AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1356020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356020 MtrunA17_Chr8g0344151 98.047 512 10 0 1 512 1 512 0.0 1036
Msa1356020 MtrunA17_Chr8g0344181 84.766 512 75 1 4 512 3 514 0.0 897
Msa1356020 MtrunA17_Chr8g0344191 79.102 512 104 2 4 512 35 546 0.0 859
Msa1356020 MtrunA17_Chr3g0086691 41.860 516 278 8 12 511 4 513 2.06e-140 414
Msa1356020 MtrunA17_Chr2g0310391 42.236 483 268 5 16 493 6 482 8.98e-140 412
Msa1356020 MtrunA17_Chr8g0382901 43.227 502 273 4 5 506 467 956 2.32e-139 426
Msa1356020 MtrunA17_Chr8g0382901 43.255 467 238 5 30 493 22 464 1.25e-129 400
Msa1356020 MtrunA17_Chr3g0116681 41.331 496 283 5 10 503 13 502 2.91e-139 411
Msa1356020 MtrunA17_Chr4g0061381 41.983 474 263 4 45 510 40 509 4.85e-139 410
Msa1356020 MtrunA17_Chr2g0310381 43.601 461 251 4 36 493 28 482 1.31e-138 409
Msa1356020 MtrunA17_Chr3g0086661 43.275 513 275 7 12 511 4 513 1.64e-137 407
Msa1356020 MtrunA17_Chr3g0086651 42.885 513 277 7 12 511 4 513 5.94e-137 405
Msa1356020 MtrunA17_Chr3g0094171 42.323 508 277 9 13 512 16 515 9.07e-137 405
Msa1356020 MtrunA17_Chr3g0094231 40.369 488 274 9 29 510 29 505 5.40e-131 390
Msa1356020 MtrunA17_Chr7g0258221 40.270 519 290 9 6 512 1 511 3.38e-130 388
Msa1356020 MtrunA17_Chr3g0116741 38.800 500 285 7 8 497 21 509 3.46e-129 386
Msa1356020 MtrunA17_Chr4g0047661 40.040 497 280 6 12 497 21 510 5.16e-129 385
Msa1356020 MtrunA17_Chr6g0484811 38.780 508 283 9 5 497 4 498 1.30e-127 381
Msa1356020 MtrunA17_Chr3g0101581 37.526 485 294 3 19 500 20 498 1.68e-127 381
Msa1356020 MtrunA17_Chr3g0084921 37.833 526 294 10 6 510 1 514 4.69e-127 380
Msa1356020 MtrunA17_Chr6g0484841 39.167 480 273 7 23 493 24 493 8.54e-127 379
Msa1356020 MtrunA17_Chr1g0174471 38.447 515 295 10 5 505 15 521 1.69e-126 379
Msa1356020 MtrunA17_Chr5g0430091 38.124 501 291 6 16 507 17 507 5.25e-126 377
Msa1356020 MtrunA17_Chr7g0255531 37.598 508 299 6 12 510 4 502 5.74e-126 377
Msa1356020 MtrunA17_Chr4g0058231 40.084 474 264 5 35 497 27 491 1.60e-125 375
Msa1356020 MtrunA17_Chr1g0174451 38.218 505 291 10 12 505 12 506 3.15e-125 375
Msa1356020 MtrunA17_Chr5g0430131 38.200 500 291 6 16 507 17 506 4.33e-125 375
Msa1356020 MtrunA17_Chr3g0101711 38.057 494 286 6 13 494 9 494 4.34e-125 375
Msa1356020 MtrunA17_Chr7g0235551 41.414 495 270 10 6 486 1 489 5.34e-125 375
Msa1356020 MtrunA17_Chr7g0254641 38.320 488 290 5 33 510 34 520 3.25e-124 373
Msa1356020 MtrunA17_Chr5g0403351 37.876 499 290 6 13 500 10 499 3.36e-124 372
Msa1356020 MtrunA17_Chr8g0390881 38.067 507 288 8 12 505 12 505 4.52e-124 372
Msa1356020 MtrunA17_Chr5g0430101 38.413 479 276 6 37 507 37 504 1.25e-123 371
Msa1356020 MtrunA17_Chr4g0047641 38.833 497 287 5 12 497 19 509 1.46e-123 371
Msa1356020 MtrunA17_Chr5g0403331 38.431 497 286 6 16 500 12 500 1.51e-123 371
Msa1356020 MtrunA17_Chr3g0101601 39.474 494 276 8 15 500 15 493 2.82e-123 370
Msa1356020 MtrunA17_Chr3g0101571 38.034 468 279 3 36 500 36 495 7.52e-123 369
Msa1356020 MtrunA17_Chr5g0403321 40.084 479 267 5 34 500 32 502 8.96e-123 369
Msa1356020 MtrunA17_Chr5g0445461 38.742 493 283 6 11 494 8 490 2.24e-122 368
Msa1356020 MtrunA17_Chr5g0430081 37.232 513 290 8 15 505 1 503 3.06e-122 367
Msa1356020 MtrunA17_Chr4g0058191 40.299 469 267 6 39 503 28 487 4.85e-122 366
Msa1356020 MtrunA17_Chr3g0101691 37.600 500 291 6 14 500 10 501 5.63e-122 367
Msa1356020 MtrunA17_Chr5g0430031 36.400 500 299 6 16 506 17 506 9.07e-122 366
Msa1356020 MtrunA17_Chr4g0047631 38.983 472 269 7 33 497 46 505 2.09e-121 365
Msa1356020 MtrunA17_Chr3g0101701 37.800 500 290 6 14 500 10 501 2.54e-121 365
Msa1356020 MtrunA17_Chr5g0445441 37.773 503 294 6 11 504 49 541 2.92e-121 366
Msa1356020 MtrunA17_Chr4g0047691 38.969 485 278 8 33 511 49 521 4.91e-121 365
Msa1356020 MtrunA17_Chr3g0101731 39.545 483 273 8 34 509 34 504 6.39e-121 364
Msa1356020 MtrunA17_Chr3g0101631 37.747 506 287 8 7 500 3 492 1.79e-120 363
Msa1356020 MtrunA17_Chr1g0174481 37.378 511 303 9 1 505 1 500 2.58e-120 362
Msa1356020 MtrunA17_Chr3g0101621 39.220 487 276 7 19 500 16 487 4.14e-120 362
Msa1356020 MtrunA17_Chr4g0058281 38.124 501 296 8 7 499 15 509 4.59e-120 362
Msa1356020 MtrunA17_Chr4g0058201 39.323 473 276 5 35 503 27 492 1.15e-119 360
Msa1356020 MtrunA17_Chr3g0101611 39.388 490 279 4 26 505 28 509 2.22e-119 360
Msa1356020 MtrunA17_Chr5g0445451 37.323 493 290 6 11 494 8 490 2.25e-119 360
Msa1356020 MtrunA17_Chr8g0362701 38.207 513 301 8 1 505 1 505 2.57e-119 360
Msa1356020 MtrunA17_Chr4g0035921 36.609 519 303 7 4 505 5 514 8.60e-119 359
Msa1356020 MtrunA17_Chr4g0024771 36.275 510 306 7 4 504 1 500 6.82e-118 356
Msa1356020 MtrunA17_Chr5g0445531 38.806 469 274 4 35 500 37 495 8.30e-118 356
Msa1356020 MtrunA17_Chr5g0445381 37.325 501 295 6 13 504 41 531 1.32e-117 357
Msa1356020 MtrunA17_Chr3g0101721 36.456 491 288 6 18 494 13 493 2.16e-117 355
Msa1356020 MtrunA17_Chr3g0101651 36.200 500 298 6 14 500 10 501 5.01e-117 354
Msa1356020 MtrunA17_Chr6g0472311 36.961 487 287 6 33 505 38 518 5.25e-117 354
Msa1356020 MtrunA17_Chr5g0431641 37.022 497 292 6 14 500 11 496 1.61e-116 353
Msa1356020 MtrunA17_Chr1g0174461 36.791 511 301 9 4 505 8 505 2.21e-116 353
Msa1356020 MtrunA17_Chr5g0405001 37.600 500 284 8 20 503 30 517 2.37e-116 353
Msa1356020 MtrunA17_Chr3g0101661 36.437 494 294 6 13 494 9 494 4.30e-116 352
Msa1356020 MtrunA17_Chr4g0053621 39.412 510 274 11 6 504 9 494 7.59e-116 351
Msa1356020 MtrunA17_Chr4g0011921 39.279 499 289 8 11 502 3 494 8.57e-116 350
Msa1356020 MtrunA17_Chr6g0451781 39.279 499 280 8 32 512 70 563 9.67e-116 353
Msa1356020 MtrunA17_Chr6g0451691 38.252 515 291 8 20 512 25 534 1.06e-115 352
Msa1356020 MtrunA17_Chr5g0445421 37.195 492 271 6 11 494 82 543 1.56e-115 352
Msa1356020 MtrunA17_Chr4g0058261 36.498 474 286 6 35 499 61 528 1.65e-115 351
Msa1356020 MtrunA17_Chr8g0372251 37.628 489 280 6 31 503 30 509 3.50e-115 349
Msa1356020 MtrunA17_Chr1g0174441 36.100 518 308 10 1 505 20 527 5.25e-115 350
Msa1356020 MtrunA17_Chr4g0057001 39.535 473 281 3 35 507 49 516 5.92e-115 349
Msa1356020 MtrunA17_Chr4g0011961 38.730 488 282 9 22 502 16 493 7.84e-115 348
Msa1356020 MtrunA17_Chr6g0466331 37.552 482 280 8 7 477 3 474 1.30e-114 348
Msa1356020 MtrunA17_Chr8g0361471 37.344 482 281 8 7 477 3 474 1.55e-114 348
Msa1356020 MtrunA17_Chr6g0465511 37.552 482 280 8 7 477 3 474 2.80e-114 347
Msa1356020 MtrunA17_Chr8g0362481 38.826 443 256 7 71 505 1 436 6.04e-114 344
Msa1356020 MtrunA17_Chr5g0431671 38.771 472 272 5 35 500 37 497 7.44e-114 346
Msa1356020 MtrunA17_Chr3g0101671 37.177 503 289 9 14 500 10 501 8.88e-114 346
Msa1356020 MtrunA17_Chr3g0101801 37.320 485 286 5 20 494 22 498 3.41e-113 345
Msa1356020 MtrunA17_Chr5g0446161 36.111 504 299 9 12 503 7 499 1.13e-112 343
Msa1356020 MtrunA17_Chr3g0101821 38.477 486 281 5 19 494 14 491 1.95e-112 342
Msa1356020 MtrunA17_Chr1g0162811 36.673 499 299 8 9 500 8 496 1.23e-111 340
Msa1356020 MtrunA17_Chr3g0101811 35.686 510 291 7 12 494 7 506 1.60e-111 340
Msa1356020 MtrunA17_Chr1g0160851 34.756 492 309 6 13 500 10 493 2.30e-111 339
Msa1356020 MtrunA17_Chr5g0446151 36.306 471 288 5 35 503 40 500 3.28e-111 339
Msa1356020 MtrunA17_Chr4g0011981 39.112 473 273 8 37 502 30 494 8.32e-111 338
Msa1356020 MtrunA17_Chr6g0451741 36.328 512 300 8 20 510 44 550 2.49e-110 338
Msa1356020 MtrunA17_Chr4g0030701 37.800 500 285 8 27 505 24 518 2.90e-110 337
Msa1356020 MtrunA17_Chr4g0076161 36.364 506 293 10 15 503 9 502 3.79e-110 336
Msa1356020 MtrunA17_Chr1g0205361 35.743 498 307 6 11 503 7 496 7.62e-110 335
Msa1356020 MtrunA17_Chr3g0101751 36.511 493 295 5 12 494 14 498 1.03e-109 335
Msa1356020 MtrunA17_Chr3g0101761 37.166 487 288 5 18 494 13 491 1.06e-109 335
Msa1356020 MtrunA17_Chr5g0395331 36.929 482 295 7 24 500 24 501 1.34e-109 335
Msa1356020 MtrunA17_Chr2g0304871 38.386 508 288 8 20 509 18 518 2.18e-109 335
Msa1356020 MtrunA17_Chr1g0156101 36.575 473 288 6 37 497 33 505 3.93e-109 334
Msa1356020 MtrunA17_Chr4g0008101 36.276 521 307 8 10 510 13 528 7.99e-109 334
Msa1356020 MtrunA17_Chr8g0357421 37.349 498 284 8 12 494 7 491 1.07e-108 333
Msa1356020 MtrunA17_Chr3g0101831 38.057 494 287 6 12 494 7 492 1.17e-108 333
Msa1356020 MtrunA17_Chr4g0011901 37.214 481 289 7 29 502 20 494 1.60e-108 332
Msa1356020 MtrunA17_Chr8g0356001 34.739 498 312 4 11 500 10 502 2.13e-108 332
Msa1356020 MtrunA17_Chr5g0419691 37.500 472 286 5 27 494 20 486 6.54e-108 330
Msa1356020 MtrunA17_Chr6g0451751 35.701 521 310 8 13 512 14 530 1.20e-107 331
Msa1356020 MtrunA17_Chr4g0011881 38.037 489 293 5 18 502 12 494 1.26e-107 330
Msa1356020 MtrunA17_Chr4g0020041 35.081 496 305 6 13 500 12 498 2.42e-107 329
Msa1356020 MtrunA17_Chr6g0463791 36.957 506 284 13 7 494 1 489 3.02e-107 329
Msa1356020 MtrunA17_Chr1g0164211 37.474 475 286 5 29 500 24 490 5.46e-107 328
Msa1356020 MtrunA17_Chr1g0207841 37.945 477 273 7 47 505 49 520 5.84e-107 329
Msa1356020 MtrunA17_Chr5g0395321 34.774 509 308 7 1 500 1 494 6.60e-107 329
Msa1356020 MtrunA17_Chr5g0401681 36.800 500 289 9 13 504 10 490 2.58e-106 326
Msa1356020 MtrunA17_Chr5g0431501 35.579 475 297 4 36 505 33 503 7.99e-106 325
Msa1356020 MtrunA17_Chr5g0431461 35.579 475 297 4 36 505 33 503 7.99e-106 325
Msa1356020 MtrunA17_Chr4g0011871 37.076 472 289 5 27 494 20 487 1.00e-105 325
Msa1356020 MtrunA17_Chr4g0039901 36.250 480 296 5 26 502 25 497 1.34e-105 325
Msa1356020 MtrunA17_Chr7g0218601 37.553 474 285 6 36 505 34 500 1.45e-105 324
Msa1356020 MtrunA17_Chr6g0463801 36.674 469 283 5 35 500 36 493 1.71e-105 324
Msa1356020 MtrunA17_Chr4g0030711 37.259 467 268 7 47 493 48 509 2.03e-105 325
Msa1356020 MtrunA17_Chr7g0224561 36.515 482 272 10 9 472 5 470 2.78e-105 324
Msa1356020 MtrunA17_Chr5g0395381 34.714 507 286 8 1 500 1 469 3.59e-105 322
Msa1356020 MtrunA17_Chr5g0431511 34.947 475 300 4 36 505 33 503 3.88e-105 323
Msa1356020 MtrunA17_Chr8g0357431 36.072 499 300 5 12 499 7 497 4.34e-105 323
Msa1356020 MtrunA17_Chr1g0162801 35.471 499 300 6 15 500 10 499 7.90e-105 323
Msa1356020 MtrunA17_Chr3g0082701 35.795 528 307 11 9 510 8 529 1.21e-104 323
Msa1356020 MtrunA17_Chr4g0056951 37.389 452 277 4 57 507 65 511 2.01e-104 322
Msa1356020 MtrunA17_Chr7g0246221 35.197 483 306 4 13 490 9 489 9.10e-104 320
Msa1356020 MtrunA17_Chr1g0205371 35.510 490 307 3 13 500 12 494 4.62e-103 318
Msa1356020 MtrunA17_Chr7g0224551 35.892 482 275 10 9 472 5 470 5.36e-103 318
Msa1356020 MtrunA17_Chr2g0280261 37.090 488 291 7 26 509 22 497 1.44e-102 317
Msa1356020 MtrunA17_Chr4g0052851 38.095 483 267 11 29 504 25 482 2.89e-102 316
Msa1356020 MtrunA17_Chr7g0218611 36.701 485 298 5 25 505 22 501 1.49e-101 314
Msa1356020 MtrunA17_Chr1g0200961 37.323 493 294 8 15 500 9 493 4.00e-101 313
Msa1356020 MtrunA17_Chr8g0339311 34.906 530 316 10 7 510 1 527 4.20e-101 314
Msa1356020 MtrunA17_Chr6g0466941 36.240 516 303 11 15 510 13 522 4.28e-101 313
Msa1356020 MtrunA17_Chr5g0406651 36.250 480 297 5 19 494 13 487 4.41e-101 313
Msa1356020 MtrunA17_Chr1g0156081 35.802 486 300 6 31 504 51 536 1.41e-100 313
Msa1356020 MtrunA17_Chr1g0167321 35.341 498 296 7 18 500 10 496 3.12e-100 311
Msa1356020 MtrunA17_Chr6g0458561 35.876 485 293 9 37 510 55 532 4.38e-100 311
Msa1356020 MtrunA17_Chr8g0339331 35.714 490 294 10 37 512 39 521 5.95e-100 310
Msa1356020 MtrunA17_Chr8g0355961 34.538 498 313 4 11 500 10 502 8.40e-100 310
Msa1356020 MtrunA17_Chr6g0466901 34.429 517 315 10 13 510 10 521 8.66e-100 310
Msa1356020 MtrunA17_Chr2g0314731 33.470 487 298 7 16 486 3 479 2.21e-99 308
Msa1356020 MtrunA17_Chr5g0401691 35.758 495 293 9 22 511 41 515 2.25e-99 309
Msa1356020 MtrunA17_Chr2g0314721 34.737 475 284 7 16 474 14 478 4.48e-99 308
Msa1356020 MtrunA17_Chr4g0052861 35.294 493 292 10 19 504 18 490 5.24e-99 307
Msa1356020 MtrunA17_Chr4g0017411 36.722 482 275 9 29 504 22 479 1.32e-98 306
Msa1356020 MtrunA17_Chr7g0258211 35.345 464 280 7 45 497 48 502 1.01e-97 305
Msa1356020 MtrunA17_Chr1g0197881 33.333 477 302 7 15 485 9 475 1.41e-97 303
Msa1356020 MtrunA17_Chr1g0197851 33.054 478 303 7 15 485 9 476 3.54e-97 302
Msa1356020 MtrunA17_Chr4g0046631 35.564 523 307 10 6 510 13 523 5.08e-97 303
Msa1356020 MtrunA17_Chr1g0197891 33.544 474 299 7 18 485 13 476 5.21e-97 302
Msa1356020 MtrunA17_Chr7g0265611 34.531 501 299 10 16 500 26 513 5.82e-97 303
Msa1356020 MtrunA17_Chr5g0430111 38.353 425 235 8 16 427 17 427 1.19e-96 299
Msa1356020 MtrunA17_Chr6g0451641 34.623 491 295 11 37 510 40 521 1.91e-95 299
Msa1356020 MtrunA17_Chr1g0176831 33.966 474 291 9 11 474 36 497 6.53e-94 295
Msa1356020 MtrunA17_Chr1g0197871 32.244 459 300 4 28 484 26 475 1.07e-93 293
Msa1356020 MtrunA17_Chr4g0046321 34.714 507 290 14 31 511 30 521 1.48e-93 294
Msa1356020 MtrunA17_Chr4g0046351 34.714 507 290 13 31 511 30 521 1.51e-93 294
Msa1356020 MtrunA17_Chr3g0101741 33.796 432 271 4 71 500 1 419 3.08e-93 290
Msa1356020 MtrunA17_Chr4g0046331 34.765 489 278 13 31 493 30 503 2.34e-92 291
Msa1356020 MtrunA17_Chr8g0351801 34.249 473 285 7 46 497 44 511 1.53e-91 289
Msa1356020 MtrunA17_Chr4g0039391 35.876 485 292 10 27 504 27 499 9.86e-91 286
Msa1356020 MtrunA17_Chr4g0052881 33.665 502 305 10 11 504 10 491 1.29e-90 286
Msa1356020 MtrunA17_Chr1g0213671 34.504 484 294 10 34 503 32 506 1.42e-90 286
Msa1356020 MtrunA17_Chr7g0246121 35.914 465 276 7 47 501 45 497 1.82e-90 285
Msa1356020 MtrunA17_Chr2g0296651 32.806 506 317 7 6 504 1 490 4.44e-90 284
Msa1356020 MtrunA17_Chr7g0246151 35.556 450 278 6 47 490 45 488 1.95e-89 283
Msa1356020 MtrunA17_Chr2g0296661 36.495 485 283 9 26 502 26 493 1.25e-87 278
Msa1356020 MtrunA17_Chr7g0246131 34.227 485 307 5 13 490 11 490 5.35e-86 274
Msa1356020 MtrunA17_Chr5g0430071 38.788 330 187 5 183 506 39 359 7.67e-82 259
Msa1356020 MtrunA17_Chr7g0246181 34.423 459 289 4 47 499 45 497 5.28e-80 258
Msa1356020 MtrunA17_Chr1g0160861 38.125 320 191 2 181 500 22 334 1.03e-79 252
Msa1356020 MtrunA17_Chr1g0200951 33.468 496 295 16 28 505 51 529 3.54e-77 251
Msa1356020 MtrunA17_Chr8g0370641 30.755 530 322 11 13 512 12 526 6.54e-77 251
Msa1356020 MtrunA17_Chr1g0156061 33.056 481 245 9 31 500 50 464 3.43e-74 242
Msa1356020 MtrunA17_Chr8g0370651 29.775 534 326 12 13 512 12 530 4.10e-74 243
Msa1356020 MtrunA17_Chr5g0419451 32.981 473 292 10 38 503 62 516 6.31e-74 243
Msa1356020 MtrunA17_Chr3g0107611 30.268 522 327 14 15 510 27 537 3.31e-73 241
Msa1356020 MtrunA17_Chr8g0346261 34.172 477 287 16 38 504 86 545 7.09e-73 241
Msa1356020 MtrunA17_Chr8g0377341 33.121 471 295 12 39 504 70 525 2.74e-71 236
Msa1356020 MtrunA17_Chr5g0431591 39.057 297 174 4 208 500 21 314 7.56e-71 229
Msa1356020 MtrunA17_Chr3g0107541 30.689 479 317 10 45 512 59 533 1.92e-69 231
Msa1356020 MtrunA17_Chr6g0451811 48.815 211 103 2 304 512 4 211 9.91e-69 219
Msa1356020 MtrunA17_Chr5g0432751 29.437 462 312 9 28 480 25 481 7.48e-66 221
Msa1356020 MtrunA17_Chr5g0446101 37.273 330 183 7 180 503 1 312 2.93e-65 214
Msa1356020 MtrunA17_Chr8g0390871 48.020 202 103 2 293 493 15 215 6.87e-65 210
Msa1356020 MtrunA17_Chr6g0451771 47.143 210 106 2 303 510 20 226 2.68e-63 206
Msa1356020 MtrunA17_Chr1g0174431 46.635 208 102 3 305 505 1 206 3.74e-63 205
Msa1356020 MtrunA17_Chr4g0011941 45.918 196 106 0 305 500 1 196 1.11e-62 203
Msa1356020 MtrunA17_Chr4g0058211 47.264 201 104 1 303 503 17 215 1.23e-62 204
Msa1356020 MtrunA17_Chr6g0451681 43.983 241 130 2 274 512 246 483 1.50e-62 212
Msa1356020 MtrunA17_Chr6g0451681 34.641 153 96 2 18 166 41 193 2.07e-22 100
Msa1356020 MtrunA17_Chr2g0310351 46.237 186 100 0 305 490 1 186 3.92e-62 202
Msa1356020 MtrunA17_Chr4g0046681 44.749 219 112 3 297 511 23 236 1.77e-60 199
Msa1356020 MtrunA17_Chr4g0011851 43.939 198 111 0 297 494 8 205 3.15e-59 195
Msa1356020 MtrunA17_Chr1g0210091 30.398 477 311 10 17 477 40 511 5.89e-59 204
Msa1356020 MtrunA17_Chr1g0198191 28.838 482 299 16 13 470 22 483 3.44e-58 201
Msa1356020 MtrunA17_Chr4g0074581 29.924 528 322 17 10 504 30 542 3.42e-57 199
Msa1356020 MtrunA17_Chr3g0101591 43.655 197 111 0 304 500 38 234 1.86e-56 188
Msa1356020 MtrunA17_Chr5g0402981 45.729 199 102 3 315 510 2 197 1.42e-54 182
Msa1356020 MtrunA17_Chr5g0445371 37.546 269 134 4 243 510 1 236 3.62e-54 182
Msa1356020 MtrunA17_Chr2g0280081 30.238 463 291 13 60 505 558 1005 1.19e-53 195
Msa1356020 MtrunA17_Chr2g0280081 29.070 430 278 9 60 473 57 475 1.59e-46 174
Msa1356020 MtrunA17_Chr1g0174421 32.323 297 193 4 9 301 20 312 1.42e-53 184
Msa1356020 MtrunA17_Chr5g0413911 27.953 508 318 14 25 499 31 523 1.86e-52 186
Msa1356020 MtrunA17_Chr2g0314781 44.578 166 92 0 321 486 1 166 3.55e-52 175
Msa1356020 MtrunA17_Chr8g0364651 28.791 521 320 17 11 505 4 499 8.11e-52 183
Msa1356020 MtrunA17_Chr2g0280071 28.190 525 342 14 1 504 26 536 2.45e-51 186
Msa1356020 MtrunA17_Chr4g0046661 40.693 231 120 4 292 511 6 230 6.20e-51 173
Msa1356020 MtrunA17_Chr3g0086681 46.821 173 86 2 343 511 5 175 9.07e-51 171
Msa1356020 MtrunA17_Chr5g0423621 43.889 180 99 1 321 500 1 178 1.17e-50 171
Msa1356020 MtrunA17_Chr6g0463621 40.887 203 115 3 305 503 1 202 6.84e-50 170
Msa1356020 MtrunA17_Chr4g0030741 34.650 329 192 9 9 328 35 349 3.10e-49 173
Msa1356020 MtrunA17_Chr8g0387101 30.901 466 285 15 60 505 59 507 4.95e-49 176
Msa1356020 MtrunA17_Chr2g0280121 27.983 461 300 12 63 505 64 510 8.78e-49 176
Msa1356020 MtrunA17_Chr5g0445351 48.148 162 84 0 333 494 52 213 1.64e-48 166
Msa1356020 MtrunA17_Chr4g0046701 49.102 167 80 2 347 511 1 164 4.65e-48 164
Msa1356020 MtrunA17_Chr5g0430041 48.101 158 81 1 331 487 1 158 8.66e-48 163
Msa1356020 MtrunA17_Chr5g0409051 26.705 528 339 18 7 506 3 510 9.85e-48 172
Msa1356020 MtrunA17_Chr5g0445761 44.231 208 115 1 305 512 1 207 1.57e-46 161
Msa1356020 MtrunA17_Chr2g0280041 29.310 464 294 13 60 505 89 536 3.38e-46 169
Msa1356020 MtrunA17_Chr3g0107551 39.720 214 121 3 301 510 1 210 1.16e-45 159
Msa1356020 MtrunA17_Chr6g0463611 34.416 308 172 10 7 300 15 306 2.55e-45 162
Msa1356020 MtrunA17_Chr6g0477081 36.154 260 147 5 156 415 1 241 3.99e-45 158
Msa1356020 MtrunA17_Chr5g0430151 43.860 171 95 1 336 505 6 176 1.28e-44 155
Msa1356020 MtrunA17_Chr5g0445751 33.223 301 175 8 15 300 13 302 6.90e-43 155
Msa1356020 MtrunA17_Chr5g0444981 40.594 202 112 3 307 506 11 206 1.44e-42 150
Msa1356020 MtrunA17_Chr4g0011861 34.483 261 163 5 27 283 20 276 1.69e-40 148
Msa1356020 MtrunA17_Chr3g0105761 37.379 206 107 4 317 512 12 205 3.49e-40 144
Msa1356020 MtrunA17_Chr3g0101541 46.617 133 71 0 356 488 4 136 9.46e-40 140
Msa1356020 MtrunA17_Chr2g0334021 24.948 485 335 12 32 504 31 498 2.96e-39 149
Msa1356020 MtrunA17_Chr6g0451801 32.468 308 183 8 6 290 4 309 6.24e-39 144
Msa1356020 MtrunA17_Chr5g0402971 32.963 270 166 5 31 289 36 301 7.60e-39 144
Msa1356020 MtrunA17_Chr5g0445361 48.800 125 64 0 376 500 9 133 8.77e-39 138
Msa1356020 MtrunA17_Chr5g0430171 33.028 218 136 2 16 231 17 226 7.14e-38 139
Msa1356020 MtrunA17_Chr8g0364631 29.352 494 307 14 35 504 31 506 1.44e-37 144
Msa1356020 MtrunA17_Chr4g0028321 45.926 135 72 1 372 505 24 158 2.29e-37 135
Msa1356020 MtrunA17_Chr4g0046691 29.699 266 177 4 28 290 30 288 7.73e-37 138
Msa1356020 MtrunA17_Chr2g0280011 33.491 212 131 4 301 505 4 212 2.16e-36 134
Msa1356020 MtrunA17_Chr2g0280061 33.491 212 131 4 301 505 4 212 2.67e-36 134
Msa1356020 MtrunA17_Chr3g0116731 45.946 148 63 3 358 505 3 133 6.53e-35 127
Msa1356020 MtrunA17_Chr3g0117301 42.735 117 67 0 356 472 1 117 2.01e-34 125
Msa1356020 MtrunA17_Chr4g0011931 30.847 295 190 8 12 300 6 292 4.48e-34 130
Msa1356020 MtrunA17_Chr8g0381541 28.601 486 286 19 13 472 11 461 8.12e-34 134
Msa1356020 MtrunA17_Chr8g0381571 28.454 485 286 19 13 471 11 460 2.49e-33 132
Msa1356020 MtrunA17_Chr2g0310371 49.167 120 61 0 36 155 28 147 2.83e-33 123
Msa1356020 MtrunA17_Chr4g0076171 38.342 193 84 5 321 503 1 168 1.06e-31 120
Msa1356020 MtrunA17_Chr5g0445411 39.216 153 85 2 16 160 19 171 1.25e-31 120
Msa1356020 MtrunA17_Chr1g0207851 28.947 266 172 5 47 300 49 309 1.68e-30 122
Msa1356020 MtrunA17_Chr4g0046671 27.798 277 180 5 37 300 45 314 1.18e-29 118
Msa1356020 MtrunA17_Chr5g0431631 40.288 139 79 2 11 145 23 161 8.80e-29 111
Msa1356020 MtrunA17_Chr2g0293421 26.210 496 290 17 6 468 2 454 1.45e-28 118
Msa1356020 MtrunA17_Chr3g0117321 42.017 119 69 0 36 154 7 125 2.24e-28 109
Msa1356020 MtrunA17_Chr1g0151221 22.851 477 320 12 38 478 41 505 8.22e-28 116
Msa1356020 MtrunA17_Chr3g0135841 23.555 467 320 12 38 471 44 506 5.66e-27 114
Msa1356020 MtrunA17_Chr8g0372591 37.313 134 81 1 304 437 2 132 6.58e-27 105
Msa1356020 MtrunA17_Chr2g0293411 24.891 458 300 14 23 468 28 453 4.09e-26 111
Msa1356020 MtrunA17_Chr3g0107561 26.689 296 204 8 10 292 17 312 6.74e-26 108
Msa1356020 MtrunA17_Chr4g0030761 37.333 150 63 5 356 493 1 131 7.48e-25 100
Msa1356020 MtrunA17_Chr8g0339861 27.195 467 282 17 11 453 9 441 1.19e-23 103
Msa1356020 MtrunA17_Chr1g0203141 23.188 483 324 15 16 472 27 488 1.41e-23 103
Msa1356020 MtrunA17_Chr2g0310361 39.695 131 74 2 170 300 10 135 5.60e-23 95.1
Msa1356020 MtrunA17_Chr5g0400421 25.050 499 303 21 6 472 3 462 1.90e-22 100
Msa1356020 MtrunA17_Chr6g0451761 27.483 302 168 7 9 290 8 278 2.14e-22 97.1
Msa1356020 MtrunA17_Chr5g0430051 43.434 99 56 0 16 114 18 116 3.82e-22 91.7
Msa1356020 MtrunA17_Chr1g0176851 28.452 239 153 7 128 359 7 234 4.65e-22 95.1
Msa1356020 MtrunA17_Chr3g0105751 25.806 310 205 10 10 300 15 318 7.97e-22 97.4
Msa1356020 MtrunA17_Chr5g0400411 23.185 496 315 17 6 472 3 461 2.11e-21 97.1
Msa1356020 MtrunA17_Chr1g0203151 29.741 232 150 7 246 472 261 484 8.13e-21 95.5
Msa1356020 MtrunA17_Chr5g0396521 30.612 196 107 4 305 472 348 542 1.72e-20 94.7
Msa1356020 MtrunA17_Chr0c19g0493771 23.991 446 270 12 60 472 211 620 2.38e-20 94.7
Msa1356020 MtrunA17_Chr8g0372331 36.842 133 78 3 383 512 2 131 3.29e-20 86.7
Msa1356020 MtrunA17_Chr8g0371761 32.877 146 84 2 324 455 1 146 3.96e-20 87.0
Msa1356020 MtrunA17_Chr1g0184421 23.387 496 301 18 16 468 12 471 9.15e-20 92.4
Msa1356020 MtrunA17_Chr3g0116721 30.303 198 118 8 143 330 2 189 1.11e-19 87.0
Msa1356020 MtrunA17_Chr5g0445341 44.706 85 46 1 71 154 1 85 2.36e-19 82.8
Msa1356020 MtrunA17_Chr5g0403931 23.093 472 311 15 21 475 21 457 3.21e-19 90.5
Msa1356020 MtrunA17_Chr3g0078411 24.255 470 302 17 13 470 10 437 4.04e-19 90.1
Msa1356020 MtrunA17_Chr6g0455461 24.788 472 297 19 13 470 10 437 6.12e-19 89.4
Msa1356020 MtrunA17_Chr1g0179811 24.379 443 294 14 50 472 91 512 1.39e-18 89.0
Msa1356020 MtrunA17_Chr6g0484771 29.012 162 94 3 71 230 1 143 1.54e-18 82.4
Msa1356020 MtrunA17_Chr6g0479681 27.711 249 153 8 244 472 261 502 1.86e-18 88.2
Msa1356020 MtrunA17_Chr2g0313771 25.635 433 282 18 60 476 93 501 2.85e-18 87.8
Msa1356020 MtrunA17_Chr3g0107501 22.907 454 304 14 35 474 32 453 3.01e-18 87.4
Msa1356020 MtrunA17_Chr8g0351461 23.819 487 334 15 40 504 38 509 6.26e-18 86.7
Msa1356020 MtrunA17_Chr2g0313821 26.144 306 201 9 177 472 199 489 6.55e-18 86.7
Msa1356020 MtrunA17_Chr8g0372711 28.194 227 151 6 251 474 243 460 1.08e-17 85.9
Msa1356020 MtrunA17_Chr5g0445541 39.091 110 60 2 4 106 1 110 1.20e-17 79.7
Msa1356020 MtrunA17_Chr4g0056981 49.296 71 36 0 331 401 1 71 1.62e-17 77.0
Msa1356020 MtrunA17_Chr6g0472221 23.571 420 288 12 65 472 101 499 2.24e-17 85.1
Msa1356020 MtrunA17_Chr8g0351401 24.711 433 259 18 105 497 100 505 3.37e-17 84.3
Msa1356020 MtrunA17_Chr8g0373441 23.543 429 278 18 11 423 9 403 5.43e-17 83.2
Msa1356020 MtrunA17_Chr6g0472171 37.778 135 73 6 362 489 21 151 7.12e-17 78.2
Msa1356020 MtrunA17_Chr8g0351441 23.898 431 277 15 105 504 99 509 7.40e-17 83.2
Msa1356020 MtrunA17_Chr6g0478161 21.694 484 319 17 11 471 18 464 1.08e-16 82.8
Msa1356020 MtrunA17_Chr8g0351421 23.821 424 286 13 105 504 100 510 1.12e-16 82.8
Msa1356020 MtrunA17_Chr3g0089351 29.614 233 142 8 248 474 155 371 1.42e-16 81.6
Msa1356020 MtrunA17_Chr8g0341951 22.016 486 310 21 11 470 4 446 2.70e-16 81.3
Msa1356020 MtrunA17_Chr8g0351311 23.577 369 258 11 125 478 130 489 2.86e-16 81.6
Msa1356020 MtrunA17_Chr3g0141801 26.378 254 158 9 228 472 224 457 3.24e-16 81.3
Msa1356020 MtrunA17_Chr7g0219961 23.060 464 304 15 18 470 15 436 3.69e-16 80.9
Msa1356020 MtrunA17_Chr3g0089361 28.664 307 169 13 180 474 185 453 4.07e-16 80.9
Msa1356020 MtrunA17_Chr5g0431601 40.964 83 48 1 71 153 1 82 5.21e-16 73.2
Msa1356020 MtrunA17_Chr7g0235261 23.041 434 296 16 55 475 78 486 5.62e-16 80.5
Msa1356020 MtrunA17_Chr1g0193811 20.607 461 327 14 55 503 82 515 6.57e-16 80.5
Msa1356020 MtrunA17_Chr3g0128461 24.919 309 205 7 177 477 213 502 7.97e-16 80.1
Msa1356020 MtrunA17_Chr8g0372411 26.364 220 156 3 254 470 236 452 9.10e-16 79.7
Msa1356020 MtrunA17_Chr4g0063221 22.642 318 208 7 171 472 197 492 1.89e-15 79.0
Msa1356020 MtrunA17_Chr1g0182861 38.983 118 64 4 362 475 26 139 1.99e-15 73.9
Msa1356020 MtrunA17_Chr1g0204271 21.522 381 250 10 125 477 124 483 2.27e-15 78.6
Msa1356020 MtrunA17_Chr5g0408181 21.946 483 314 17 7 472 1 437 2.39e-15 78.6
Msa1356020 MtrunA17_Chr3g0107511 23.124 493 302 16 8 470 4 449 2.76e-15 78.2
Msa1356020 MtrunA17_Chr8g0351391 21.833 371 254 12 125 474 130 485 3.70e-15 78.2
Msa1356020 MtrunA17_Chr3g0113321 22.814 469 290 15 27 470 20 441 4.08e-15 77.8
Msa1356020 MtrunA17_Chr1g0154731 23.826 298 202 7 177 470 198 474 4.59e-15 77.8
Msa1356020 MtrunA17_Chr5g0397971 21.921 479 319 16 12 471 2 444 5.69e-15 77.4
Msa1356020 MtrunA17_Chr8g0381561 45.455 88 43 3 362 449 9 91 1.53e-14 70.5
Msa1356020 MtrunA17_Chr1g0184461 22.462 463 294 16 40 468 40 471 1.60e-14 75.9
Msa1356020 MtrunA17_Chr2g0280051 30.178 169 112 3 1 163 36 204 2.03e-14 74.3
Msa1356020 MtrunA17_Chr5g0443401 23.368 475 306 18 19 472 14 451 2.88e-14 75.1
Msa1356020 MtrunA17_Chr1g0164321 23.485 264 180 8 231 475 263 523 3.39e-14 75.1
Msa1356020 MtrunA17_Chr7g0260821 22.088 498 315 19 40 496 40 505 7.43e-14 73.9
Msa1356020 MtrunA17_Chr8g0383801 49.057 53 25 1 407 457 3 55 9.92e-14 67.0
Msa1356020 MtrunA17_Chr7g0248991 31.933 119 79 2 305 423 235 351 1.18e-13 72.4
Msa1356020 MtrunA17_Chr2g0280001 30.178 169 112 3 1 163 26 194 1.89e-13 69.7
Msa1356020 MtrunA17_Chr5g0429651 26.606 218 135 7 304 504 299 508 1.95e-13 72.8
Msa1356020 MtrunA17_Chr7g0260831 20.860 465 298 16 40 468 39 469 3.38e-13 72.0
Msa1356020 MtrunA17_Chr4g0004481 25.121 207 143 5 251 449 240 442 3.97e-13 71.6
Msa1356020 MtrunA17_Chr1g0163451 25.197 254 154 9 238 469 255 494 4.62e-13 71.6
Msa1356020 MtrunA17_Chr8g0334941 28.962 183 120 5 308 482 131 311 5.58e-13 70.1
Msa1356020 MtrunA17_Chr6g0449341 20.158 506 331 21 6 465 51 529 2.24e-12 69.3
Msa1356020 MtrunA17_Chr5g0404861 31.933 119 78 2 352 470 18 133 2.32e-12 65.1
Msa1356020 MtrunA17_Chr7g0226771 22.811 491 306 17 12 475 4 448 2.37e-12 68.9
Msa1356020 MtrunA17_Chr1g0176861 41.176 85 48 1 11 93 10 94 3.44e-12 62.8
Msa1356020 MtrunA17_Chr4g0076181 40.789 76 45 0 71 146 1 76 4.32e-12 64.3
Msa1356020 MtrunA17_Chr4g0000151 35.833 120 65 5 355 472 5 114 4.48e-12 63.9
Msa1356020 MtrunA17_Chr3g0086671 50.877 57 28 0 205 261 18 74 1.42e-11 62.4
Msa1356020 MtrunA17_Chr5g0446131 23.625 309 205 11 177 472 197 487 2.30e-11 66.2
Msa1356020 MtrunA17_Chr3g0104351 26.966 178 114 5 304 465 305 482 2.81e-11 65.9
Msa1356020 MtrunA17_Chr4g0014051 22.967 418 286 13 66 469 103 498 2.90e-11 65.9
Msa1356020 MtrunA17_Chr6g0449351 25.316 237 163 8 238 464 197 429 2.99e-11 65.5
Msa1356020 MtrunA17_Chr2g0314771 24.074 162 117 2 71 230 1 158 7.74e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356020 AT5G07990.1 43.701 508 270 7 15 512 9 510 2.39e-148 435
Msa1356020 AT2G40890.1 37.154 506 306 4 11 510 2 501 9.23e-124 372
Msa1356020 AT5G06900.1 37.354 514 306 7 1 512 1 500 5.19e-120 362
Msa1356020 AT5G57260.1 38.542 480 279 6 30 500 24 496 2.55e-118 358
Msa1356020 AT3G26280.1 38.384 495 286 9 22 506 18 503 3.39e-117 355
Msa1356020 AT3G26280.2 38.384 495 286 9 22 506 35 520 4.43e-117 355
Msa1356020 AT2G45550.1 39.158 475 270 7 26 490 28 493 4.26e-116 352
Msa1356020 AT3G26330.1 39.050 484 272 9 30 504 26 495 4.70e-116 352
Msa1356020 AT5G25180.1 37.500 496 293 9 12 500 4 489 1.31e-115 350
Msa1356020 AT3G26170.1 36.255 502 300 10 11 500 4 497 2.21e-115 350
Msa1356020 AT4G31500.1 37.967 482 280 8 23 494 16 488 3.28e-115 350
Msa1356020 AT4G31940.1 38.178 516 288 10 19 510 15 523 3.73e-115 350
Msa1356020 AT1G13080.1 37.475 491 289 8 20 500 15 497 1.27e-114 348
Msa1356020 AT1G13110.1 36.926 501 302 8 9 500 4 499 6.81e-114 346
Msa1356020 AT5G25120.1 37.980 495 283 10 14 500 11 489 7.46e-114 346
Msa1356020 AT2G45560.1 37.630 481 289 5 26 500 28 503 1.13e-113 346
Msa1356020 AT3G26310.1 36.062 513 302 8 1 504 1 496 1.43e-113 345
Msa1356020 AT3G48280.1 35.306 490 303 4 19 506 13 490 1.51e-113 345
Msa1356020 AT4G12300.1 38.207 513 306 7 3 510 9 515 1.84e-113 345
Msa1356020 AT3G48310.1 35.881 471 287 4 33 501 29 486 2.58e-113 344
Msa1356020 AT2G45570.1 39.957 463 266 5 45 500 47 504 4.65e-113 344
Msa1356020 AT3G26320.1 36.217 497 298 8 20 508 15 500 1.76e-112 342
Msa1356020 AT3G26180.1 36.032 494 297 10 18 500 12 497 2.06e-112 342
Msa1356020 AT3G26300.1 36.179 492 300 6 15 500 10 493 2.86e-112 342
Msa1356020 AT4G13770.1 35.903 493 297 8 20 502 14 497 1.99e-110 337
Msa1356020 AT3G48270.1 35.669 471 286 6 30 497 25 481 2.92e-110 337
Msa1356020 AT5G25140.1 36.089 496 299 7 12 500 5 489 3.31e-110 337
Msa1356020 AT5G25130.1 36.492 496 298 8 12 500 4 489 4.15e-110 336
Msa1356020 AT1G01280.1 36.192 478 286 7 45 511 41 510 1.32e-109 335
Msa1356020 AT3G26270.1 36.831 486 289 10 24 500 20 496 2.00e-109 335
Msa1356020 AT1G33720.1 37.349 498 290 9 13 497 12 500 3.87e-109 334
Msa1356020 AT4G31970.1 37.209 516 294 9 18 510 14 522 7.14e-109 334
Msa1356020 AT3G48320.1 34.719 481 299 4 19 497 15 482 9.69e-108 330
Msa1356020 AT4G37400.1 39.525 463 264 8 45 504 40 489 7.05e-107 328
Msa1356020 AT4G12320.1 37.475 499 298 8 15 507 23 513 7.08e-107 329
Msa1356020 AT5G44620.1 37.100 469 287 4 45 510 55 518 1.02e-106 328
Msa1356020 AT5G57220.1 37.602 492 286 8 16 504 10 483 1.09e-106 327
Msa1356020 AT4G36220.1 35.908 479 282 7 43 505 47 516 1.77e-106 328
Msa1356020 AT3G48290.1 35.504 476 292 4 24 497 21 483 3.12e-106 326
Msa1356020 AT4G37430.1 37.376 503 282 12 15 504 10 492 6.55e-106 326
Msa1356020 AT3G26200.1 36.756 487 290 10 27 503 19 497 1.47e-104 322
Msa1356020 AT3G26210.1 36.420 486 298 6 21 500 16 496 2.00e-104 322
Msa1356020 AT4G13310.1 35.010 477 295 5 27 497 23 490 2.13e-104 322
Msa1356020 AT3G48300.1 36.927 436 260 4 38 471 31 453 2.87e-104 321
Msa1356020 AT3G48300.2 36.927 436 260 4 38 471 33 455 3.04e-104 321
Msa1356020 AT3G26150.1 34.851 505 303 9 11 500 4 497 3.59e-104 321
Msa1356020 AT3G26190.1 37.190 484 286 9 27 500 19 494 3.87e-104 321
Msa1356020 AT1G74550.1 34.064 502 298 7 18 510 9 486 1.47e-103 319
Msa1356020 AT2G30770.1 34.534 472 290 7 33 497 30 489 1.16e-102 317
Msa1356020 AT5G04330.1 35.983 478 292 8 37 505 33 505 2.61e-102 317
Msa1356020 AT3G26160.1 35.060 502 306 10 11 500 4 497 1.47e-101 315
Msa1356020 AT3G48290.2 34.263 502 289 6 24 497 21 509 1.53e-101 315
Msa1356020 AT4G22710.1 36.910 466 284 8 45 507 62 520 2.50e-101 315
Msa1356020 AT4G22690.1 36.695 466 285 8 45 507 93 551 2.31e-100 313
Msa1356020 AT3G61040.1 37.179 468 281 6 37 500 34 492 6.06e-100 310
Msa1356020 AT4G31950.1 36.622 527 288 12 11 510 4 511 1.03e-99 310
Msa1356020 AT2G02580.1 36.417 508 300 8 1 500 1 493 1.20e-99 310
Msa1356020 AT4G12330.1 35.760 467 288 5 45 507 55 513 2.04e-99 310
Msa1356020 AT3G26290.2 36.511 493 288 9 27 508 35 513 2.78e-99 309
Msa1356020 AT3G26290.1 36.511 493 288 9 27 508 22 500 2.85e-99 308
Msa1356020 AT3G44250.1 37.037 486 283 8 27 500 19 493 6.22e-98 305
Msa1356020 AT1G11610.2 35.684 468 286 6 33 495 30 487 1.29e-97 304
Msa1356020 AT3G25180.1 36.062 513 307 9 13 512 10 514 1.31e-97 305
Msa1356020 AT2G30750.1 35.032 471 291 6 32 497 29 489 1.53e-97 304
Msa1356020 AT2G45580.1 35.931 462 284 5 46 500 48 504 2.41e-97 304
Msa1356020 AT5G67310.1 35.294 493 290 12 13 497 21 492 3.18e-97 303
Msa1356020 AT4G13290.1 34.172 477 291 7 27 497 24 483 3.31e-97 303
Msa1356020 AT4G37410.1 34.818 494 303 10 16 504 10 489 3.66e-97 303
Msa1356020 AT4G37330.1 36.095 507 280 13 11 504 10 485 3.82e-97 303
Msa1356020 AT1G11610.1 35.532 470 288 6 33 497 30 489 4.18e-97 303
Msa1356020 AT3G26230.1 34.400 500 307 10 13 500 3 493 4.39e-97 303
Msa1356020 AT1G13090.2 35.358 461 271 8 27 473 19 466 5.31e-97 302
Msa1356020 AT4G12310.1 36.752 468 286 6 45 507 53 515 1.04e-96 303
Msa1356020 AT4G37360.1 35.671 499 291 11 16 504 10 488 1.49e-96 301
Msa1356020 AT4G37370.1 35.211 497 294 12 15 504 11 486 3.64e-96 300
Msa1356020 AT3G53280.1 36.570 484 287 9 27 500 19 492 5.17e-96 300
Msa1356020 AT5G24950.1 33.404 470 299 6 33 497 29 489 1.71e-95 298
Msa1356020 AT5G24960.1 36.157 484 295 6 25 503 22 496 2.59e-95 298
Msa1356020 AT5G36220.1 33.929 504 304 11 13 504 8 494 1.49e-94 296
Msa1356020 AT2G24180.1 34.728 478 290 9 31 500 31 494 3.64e-94 295
Msa1356020 AT4G37320.1 34.004 497 301 10 15 504 12 488 4.45e-94 295
Msa1356020 AT1G74540.1 33.735 498 295 10 13 498 6 480 5.59e-94 295
Msa1356020 AT3G26220.1 36.473 499 294 11 15 500 8 496 1.12e-93 294
Msa1356020 AT3G52970.1 34.406 497 308 9 19 503 22 512 1.26e-93 294
Msa1356020 AT3G53300.1 37.053 475 281 10 36 500 28 494 2.49e-93 293
Msa1356020 AT4G37310.1 33.399 509 316 11 6 504 5 500 2.38e-92 291
Msa1356020 AT3G28740.1 36.983 484 277 13 30 504 33 497 4.68e-91 288
Msa1356020 AT2G42250.1 32.790 491 299 10 36 512 41 514 2.63e-90 286
Msa1356020 AT3G52970.2 33.464 511 308 10 19 503 22 526 2.73e-90 286
Msa1356020 AT4G37340.1 33.996 503 297 13 12 504 12 489 3.19e-90 285
Msa1356020 AT3G32047.1 34.305 446 273 8 47 485 53 485 1.82e-89 283
Msa1356020 AT1G13100.1 36.601 459 268 9 27 473 19 466 2.49e-89 282
Msa1356020 AT1G33730.1 38.978 372 211 5 134 497 1 364 2.68e-88 276
Msa1356020 AT1G33730.2 38.978 372 211 5 134 497 1 364 2.68e-88 276
Msa1356020 AT3G26830.1 32.520 492 304 10 13 487 1 481 5.22e-88 279
Msa1356020 AT2G23220.1 35.730 459 265 13 23 471 35 473 1.15e-87 279
Msa1356020 AT2G25160.1 34.109 516 308 13 19 512 15 520 7.39e-87 277
Msa1356020 AT5G42590.1 33.533 501 314 9 13 506 9 497 3.60e-86 275
Msa1356020 AT2G23190.1 34.904 467 273 13 16 471 56 502 8.93e-86 275
Msa1356020 AT1G33720.4 38.667 375 212 7 132 497 3 368 1.14e-84 267
Msa1356020 AT1G33720.3 38.667 375 212 7 132 497 3 368 1.14e-84 267
Msa1356020 AT1G33720.5 38.667 375 212 7 132 497 3 368 1.14e-84 267
Msa1356020 AT5G35715.1 34.318 440 271 9 71 500 1 432 1.23e-84 269
Msa1356020 AT5G06905.1 31.250 496 316 8 12 490 10 497 5.72e-84 270
Msa1356020 AT4G15360.1 30.769 507 332 10 13 512 17 511 3.62e-83 268
Msa1356020 AT5G10610.1 30.478 502 322 11 12 503 5 489 1.96e-82 265
Msa1356020 AT3G20090.2 31.466 464 297 9 50 504 58 509 2.69e-82 265
Msa1356020 AT1G33720.2 36.683 398 213 7 132 497 3 393 8.17e-82 260
Msa1356020 AT3G20950.1 31.068 515 325 13 15 511 17 519 5.52e-81 262
Msa1356020 AT1G50520.1 31.545 466 298 8 45 500 52 506 9.55e-81 261
Msa1356020 AT3G20940.1 30.655 473 306 9 24 485 28 489 4.50e-80 259
Msa1356020 AT3G20110.1 29.779 497 330 9 13 504 15 497 6.99e-80 258
Msa1356020 AT5G10600.1 29.051 506 323 8 12 503 22 505 1.07e-79 258
Msa1356020 AT2G45580.2 38.873 355 207 4 151 500 1 350 1.51e-79 253
Msa1356020 AT2G46660.1 35.076 459 268 13 35 482 69 508 1.95e-79 258
Msa1356020 AT2G14100.1 31.760 466 291 12 51 505 59 508 1.38e-78 255
Msa1356020 AT3G61880.1 34.433 485 293 12 30 504 60 529 1.93e-78 255
Msa1356020 AT1G66540.1 35.917 387 225 7 124 504 6 375 2.74e-78 250
Msa1356020 AT3G61880.2 34.433 485 293 12 30 504 60 529 6.61e-78 254
Msa1356020 AT3G20130.1 30.926 443 286 9 51 485 58 488 7.57e-78 253
Msa1356020 AT5G47990.1 31.263 467 300 8 47 504 53 507 9.02e-78 253
Msa1356020 AT4G15330.1 29.939 491 308 11 18 488 11 485 1.63e-77 252
Msa1356020 AT3G20120.4 31.712 473 293 9 51 508 57 514 3.85e-77 251
Msa1356020 AT3G20080.2 31.111 495 298 13 31 504 37 509 3.20e-75 246
Msa1356020 AT3G20080.1 31.111 495 298 13 31 504 37 509 3.20e-75 246
Msa1356020 AT3G20140.1 30.085 472 312 9 23 488 28 487 9.88e-75 245
Msa1356020 AT3G20100.1 31.089 505 316 10 13 500 15 504 9.88e-75 245
Msa1356020 AT4G15350.1 31.057 454 288 11 47 488 45 485 1.91e-74 244
Msa1356020 AT1G01190.2 32.525 495 301 14 24 504 61 536 5.07e-74 244
Msa1356020 AT1G01190.1 32.220 509 304 15 10 504 50 531 5.44e-74 244
Msa1356020 AT1G13080.2 35.526 380 226 9 131 500 9 379 7.05e-74 239
Msa1356020 AT1G50560.1 30.932 472 300 10 47 505 54 512 7.90e-74 243
Msa1356020 AT4G13310.2 33.952 377 235 4 27 398 23 390 2.67e-73 238
Msa1356020 AT5G09970.1 32.432 481 289 16 38 501 71 532 1.92e-72 239
Msa1356020 AT4G39950.1 30.326 521 339 11 7 510 24 537 1.96e-71 237
Msa1356020 AT5G05260.2 30.800 500 311 10 35 510 39 527 2.14e-71 237
Msa1356020 AT4G15380.1 29.480 519 318 12 19 511 15 511 3.02e-71 236
Msa1356020 AT4G39950.2 30.326 521 339 11 7 510 64 577 3.59e-71 238
Msa1356020 AT3G20960.2 28.222 450 304 8 63 504 69 507 1.20e-70 234
Msa1356020 AT1G79370.1 30.410 536 320 14 13 510 18 538 1.66e-69 232
Msa1356020 AT1G58260.1 29.637 523 339 14 11 510 9 525 3.50e-69 231
Msa1356020 AT1G28430.1 28.942 463 305 9 57 508 62 511 4.01e-69 231
Msa1356020 AT2G22330.1 30.512 508 336 11 18 512 38 541 4.51e-68 228
Msa1356020 AT1G66540.2 36.637 333 193 6 173 504 1 316 5.09e-68 222
Msa1356020 AT2G22330.2 30.512 508 336 11 18 512 61 564 6.52e-68 228
Msa1356020 AT3G20130.2 31.034 406 260 9 88 485 67 460 5.33e-67 224
Msa1356020 AT5G42580.1 29.581 453 288 8 56 500 60 489 7.95e-67 224
Msa1356020 AT1G13710.1 30.705 482 295 13 38 504 55 512 9.69e-67 224
Msa1356020 AT2G27000.1 29.916 478 301 12 50 511 54 513 1.33e-65 221
Msa1356020 AT4G15330.2 28.106 491 289 12 18 488 11 457 1.88e-65 220
Msa1356020 AT1G74110.1 31.546 485 301 13 38 504 65 536 6.88e-65 220
Msa1356020 AT4G20240.1 30.657 411 263 7 27 429 24 420 1.25e-64 217
Msa1356020 AT5G05260.1 30.800 500 279 13 35 510 39 495 1.59e-64 218
Msa1356020 AT3G26180.2 39.453 256 149 4 248 500 111 363 9.69e-64 212
Msa1356020 AT3G26180.2 43.137 102 58 0 18 119 12 113 1.32e-22 99.8
Msa1356020 AT5G36220.2 34.393 346 210 6 159 504 20 348 1.14e-63 211
Msa1356020 AT3G20090.1 32.312 359 223 8 138 488 8 354 1.18e-62 209
Msa1356020 AT5G24960.2 35.526 380 232 5 25 400 22 392 1.23e-62 210
Msa1356020 AT3G20120.2 32.143 392 236 9 132 508 2 378 4.40e-62 208
Msa1356020 AT3G20120.3 32.143 392 236 9 132 508 2 378 4.40e-62 208
Msa1356020 AT3G20120.1 32.143 392 236 9 132 508 2 378 4.40e-62 208
Msa1356020 AT3G53290.1 34.597 422 235 11 89 500 11 401 1.33e-61 207
Msa1356020 AT1G16400.1 29.222 527 340 14 9 510 14 532 2.70e-61 210
Msa1356020 AT3G20960.1 28.019 414 279 8 99 504 2 404 3.33e-61 207
Msa1356020 AT2G05180.1 28.878 419 278 7 19 424 15 426 2.47e-59 202
Msa1356020 AT1G64940.1 29.709 515 322 15 14 504 10 508 8.58e-59 203
Msa1356020 AT1G16410.1 28.916 498 324 11 35 510 44 533 9.68e-59 203
Msa1356020 AT3G20080.4 31.250 384 240 10 132 504 2 372 2.68e-58 198
Msa1356020 AT3G20080.5 31.250 384 240 10 132 504 2 372 2.68e-58 198
Msa1356020 AT3G20080.6 31.250 384 240 10 132 504 2 372 2.68e-58 198
Msa1356020 AT3G20080.3 31.250 384 240 10 132 504 2 372 2.68e-58 198
Msa1356020 AT1G11600.1 31.612 484 292 15 13 470 8 478 3.69e-56 196
Msa1356020 AT4G20240.2 30.709 381 243 6 27 400 24 390 3.75e-56 193
Msa1356020 AT1G64950.1 29.659 499 298 15 36 504 32 507 5.53e-54 190
Msa1356020 AT2G30490.1 30.081 492 299 13 14 480 9 480 8.05e-54 189
Msa1356020 AT3G61040.2 31.622 370 240 6 37 402 34 394 9.49e-54 186
Msa1356020 AT2G27010.1 27.195 467 296 13 50 504 50 484 4.55e-53 187
Msa1356020 AT2G45580.3 31.667 360 234 6 46 398 48 402 4.86e-53 185
Msa1356020 AT3G10560.1 26.996 526 343 16 2 505 7 513 2.38e-52 186
Msa1356020 AT3G25180.2 30.691 391 253 8 13 390 10 395 2.56e-52 183
Msa1356020 AT2G12190.1 29.960 504 298 16 27 498 23 503 2.65e-52 186
Msa1356020 AT5G04630.1 27.812 489 316 15 6 470 1 476 3.97e-52 185
Msa1356020 AT1G64930.1 28.854 506 294 16 36 504 32 508 9.26e-52 184
Msa1356020 AT2G25160.2 31.910 398 244 11 19 396 15 405 1.18e-50 179
Msa1356020 AT3G20935.1 32.416 327 185 9 188 488 1 317 3.92e-50 175
Msa1356020 AT5G35917.1 27.600 500 286 14 35 510 41 488 4.04e-48 174
Msa1356020 AT3G03470.1 28.657 499 302 16 16 485 16 489 6.35e-46 168
Msa1356020 AT5G61320.1 28.879 464 283 14 57 504 55 487 5.46e-44 162
Msa1356020 AT5G04660.1 25.983 458 308 13 63 505 71 512 6.70e-44 162
Msa1356020 AT3G10570.1 24.401 459 325 12 57 505 67 513 3.48e-41 155
Msa1356020 AT1G64900.1 29.314 481 304 15 44 504 39 503 4.63e-41 154
Msa1356020 AT5G25900.1 24.646 495 347 11 22 504 27 507 1.12e-40 154
Msa1356020 AT1G16410.2 28.267 375 247 9 36 393 45 414 1.07e-38 146
Msa1356020 AT1G13090.1 30.717 293 173 8 27 308 19 292 6.50e-37 138
Msa1356020 AT3G53305.1 45.455 143 73 1 343 485 175 312 3.86e-32 126
Msa1356020 AT3G53305.1 33.540 161 102 2 71 229 1 158 3.14e-19 89.4
Msa1356020 AT2G45560.2 28.626 262 179 4 26 281 28 287 2.44e-31 124
Msa1356020 AT2G45560.3 28.837 215 148 3 26 237 28 240 1.93e-26 108
Msa1356020 AT4G20235.1 26.182 275 168 6 15 281 7 254 1.16e-23 102
Msa1356020 AT4G20235.1 32.847 137 78 3 338 472 206 330 3.99e-17 83.2
Msa1356020 AT5G35920.1 37.342 158 80 3 362 510 6 153 1.34e-23 97.4
Msa1356020 AT2G32440.2 25.870 460 296 16 20 468 28 453 1.39e-23 104
Msa1356020 AT2G32440.1 25.870 460 296 16 20 468 28 453 1.39e-23 104
Msa1356020 AT2G26170.1 24.180 488 318 16 16 471 24 491 1.72e-22 101
Msa1356020 AT1G05160.2 24.512 461 303 15 20 468 29 456 1.87e-22 100
Msa1356020 AT1G05160.1 24.512 461 303 15 20 468 29 456 1.87e-22 100
Msa1356020 AT3G53130.1 23.583 441 300 11 50 472 91 512 2.53e-22 100
Msa1356020 AT5G24910.1 26.667 375 222 13 125 472 157 505 1.99e-21 97.8
Msa1356020 AT3G13730.1 24.558 452 299 17 30 470 45 465 2.33e-21 97.4
Msa1356020 AT4G27710.1 23.092 511 330 17 12 487 23 505 4.58e-21 96.7
Msa1356020 AT3G13730.2 24.598 435 286 17 30 453 45 448 2.95e-20 94.0
Msa1356020 AT2G26710.1 27.244 312 178 11 180 472 207 488 4.86e-20 93.6
Msa1356020 AT3G30180.1 24.893 466 304 15 13 470 11 438 1.32e-19 92.0
Msa1356020 AT1G19630.1 22.796 465 305 17 23 472 23 448 2.75e-19 91.3
Msa1356020 AT3G14620.1 25.817 306 197 9 176 472 204 488 5.29e-19 90.5
Msa1356020 AT1G19630.3 23.210 461 296 18 23 468 23 440 1.48e-18 88.6
Msa1356020 AT1G11680.1 24.949 493 317 17 9 482 10 468 1.60e-18 89.0
Msa1356020 AT4G15110.1 28.571 196 111 4 305 472 356 550 2.31e-18 88.6
Msa1356020 AT5G45340.1 24.197 467 299 17 17 472 14 436 2.48e-18 88.2
Msa1356020 AT5G38450.1 21.933 538 349 17 9 503 6 515 4.75e-18 87.4
Msa1356020 AT1G31800.1 30.000 170 115 3 305 472 374 541 7.51e-18 87.0
Msa1356020 AT2G44890.1 23.929 397 266 15 107 478 101 486 1.09e-17 86.3
Msa1356020 AT2G26170.2 26.728 217 155 4 258 471 193 408 1.75e-17 85.1
Msa1356020 AT5G52400.1 29.646 226 147 6 231 452 255 472 3.45e-17 84.7
Msa1356020 AT5G38970.1 22.609 460 318 13 15 470 13 438 6.32e-17 83.6
Msa1356020 AT1G12740.1 22.746 488 297 18 12 470 7 443 9.49e-17 83.2
Msa1356020 AT2G46950.1 24.773 440 284 15 55 477 139 548 1.01e-16 83.6
Msa1356020 AT1G47620.1 23.684 380 243 16 128 479 135 495 2.11e-16 82.4
Msa1356020 AT5G24900.2 23.204 362 256 10 122 472 33 383 3.07e-16 81.3
Msa1356020 AT1G67110.1 22.885 520 338 17 15 503 22 509 3.15e-16 81.6
Msa1356020 AT4G39510.1 22.546 377 257 12 116 469 111 475 7.38e-16 80.5
Msa1356020 AT2G44890.2 23.664 393 254 14 107 478 101 468 8.41e-16 80.5
Msa1356020 AT3G14610.1 21.718 419 299 11 63 472 87 485 2.02e-15 79.3
Msa1356020 AT1G19630.2 22.596 416 273 15 23 423 23 404 3.21e-15 78.2
Msa1356020 AT1G12740.2 22.312 493 299 18 12 470 7 449 4.22e-15 78.2
Msa1356020 AT4G36380.1 23.333 450 298 17 36 470 69 486 6.70e-15 77.8
Msa1356020 AT3G50660.1 22.691 498 303 19 27 477 30 492 1.28e-14 76.6
Msa1356020 AT3G44970.1 26.066 211 137 6 301 504 280 478 1.37e-14 76.6
Msa1356020 AT1G12740.4 22.470 494 297 19 12 470 7 449 1.41e-14 76.6
Msa1356020 AT2G46960.2 22.691 498 311 17 16 470 21 487 1.83e-14 76.3
Msa1356020 AT1G24540.1 20.502 478 320 18 31 469 34 490 2.77e-14 75.9
Msa1356020 AT1G13140.1 22.372 371 257 11 128 475 138 500 4.15e-14 75.1
Msa1356020 AT2G42850.1 32.308 130 82 3 343 472 334 457 7.39e-14 74.3
Msa1356020 AT5G05690.3 27.746 173 120 4 301 470 152 322 9.02e-14 73.2
Msa1356020 AT3G26125.1 23.247 271 176 6 231 475 244 508 9.23e-14 74.3
Msa1356020 AT2G46960.1 23.333 300 213 8 173 470 87 371 9.77e-14 73.6
Msa1356020 AT5G05690.1 22.678 463 280 16 35 470 30 441 1.07e-13 73.6
Msa1356020 AT2G29090.3 28.488 172 113 3 305 472 196 361 1.23e-13 73.2
Msa1356020 AT5G38970.2 25.455 220 153 4 254 470 146 357 1.25e-13 73.2
Msa1356020 AT5G38970.4 25.455 220 153 4 254 470 146 357 1.25e-13 73.2
Msa1356020 AT1G78490.1 24.153 443 258 21 36 449 35 428 2.05e-13 72.8
Msa1356020 AT2G29090.2 28.488 172 113 3 305 472 291 456 2.14e-13 72.8
Msa1356020 AT2G29090.1 28.488 172 113 3 305 472 291 456 2.14e-13 72.8
Msa1356020 AT1G13140.2 25.134 187 130 2 299 475 288 474 2.95e-13 72.4
Msa1356020 AT1G63710.1 27.374 179 119 3 298 465 295 473 3.27e-13 72.4
Msa1356020 AT3G14650.1 23.355 304 206 10 177 472 201 485 3.92e-13 72.0
Msa1356020 AT5G08250.2 20.980 510 331 19 4 474 37 513 5.75e-13 71.6
Msa1356020 AT2G45510.1 21.429 406 265 13 107 478 101 486 8.33e-13 71.2
Msa1356020 AT1G13150.1 23.077 377 222 13 128 461 131 482 2.89e-12 69.3
Msa1356020 AT1G65340.1 23.308 266 183 7 227 479 226 483 3.15e-12 69.3
Msa1356020 AT5G58860.1 26.705 176 115 4 304 465 299 474 4.04e-12 68.9
Msa1356020 AT3G14690.2 22.697 304 208 11 177 472 236 520 7.10e-12 68.2
Msa1356020 AT3G14690.1 22.697 304 208 11 177 472 201 485 8.67e-12 67.8
Msa1356020 AT2G45970.1 27.439 164 105 5 304 453 301 464 1.55e-11 67.0
Msa1356020 AT5G52320.2 24.291 247 167 7 238 472 237 475 1.61e-11 67.0
Msa1356020 AT5G52320.1 24.291 247 167 7 238 472 237 475 1.73e-11 67.0
Msa1356020 AT4G39490.1 20.792 303 197 9 193 472 207 489 1.84e-11 67.0
Msa1356020 AT2G21910.1 21.662 337 231 11 164 479 162 486 2.08e-11 66.6
Msa1356020 AT1G55940.2 24.201 219 150 7 263 472 256 467 3.36e-11 65.9
Msa1356020 AT1G57750.1 20.455 264 188 7 243 495 245 497 4.35e-11 65.5
Msa1356020 AT1G55940.1 25.888 197 128 8 263 449 256 444 4.85e-11 65.5
Msa1356020 AT1G01600.1 29.379 177 109 6 304 465 304 479 7.77e-11 65.1

Find 136 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTATAGGCCATGGTTT+TGG 0.192554 tig0015366:+48788 None:intergenic
CTTAATGGAATTCTCAATAT+TGG 0.195327 tig0015366:-48254 Msa1356020:CDS
TTAATAAGGTTGAGAATAAT+TGG 0.200580 tig0015366:-46542 Msa1356020:three_prime_UTR
ATTTGTTGCATGGATTTAAT+TGG 0.212022 tig0015366:-46721 Msa1356020:CDS
GAACAAAACATAATTTAATT+TGG 0.241010 tig0015366:+46347 None:intergenic
TTAATGGAATTCTCAATATT+GGG 0.252765 tig0015366:-48253 Msa1356020:CDS
TGGTTACCCTCTTGGTATTA+AGG 0.254204 tig0015366:-46765 Msa1356020:CDS
AATTGTACAGGCGCCATATT+TGG 0.264279 tig0015366:+48911 None:intergenic
ATGTACATGGTTTAGACTTT+TGG 0.265570 tig0015366:+46243 None:intergenic
ACAAGAACTATAGTCCCTTT+AGG 0.282589 tig0015366:+46932 None:intergenic
ACAATTATTGCAAGTTAAAC+TGG 0.288881 tig0015366:-46300 Msa1356020:three_prime_UTR
TATGGCGCCTGTACAATTAT+TGG 0.288886 tig0015366:-48906 Msa1356020:CDS
CTATAGTTCTTGTTAATACT+TGG 0.289373 tig0015366:-46922 Msa1356020:CDS
GAAGAGCTAGATAGAGTAAT+AGG 0.289848 tig0015366:-47103 Msa1356020:CDS
CCAAAACCATGGCCTATAAT+TGG 0.289937 tig0015366:-48788 Msa1356020:CDS
CAAGAACTATAGTCCCTTTA+GGG 0.292578 tig0015366:+46933 None:intergenic
GTCACAAAATCGACCAAATA+TGG 0.299155 tig0015366:-48924 Msa1356020:exon
TCCTAATCTTGAAGTCAAAT+TGG 0.299364 tig0015366:-48048 Msa1356020:CDS
TGCAAGAGATTCTGAGGTTT+GGG 0.300739 tig0015366:-46894 Msa1356020:CDS
ATTACCTAATAATGTGAAAA+AGG 0.307910 tig0015366:-46696 Msa1356020:CDS
AGGTTGAGATTTCCAATTAT+AGG 0.311130 tig0015366:+48776 None:intergenic
CTACGGGCTTGGCGCCAATA+TGG 0.317357 tig0015366:+48530 None:intergenic
TGCCGGCCGGCCCAAATTAT+CGG 0.320835 tig0015366:-48606 Msa1356020:CDS
TTTATGCCTGAGAGGTTTCT+TGG 0.325627 tig0015366:-46857 Msa1356020:CDS
TAAGGTGATTCAAACAAGTT+TGG 0.327813 tig0015366:-46747 Msa1356020:CDS
CCCATCATGCATCTATATTT+CGG 0.334601 tig0015366:-48701 Msa1356020:CDS
GAGTAATAGGAAAAGATAGA+TGG 0.343008 tig0015366:-47090 Msa1356020:CDS
TTGCAAGAGATTCTGAGGTT+TGG 0.343419 tig0015366:-46895 Msa1356020:CDS
GGTAAGGATATAGATGTAAA+AGG 0.344338 tig0015366:-46836 Msa1356020:CDS
GTTGCTTTCTTGAAGATCTC+TGG 0.348120 tig0015366:+47127 None:intergenic
TAGGTTTATGGAACATGTAT+TGG 0.351060 tig0015366:-48153 Msa1356020:CDS
AACATCTTCTTAAACTCATC+AGG 0.353010 tig0015366:+48293 None:intergenic
GGCCGGCAAGGGTGGCGTCA+TGG 0.369639 tig0015366:+48621 None:intergenic
TTTCCTCAGGACTTAATTGC+CGG 0.371223 tig0015366:-47208 Msa1356020:intron
GCCGGCAAGGGTGGCGTCAT+GGG 0.377234 tig0015366:+48622 None:intergenic
TACCATTTGGTGCTGGTAGA+AGG 0.388274 tig0015366:-46796 Msa1356020:CDS
TCCAATTTGACTTCAAGATT+AGG 0.395610 tig0015366:+48047 None:intergenic
TTAGCAATTGCATAAACATA+AGG 0.399169 tig0015366:+47040 None:intergenic
ATTGGAAATCTCAACCTTAT+CGG 0.400296 tig0015366:-48770 Msa1356020:CDS
CTCTCAGGCATAAATTCATA+TGG 0.403296 tig0015366:+46866 None:intergenic
GGCTCGAAACCTGTCATTGT+GGG 0.404540 tig0015366:-48680 Msa1356020:CDS
AGAGAGGATTGCAAGGTTGA+TGG 0.408823 tig0015366:-46965 Msa1356020:CDS
TGTATTTGTGGCGGCGGAGG+CGG 0.415770 tig0015366:+48825 None:intergenic
ATTATTGGAACTTCCTAGTT+GGG 0.417306 tig0015366:-48891 Msa1356020:CDS
GACATAACTTGGTCTCAATA+TGG 0.420750 tig0015366:-48554 Msa1356020:CDS
GCCTGAGAGGTTTCTTGGTA+AGG 0.426429 tig0015366:-46852 Msa1356020:CDS
AGCCCGTAGAATGTGTCTAT+TGG 0.429910 tig0015366:-48516 Msa1356020:CDS
ATAATTTGGGCCGGCCGGCA+AGG 0.436808 tig0015366:+48609 None:intergenic
GGTCTCAATATGGTCCATAT+TGG 0.437990 tig0015366:-48544 Msa1356020:CDS
AGCCGATAATTTGGGCCGGC+CGG 0.445319 tig0015366:+48604 None:intergenic
ATGTGTCCTGGTTACCCTCT+TGG 0.448695 tig0015366:-46773 Msa1356020:CDS
AATTATTGGAACTTCCTAGT+TGG 0.450587 tig0015366:-48892 Msa1356020:CDS
ATTTGTGGCGGCGGAGGCGG+CGG 0.459444 tig0015366:+48828 None:intergenic
TTTGGGCCGGCCGGCAAGGG+TGG 0.462002 tig0015366:+48613 None:intergenic
TAATTTGGGCCGGCCGGCAA+GGG 0.468329 tig0015366:+48610 None:intergenic
GGCCGGCCCAAATTATCGGC+TGG 0.469041 tig0015366:-48602 Msa1356020:CDS
TTAGACTCAAAGTTGAAAGA+TGG 0.479767 tig0015366:+48381 None:intergenic
AGTAATAGGAAAAGATAGAT+GGG 0.487487 tig0015366:-47089 Msa1356020:CDS
CTCAGCAGTAACAGTCGAAT+GGG 0.489297 tig0015366:-47173 Msa1356020:CDS
GATGGTTATGATATCCCTAA+AGG 0.494406 tig0015366:-46947 Msa1356020:CDS
GTTATAAGTCGAATGGTGCT+AGG 0.498619 tig0015366:-48356 Msa1356020:CDS
GAATGATTTGGCTAGTTCTA+CGG 0.503811 tig0015366:+48652 None:intergenic
ATAACTATTCAGACATAACT+TGG 0.504090 tig0015366:-48565 Msa1356020:CDS
GGAGGCGGCGGCTGAAGAGA+AGG 0.504913 tig0015366:+48840 None:intergenic
GATTGTATTTGTGGCGGCGG+AGG 0.505505 tig0015366:+48822 None:intergenic
CTGGTGGTAGATTGTATTTG+TGG 0.511720 tig0015366:+48813 None:intergenic
GGCTCCACAACAATTTCTAA+AGG 0.512638 tig0015366:+46623 None:intergenic
ATGGTTATGATATCCCTAAA+GGG 0.512777 tig0015366:-46946 Msa1356020:CDS
GCAAACAATGTGACCCAACT+AGG 0.513344 tig0015366:+48878 None:intergenic
AGTTTGGCTAATTTGTTGCA+TGG 0.514785 tig0015366:-46731 Msa1356020:CDS
CACAAATACAATCTACCACC+AGG 0.516050 tig0015366:-48812 Msa1356020:CDS
ATAGACACATTCTACGGGCT+TGG 0.517919 tig0015366:+48519 None:intergenic
GGAAGTTCCAATAATTGTAC+AGG 0.521643 tig0015366:+48899 None:intergenic
GCCGAAATATAGATGCATGA+TGG 0.523631 tig0015366:+48700 None:intergenic
TGCTGAGCTCTCCGTCCCTC+CGG 0.524754 tig0015366:+47189 None:intergenic
GAGTAGAGAAAATACTCAAA+GGG 0.524812 tig0015366:+46577 None:intergenic
GATGCGGGAGGGATCCGATA+AGG 0.526962 tig0015366:+48756 None:intergenic
TGAGTAGAGAAAATACTCAA+AGG 0.527453 tig0015366:+46576 None:intergenic
GACAATTGCAAGAGATTCTG+AGG 0.530118 tig0015366:-46900 Msa1356020:CDS
GGATTATGTTGCTAAAGATA+TGG 0.531534 tig0015366:-48099 Msa1356020:CDS
TAATGGAATTCTCAATATTG+GGG 0.532897 tig0015366:-48252 Msa1356020:CDS
TCCTTACCAAGAAACCTCTC+AGG 0.534445 tig0015366:+46851 None:intergenic
ATCCTTCTACCAGCACCAAA+TGG 0.535918 tig0015366:+46794 None:intergenic
GAGTTGTTACCATTTGGTGC+TGG 0.537557 tig0015366:-46803 Msa1356020:CDS
CGGCTCGAAACCTGTCATTG+TGG 0.538946 tig0015366:-48681 Msa1356020:CDS
GTAGATTGTATTTGTGGCGG+CGG 0.538987 tig0015366:+48819 None:intergenic
ACTCCAATAGACACATTCTA+CGG 0.544011 tig0015366:+48513 None:intergenic
AATACCTTTAGAAATTGTTG+TGG 0.545116 tig0015366:-46627 Msa1356020:CDS
CCGAAATATAGATGCATGAT+GGG 0.545375 tig0015366:+48701 None:intergenic
AGATTTCCAATTATAGGCCA+TGG 0.546914 tig0015366:+48782 None:intergenic
GTCCGTGGAGGGATTGATGC+GGG 0.547540 tig0015366:+48741 None:intergenic
GTTTATGGAACATGTATTGG+AGG 0.548653 tig0015366:-48150 Msa1356020:CDS
ACATCTTCTTAAACTCATCA+GGG 0.549656 tig0015366:+48294 None:intergenic
ATTCATTTCTTAGACTTGCA+AGG 0.553866 tig0015366:-48215 Msa1356020:CDS
ATGACGCCACCCTTGCCGGC+CGG 0.557584 tig0015366:-48619 Msa1356020:CDS
TGGAGGAACACATTCAAAGA+AGG 0.561858 tig0015366:-48133 Msa1356020:CDS
AGTTCTAAGAAATATGTACA+TGG 0.565172 tig0015366:+46230 None:intergenic
ACTTGCAAGGTTATGTGAAG+AGG 0.565402 tig0015366:-48202 Msa1356020:CDS
TAAAGATGATCAGCAAGTCT+AGG 0.566360 tig0015366:+46602 None:intergenic
GGACTTAATTGCCGGAGGGA+CGG 0.570498 tig0015366:-47200 Msa1356020:CDS
CTCCCGCATCAATCCCTCCA+CGG 0.572994 tig0015366:-48743 Msa1356020:CDS
CTCCAATAGACACATTCTAC+GGG 0.577856 tig0015366:+48514 None:intergenic
TGATGAGTTTAAGAAGATGT+TGG 0.578294 tig0015366:-48291 Msa1356020:CDS
CGAATGGGCAATCTCCGAGC+TGG 0.578596 tig0015366:-47158 Msa1356020:CDS
TTATAAGTCGAATGGTGCTA+GGG 0.579857 tig0015366:-48355 Msa1356020:CDS
AGTGCCACGAGAAGCTAGAG+AGG 0.580786 tig0015366:-46981 Msa1356020:CDS
TTCCAGCCGATAATTTGGGC+CGG 0.581757 tig0015366:+48600 None:intergenic
GCTCAGCAGTAACAGTCGAA+TGG 0.582159 tig0015366:-47174 Msa1356020:CDS
AAAGGAGGATTTGAATATGG+AGG 0.589725 tig0015366:-46678 Msa1356020:CDS
TCAAAGAAGGAAAGATGTGA+AGG 0.590808 tig0015366:-48120 Msa1356020:CDS
CATATGAATTTATGCCTGAG+AGG 0.591885 tig0015366:-46865 Msa1356020:CDS
TCTAAATGTTATAAGTCGAA+TGG 0.594130 tig0015366:-48363 Msa1356020:CDS
GCTGGTAGAAGGATGTGTCC+TGG 0.598521 tig0015366:-46785 Msa1356020:CDS
GAAGTCAAATTGGAGAGGCA+TGG 0.600980 tig0015366:-48038 Msa1356020:CDS
AGAAGCTAGAGAGGATTGCA+AGG 0.601384 tig0015366:-46972 Msa1356020:CDS
GTGGAGGGATTGATGCGGGA+GGG 0.601819 tig0015366:+48745 None:intergenic
CTCAGGACTTAATTGCCGGA+GGG 0.606704 tig0015366:-47204 Msa1356020:intron
CAATCCTCTCTAGCTTCTCG+TGG 0.607517 tig0015366:+46977 None:intergenic
AGGTTATGTGAAGAGGATGA+AGG 0.612652 tig0015366:-48195 Msa1356020:CDS
TTATGTACTCATAAGACTCG+AGG 0.613191 tig0015366:+48474 None:intergenic
TACCACCAGGCCCAAAACCA+TGG 0.613271 tig0015366:-48799 Msa1356020:CDS
CCTCAGGACTTAATTGCCGG+AGG 0.618733 tig0015366:-47205 Msa1356020:intron
TTATGTTGCTAAAGATATGG+TGG 0.619307 tig0015366:-48096 Msa1356020:CDS
AAGTCTAAGAAATGAATCCA+AGG 0.620156 tig0015366:+48221 None:intergenic
GGCGGCGGCTGAAGAGAAGG+AGG 0.623727 tig0015366:+48843 None:intergenic
TTAATACCAAGAGGGTAACC+AGG 0.629329 tig0015366:+46767 None:intergenic
GTGGTAGATTGTATTTGTGG+CGG 0.645832 tig0015366:+48816 None:intergenic
GAATCACCTTAATACCAAGA+GGG 0.650655 tig0015366:+46759 None:intergenic
TGATTTGGCTAGTTCTACGG+TGG 0.651149 tig0015366:+48655 None:intergenic
CGTGGAGGGATTGATGCGGG+AGG 0.652849 tig0015366:+48744 None:intergenic
TGAATCACCTTAATACCAAG+AGG 0.655364 tig0015366:+46758 None:intergenic
AGTCCGTGGAGGGATTGATG+CGG 0.655981 tig0015366:+48740 None:intergenic
ATCTTGAAGTCAAATTGGAG+AGG 0.656978 tig0015366:-48043 Msa1356020:CDS
AACAATGAGACTACATCCCG+TGG 0.669719 tig0015366:-47014 Msa1356020:CDS
CATCTTCTTAAACTCATCAG+GGG 0.682473 tig0015366:+48295 None:intergenic
CTAGTAGAGAGAGTTAACAA+CGG 0.779889 tig0015366:+46391 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATTTAATAGTATTATTT+AGG + tig0015366:47332-47351 None:intergenic 10.0%
!! TATAAAAAAATATTATCCTT+AGG - tig0015366:47367-47386 Msa1356020:intron 10.0%
!! ATAAAAAAATATTATCCTTA+GGG - tig0015366:47368-47387 Msa1356020:intron 10.0%
!!! TTTTTATTTACTAATTTTAC+AGG - tig0015366:47746-47765 Msa1356020:intron 10.0%
!! GTAATTTCATAATTAAACAA+AGG + tig0015366:47285-47304 None:intergenic 15.0%
!! ATTTAATAGTATTATTTAGG+TGG + tig0015366:47329-47348 None:intergenic 15.0%
!! TAGAATAAATAATTGATGTT+TGG + tig0015366:47644-47663 None:intergenic 15.0%
!! TATGAAATATATAGTATTTG+TGG - tig0015366:47662-47681 Msa1356020:intron 15.0%
!! ATGAAATATATAGTATTTGT+GGG - tig0015366:47663-47682 Msa1356020:intron 15.0%
!! AAAAAAAAATACAGACATAA+GGG + tig0015366:47730-47749 None:intergenic 15.0%
!! AAAAAAAAAATACAGACATA+AGG + tig0015366:47731-47750 None:intergenic 15.0%
!! GAACAAAACATAATTTAATT+TGG + tig0015366:48844-48863 None:intergenic 15.0%
!!! TCTTTTACATAATTGTTAAA+AGG - tig0015366:48920-48939 Msa1356020:exon 15.0%
!! TTAATGGAATTCTCAATATT+GGG - tig0015366:46935-46954 Msa1356020:CDS 20.0%
!! TAAAAAGTTTGATAGGTTTA+TGG - tig0015366:47023-47042 Msa1356020:CDS 20.0%
!!! ATTTTCTTTAGTTCTTTCTT+TGG - tig0015366:47214-47233 Msa1356020:intron 20.0%
!! ATTGAATTCGACAAATTATA+TGG + tig0015366:47482-47501 None:intergenic 20.0%
!!! ATATAATTTGTCGAATTCAA+TGG - tig0015366:47481-47500 Msa1356020:intron 20.0%
!!! TATAATTTGTCGAATTCAAT+GGG - tig0015366:47482-47501 Msa1356020:intron 20.0%
!! CTAATCTCTAAATTATGATT+TGG + tig0015366:47597-47616 None:intergenic 20.0%
!! TGAAATATATAGTATTTGTG+GGG - tig0015366:47664-47683 Msa1356020:intron 20.0%
!!! TAAATTTTGGTCTTGTTAAA+TGG - tig0015366:47889-47908 Msa1356020:intron 20.0%
!!! AAATTTTGGTCTTGTTAAAT+GGG - tig0015366:47890-47909 Msa1356020:intron 20.0%
!! ATTACCTAATAATGTGAAAA+AGG - tig0015366:48492-48511 Msa1356020:CDS 20.0%
!!! ATTTCTAAAGGTATTTTCTT+AGG + tig0015366:48556-48575 None:intergenic 20.0%
!! TTAATAAGGTTGAGAATAAT+TGG - tig0015366:48646-48665 Msa1356020:CDS 20.0%
!! TTACAAGAGAAAAAAAATGT+AGG - tig0015366:48700-48719 Msa1356020:CDS 20.0%
!! AATGAAGAAAAAAATGATGT+TGG - tig0015366:48729-48748 Msa1356020:CDS 20.0%
! ATAACTATTCAGACATAACT+TGG - tig0015366:46623-46642 Msa1356020:CDS 25.0%
! TCTAAATGTTATAAGTCGAA+TGG - tig0015366:46825-46844 Msa1356020:CDS 25.0%
!!! GATGAGTTGTTTTTACTTAA+TGG - tig0015366:46919-46938 Msa1356020:CDS 25.0%
! CTTAATGGAATTCTCAATAT+TGG - tig0015366:46934-46953 Msa1356020:CDS 25.0%
! TAATGGAATTCTCAATATTG+GGG - tig0015366:46936-46955 Msa1356020:CDS 25.0%
! CTTTGAGTAAAAAGTTTGAT+AGG - tig0015366:47016-47035 Msa1356020:CDS 25.0%
!! ATAATTTGTCGAATTCAATG+GGG - tig0015366:47483-47502 Msa1356020:intron 25.0%
!! TTATTCGTCACTGATATTTT+TGG - tig0015366:47530-47549 Msa1356020:intron 25.0%
! AACTTAACTTACTCTTATCT+TGG - tig0015366:47693-47712 Msa1356020:intron 25.0%
!! ATACTTCATTAGCTTAAACT+TGG + tig0015366:47777-47796 None:intergenic 25.0%
! TTGTGTATCTCTTAAATCAA+TGG + tig0015366:47825-47844 None:intergenic 25.0%
!! GCATATACAACTCTAAATTT+TGG - tig0015366:47876-47895 Msa1356020:intron 25.0%
! TTAAATCGTTAAAATGAGTC+AGG + tig0015366:47925-47944 None:intergenic 25.0%
! AGTAATAGGAAAAGATAGAT+GGG - tig0015366:48099-48118 Msa1356020:CDS 25.0%
! TTAGCAATTGCATAAACATA+AGG + tig0015366:48151-48170 None:intergenic 25.0%
! CTATAGTTCTTGTTAATACT+TGG - tig0015366:48266-48285 Msa1356020:CDS 25.0%
!! ATTTGTTGCATGGATTTAAT+TGG - tig0015366:48467-48486 Msa1356020:CDS 25.0%
!! AATACCTTTAGAAATTGTTG+TGG - tig0015366:48561-48580 Msa1356020:CDS 25.0%
! AAAAAATGATGTTGGATTGT+TGG - tig0015366:48737-48756 Msa1356020:CDS 25.0%
! ACAATTATTGCAAGTTAAAC+TGG - tig0015366:48888-48907 Msa1356020:CDS 25.0%
!!! AGTTCTAAGAAATATGTACA+TGG + tig0015366:48961-48980 None:intergenic 25.0%
! GATTTTGTGACTTTCTTTTG+GGG + tig0015366:46255-46274 None:intergenic 30.0%
! CGATTTTGTGACTTTCTTTT+GGG + tig0015366:46256-46275 None:intergenic 30.0%
! TCGATTTTGTGACTTTCTTT+TGG + tig0015366:46257-46276 None:intergenic 30.0%
AATTATTGGAACTTCCTAGT+TGG - tig0015366:46296-46315 Msa1356020:three_prime_UTR 30.0%
ATTATTGGAACTTCCTAGTT+GGG - tig0015366:46297-46316 Msa1356020:three_prime_UTR 30.0%
AGGTTGAGATTTCCAATTAT+AGG + tig0015366:46415-46434 None:intergenic 30.0%
ATTGGAAATCTCAACCTTAT+CGG - tig0015366:46418-46437 Msa1356020:three_prime_UTR 30.0%
! TATTTTCCAGCCGATAATTT+GGG + tig0015366:46595-46614 None:intergenic 30.0%
TTAGACTCAAAGTTGAAAGA+TGG + tig0015366:46810-46829 None:intergenic 30.0%
ACATCTTCTTAAACTCATCA+GGG + tig0015366:46897-46916 None:intergenic 30.0%
AACATCTTCTTAAACTCATC+AGG + tig0015366:46898-46917 None:intergenic 30.0%
TGATGAGTTTAAGAAGATGT+TGG - tig0015366:46897-46916 Msa1356020:CDS 30.0%
! ATATTGGGGATTTTATTCCT+TGG - tig0015366:46950-46969 Msa1356020:CDS 30.0%
AAGTCTAAGAAATGAATCCA+AGG + tig0015366:46970-46989 None:intergenic 30.0%
ATTCATTTCTTAGACTTGCA+AGG - tig0015366:46973-46992 Msa1356020:CDS 30.0%
TAGGTTTATGGAACATGTAT+TGG - tig0015366:47035-47054 Msa1356020:CDS 30.0%
GGATTATGTTGCTAAAGATA+TGG - tig0015366:47089-47108 Msa1356020:CDS 30.0%
TTATGTTGCTAAAGATATGG+TGG - tig0015366:47092-47111 Msa1356020:CDS 30.0%
TCCTAATCTTGAAGTCAAAT+TGG - tig0015366:47140-47159 Msa1356020:CDS 30.0%
! TCCAATTTGACTTCAAGATT+AGG + tig0015366:47144-47163 None:intergenic 30.0%
AAAATATTATCCTTAGGGCA+TGG - tig0015366:47373-47392 Msa1356020:intron 30.0%
AAATATTATCCTTAGGGCAT+GGG - tig0015366:47374-47393 Msa1356020:intron 30.0%
! TAATTTGTCGAATTCAATGG+GGG - tig0015366:47484-47503 Msa1356020:intron 30.0%
! TTGTTATGTATCTTTTCCTC+AGG - tig0015366:47967-47986 Msa1356020:intron 30.0%
GAGTAATAGGAAAAGATAGA+TGG - tig0015366:48098-48117 Msa1356020:CDS 30.0%
ATGGTTATGATATCCCTAAA+GGG - tig0015366:48242-48261 Msa1356020:CDS 30.0%
GGTAAGGATATAGATGTAAA+AGG - tig0015366:48352-48371 Msa1356020:CDS 30.0%
!!! GATTTTGAGTTGTTACCATT+TGG - tig0015366:48379-48398 Msa1356020:CDS 30.0%
TAAGGTGATTCAAACAAGTT+TGG - tig0015366:48441-48460 Msa1356020:CDS 30.0%
ACCTAATAATGTGAAAAAGG+AGG - tig0015366:48495-48514 Msa1356020:CDS 30.0%
!! TCCTCCTTTTTCACATTATT+AGG + tig0015366:48499-48518 None:intergenic 30.0%
GAAAAAGGAGGATTTGAATA+TGG - tig0015366:48507-48526 Msa1356020:CDS 30.0%
! TTGAATATGGAGGAGATTTT+TGG - tig0015366:48520-48539 Msa1356020:CDS 30.0%
! TGAATATGGAGGAGATTTTT+GGG - tig0015366:48521-48540 Msa1356020:CDS 30.0%
GAGTAGAGAAAATACTCAAA+GGG + tig0015366:48614-48633 None:intergenic 30.0%
TGAGTAGAGAAAATACTCAA+AGG + tig0015366:48615-48634 None:intergenic 30.0%
! TTTGAGTATTTTCTCTACTC+AGG - tig0015366:48614-48633 Msa1356020:CDS 30.0%
!!! TCAGGCTTTGTGTTTTAATA+AGG - tig0015366:48632-48651 Msa1356020:CDS 30.0%
! ATGTACATGGTTTAGACTTT+TGG + tig0015366:48948-48967 None:intergenic 30.0%
!!! ACTTTCTTTTGGGGTGAAAT+TGG + tig0015366:46246-46265 None:intergenic 35.0%
GTCACAAAATCGACCAAATA+TGG - tig0015366:46264-46283 Msa1356020:three_prime_UTR 35.0%
GGAAGTTCCAATAATTGTAC+AGG + tig0015366:46292-46311 None:intergenic 35.0%
! CAATTATAGGCCATGGTTTT+GGG + tig0015366:46402-46421 None:intergenic 35.0%
AGATTTCCAATTATAGGCCA+TGG + tig0015366:46409-46428 None:intergenic 35.0%
CCGAAATATAGATGCATGAT+GGG + tig0015366:46490-46509 None:intergenic 35.0%
CCCATCATGCATCTATATTT+CGG - tig0015366:46487-46506 Msa1356020:three_prime_UTR 35.0%
!! GAATGATTTGGCTAGTTCTA+CGG + tig0015366:46539-46558 None:intergenic 35.0%
!!! ATGGGTTTTGAGGAATGATT+TGG + tig0015366:46551-46570 None:intergenic 35.0%
! GTATTTTCCAGCCGATAATT+TGG + tig0015366:46596-46615 None:intergenic 35.0%
GACATAACTTGGTCTCAATA+TGG - tig0015366:46634-46653 Msa1356020:CDS 35.0%
ACTCCAATAGACACATTCTA+CGG + tig0015366:46678-46697 None:intergenic 35.0%
TTATGTACTCATAAGACTCG+AGG + tig0015366:46717-46736 None:intergenic 35.0%
! TTATAAGTCGAATGGTGCTA+GGG - tig0015366:46833-46852 Msa1356020:CDS 35.0%
CATCTTCTTAAACTCATCAG+GGG + tig0015366:46896-46915 None:intergenic 35.0%
GTTTATGGAACATGTATTGG+AGG - tig0015366:47038-47057 Msa1356020:CDS 35.0%
TCAAAGAAGGAAAGATGTGA+AGG - tig0015366:47068-47087 Msa1356020:CDS 35.0%
ATCTTGAAGTCAAATTGGAG+AGG - tig0015366:47145-47164 Msa1356020:CDS 35.0%
!! TTGGCGTGTTCATTTGTTTT+AGG - tig0015366:47233-47252 Msa1356020:intron 35.0%
AATATTATCCTTAGGGCATG+GGG - tig0015366:47375-47394 Msa1356020:intron 35.0%
TACACATATAGTGCACCAAT+TGG + tig0015366:47405-47424 None:intergenic 35.0%
CGACAAATTATATGGATGTG+AGG + tig0015366:47474-47493 None:intergenic 35.0%
TTCAATGGGGGATATAAACA+AGG - tig0015366:47496-47515 Msa1356020:intron 35.0%
! TTTTGGACGTTCAAACAATC+TGG - tig0015366:47547-47566 Msa1356020:intron 35.0%
TTGGAGCTATCAAGCAAAAT+TGG + tig0015366:47625-47644 None:intergenic 35.0%
! ATCAATGGATTCATTGAGCT+AGG + tig0015366:47810-47829 None:intergenic 35.0%
!! TTTGGTCTTGTTAAATGGGT+TGG - tig0015366:47894-47913 Msa1356020:intron 35.0%
ATCGTTAAAATGAGTCAGGT+CGG + tig0015366:47921-47940 None:intergenic 35.0%
GAAGAGCTAGATAGAGTAAT+AGG - tig0015366:48085-48104 Msa1356020:CDS 35.0%
GATGGTTATGATATCCCTAA+AGG - tig0015366:48241-48260 Msa1356020:CDS 35.0%
CAAGAACTATAGTCCCTTTA+GGG + tig0015366:48258-48277 None:intergenic 35.0%
ACAAGAACTATAGTCCCTTT+AGG + tig0015366:48259-48278 None:intergenic 35.0%
CTCTCAGGCATAAATTCATA+TGG + tig0015366:48325-48344 None:intergenic 35.0%
CATATGAATTTATGCCTGAG+AGG - tig0015366:48323-48342 Msa1356020:CDS 35.0%
GAATCACCTTAATACCAAGA+GGG + tig0015366:48432-48451 None:intergenic 35.0%
TGAATCACCTTAATACCAAG+AGG + tig0015366:48433-48452 None:intergenic 35.0%
!! AGTTTGGCTAATTTGTTGCA+TGG - tig0015366:48457-48476 Msa1356020:CDS 35.0%
AAAGGAGGATTTGAATATGG+AGG - tig0015366:48510-48529 Msa1356020:CDS 35.0%
TAAAGATGATCAGCAAGTCT+AGG + tig0015366:48589-48608 None:intergenic 35.0%
CTAGTAGAGAGAGTTAACAA+CGG + tig0015366:48800-48819 None:intergenic 35.0%
!!! TCTTTTGGGGTGAAATTGGA+GGG + tig0015366:46242-46261 None:intergenic 40.0%
!!! TTCTTTTGGGGTGAAATTGG+AGG + tig0015366:46243-46262 None:intergenic 40.0%
AATTGTACAGGCGCCATATT+TGG + tig0015366:46280-46299 None:intergenic 40.0%
TATGGCGCCTGTACAATTAT+TGG - tig0015366:46282-46301 Msa1356020:three_prime_UTR 40.0%
GTGGTAGATTGTATTTGTGG+CGG + tig0015366:46375-46394 None:intergenic 40.0%
CTGGTGGTAGATTGTATTTG+TGG + tig0015366:46378-46397 None:intergenic 40.0%
CACAAATACAATCTACCACC+AGG - tig0015366:46376-46395 Msa1356020:three_prime_UTR 40.0%
! CCAATTATAGGCCATGGTTT+TGG + tig0015366:46403-46422 None:intergenic 40.0%
CCAAAACCATGGCCTATAAT+TGG - tig0015366:46400-46419 Msa1356020:three_prime_UTR 40.0%
!!! CATATTTTTGAGTGAGTCCG+TGG + tig0015366:46465-46484 None:intergenic 40.0%
CACGGACTCACTCAAAAATA+TGG - tig0015366:46463-46482 Msa1356020:three_prime_UTR 40.0%
GCCGAAATATAGATGCATGA+TGG + tig0015366:46491-46510 None:intergenic 40.0%
GGTCTCAATATGGTCCATAT+TGG - tig0015366:46644-46663 Msa1356020:CDS 40.0%
CTCCAATAGACACATTCTAC+GGG + tig0015366:46677-46696 None:intergenic 40.0%
GTTATAAGTCGAATGGTGCT+AGG - tig0015366:46832-46851 Msa1356020:CDS 40.0%
ACTTGCAAGGTTATGTGAAG+AGG - tig0015366:46986-47005 Msa1356020:CDS 40.0%
AGGTTATGTGAAGAGGATGA+AGG - tig0015366:46993-47012 Msa1356020:CDS 40.0%
TGGAGGAACACATTCAAAGA+AGG - tig0015366:47055-47074 Msa1356020:CDS 40.0%
! TGGAGTCAAAGCTTTTACTC+AGG - tig0015366:47170-47189 Msa1356020:CDS 40.0%
!!! GCGTGTTCATTTGTTTTAGG+TGG - tig0015366:47236-47255 Msa1356020:intron 40.0%
ATGATATGCTTGCATCTTCG+TGG - tig0015366:47428-47447 Msa1356020:intron 40.0%
TTTCCTCAGGACTTAATTGC+CGG - tig0015366:47980-47999 Msa1356020:intron 40.0%
! GTTGCTTTCTTGAAGATCTC+TGG + tig0015366:48064-48083 None:intergenic 40.0%
GACAATTGCAAGAGATTCTG+AGG - tig0015366:48288-48307 Msa1356020:CDS 40.0%
!! TTGCAAGAGATTCTGAGGTT+TGG - tig0015366:48293-48312 Msa1356020:CDS 40.0%
!! TGCAAGAGATTCTGAGGTTT+GGG - tig0015366:48294-48313 Msa1356020:CDS 40.0%
TTTATGCCTGAGAGGTTTCT+TGG - tig0015366:48331-48350 Msa1356020:CDS 40.0%
TTAATACCAAGAGGGTAACC+AGG + tig0015366:48424-48443 None:intergenic 40.0%
TGGTTACCCTCTTGGTATTA+AGG - tig0015366:48423-48442 Msa1356020:CDS 40.0%
GGCTCCACAACAATTTCTAA+AGG + tig0015366:48568-48587 None:intergenic 40.0%
GCAAACAATGTGACCCAACT+AGG + tig0015366:46313-46332 None:intergenic 45.0%
GTAGATTGTATTTGTGGCGG+CGG + tig0015366:46372-46391 None:intergenic 45.0%
!!! TTTTTGAGTGAGTCCGTGGA+GGG + tig0015366:46461-46480 None:intergenic 45.0%
!!! ATTTTTGAGTGAGTCCGTGG+AGG + tig0015366:46462-46481 None:intergenic 45.0%
!! TGATTTGGCTAGTTCTACGG+TGG + tig0015366:46536-46555 None:intergenic 45.0%
ATAGACACATTCTACGGGCT+TGG + tig0015366:46672-46691 None:intergenic 45.0%
AGCCCGTAGAATGTGTCTAT+TGG - tig0015366:46672-46691 Msa1356020:CDS 45.0%
!! GGTGCTAGGGAAAAAGTACT+TGG - tig0015366:46846-46865 Msa1356020:CDS 45.0%
GAAGTCAAATTGGAGAGGCA+TGG - tig0015366:47150-47169 Msa1356020:CDS 45.0%
CTCAGCAGTAACAGTCGAAT+GGG - tig0015366:48015-48034 Msa1356020:intron 45.0%
!!! CTCTGGTTTTTTCACCAGCT+CGG + tig0015366:48047-48066 None:intergenic 45.0%
AACAATGAGACTACATCCCG+TGG - tig0015366:48174-48193 Msa1356020:CDS 45.0%
! TGGCACTAAAAATGGTGCCA+CGG + tig0015366:48194-48213 None:intergenic 45.0%
GCTTCTCGTGGCACTAAAAA+TGG + tig0015366:48202-48221 None:intergenic 45.0%
AGAAGCTAGAGAGGATTGCA+AGG - tig0015366:48216-48235 Msa1356020:CDS 45.0%
AGAGAGGATTGCAAGGTTGA+TGG - tig0015366:48223-48242 Msa1356020:CDS 45.0%
TCCTTACCAAGAAACCTCTC+AGG + tig0015366:48340-48359 None:intergenic 45.0%
!! GAGTTGTTACCATTTGGTGC+TGG - tig0015366:48385-48404 Msa1356020:CDS 45.0%
!! TACCATTTGGTGCTGGTAGA+AGG - tig0015366:48392-48411 Msa1356020:CDS 45.0%
ATCCTTCTACCAGCACCAAA+TGG + tig0015366:48397-48416 None:intergenic 45.0%
GGCTCGAAACCTGTCATTGT+GGG - tig0015366:46508-46527 Msa1356020:three_prime_UTR 50.0%
TTCCAGCCGATAATTTGGGC+CGG + tig0015366:46591-46610 None:intergenic 50.0%
ATTATCCTTAGGGCATGGGG+TGG - tig0015366:47378-47397 Msa1356020:intron 50.0%
CTCAGGACTTAATTGCCGGA+GGG - tig0015366:47984-48003 Msa1356020:intron 50.0%
GCTCAGCAGTAACAGTCGAA+TGG - tig0015366:48014-48033 Msa1356020:intron 50.0%
!! GGCACTAAAAATGGTGCCAC+GGG + tig0015366:48193-48212 None:intergenic 50.0%
! CAATCCTCTCTAGCTTCTCG+TGG + tig0015366:48214-48233 None:intergenic 50.0%
GCCTGAGAGGTTTCTTGGTA+AGG - tig0015366:48336-48355 Msa1356020:CDS 50.0%
ATGTGTCCTGGTTACCCTCT+TGG - tig0015366:48415-48434 Msa1356020:CDS 50.0%
GATTGTATTTGTGGCGGCGG+AGG + tig0015366:46369-46388 None:intergenic 55.0%
TACCACCAGGCCCAAAACCA+TGG - tig0015366:46389-46408 Msa1356020:three_prime_UTR 55.0%
!!! ATAGGCCATGGTTTTGGGCC+TGG + tig0015366:46397-46416 None:intergenic 55.0%
AGTCCGTGGAGGGATTGATG+CGG + tig0015366:46451-46470 None:intergenic 55.0%
CGGCTCGAAACCTGTCATTG+TGG - tig0015366:46507-46526 Msa1356020:three_prime_UTR 55.0%
CCTCCGGCAATTAAGTCCTG+AGG + tig0015366:47986-48005 None:intergenic 55.0%
CCTCAGGACTTAATTGCCGG+AGG - tig0015366:47983-48002 Msa1356020:intron 55.0%
GGACTTAATTGCCGGAGGGA+CGG - tig0015366:47988-48007 Msa1356020:intron 55.0%
AGTGCCACGAGAAGCTAGAG+AGG - tig0015366:48207-48226 Msa1356020:CDS 55.0%
GCTGGTAGAAGGATGTGTCC+TGG - tig0015366:48403-48422 Msa1356020:CDS 55.0%
TGTATTTGTGGCGGCGGAGG+CGG + tig0015366:46366-46385 None:intergenic 60.0%
GATGCGGGAGGGATCCGATA+AGG + tig0015366:46435-46454 None:intergenic 60.0%
GTGGAGGGATTGATGCGGGA+GGG + tig0015366:46446-46465 None:intergenic 60.0%
CTCCCGCATCAATCCCTCCA+CGG - tig0015366:46445-46464 Msa1356020:three_prime_UTR 60.0%
GTCCGTGGAGGGATTGATGC+GGG + tig0015366:46450-46469 None:intergenic 60.0%
! GGGTGGCGTCATGGGTTTTG+AGG + tig0015366:46561-46580 None:intergenic 60.0%
TAATTTGGGCCGGCCGGCAA+GGG + tig0015366:46581-46600 None:intergenic 60.0%
ATAATTTGGGCCGGCCGGCA+AGG + tig0015366:46582-46601 None:intergenic 60.0%
TGCCGGCCGGCCCAAATTAT+CGG - tig0015366:46582-46601 Msa1356020:exon 60.0%
AGCCGATAATTTGGGCCGGC+CGG + tig0015366:46587-46606 None:intergenic 60.0%
CTACGGGCTTGGCGCCAATA+TGG + tig0015366:46661-46680 None:intergenic 60.0%
TTGGACCACCCCATGCCCTA+AGG + tig0015366:47386-47405 None:intergenic 60.0%
AGGGCATGGGGTGGTCCAAT+TGG - tig0015366:47387-47406 Msa1356020:intron 60.0%
CGAATGGGCAATCTCCGAGC+TGG - tig0015366:48030-48049 Msa1356020:CDS 60.0%
!!! GGCCATGGTTTTGGGCCTGG+TGG + tig0015366:46394-46413 None:intergenic 65.0%
CGTGGAGGGATTGATGCGGG+AGG + tig0015366:46447-46466 None:intergenic 65.0%
ACGGTGGCGCCCACAATGAC+AGG + tig0015366:46520-46539 None:intergenic 65.0%
ACCCATGACGCCACCCTTGC+CGG - tig0015366:46565-46584 Msa1356020:three_prime_UTR 65.0%
GGCCGGCCCAAATTATCGGC+TGG - tig0015366:46586-46605 Msa1356020:exon 65.0%
TGCTGAGCTCTCCGTCCCTC+CGG + tig0015366:48002-48021 None:intergenic 65.0%
GGCGGCGGCTGAAGAGAAGG+AGG + tig0015366:46348-46367 None:intergenic 70.0%
GGAGGCGGCGGCTGAAGAGA+AGG + tig0015366:46351-46370 None:intergenic 70.0%
ATTTGTGGCGGCGGAGGCGG+CGG + tig0015366:46363-46382 None:intergenic 70.0%
GCCGGCAAGGGTGGCGTCAT+GGG + tig0015366:46569-46588 None:intergenic 70.0%
ATGACGCCACCCTTGCCGGC+CGG - tig0015366:46569-46588 Msa1356020:three_prime_UTR 70.0%
GGCCGGCAAGGGTGGCGTCA+TGG + tig0015366:46570-46589 None:intergenic 75.0%
TTTGGGCCGGCCGGCAAGGG+TGG + tig0015366:46578-46597 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0015366 gene 46226 48984 46226 ID=Msa1356020;Name=Msa1356020
tig0015366 mRNA 46226 48984 46226 ID=Msa1356020-mRNA-1;Parent=Msa1356020;Name=Msa1356020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=57|1|1|1|1|1|2|366|512
tig0015366 exon 46226 47221 46226 ID=Msa1356020-mRNA-1:exon:9692;Parent=Msa1356020-mRNA-1
tig0015366 exon 48019 48984 48019 ID=Msa1356020-mRNA-1:exon:9691;Parent=Msa1356020-mRNA-1
tig0015366 five_prime_UTR 48928 48984 48928 ID=Msa1356020-mRNA-1:five_prime_utr;Parent=Msa1356020-mRNA-1
tig0015366 CDS 48019 48927 48019 ID=Msa1356020-mRNA-1:cds;Parent=Msa1356020-mRNA-1
tig0015366 CDS 46592 47221 46592 ID=Msa1356020-mRNA-1:cds;Parent=Msa1356020-mRNA-1
tig0015366 three_prime_UTR 46226 46591 46226 ID=Msa1356020-mRNA-1:three_prime_utr;Parent=Msa1356020-mRNA-1
Gene Sequence

>Msa1356020

ATGGCGCCTGTACAATTATTGGAACTTCCTAGTTGGGTCACATTGTTTGCAACATTTGTCATCCTCCTTCTCTTCAGCCGCCGCCTCCGCCGCCACAAATACAATCTACCACCAGGCCCAAAACCATGGCCTATAATTGGAAATCTCAACCTTATCGGATCCCTCCCGCATCAATCCCTCCACGGACTCACTCAAAAATATGGACCCATCATGCATCTATATTTCGGCTCGAAACCTGTCATTGTGGGCGCCACCGTAGAACTAGCCAAATCATTCCTCAAAACCCATGACGCCACCCTTGCCGGCCGGCCCAAATTATCGGCTGGAAAATACACAACTTATAACTATTCAGACATAACTTGGTCTCAATATGGTCCATATTGGCGCCAAGCCCGTAGAATGTGTCTATTGGAGTTGTTTAGTGCGAAACGCCTCGAGTCTTATGAGTACATAAGAAAACAAGAGATGCATGACTTTTTGCATAAACTTTTCAATTCAAAAAACAAAACAATTTTGTTGAAAGACCATCTTTCAACTTTGAGTCTAAATGTTATAAGTCGAATGGTGCTAGGGAAAAAGTACTTGGAAAAAACTGAAAATGCAATTATTTCCCCTGATGAGTTTAAGAAGATGTTGGATGAGTTGTTTTTACTTAATGGAATTCTCAATATTGGGGATTTTATTCCTTGGATTCATTTCTTAGACTTGCAAGGTTATGTGAAGAGGATGAAGGCTTTGAGTAAAAAGTTTGATAGGTTTATGGAACATGTATTGGAGGAACACATTCAAAGAAGGAAAGATGTGAAGGATTATGTTGCTAAAGATATGGTGGATGTGCTTTTGCAGCTTGCTGAGAATCCTAATCTTGAAGTCAAATTGGAGAGGCATGGAGTCAAAGCTTTTACTCAGGACTTAATTGCCGGAGGGACGGAGAGCTCAGCAGTAACAGTCGAATGGGCAATCTCCGAGCTGGTGAAAAAACCAGAGATCTTCAAGAAAGCAACAGAAGAGCTAGATAGAGTAATAGGAAAAGATAGATGGGTTGAAGAGAAAGACATTGCGAATTTACCTTATGTTTATGCAATTGCTAAAGAAACAATGAGACTACATCCCGTGGCACCATTTTTAGTGCCACGAGAAGCTAGAGAGGATTGCAAGGTTGATGGTTATGATATCCCTAAAGGGACTATAGTTCTTGTTAATACTTGGACAATTGCAAGAGATTCTGAGGTTTGGGAGAATCCATATGAATTTATGCCTGAGAGGTTTCTTGGTAAGGATATAGATGTAAAAGGACATGATTTTGAGTTGTTACCATTTGGTGCTGGTAGAAGGATGTGTCCTGGTTACCCTCTTGGTATTAAGGTGATTCAAACAAGTTTGGCTAATTTGTTGCATGGATTTAATTGGAGATTACCTAATAATGTGAAAAAGGAGGATTTGAATATGGAGGAGATTTTTGGGCTTTCTACACCTAAGAAAATACCTTTAGAAATTGTTGTGGAGCCTAGACTTGCTGATCATCTTTACTCCCTTTGA
Protein sequence

>Msa1356020

MAPVQLLELPSWVTLFATFVILLLFSRRLRRHKYNLPPGPKPWPIIGNLNLIGSLPHQSLHGLTQKYGPIMHLYFGSKPVIVGATVELAKSFLKTHDATLAGRPKLSAGKYTTYNYSDITWSQYGPYWRQARRMCLLELFSAKRLESYEYIRKQEMHDFLHKLFNSKNKTILLKDHLSTLSLNVISRMVLGKKYLEKTENAIISPDEFKKMLDELFLLNGILNIGDFIPWIHFLDLQGYVKRMKALSKKFDRFMEHVLEEHIQRRKDVKDYVAKDMVDVLLQLAENPNLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELVKKPEIFKKATEELDRVIGKDRWVEEKDIANLPYVYAIAKETMRLHPVAPFLVPREAREDCKVDGYDIPKGTIVLVNTWTIARDSEVWENPYEFMPERFLGKDIDVKGHDFELLPFGAGRRMCPGYPLGIKVIQTSLANLLHGFNWRLPNNVKKEDLNMEEIFGLSTPKKIPLEIVVEPRLADHLYSL*