292010:CDS | 40.0% | |
| ! | GTTTGCCCAACATTTTCAGT+GGG | + | chr8_3:47735114-47735133 | None:intergenic | 40.0% |
| ! | AGTTTGCCCAACATTTTCAG+TGG | + | chr8_3:47735115-47735134 | None:intergenic | 40.0% |
| GGCTAGATGACATTGACATT+GGG | - | chr8_3:47735190-47735209 | Msa1292010:CDS | 40.0% | |
| ! | GACATTGGGCTAGATGAAAA+TGG | - | chr8_3:47735204-47735223 | Msa1292010:CDS | 40.0% |
| ! | GAATTTAGAAGGGTGTGGTA+AGG | - | chr8_3:47735254-47735273 | Msa1292010:intron | 40.0% |
| TAAGGTAAAAGACAAGGGCA+AGG | - | chr8_3:47735293-47735312 | Msa1292010:intron | 40.0% | |
| GTGCTCAATGACAACTTTGA+TGG | - | chr8_3:47735411-47735430 | Msa1292010:intron | 40.0% | |
| !! | CTTTGATGGTATTGATGAGG+AGG | - | chr8_3:47735425-47735444 | Msa1292010:intron | 40.0% |
| ATTGATGAGGAGGGAGTTAA+TGG | - | chr8_3:47735435-47735454 | Msa1292010:intron | 40.0% | |
| TAGGCTTAGTGATGACCATC+AGG | - | chr8_3:47733189-47733208 | Msa1292010:CDS | 45.0% | |
| ! | ATTGGAGGACTAGTACCTGA+TGG | + | chr8_3:47733207-47733226 | None:intergenic | 45.0% |
| AATGAAGAAGGATCTGGAGG+AGG | + | chr8_3:47733349-47733368 | None:intergenic | 45.0% | |
| !! | AAATGGAAGGTGCTCACCTT+CGG | - | chr8_3:47733372-47733391 | Msa1292010:CDS | 45.0% |
| CTACGACAATCGTGATTCTG+TGG | + | chr8_3:47733461-47733480 | None:intergenic | 45.0% | |
| CATTGCTCTCTTTGTGCTGT+TGG | + | chr8_3:47733515-47733534 | None:intergenic | 45.0% | |
| CTGTTAGGGTTTGTGTCATG+TGG | - | chr8_3:47734051-47734070 | Msa1292010:intron | 45.0% | |
| TTTGTGTCATGTGGGTACCA+GGG | - | chr8_3:47734060-47734079 | Msa1292010:intron | 45.0% | |
| ATTATCTGCCAAATCAGCCC+TGG | + | chr8_3:47734080-47734099 | None:intergenic | 45.0% | |
| !! | CGAACTTTTTCTGGGAGAAG+AGG | - | chr8_3:47734190-47734209 | Msa1292010:CDS | 45.0% |
| !! | TTGTATGCGGTTGGTGGTTT+AGG | - | chr8_3:47734566-47734585 | Msa1292010:intron | 45.0% |
| !! | TGTATGCGGTTGGTGGTTTA+GGG | - | chr8_3:47734567-47734586 | Msa1292010:intron | 45.0% |
| GATGGAGGATAAGTTTGAGG+TGG | - | chr8_3:47734681-47734700 | Msa1292010:intron | 45.0% | |
| !! | TCAGCACTTTAAAGTACCCC+TGG | + | chr8_3:47734717-47734736 | None:intergenic | 45.0% |
| GGTTGTGTGATCCAGATTAC+TGG | - | chr8_3:47734770-47734789 | Msa1292010:intron | 45.0% | |
| CCATCTCTTCAGCCATGTAA+GGG | + | chr8_3:47734867-47734886 | None:intergenic | 45.0% | |
| ACCATCTCTTCAGCCATGTA+AGG | + | chr8_3:47734868-47734887 | None:intergenic | 45.0% | |
| AGAACCAAATGATGTGGCAG+AGG | - | chr8_3:47735035-47735054 | Msa1292010:intron | 45.0% | |
| GATGTGGCAGAGGATAATGT+TGG | - | chr8_3:47735045-47735064 | Msa1292010:intron | 45.0% | |
| GCAGAGGATAATGTTGGTGT+GGG | - | chr8_3:47735051-47735070 | Msa1292010:intron | 45.0% | |
| GGAGTGGAGACAGAAACATT+TGG | - | chr8_3:47735087-47735106 | Msa1292010:CDS | 45.0% | |
| !! | TGAAGATAATGGGCCACATG+TGG | - | chr8_3:47735140-47735159 | Msa1292010:CDS | 45.0% |
| !! | GAAGATAATGGGCCACATGT+GGG | - | chr8_3:47735141-47735160 | Msa1292010:CDS | 45.0% |
| ATGTCATCTAGCCCAACAGT+TGG | + | chr8_3:47735183-47735202 | None:intergenic | 45.0% | |
| GGGCTAGATGACATTGACAT+TGG | - | chr8_3:47735189-47735208 | Msa1292010:CDS | 45.0% | |
| GGGTGTGGTAAGGAAGTTTA+TGG | - | chr8_3:47735264-47735283 | Msa1292010:intron | 45.0% | |
| GCAGAGGCTTCTGTTACTAA+AGG | - | chr8_3:47735507-47735526 | Msa1292010:intron | 45.0% | |
| !! | AAAAAAAAAAAATACAAAAA+TGG | - | chr8_3:47732924-47732943 | Msa1292010:CDS | 5.0% |
| CTCCAATATGCCCACCTTCA+CGG | - | chr8_3:47733220-47733239 | Msa1292010:CDS | 50.0% | |
| GTACCAGGTGAAGGAGGTTT+GGG | + | chr8_3:47733316-47733335 | None:intergenic | 50.0% | |
| TGTACCAGGTGAAGGAGGTT+TGG | + | chr8_3:47733317-47733336 | None:intergenic | 50.0% | |
| !! | AATGGAAGGTGCTCACCTTC+GGG | - | chr8_3:47733373-47733392 | Msa1292010:CDS | 50.0% |
| ! | GATTCTGTGGATGTTGGTGG+AGG | + | chr8_3:47733448-47733467 | None:intergenic | 50.0% |
| CGTGATTCTGTGGATGTTGG+TGG | + | chr8_3:47733451-47733470 | None:intergenic | 50.0% | |
| GTTTGTGTCATGTGGGTACC+AGG | - | chr8_3:47734059-47734078 | Msa1292010:intron | 50.0% | |
| CTGGGAGAAGAGGAAAACGA+AGG | - | chr8_3:47734200-47734219 | Msa1292010:CDS | 50.0% | |
| CCACCAACCGCATACAACAA+AGG | + | chr8_3:47734563-47734582 | None:intergenic | 50.0% | |
| ! | CCTTTGTTGTATGCGGTTGG+TGG | - | chr8_3:47734560-47734579 | Msa1292010:intron | 50.0% |
| GATTTGTGGGCGAGTTGTGA+TGG | - | chr8_3:47734663-47734682 | Msa1292010:intron | 50.0% | |
| ! | GGAGGATAAGTTTGAGGTGG+TGG | - | chr8_3:47734684-47734703 | Msa1292010:intron | 50.0% |
| !! | GCACTTTAAAGTACCCCTGG+TGG | + | chr8_3:47734714-47734733 | None:intergenic | 50.0% |
| CCCTTACATGGCTGAAGAGA+TGG | - | chr8_3:47734864-47734883 | Msa1292010:intron | 50.0% | |
| GGCAGAGGATAATGTTGGTG+TGG | - | chr8_3:47735050-47735069 | Msa1292010:intron | 50.0% | |
| ATGTGGGTGAACAGGAAGCT+GGG | - | chr8_3:47735157-47735176 | Msa1292010:CDS | 50.0% | |
| GGTAAAAGACAAGGGCAAGG+AGG | - | chr8_3:47735296-47735315 | Msa1292010:intron | 50.0% | |
| GTAACAGAAGCCTCTGCAGA+AGG | + | chr8_3:47735504-47735523 | None:intergenic | 50.0% | |
| CGTGAAGGTGGGCATATTGG+AGG | + | chr8_3:47733222-47733241 | None:intergenic | 55.0% | |
| AGCCGTGAAGGTGGGCATAT+TGG | + | chr8_3:47733225-47733244 | None:intergenic | 55.0% | |
| !! | CCTACTGTAGGAGGCATCGT+GGG | + | chr8_3:47733253-47733272 | None:intergenic | 55.0% |
| ! | GGACTAGTGCCTACTGTAGG+AGG | + | chr8_3:47733262-47733281 | None:intergenic | 55.0% |
| ! | GGAGGACTAGTGCCTACTGT+AGG | + | chr8_3:47733265-47733284 | None:intergenic | 55.0% |
| !! | CCTATTGTAGGAGGCGTCGT+GGG | + | chr8_3:47733286-47733305 | None:intergenic | 55.0% |
| !! | TTGGGTGGGCTGCCTATTGT+AGG | + | chr8_3:47733298-47733317 | None:intergenic | 55.0% |
| CAGGTGAAGGAGGTTTGGGT+GGG | + | chr8_3:47733312-47733331 | None:intergenic | 55.0% | |
| CCTAGTGTACCAGGTGAAGG+AGG | + | chr8_3:47733322-47733341 | None:intergenic | 55.0% | |
| CCTCCTTCACCTGGTACACT+AGG | - | chr8_3:47733319-47733338 | Msa1292010:CDS | 55.0% | |
| GTGCCTAGTGTACCAGGTGA+AGG | + | chr8_3:47733325-47733344 | None:intergenic | 55.0% | |
| !! | GGTTGATAGCCGTCTCGATC+AGG | - | chr8_3:47733394-47733413 | Msa1292010:CDS | 55.0% |
| !! | GGTGTCGATCCTGATCGAGA+CGG | + | chr8_3:47733406-47733425 | None:intergenic | 55.0% |
| TGTGGGTACCAGGGCTGATT+TGG | - | chr8_3:47734069-47734088 | Msa1292010:intron | 55.0% | |
| GCGATTCACCGATCGAAACC+AGG | - | chr8_3:47734237-47734256 | Msa1292010:CDS | 55.0% | |
| TTGTGGGCGAGTTGTGATGG+AGG | - | chr8_3:47734666-47734685 | Msa1292010:intron | 55.0% | |
| TCTCCACTCCAGCTTCAGTG+GGG | + | chr8_3:47735077-47735096 | None:intergenic | 55.0% | |
| GTCTCCACTCCAGCTTCAGT+GGG | + | chr8_3:47735078-47735097 | None:intergenic | 55.0% | |
| TGTCTCCACTCCAGCTTCAG+TGG | + | chr8_3:47735079-47735098 | None:intergenic | 55.0% | |
| GCTTCCTGTTCACCCACATG+TGG | + | chr8_3:47735156-47735175 | None:intergenic | 55.0% | |
| CATGTGGGTGAACAGGAAGC+TGG | - | chr8_3:47735156-47735175 | Msa1292010:CDS | 55.0% | |
| AGGAAGCTGGGCCAACTGTT+GGG | - | chr8_3:47735169-47735188 | Msa1292010:CDS | 55.0% | |
| CAGAAGCCTCTGCAGAAGGT+GGG | + | chr8_3:47735500-47735519 | None:intergenic | 55.0% | |
| ACAGAAGCCTCTGCAGAAGG+TGG | + | chr8_3:47735501-47735520 | None:intergenic | 55.0% | |
| !! | ACTGTAGGAGGCATCGTGGG+AGG | + | chr8_3:47733250-47733269 | None:intergenic | 60.0% |
| CCCACGATGCCTCCTACAGT+AGG | - | chr8_3:47733250-47733269 | Msa1292010:CDS | 60.0% | |
| !! | GCCTACTGTAGGAGGCATCG+TGG | + | chr8_3:47733254-47733273 | None:intergenic | 60.0% |
| !! | ATTGTAGGAGGCGTCGTGGG+AGG | + | chr8_3:47733283-47733302 | None:intergenic | 60.0% |
| CCCACGACGCCTCCTACAAT+AGG | - | chr8_3:47733283-47733302 | Msa1292010:CDS | 60.0% | |
| !! | GCCTATTGTAGGAGGCGTCG+TGG | + | chr8_3:47733287-47733306 | None:intergenic | 60.0% |
| !! | GGTGGGCTGCCTATTGTAGG+AGG | + | chr8_3:47733295-47733314 | None:intergenic | 60.0% |
| CCAGGTGAAGGAGGTTTGGG+TGG | + | chr8_3:47733313-47733332 | None:intergenic | 60.0% | |
| CCACCCAAACCTCCTTCACC+TGG | - | chr8_3:47733310-47733329 | Msa1292010:CDS | 60.0% | |
| !! | GGAGGAGTGCCTAGTGTACC+AGG | + | chr8_3:47733331-47733350 | None:intergenic | 60.0% |
| CGAGACGGCTATCAACCCGA+AGG | + | chr8_3:47733391-47733410 | None:intergenic | 60.0% | |
| ! | GATGTTGGTGGAGGACGTGG+AGG | + | chr8_3:47733439-47733458 | None:intergenic | 60.0% |
| ! | GTGGATGTTGGTGGAGGACG+TGG | + | chr8_3:47733442-47733461 | None:intergenic | 60.0% |
| ! | TGAGGTGGTGGTTCACCACC+AGG | - | chr8_3:47734696-47734715 | Msa1292010:intron | 60.0% |
| ! | GAGGTGGTGGTTCACCACCA+GGG | - | chr8_3:47734697-47734716 | Msa1292010:intron | 60.0% |
| ! | AGGTGGTGGTTCACCACCAG+GGG | - | chr8_3:47734698-47734717 | Msa1292010:intron | 60.0% |
| TGGGCCACATGTGGGTGAAC+AGG | - | chr8_3:47735149-47735168 | Msa1292010:CDS | 60.0% | |
| CAGGAAGCTGGGCCAACTGT+TGG | - | chr8_3:47735168-47735187 | Msa1292010:CDS | 60.0% | |
| TGCAGACCCACCTTCTGCAG+AGG | - | chr8_3:47735491-47735510 | Msa1292010:intron | 60.0% | |
| GGGAGGACAGCCGTGAAGGT+GGG | + | chr8_3:47733233-47733252 | None:intergenic | 65.0% | |
| TGGGAGGACAGCCGTGAAGG+TGG | + | chr8_3:47733234-47733253 | None:intergenic | 65.0% | |
| TCGTGGGAGGACAGCCGTGA+AGG | + | chr8_3:47733237-47733256 | None:intergenic | 65.0% | |
| GGACGTGGAGGACTGACTGG+TGG | + | chr8_3:47733427-47733446 | None:intergenic | 65.0% | |
| GGAGGACGTGGAGGACTGAC+TGG | + | chr8_3:47733430-47733449 | None:intergenic | 65.0% | |
| GGTGTGGGCCCCACTGAAGC+TGG | - | chr8_3:47735066-47735085 | Msa1292010:CDS | 70.0% | |
| GGGCCCCACTGAAGCTGGAG+TGG | - | chr8_3:47735071-47735090 | Msa1292010:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 47732904 | 47735542 | 47732904 | ID=Msa1292010;Name=Msa1292010 |
| chr8_3 | mRNA | 47732904 | 47735542 | 47732904 | ID=Msa1292010-mRNA-1;Parent=Msa1292010;Name=Msa1292010-mRNA-1;_AED=0.55;_eAED=0.55;_QI=0|0|0|0.25|1|1|4|0|389 |
| chr8_3 | exon | 47735537 | 47735542 | 47735537 | ID=Msa1292010-mRNA-1:exon:13289;Parent=Msa1292010-mRNA-1 |
| chr8_3 | exon | 47735052 | 47735235 | 47735052 | ID=Msa1292010-mRNA-1:exon:13288;Parent=Msa1292010-mRNA-1 |
| chr8_3 | exon | 47734188 | 47734287 | 47734188 | ID=Msa1292010-mRNA-1:exon:13287;Parent=Msa1292010-mRNA-1 |
| chr8_3 | exon | 47732904 | 47733783 | 47732904 | ID=Msa1292010-mRNA-1:exon:13286;Parent=Msa1292010-mRNA-1 |
| chr8_3 | CDS | 47735537 | 47735542 | 47735537 | ID=Msa1292010-mRNA-1:cds;Parent=Msa1292010-mRNA-1 |
| chr8_3 | CDS | 47735052 | 47735235 | 47735052 | ID=Msa1292010-mRNA-1:cds;Parent=Msa1292010-mRNA-1 |
| chr8_3 | CDS | 47734188 | 47734287 | 47734188 | ID=Msa1292010-mRNA-1:cds;Parent=Msa1292010-mRNA-1 |
| chr8_3 | CDS | 47732904 | 47733783 | 47732904 | ID=Msa1292010-mRNA-1:cds;Parent=Msa1292010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
