AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0057890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057890 MtrunA17_Chr1g0156731 99.389 819 4 1 1 819 1 818 0.0 1639
Msa0057890 MtrunA17_Chr6g0469201 49.508 711 317 7 76 781 2 675 0.0 648
Msa0057890 MtrunA17_Chr5g0446951 48.718 702 319 8 79 776 5 669 0.0 619
Msa0057890 MtrunA17_Chr5g0446941 48.718 702 319 8 79 776 5 669 0.0 619
Msa0057890 MtrunA17_Chr1g0202601 47.283 736 316 11 76 800 7 681 0.0 604
Msa0057890 MtrunA17_Chr5g0447581 46.164 743 345 15 78 805 89 791 0.0 598
Msa0057890 MtrunA17_Chr5g0420861 44.912 737 352 15 77 802 80 773 0.0 590
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0057890 AT4G24190.1 83.794 759 118 3 22 779 21 775 0.0 1244
Msa0057890 AT4G24190.2 83.794 759 118 3 22 779 21 775 0.0 1243
Msa0057890 AT5G52640.1 49.041 730 330 8 76 800 2 694 0.0 649
Msa0057890 AT5G56000.1 47.765 716 333 7 76 787 2 680 0.0 627
Msa0057890 AT5G56010.1 47.943 705 326 7 76 776 2 669 0.0 617
Msa0057890 AT5G56030.1 47.943 705 326 7 76 776 2 669 0.0 616
Msa0057890 AT3G07770.1 47.525 707 321 13 78 774 94 760 0.0 610
Msa0057890 AT3G07770.3 47.525 707 321 13 78 774 94 760 0.0 610
Msa0057890 AT3G07770.2 47.525 707 321 13 78 774 94 760 0.0 610
Msa0057890 AT2G04030.1 45.200 750 338 17 76 800 74 775 0.0 602
Msa0057890 AT5G56030.2 46.049 734 326 8 76 776 2 698 0.0 601
Msa0057890 AT2G04030.2 45.067 750 336 17 76 800 74 772 0.0 598

Find 211 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGGATTTGGTAAAGAATT+TGG 0.100722 1_2:+14108124 Msa0057890:CDS
AACACAATGTTTATCAAATT+TGG 0.108599 1_2:-14112000 None:intergenic
CCTTACTGATAAAGACATTT+TGG 0.114774 1_2:+14107656 Msa0057890:CDS
CTCAATCTAATTGGGCAATT+TGG 0.152816 1_2:+14108296 Msa0057890:CDS
GACCCTCCTTGGACACATTT+TGG 0.171757 1_2:-14110971 None:intergenic
ATTACTACTGTCCTCAATTT+TGG 0.191693 1_2:+14112110 Msa0057890:three_prime_UTR
TTAACTTCCCTATCTATATC+TGG 0.204471 1_2:+14109262 Msa0057890:CDS
GCAACGTGGCGTTGATTAAT+TGG 0.209213 1_2:-14106383 None:intergenic
AGCTGAAGTTTCAAGGCTTA+TGG 0.218402 1_2:+14107131 Msa0057890:CDS
AGTGGTGATCTCAATCTAAT+TGG 0.239122 1_2:+14108287 Msa0057890:CDS
TTCATCTTCACTTTCCTCCT+TGG 0.262279 1_2:-14109491 None:intergenic
ATATACTCTCTCTTTGTTAC+TGG 0.262725 1_2:-14106486 None:intergenic
TCATCTTCACTTTCCTCCTT+GGG 0.274450 1_2:-14109490 None:intergenic
TGTCGGTTGCAGTTATTTCT+TGG 0.277555 1_2:+14111694 Msa0057890:three_prime_UTR
TCTTCCTCTGTAACCTCCTT+TGG 0.284101 1_2:-14109625 None:intergenic
GAGGATTTGGTAAAGAATTT+GGG 0.292920 1_2:+14108125 Msa0057890:CDS
CAATTCACTTTACAGTAATA+AGG 0.298653 1_2:+14107164 Msa0057890:CDS
ACCAAGTTCTGGAATGAGTT+TGG 0.314376 1_2:+14110448 Msa0057890:CDS
TTGCTTCCCCAGATATAGAT+AGG 0.331375 1_2:-14109270 None:intergenic
CGCAATACGAAAAGCAATAT+TGG 0.335037 1_2:+14112074 Msa0057890:three_prime_UTR
TGCATCAAGTATTCATCAAC+TGG 0.336633 1_2:-14110918 None:intergenic
ACGGATGGGTCCTTTAACTT+AGG 0.348209 1_2:-14111767 None:intergenic
CCACTTAGTTAGATCCTTGA+AGG 0.361563 1_2:-14111036 None:intergenic
TTCCTTGCTGGGACGAAGAA+TGG 0.362934 1_2:-14106459 None:intergenic
TGGTATGACAAAGGAGGATT+TGG 0.366719 1_2:+14108112 Msa0057890:CDS
ATCTGACTTTCAGGTATGTA+TGG 0.368320 1_2:+14108481 Msa0057890:intron
CCCGAGTTTCAGACCCTCCT+TGG 0.369926 1_2:-14110982 None:intergenic
CTCGTCTAACATACAACTTC+AGG 0.373088 1_2:-14109923 None:intergenic
GTAGTGGTGACATCAAAATT+TGG 0.373244 1_2:+14111131 Msa0057890:CDS
TCCCGGAGTTCCTTGATGAT+AGG 0.374294 1_2:-14111260 None:intergenic
CTTCTTCTTCTCGCAGATCA+AGG 0.377003 1_2:+14106644 Msa0057890:CDS
GGTTCTTAACTACTCTTTCC+CGG 0.380304 1_2:-14111277 None:intergenic
GAGGTCAATACACCAAGTTC+TGG 0.382290 1_2:+14110437 Msa0057890:CDS
TCTTTGTCAGTGGACTCGTC+AGG 0.385604 1_2:-14110233 None:intergenic
TAAATGATGTGAAGGCTATA+TGG 0.388507 1_2:+14109593 Msa0057890:CDS
TCCAAACTCATTCCAGAACT+TGG 0.392555 1_2:-14110449 None:intergenic
TACAAGTCCTGAGGTGCTTT+AGG 0.402740 1_2:-14109870 None:intergenic
GAAGGTTCTAAGAGAACGTT+TGG 0.404533 1_2:-14106547 None:intergenic
AGTTTCAAGCTGAAGTTTCA+AGG 0.404580 1_2:+14107124 Msa0057890:CDS
TTGGGTACCATAGCAAAATC+TGG 0.405084 1_2:+14108143 Msa0057890:CDS
TGTAGGCACTGGACAAGATT+AGG 0.406249 1_2:+14107625 Msa0057890:intron
GGTCCTCTTCGGCAAGCTTA+CGG 0.422206 1_2:-14110211 None:intergenic
ACTCGCTGGCCTCTTCTTTG+AGG 0.426467 1_2:-14108587 None:intergenic
CCAAAATGTCTTTATCAGTA+AGG 0.426746 1_2:-14107656 None:intergenic
GTAAAGTGGCTCCATGATAA+AGG 0.427105 1_2:-14109804 None:intergenic
CCCGGAGTTCCTTGATGATA+GGG 0.430409 1_2:-14111259 None:intergenic
GTGCTTTAGGTGGCACATAA+AGG 0.430754 1_2:-14109857 None:intergenic
TGGAACCAGCAAAGAACAAC+TGG 0.432951 1_2:+14110726 Msa0057890:CDS
GCGATGACAAACCTTTATCA+TGG 0.434104 1_2:+14109793 Msa0057890:CDS
TCCTTGCTGGGACGAAGAAT+GGG 0.443401 1_2:-14106458 None:intergenic
TCCTCCTCAACTGTTGCATC+AGG 0.444473 1_2:-14111531 None:intergenic
TCTTATCTTCATAATCCATC+AGG 0.444687 1_2:-14110944 None:intergenic
TCTATTAGAGACAGAGGTAT+TGG 0.445475 1_2:+14108092 Msa0057890:CDS
ATAGCAAAATCTGGAACTTC+AGG 0.446829 1_2:+14108152 Msa0057890:CDS
CAACGCCAAGCTTGAAATCC+AGG 0.454983 1_2:+14107689 Msa0057890:CDS
TAAATGTTGGTTACCATTGG+AGG 0.459116 1_2:-14111962 None:intergenic
TAACTTCCCTATCTATATCT+GGG 0.461417 1_2:+14109263 Msa0057890:CDS
ATTTCTCGTGATACATTCAA+TGG 0.461649 1_2:-14110122 None:intergenic
CCAAGGAGGGTCTGAAACTC+GGG 0.464941 1_2:+14110982 Msa0057890:CDS
TTCTAAAGACAAGGAACTAA+AGG 0.470485 1_2:+14111010 Msa0057890:CDS
ACAAACCTGGATTTCAAGCT+TGG 0.470570 1_2:-14107694 None:intergenic
TTTGGAAAATCTATTAAACT+TGG 0.471577 1_2:+14110466 Msa0057890:CDS
AAAACTGATCATTTATAAAG+TGG 0.473699 1_2:-14111898 None:intergenic
TACCTCTGTCTCTAATAGAT+AGG 0.475363 1_2:-14108088 None:intergenic
GAGAGAAGAAGAAGAGTGGA+AGG 0.480182 1_2:-14106614 None:intergenic
TCCAAGGAGGGTCTGAAACT+CGG 0.480470 1_2:+14110981 Msa0057890:CDS
CTAATTGGGCAATTTGGAGT+TGG 0.481464 1_2:+14108302 Msa0057890:CDS
AATTCTAGAAGCAAAATCCT+TGG 0.482964 1_2:-14111475 None:intergenic
GGAACTAAAGGAATCCTTCA+AGG 0.484459 1_2:+14111022 Msa0057890:CDS
GAGAAATTCTGCCAAAATTG+AGG 0.486767 1_2:-14112121 None:intergenic
CCTCTTGACAACATCTGAAT+CGG 0.488306 1_2:-14106955 None:intergenic
TTGCAATTTCAGAAGATACA+TGG 0.492822 1_2:+14108526 Msa0057890:CDS
CATCTTCACTTTCCTCCTTG+GGG 0.498254 1_2:-14109489 None:intergenic
CAAGCTTACGGATCATATCA+AGG 0.500174 1_2:-14110199 None:intergenic
GTGGTGATCTCAATCTAATT+GGG 0.500326 1_2:+14108288 Msa0057890:CDS
CTTCAAGAAATTGTTTAGTG+TGG 0.500579 1_2:+14112184 Msa0057890:three_prime_UTR
CTTTGTCAGTGGACTCGTCA+GGG 0.500986 1_2:-14110232 None:intergenic
TTCTTCAGACGCTCAAGGAA+TGG 0.506178 1_2:-14110757 None:intergenic
AAGAGAGAGAAGAAGAAGAG+TGG 0.506230 1_2:-14106618 None:intergenic
CACAAGGAGTGTTATCCAAT+CGG 0.507998 1_2:-14111109 None:intergenic
ATTCTAGAAGCAAAATCCTT+GGG 0.509254 1_2:-14111474 None:intergenic
CGACGAGTCTTCTGAGGAAG+AGG 0.516292 1_2:+14109326 Msa0057890:CDS
TGGTGGATCTACTACTTCAT+CGG 0.517594 1_2:-14106889 None:intergenic
TCATCAGCTTCGTTTGAAGC+AGG 0.518350 1_2:-14111600 None:intergenic
GACTCGTCGTCTTCATCAGC+GGG 0.518353 1_2:-14109312 None:intergenic
CTGTCATTGCAATGAGGAAG+TGG 0.518703 1_2:+14106585 Msa0057890:exon
ATTTGGTTGGAGTGCAAACA+TGG 0.519357 1_2:+14111148 Msa0057890:CDS
CACTTTCGAAAAGTGCAGTC+TGG 0.519596 1_2:-14111434 None:intergenic
GGACGAAGAATGGGAGCGGT+TGG 0.520764 1_2:-14106449 None:intergenic
TGATAAACGATTTCTGTTGG+TGG 0.522059 1_2:-14110503 None:intergenic
CATCGACATTGTCATTTGCA+AGG 0.523230 1_2:-14111070 None:intergenic
TACATATCTAGAATGAAAGC+TGG 0.527032 1_2:+14110679 Msa0057890:CDS
CAAAATGTCTTTATCAGTAA+GGG 0.527688 1_2:-14107655 None:intergenic
CCCTATCATCAAGGAACTCC+GGG 0.530085 1_2:+14111259 Msa0057890:CDS
GGAAGATGAGACTGAAGTTG+AGG 0.531983 1_2:+14111551 Msa0057890:CDS
TGTGCCACCTAAAGCACCTC+AGG 0.535240 1_2:+14109863 Msa0057890:CDS
TAAGGCAAAATTCCAACGGA+TGG 0.535919 1_2:-14111782 None:intergenic
GATGCAGATTAAGTTAGATA+AGG 0.535990 1_2:+14108055 Msa0057890:intron
TGTCTTTATCAGTAAGGGAT+AGG 0.536994 1_2:-14107650 None:intergenic
CATCACCTTCAGCAGTAAAG+TGG 0.538199 1_2:-14109818 None:intergenic
GTATGGGAATCTAAAGCTGA+TGG 0.541849 1_2:+14108498 Msa0057890:CDS
ACCCTATCATCAAGGAACTC+CGG 0.542750 1_2:+14111258 Msa0057890:CDS
TATTAAACTTGGTATCATTG+AGG 0.544026 1_2:+14110477 Msa0057890:CDS
ATACTCTTCCACGTACTCGC+TGG 0.546272 1_2:-14108601 None:intergenic
GGATGAGAGTGTGAAGCAAA+CGG 0.547097 1_2:+14111398 Msa0057890:intron
AAGCATACATGCGCGGCAAG+AGG 0.548258 1_2:+14111213 Msa0057890:CDS
AAACTCGGTGCTGTTCCTCA+TGG 0.549531 1_2:+14106924 Msa0057890:CDS
TGGTGACATCAAAATTTGGT+TGG 0.549849 1_2:+14111135 Msa0057890:CDS
GGACTCGTCAGGGTCCTCTT+CGG 0.550477 1_2:-14110222 None:intergenic
ATCGACATTGTCATTTGCAA+GGG 0.551505 1_2:-14111069 None:intergenic
AGAAGAGGCCAGCGAGTACG+TGG 0.552899 1_2:+14108593 Msa0057890:CDS
AGCGGTTGGATTTGCCAGCA+TGG 0.553288 1_2:-14106435 None:intergenic
GATCCGTAAGCTTGCCGAAG+AGG 0.555543 1_2:+14110208 Msa0057890:CDS
AAACTGATCATTTATAAAGT+GGG 0.556014 1_2:-14111897 None:intergenic
TGCTTCCCCAGATATAGATA+GGG 0.556945 1_2:-14109269 None:intergenic
AGCATACATGCGCGGCAAGA+GGG 0.557652 1_2:+14111214 Msa0057890:CDS
TTTCTTGTTGAATGATCCCA+AGG 0.558398 1_2:+14111458 Msa0057890:CDS
TGTGAAGATATCCAACCGAT+TGG 0.558827 1_2:+14111094 Msa0057890:CDS
AGGAGTGTTATCCAATCGGT+TGG 0.561154 1_2:-14111105 None:intergenic
TGTGTGTGAATGAAGGGAAT+CGG 0.561471 1_2:+14107056 Msa0057890:intron
TAGAATGAAAGCTGGACAGA+AGG 0.562025 1_2:+14110687 Msa0057890:CDS
CACCGTCAGATCATCCATGC+TGG 0.562122 1_2:+14106421 Msa0057890:five_prime_UTR
GAAGTTCCAAAATGTGTCCA+AGG 0.562529 1_2:+14110965 Msa0057890:CDS
TCCACTGACAAAGAAAAGAA+AGG 0.563357 1_2:+14110242 Msa0057890:CDS
TGGAGCCACTTTACTGCTGA+AGG 0.565774 1_2:+14109813 Msa0057890:CDS
TAAAATACACCTCAAAGAAG+AGG 0.565903 1_2:+14108578 Msa0057890:CDS
TGTCAATTTACCCTCAGACT+TGG 0.566708 1_2:-14110644 None:intergenic
TCCTTGATGATAGGGTGTCT+AGG 0.566886 1_2:-14111251 None:intergenic
CAATTTCTTGAAGTCTTATG+CGG 0.568276 1_2:-14112174 None:intergenic
AAGTTAAAGGACCCATCCGT+TGG 0.569335 1_2:+14111770 Msa0057890:three_prime_UTR
CGGGAAGGATTCTAAAGACA+AGG 0.569516 1_2:+14111001 Msa0057890:CDS
TATTTACAGCACCAAGTCTG+AGG 0.569728 1_2:+14110633 Msa0057890:intron
CTGATCATTTATAAAGTGGG+TGG 0.571724 1_2:-14111894 None:intergenic
TTGATCTAGTTGCTTCGACG+TGG 0.572298 1_2:-14106359 None:intergenic
TCCTAGACACCCTATCATCA+AGG 0.573259 1_2:+14111250 Msa0057890:CDS
TCTAACATACAACTTCAGGT+TGG 0.576509 1_2:-14109919 None:intergenic
ACTTCTCCGCATTACTGCGA+AGG 0.578324 1_2:-14107098 None:intergenic
ATCTCTGTTCCACGTCCTAG+TGG 0.579957 1_2:-14108555 None:intergenic
AATTTCTTGAAGTCTTATGC+GGG 0.581132 1_2:-14112173 None:intergenic
AAGTGTCACTATGTAATGGA+TGG 0.581282 1_2:-14106320 None:intergenic
TGCTTCAAACGAAGCTGATG+AGG 0.581857 1_2:+14111602 Msa0057890:CDS
TAAGACTAATGACTGTGCTA+AGG 0.581922 1_2:-14111800 None:intergenic
AGTAGTAGATCCACCAAAGG+TGG 0.582933 1_2:+14106896 Msa0057890:CDS
GGAACTCTTAAATGATGTGA+AGG 0.585981 1_2:+14109585 Msa0057890:CDS
TCCTGATGCAACAGTTGAGG+AGG 0.586304 1_2:+14111530 Msa0057890:CDS
AGTTAAGTGTCACTATGTAA+TGG 0.586627 1_2:-14106324 None:intergenic
CAGTCCTGATGCAACAGTTG+AGG 0.589745 1_2:+14111527 Msa0057890:CDS
TCTGACTTTCAGGTATGTAT+GGG 0.590095 1_2:+14108482 Msa0057890:intron
GATGATCTGACGGTGAAGGA+TGG 0.591626 1_2:-14106413 None:intergenic
TCAAGGATCTAACTAAGTGG+TGG 0.593513 1_2:+14111039 Msa0057890:CDS
AAGGCAAAATTCCAACGGAT+GGG 0.594736 1_2:-14111781 None:intergenic
CTTCTCCGCATTACTGCGAA+GGG 0.594891 1_2:-14107097 None:intergenic
ATTCTACCACTCTCTTGCCA+AGG 0.602333 1_2:+14109657 Msa0057890:CDS
TTCCAAAATGTGTCCAAGGA+GGG 0.604051 1_2:+14110969 Msa0057890:CDS
CAGAGGTATTGGTATGACAA+AGG 0.604095 1_2:+14108103 Msa0057890:CDS
AAATTTCAAGCGAATGCGGA+AGG 0.606036 1_2:+14106861 Msa0057890:CDS
AGACTCGTCGTCTTCATCAG+CGG 0.606434 1_2:-14109313 None:intergenic
TTTGATGTCACCACTACACA+AGG 0.606525 1_2:-14111125 None:intergenic
GGGAAGCAAAGAGGTTGATG+TGG 0.608554 1_2:+14109284 Msa0057890:CDS
TGAAGACGACGAGTCTTCTG+AGG 0.608975 1_2:+14109320 Msa0057890:CDS
AAGCAAAGAGGTTGATGTGG+AGG 0.610301 1_2:+14109287 Msa0057890:CDS
ATACTTGATGCAATACCTGA+TGG 0.612459 1_2:+14110929 Msa0057890:CDS
GCCTAAAACAAAGACAGTGA+AGG 0.613840 1_2:+14109546 Msa0057890:CDS
TCCCATTCTTCGTCCCAGCA+AGG 0.614137 1_2:+14106457 Msa0057890:five_prime_UTR
CCTTCAAGGATCTAACTAAG+TGG 0.614149 1_2:+14111036 Msa0057890:CDS
ATTTACAGCACCAAGTCTGA+GGG 0.614924 1_2:+14110634 Msa0057890:intron
CAGTGTAAACAATTTCGAGA+AGG 0.616346 1_2:-14106565 None:intergenic
GAATCCAAAGGAGGTTACAG+AGG 0.616769 1_2:+14109621 Msa0057890:CDS
GAGATCCCTTCGCAGTAATG+CGG 0.618086 1_2:+14107092 Msa0057890:CDS
AACTTCCCTATCTATATCTG+GGG 0.620396 1_2:+14109264 Msa0057890:CDS
ATCCTATCTATTAGAGACAG+AGG 0.620781 1_2:+14108086 Msa0057890:CDS
CCGATTCAGATGTTGTCAAG+AGG 0.623522 1_2:+14106955 Msa0057890:CDS
GAAATTCTGAGTCGTCCATG+TGG 0.626749 1_2:+14106295 Msa0057890:five_prime_UTR
AAGCTTACGGATCATATCAA+GGG 0.627367 1_2:-14110198 None:intergenic
TGGAATGAACCACTAGGACG+TGG 0.627795 1_2:+14108546 Msa0057890:CDS
GCTGGGACGAAGAATGGGAG+CGG 0.628382 1_2:-14106453 None:intergenic
TCTCTTCTCATCAACATCAG+AGG 0.630151 1_2:-14110416 None:intergenic
CATGGATGATCTGACGGTGA+AGG 0.630554 1_2:-14106417 None:intergenic
ATGTAATGGATGGACCCACA+TGG 0.632498 1_2:-14106310 None:intergenic
CTATATCTGGGGAAGCAAAG+AGG 0.633804 1_2:+14109275 Msa0057890:CDS
ATGTGAAGGCTATATGGCTG+AGG 0.634531 1_2:+14109599 Msa0057890:CDS
TGCCAGCATGGATGATCTGA+CGG 0.635605 1_2:-14106423 None:intergenic
GTTGAGAAAATGCAGACAAG+TGG 0.638859 1_2:+14108269 Msa0057890:CDS
TTTACACTGTCATTGCAATG+AGG 0.639349 1_2:+14106579 Msa0057890:exon
ATGATCTGACGGTGAAGGAT+GGG 0.640650 1_2:-14106412 None:intergenic
AAGTCCTGAGGTGCTTTAGG+TGG 0.640658 1_2:-14109867 None:intergenic
TCAATCAGCTGAAAGCCCCA+AGG 0.640725 1_2:+14109474 Msa0057890:intron
TCTGATGTTGATGAGAAGAG+AGG 0.646244 1_2:+14110418 Msa0057890:CDS
ATATTACCTTGGCAAGAGAG+TGG 0.647445 1_2:-14109663 None:intergenic
GTGCTAAGGCAAAATTCCAA+CGG 0.652675 1_2:-14111786 None:intergenic
AAATTCTGAGTCGTCCATGT+GGG 0.655828 1_2:+14106296 Msa0057890:five_prime_UTR
GCATCAAGTATTCATCAACT+GGG 0.657313 1_2:-14110917 None:intergenic
TGAAGGAAACGACTTACGAG+TGG 0.661856 1_2:+14109563 Msa0057890:CDS
AAATGACGATGGTGATGTCA+AGG 0.662375 1_2:+14111626 Msa0057890:CDS
GTTCCAAAATGTGTCCAAGG+AGG 0.663752 1_2:+14110968 Msa0057890:CDS
GAAGGAAACGACTTACGAGT+GGG 0.669364 1_2:+14109564 Msa0057890:CDS
AGGTATTGGTATGACAAAGG+AGG 0.676241 1_2:+14108106 Msa0057890:CDS
GGATAACACTCCTTGTGTAG+TGG 0.678484 1_2:+14111115 Msa0057890:CDS
GCAAAGTGTCAGAATCAACA+AGG 0.678755 1_2:-14110100 None:intergenic
GGAGGGTCTGAAACTCGGGA+AGG 0.685274 1_2:+14110986 Msa0057890:CDS
GATACATGGAATGAACCACT+AGG 0.687380 1_2:+14108540 Msa0057890:CDS
TAACTCTCGTACAAGTCCTG+AGG 0.691370 1_2:-14109879 None:intergenic
TGAAGTAGTAGATCCACCAA+AGG 0.692806 1_2:+14106893 Msa0057890:CDS
ATCAGCTGAAAGCCCCAAGG+AGG 0.696234 1_2:+14109477 Msa0057890:intron
ATGGCTGAGGAATCCAAAGG+AGG 0.701467 1_2:+14109612 Msa0057890:CDS
GAATCGGTTGAAAGTCCATG+AGG 0.719230 1_2:-14106939 None:intergenic
TATATGGCTGAGGAATCCAA+AGG 0.735087 1_2:+14109609 Msa0057890:CDS
GCTGATGAGGTAAATGACGA+TGG 0.743848 1_2:+14111615 Msa0057890:CDS
CATTTGAAATCAGTTCCCTG+AGG 0.745225 1_2:-14107194 None:intergenic
AAGAGTAGTTAAGAACCCTG+AGG 0.776155 1_2:+14111283 Msa0057890:CDS
AGGATGGGTTAAGTGCAACG+TGG 0.803327 1_2:-14106397 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTGTTTATCTAAAAA+AGG + chr1_2:14108012-14108031 Msa0057890:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+AGG + chr1_2:14111918-14111937 Msa0057890:three_prime_UTR 10.0%
!!! TAAATGAAAATTTGTTTGTT+AGG + chr1_2:14106834-14106853 Msa0057890:intron 15.0%
!! TATAATAAAAGTGATAGTTT+GGG - chr1_2:14108642-14108661 None:intergenic 15.0%
!! TTATAATAAAAGTGATAGTT+TGG - chr1_2:14108643-14108662 None:intergenic 15.0%
!! TTATCTATTCAATATACAAT+TGG + chr1_2:14109170-14109189 Msa0057890:intron 15.0%
!! ATACAAGTATGTATAATTTA+AGG + chr1_2:14109349-14109368 Msa0057890:intron 15.0%
!! CAATAAAAAAGAAACTTATT+AGG + chr1_2:14110171-14110190 Msa0057890:CDS 15.0%
!!! ACTATTTTTGACAAAAATTA+AGG - chr1_2:14111862-14111881 None:intergenic 15.0%
!! TGAATAGGTAAAATTGATTA+TGG + chr1_2:14107320-14107339 Msa0057890:intron 20.0%
!! ATGTACAAATTATAAATGCA+AGG - chr1_2:14107567-14107586 None:intergenic 20.0%
!! ACAAATAAGTTCTATATTGT+AGG + chr1_2:14107608-14107627 Msa0057890:intron 20.0%
!! ATAATTAAAGTATACAAACC+TGG - chr1_2:14107710-14107729 None:intergenic 20.0%
!!! TGTTTTAATGCTGTTTTAAT+GGG + chr1_2:14107810-14107829 Msa0057890:intron 20.0%
!!! TGTTTTAATGGGTTTATTTT+TGG + chr1_2:14107821-14107840 Msa0057890:intron 20.0%
!!! CTTAACTTGTAAAACTATTT+GGG + chr1_2:14107871-14107890 Msa0057890:intron 20.0%
!! ATAATAAAAGTGATAGTTTG+GGG - chr1_2:14108641-14108660 None:intergenic 20.0%
!! AAGGTTATAAATCAAATTTG+TGG + chr1_2:14108842-14108861 Msa0057890:intron 20.0%
!! TATCGTATACAATAATAAGT+AGG + chr1_2:14108967-14108986 Msa0057890:intron 20.0%
!! ATCGTATACAATAATAAGTA+GGG + chr1_2:14108968-14108987 Msa0057890:intron 20.0%
!! GGTTAAATTAAATTATCACA+GGG + chr1_2:14109039-14109058 Msa0057890:intron 20.0%
!!! TTGATGATACTTATAATGTT+GGG + chr1_2:14109747-14109766 Msa0057890:intron 20.0%
!!! TCTTAAACAAATGTTCTTTT+TGG + chr1_2:14110063-14110082 Msa0057890:intron 20.0%
!! TTTGGAAAATCTATTAAACT+TGG + chr1_2:14110466-14110485 Msa0057890:CDS 20.0%
!! GTCAAAATAAATACAATTTC+TGG - chr1_2:14110839-14110858 None:intergenic 20.0%
!!! TTTTTTTCAATATATGCTAC+AGG + chr1_2:14110878-14110897 Msa0057890:intron 20.0%
!! ATGTTGAAGACATAAAATAA+GGG - chr1_2:14111339-14111358 None:intergenic 20.0%
!! TATGTTGAAGACATAAAATA+AGG - chr1_2:14111340-14111359 None:intergenic 20.0%
!! AAACTGATCATTTATAAAGT+GGG - chr1_2:14111900-14111919 None:intergenic 20.0%
!! AAAACTGATCATTTATAAAG+TGG - chr1_2:14111901-14111920 None:intergenic 20.0%
!! AACACAATGTTTATCAAATT+TGG - chr1_2:14112003-14112022 None:intergenic 20.0%
! CAATTCACTTTACAGTAATA+AGG + chr1_2:14107164-14107183 Msa0057890:CDS 25.0%
!! TAATAAGGATATTTTCCTCA+GGG + chr1_2:14107179-14107198 Msa0057890:CDS 25.0%
!!! CAAGTTAGAATTGATTTTGA+CGG + chr1_2:14107431-14107450 Msa0057890:intron 25.0%
!! AATTGATTTACATGTATGGT+TGG - chr1_2:14107482-14107501 None:intergenic 25.0%
!! GTAGAATTGATTTACATGTA+TGG - chr1_2:14107486-14107505 None:intergenic 25.0%
!!! TACGCTTTTAGAATCAATTT+TGG + chr1_2:14107503-14107522 Msa0057890:intron 25.0%
!! GGATTTTCAAAGTATATGTT+TGG - chr1_2:14107546-14107565 None:intergenic 25.0%
! CAAAATGTCTTTATCAGTAA+GGG - chr1_2:14107658-14107677 None:intergenic 25.0%
!! CTTACTGATAAAGACATTTT+GGG + chr1_2:14107657-14107676 Msa0057890:CDS 25.0%
!!! CTGTAGGTTTTTTAATGATA+AGG + chr1_2:14107772-14107791 Msa0057890:intron 25.0%
! ATTAAAACACCATCATTCTT+TGG - chr1_2:14107799-14107818 None:intergenic 25.0%
!!! GTGTTTTAATGCTGTTTTAA+TGG + chr1_2:14107809-14107828 Msa0057890:intron 25.0%
! GCTTATATGAACTTATCTAT+TGG + chr1_2:14107848-14107867 Msa0057890:intron 25.0%
!!! GCTTAACTTGTAAAACTATT+TGG + chr1_2:14107870-14107889 Msa0057890:intron 25.0%
!! TTCAGGTATGTATATAGTTT+TGG + chr1_2:14108169-14108188 Msa0057890:intron 25.0%
!! TCAGGTATGTATATAGTTTT+GGG + chr1_2:14108170-14108189 Msa0057890:intron 25.0%
! AGATCATTTCCAAAATCAAT+AGG - chr1_2:14108465-14108484 None:intergenic 25.0%
!!! TGATTTTAAAATCAAGCAAC+TGG - chr1_2:14108666-14108685 None:intergenic 25.0%
!!! TTCTTTATTTTTCACTGCAT+GGG + chr1_2:14108718-14108737 Msa0057890:intron 25.0%
! TTGTTCATGCTTAAGAATAT+AGG + chr1_2:14108811-14108830 Msa0057890:intron 25.0%
! TCGTATACAATAATAAGTAG+GGG + chr1_2:14108969-14108988 Msa0057890:intron 25.0%
! GGGTTAAATTAAATTATCAC+AGG + chr1_2:14109038-14109057 Msa0057890:intron 25.0%
!!! TAATAACTTCTGTTTTTCAC+AGG + chr1_2:14109212-14109231 Msa0057890:intron 25.0%
! GTATAATTTAAGGATTCAGT+TGG + chr1_2:14109359-14109378 Msa0057890:intron 25.0%
! ATATCTTTATATGTTCCGTT+GGG - chr1_2:14109711-14109730 None:intergenic 25.0%
!! CTTGATGATACTTATAATGT+TGG + chr1_2:14109746-14109765 Msa0057890:intron 25.0%
! TGATGATACTTATAATGTTG+GGG + chr1_2:14109748-14109767 Msa0057890:intron 25.0%
!! CAAGAATCCTAATTCTTTTA+TGG + chr1_2:14110295-14110314 Msa0057890:intron 25.0%
! TGAGAAACCATAAAAGAATT+AGG - chr1_2:14110305-14110324 None:intergenic 25.0%
! TCTGCATCAAAAGTTAAAAT+TGG - chr1_2:14110388-14110407 None:intergenic 25.0%
! TATTAAACTTGGTATCATTG+AGG + chr1_2:14110477-14110496 Msa0057890:CDS 25.0%
!! TTTTGATAAACGATTTCTGT+TGG - chr1_2:14110509-14110528 None:intergenic 25.0%
! CCTATAAGAGTTAAATAACA+AGG - chr1_2:14110562-14110581 None:intergenic 25.0%
!!! CCTTGTTATTTAACTCTTAT+AGG + chr1_2:14110559-14110578 Msa0057890:intron 25.0%
! ACATTGTTAACTGATGAAAT+GGG - chr1_2:14110596-14110615 None:intergenic 25.0%
! TACATTGTTAACTGATGAAA+TGG - chr1_2:14110597-14110616 None:intergenic 25.0%
!! AAGGATATCTTTTACATAAC+TGG + chr1_2:14110706-14110725 Msa0057890:CDS 25.0%
!! TTTTATGTCTTCAACATAGT+TGG + chr1_2:14111342-14111361 Msa0057890:intron 25.0%
! TTTATGTCTTCAACATAGTT+GGG + chr1_2:14111343-14111362 Msa0057890:intron 25.0%
!!! GTTTTAGTTTCCTAAGTTAA+AGG + chr1_2:14111757-14111776 Msa0057890:three_prime_UTR 25.0%
!!! TTTTAAATGTTGGTTACCAT+TGG - chr1_2:14111968-14111987 None:intergenic 25.0%
!! TTGCAATGCATTTTAAATGT+TGG - chr1_2:14111978-14111997 None:intergenic 25.0%
!! ATGATAGATGTTTTATAGCT+GGG - chr1_2:14112032-14112051 None:intergenic 25.0%
! AGTTAAGTGTCACTATGTAA+TGG - chr1_2:14106327-14106346 None:intergenic 30.0%
ATATACTCTCTCTTTGTTAC+TGG - chr1_2:14106489-14106508 None:intergenic 30.0%
TTACGCACATTTCATTTCAA+TGG + chr1_2:14106797-14106816 Msa0057890:intron 30.0%
TCAAAAATTTCAAGCGAATG+CGG + chr1_2:14106857-14106876 Msa0057890:CDS 30.0%
ATTGAAATGTGTGTGAATGA+AGG + chr1_2:14107049-14107068 Msa0057890:intron 30.0%
TTGAAATGTGTGTGAATGAA+GGG + chr1_2:14107050-14107069 Msa0057890:intron 30.0%
! GTAATAAGGATATTTTCCTC+AGG + chr1_2:14107178-14107197 Msa0057890:CDS 30.0%
!!! GTACGTTTTGAGTTTTGAAT+CGG + chr1_2:14107268-14107287 Msa0057890:intron 30.0%
GAAGTTAGAATGTAAAGCTT+TGG - chr1_2:14107412-14107431 None:intergenic 30.0%
CCAAAATGTCTTTATCAGTA+AGG - chr1_2:14107659-14107678 None:intergenic 30.0%
! CCTTACTGATAAAGACATTT+TGG + chr1_2:14107656-14107675 Msa0057890:CDS 30.0%
!! GTTAATTAGTTTGTCTCTGT+AGG + chr1_2:14107756-14107775 Msa0057890:intron 30.0%
!!! TAATGGGTTTATTTTTGGAC+TGG + chr1_2:14107826-14107845 Msa0057890:intron 30.0%
ACAAGCTGAAAACATATAAG+CGG - chr1_2:14107911-14107930 None:intergenic 30.0%
AAGCTAACATGGAAAACTTA+TGG - chr1_2:14107936-14107955 None:intergenic 30.0%
! GTTTTCACATAAGCTATAAG+TGG - chr1_2:14107966-14107985 None:intergenic 30.0%
GATGCAGATTAAGTTAGATA+AGG + chr1_2:14108055-14108074 Msa0057890:intron 30.0%
! GAGGATTTGGTAAAGAATTT+GGG + chr1_2:14108125-14108144 Msa0057890:CDS 30.0%
!! TTGGTGTGAAGGATTTTAAT+TGG + chr1_2:14108223-14108242 Msa0057890:intron 30.0%
!! CTTGAAATTGCTTTTCTGAT+TGG + chr1_2:14108405-14108424 Msa0057890:intron 30.0%
TTGCAATTTCAGAAGATACA+TGG + chr1_2:14108526-14108545 Msa0057890:CDS 30.0%
TAAAATACACCTCAAAGAAG+AGG + chr1_2:14108578-14108597 Msa0057890:CDS 30.0%
!!! GTTCTTTATTTTTCACTGCA+TGG + chr1_2:14108717-14108736 Msa0057890:intron 30.0%
AAGAATATAGGTGTTCTTGA+AGG + chr1_2:14108823-14108842 Msa0057890:intron 30.0%
TTATAGCTTCTTTAACTCTC+TGG + chr1_2:14108869-14108888 Msa0057890:intron 30.0%
CGTATACAATAATAAGTAGG+GGG + chr1_2:14108970-14108989 Msa0057890:intron 30.0%
CTTAGAAGGTAAACTCTTAT+GGG + chr1_2:14109018-14109037 Msa0057890:intron 30.0%
TTAAATTATCACAGGGTGAT+TGG + chr1_2:14109046-14109065 Msa0057890:intron 30.0%
AAACTTCAGGAAACATAGTT+AGG - chr1_2:14109091-14109110 None:intergenic 30.0%
GTTTCCTGAAGTTTAAAAGA+TGG + chr1_2:14109097-14109116 Msa0057890:intron 30.0%
! AATTGGTCTATTGCTAAATC+TGG + chr1_2:14109187-14109206 Msa0057890:intron 30.0%
TTAACTTCCCTATCTATATC+TGG + chr1_2:14109262-14109281 Msa0057890:CDS 30.0%
TAACTTCCCTATCTATATCT+GGG + chr1_2:14109263-14109282 Msa0057890:CDS 30.0%
GCTGATTGAAGAGTAAAATA+TGG - chr1_2:14109463-14109482 None:intergenic 30.0%
TAAATGATGTGAAGGCTATA+TGG + chr1_2:14109593-14109612 Msa0057890:CDS 30.0%
ACTATTTATGTGATACCCAA+CGG + chr1_2:14109693-14109712 Msa0057890:intron 30.0%
GATATCTTTATATGTTCCGT+TGG - chr1_2:14109712-14109731 None:intergenic 30.0%
ATAAAGATATCCACTTCTCT+TGG + chr1_2:14109721-14109740 Msa0057890:intron 30.0%
CTCAAAAAGCTCAAATACTT+GGG - chr1_2:14109981-14110000 None:intergenic 30.0%
ACTCAAAAAGCTCAAATACT+TGG - chr1_2:14109982-14110001 None:intergenic 30.0%
!! ACAAATGTTCTTTTTGGCAT+TGG + chr1_2:14110069-14110088 Msa0057890:intron 30.0%
!! CAAATGTTCTTTTTGGCATT+GGG + chr1_2:14110070-14110089 Msa0057890:intron 30.0%
ATTTCTCGTGATACATTCAA+TGG - chr1_2:14110125-14110144 None:intergenic 30.0%
TGACAAAGAAAAGAAAGGTA+TGG + chr1_2:14110247-14110266 Msa0057890:intron 30.0%
CATTGTTAACTGATGAAATG+GGG - chr1_2:14110595-14110614 None:intergenic 30.0%
! TTAACAATGTAGCTGATTCT+TGG + chr1_2:14110606-14110625 Msa0057890:intron 30.0%
! TACATATCTAGAATGAAAGC+TGG + chr1_2:14110679-14110698 Msa0057890:CDS 30.0%
TCTGAAGAAGAAAAACTTTG+AGG + chr1_2:14110771-14110790 Msa0057890:CDS 30.0%
TCTTATCTTCATAATCCATC+AGG - chr1_2:14110947-14110966 None:intergenic 30.0%
! TTCTAAAGACAAGGAACTAA+AGG + chr1_2:14111010-14111029 Msa0057890:CDS 30.0%
! ATTCTAGAAGCAAAATCCTT+GGG - chr1_2:14111477-14111496 None:intergenic 30.0%
! AATTCTAGAAGCAAAATCCT+TGG - chr1_2:14111478-14111497 None:intergenic 30.0%
!!! TTTTTTACTCATGTTGCTGT+CGG + chr1_2:14111677-14111696 Msa0057890:three_prime_UTR 30.0%
! CATGATAGATGTTTTATAGC+TGG - chr1_2:14112033-14112052 None:intergenic 30.0%
!! CAATATTGCTTTTCGTATTG+CGG - chr1_2:14112076-14112095 None:intergenic 30.0%
! ATTACTACTGTCCTCAATTT+TGG + chr1_2:14112110-14112129 Msa0057890:three_prime_UTR 30.0%
! AATTTCTTGAAGTCTTATGC+GGG - chr1_2:14112176-14112195 None:intergenic 30.0%
! CAATTTCTTGAAGTCTTATG+CGG - chr1_2:14112177-14112196 None:intergenic 30.0%
CTTCAAGAAATTGTTTAGTG+TGG + chr1_2:14112184-14112203 Msa0057890:three_prime_UTR 30.0%
! AAGTGTCACTATGTAATGGA+TGG - chr1_2:14106323-14106342 None:intergenic 35.0%
! TTACTGGAATTTTCCTTGCT+GGG - chr1_2:14106473-14106492 None:intergenic 35.0%
CAGTGTAAACAATTTCGAGA+AGG - chr1_2:14106568-14106587 None:intergenic 35.0%
TTTACACTGTCATTGCAATG+AGG + chr1_2:14106579-14106598 Msa0057890:exon 35.0%
AGTTTCAAGCTGAAGTTTCA+AGG + chr1_2:14107124-14107143 Msa0057890:CDS 35.0%
TGCGGTGACAAAAATTGAAT+AGG + chr1_2:14107305-14107324 Msa0057890:intron 35.0%
AAGTTCTATATTGTAGGCAC+TGG + chr1_2:14107614-14107633 Msa0057890:intron 35.0%
TGTCTTTATCAGTAAGGGAT+AGG - chr1_2:14107653-14107672 None:intergenic 35.0%
!! GATAAAGACATTTTGGGTGA+AGG + chr1_2:14107663-14107682 Msa0057890:CDS 35.0%
TGATAAGGACCAAAGAATGA+TGG + chr1_2:14107787-14107806 Msa0057890:intron 35.0%
! GTGGTTTTCATAAGCTAACA+TGG - chr1_2:14107947-14107966 None:intergenic 35.0%
ATCCTATCTATTAGAGACAG+AGG + chr1_2:14108086-14108105 Msa0057890:CDS 35.0%
TACCTCTGTCTCTAATAGAT+AGG - chr1_2:14108091-14108110 None:intergenic 35.0%
! TCTATTAGAGACAGAGGTAT+TGG + chr1_2:14108092-14108111 Msa0057890:CDS 35.0%
! GGAGGATTTGGTAAAGAATT+TGG + chr1_2:14108124-14108143 Msa0057890:CDS 35.0%
! TGAAGTTCCAGATTTTGCTA+TGG - chr1_2:14108153-14108172 None:intergenic 35.0%
! ATAGCAAAATCTGGAACTTC+AGG + chr1_2:14108152-14108171 Msa0057890:CDS 35.0%
! AATGTTTGCCGTTTGTGATT+TGG + chr1_2:14108204-14108223 Msa0057890:intron 35.0%
AGTGGTGATCTCAATCTAAT+TGG + chr1_2:14108287-14108306 Msa0057890:CDS 35.0%
GTGGTGATCTCAATCTAATT+GGG + chr1_2:14108288-14108307 Msa0057890:CDS 35.0%
CTCAATCTAATTGGGCAATT+TGG + chr1_2:14108296-14108315 Msa0057890:CDS 35.0%
! CTTTTCTGATTGGTATGTTG+TGG + chr1_2:14108415-14108434 Msa0057890:intron 35.0%
! TGGTATGTTGTGGATGTTTT+TGG + chr1_2:14108425-14108444 Msa0057890:intron 35.0%
!!! TTATGCCAGCCTATTGATTT+TGG + chr1_2:14108453-14108472 Msa0057890:intron 35.0%
CATTTCCAAAATCAATAGGC+TGG - chr1_2:14108461-14108480 None:intergenic 35.0%
TTGGAAATGATCTGACTTTC+AGG + chr1_2:14108472-14108491 Msa0057890:intron 35.0%
! ATCTGACTTTCAGGTATGTA+TGG + chr1_2:14108481-14108500 Msa0057890:intron 35.0%
! TCTGACTTTCAGGTATGTAT+GGG + chr1_2:14108482-14108501 Msa0057890:intron 35.0%
AGTGCAAATTGTTGACATCT+AGG - chr1_2:14108759-14108778 None:intergenic 35.0%
CTTAAGCATGAACAAAGTGT+AGG - chr1_2:14108806-14108825 None:intergenic 35.0%
CCATAAGAGTTTACCTTCTA+AGG - chr1_2:14109020-14109039 None:intergenic 35.0%
CCTTAGAAGGTAAACTCTTA+TGG + chr1_2:14109017-14109036 Msa0057890:intron 35.0%
! TCTGCCATCTTTTAAACTTC+AGG - chr1_2:14109104-14109123 None:intergenic 35.0%
!! CTTCTGTTTTTCACAGGAAT+TGG + chr1_2:14109218-14109237 Msa0057890:intron 35.0%
AACTTCCCTATCTATATCTG+GGG + chr1_2:14109264-14109283 Msa0057890:CDS 35.0%
!!! TCCTTCACTGTCTTTGTTTT+AGG - chr1_2:14109550-14109569 None:intergenic 35.0%
GGAACTCTTAAATGATGTGA+AGG + chr1_2:14109585-14109604 Msa0057890:CDS 35.0%
TAGTGATGGCAATATTACCT+TGG - chr1_2:14109677-14109696 None:intergenic 35.0%
GGGTATCACATAAATAGTGA+TGG - chr1_2:14109691-14109710 None:intergenic 35.0%
TCTAACATACAACTTCAGGT+TGG - chr1_2:14109922-14109941 None:intergenic 35.0%
AAGCTTACGGATCATATCAA+GGG - chr1_2:14110201-14110220 None:intergenic 35.0%
TCCACTGACAAAGAAAAGAA+AGG + chr1_2:14110242-14110261 Msa0057890:CDS 35.0%
! ACCTTTCTTTTCTTTGTCAG+TGG - chr1_2:14110246-14110265 None:intergenic 35.0%
TGATAAACGATTTCTGTTGG+TGG - chr1_2:14110506-14110525 None:intergenic 35.0%
! ATTTTCCAGTTGTTCTTTGC+TGG - chr1_2:14110734-14110753 None:intergenic 35.0%
GCATCAAGTATTCATCAACT+GGG - chr1_2:14110920-14110939 None:intergenic 35.0%
TGCATCAAGTATTCATCAAC+TGG - chr1_2:14110921-14110940 None:intergenic 35.0%
ATACTTGATGCAATACCTGA+TGG + chr1_2:14110929-14110948 Msa0057890:CDS 35.0%
! ATCGACATTGTCATTTGCAA+GGG - chr1_2:14111072-14111091 None:intergenic 35.0%
GTAGTGGTGACATCAAAATT+TGG + chr1_2:14111131-14111150 Msa0057890:CDS 35.0%
TGGTGACATCAAAATTTGGT+TGG + chr1_2:14111135-14111154 Msa0057890:CDS 35.0%
! CAAATTTAGAACGTACCTCA+GGG - chr1_2:14111301-14111320 None:intergenic 35.0%
! TCAAATTTAGAACGTACCTC+AGG - chr1_2:14111302-14111321 None:intergenic 35.0%
! TTCAACATAGTTGGGCTTTT+TGG + chr1_2:14111351-14111370 Msa0057890:intron 35.0%
!!! GGCTTTTTGGTTTACTCAAT+TGG + chr1_2:14111364-14111383 Msa0057890:intron 35.0%
!! ACTCAATTGGCTTACTTTTC+AGG + chr1_2:14111377-14111396 Msa0057890:intron 35.0%
TTTCTTGTTGAATGATCCCA+AGG + chr1_2:14111458-14111477 Msa0057890:CDS 35.0%
CAGCAACATGAGTAAAAAAG+AGG - chr1_2:14111676-14111695 None:intergenic 35.0%
GGAAACTAAAACTCATGACA+GGG - chr1_2:14111749-14111768 None:intergenic 35.0%
AGGAAACTAAAACTCATGAC+AGG - chr1_2:14111750-14111769 None:intergenic 35.0%
TAAGACTAATGACTGTGCTA+AGG - chr1_2:14111803-14111822 None:intergenic 35.0%
CTGATCATTTATAAAGTGGG+TGG - chr1_2:14111897-14111916 None:intergenic 35.0%
! TAAATGTTGGTTACCATTGG+AGG - chr1_2:14111965-14111984 None:intergenic 35.0%
CGCAATACGAAAAGCAATAT+TGG + chr1_2:14112074-14112093 Msa0057890:three_prime_UTR 35.0%
GAGAAATTCTGCCAAAATTG+AGG - chr1_2:14112124-14112143 None:intergenic 35.0%
AAATTCTGAGTCGTCCATGT+GGG + chr1_2:14106296-14106315 Msa0057890:five_prime_UTR 40.0%
! GTTACTGGAATTTTCCTTGC+TGG - chr1_2:14106474-14106493 None:intergenic 40.0%
!! GAAGGTTCTAAGAGAACGTT+TGG - chr1_2:14106550-14106569 None:intergenic 40.0%
AAGAGAGAGAAGAAGAAGAG+TGG - chr1_2:14106621-14106640 None:intergenic 40.0%
CGCACATTTCATTTCAATGG+TGG + chr1_2:14106800-14106819 Msa0057890:intron 40.0%
AAATTTCAAGCGAATGCGGA+AGG + chr1_2:14106861-14106880 Msa0057890:CDS 40.0%
! TGGTGGATCTACTACTTCAT+CGG - chr1_2:14106892-14106911 None:intergenic 40.0%
TGAAGTAGTAGATCCACCAA+AGG + chr1_2:14106893-14106912 Msa0057890:CDS 40.0%
! AGTTTTTCTTCCACCTTTGG+TGG - chr1_2:14106909-14106928 None:intergenic 40.0%
CCAAAGGTGGAAGAAAAACT+CGG + chr1_2:14106909-14106928 Msa0057890:CDS 40.0%
CCTCTTGACAACATCTGAAT+CGG - chr1_2:14106958-14106977 None:intergenic 40.0%
TGTGTGTGAATGAAGGGAAT+CGG + chr1_2:14107056-14107075 Msa0057890:intron 40.0%
AGCTGAAGTTTCAAGGCTTA+TGG + chr1_2:14107131-14107150 Msa0057890:CDS 40.0%
! CATTTGAAATCAGTTCCCTG+AGG - chr1_2:14107197-14107216 None:intergenic 40.0%
ACAAACCTGGATTTCAAGCT+TGG - chr1_2:14107697-14107716 None:intergenic 40.0%
!! CAGAGGTATTGGTATGACAA+AGG + chr1_2:14108103-14108122 Msa0057890:CDS 40.0%
!! AGGTATTGGTATGACAAAGG+AGG + chr1_2:14108106-14108125 Msa0057890:CDS 40.0%
TGGTATGACAAAGGAGGATT+TGG + chr1_2:14108112-14108131 Msa0057890:CDS 40.0%
TTGGGTACCATAGCAAAATC+TGG + chr1_2:14108143-14108162 Msa0057890:CDS 40.0%
CCTTCACACCAAATCACAAA+CGG - chr1_2:14108215-14108234 None:intergenic 40.0%
GTTGAGAAAATGCAGACAAG+TGG + chr1_2:14108269-14108288 Msa0057890:CDS 40.0%
! CTAATTGGGCAATTTGGAGT+TGG + chr1_2:14108302-14108321 Msa0057890:CDS 40.0%
! GTATGGGAATCTAAAGCTGA+TGG + chr1_2:14108498-14108517 Msa0057890:CDS 40.0%
GATACATGGAATGAACCACT+AGG + chr1_2:14108540-14108559 Msa0057890:CDS 40.0%
TGGAGTATGCATACCTTAGA+AGG + chr1_2:14109004-14109023 Msa0057890:intron 40.0%
TGCTTCCCCAGATATAGATA+GGG - chr1_2:14109272-14109291 None:intergenic 40.0%
TTGCTTCCCCAGATATAGAT+AGG - chr1_2:14109273-14109292 None:intergenic 40.0%
TCATCTTCACTTTCCTCCTT+GGG - chr1_2:14109493-14109512 None:intergenic 40.0%
TTCATCTTCACTTTCCTCCT+TGG - chr1_2:14109494-14109513 None:intergenic 40.0%
GCCTAAAACAAAGACAGTGA+AGG + chr1_2:14109546-14109565 Msa0057890:CDS 40.0%
TATATGGCTGAGGAATCCAA+AGG + chr1_2:14109609-14109628 Msa0057890:CDS 40.0%
ATATTACCTTGGCAAGAGAG+TGG - chr1_2:14109666-14109685 None:intergenic 40.0%
GCGATGACAAACCTTTATCA+TGG + chr1_2:14109793-14109812 Msa0057890:CDS 40.0%
GTAAAGTGGCTCCATGATAA+AGG - chr1_2:14109807-14109826 None:intergenic 40.0%
CTCGTCTAACATACAACTTC+AGG - chr1_2:14109926-14109945 None:intergenic 40.0%
!! TTCTTTTTGGCATTGGGAAC+AGG + chr1_2:14110076-14110095 Msa0057890:intron 40.0%
!! TCTTTTTGGCATTGGGAACA+GGG + chr1_2:14110077-14110096 Msa0057890:intron 40.0%
! GCAAAGTGTCAGAATCAACA+AGG - chr1_2:14110103-14110122 None:intergenic 40.0%
CAAGCTTACGGATCATATCA+AGG - chr1_2:14110202-14110221 None:intergenic 40.0%
AGGTATGGTGTAATGACTGT+TGG + chr1_2:14110262-14110281 Msa0057890:intron 40.0%
GGTATGGTGTAATGACTGTT+GGG + chr1_2:14110263-14110282 Msa0057890:intron 40.0%
CGCTCGCTTACATTTGAAAA+GGG - chr1_2:14110329-14110348 None:intergenic 40.0%
! CCTTTTCAAATGTAAGCGAG+CGG + chr1_2:14110327-14110346 Msa0057890:intron 40.0%
AAAGTCAGTGAAGGGAATTC+AGG - chr1_2:14110356-14110375 None:intergenic 40.0%
AGAAGCGAAAAGTCAGTGAA+GGG - chr1_2:14110364-14110383 None:intergenic 40.0%
TAGAAGCGAAAAGTCAGTGA+AGG - chr1_2:14110365-14110384 None:intergenic 40.0%
TCTCTTCTCATCAACATCAG+AGG - chr1_2:14110419-14110438 None:intergenic 40.0%
! TCTGATGTTGATGAGAAGAG+AGG + chr1_2:14110418-14110437 Msa0057890:CDS 40.0%
!! ACCAAGTTCTGGAATGAGTT+TGG + chr1_2:14110448-14110467 Msa0057890:CDS 40.0%
TCCAAACTCATTCCAGAACT+TGG - chr1_2:14110452-14110471 None:intergenic 40.0%
TATTTACAGCACCAAGTCTG+AGG + chr1_2:14110633-14110652 Msa0057890:intron 40.0%
ATTTACAGCACCAAGTCTGA+GGG + chr1_2:14110634-14110653 Msa0057890:intron 40.0%
TGTCAATTTACCCTCAGACT+TGG - chr1_2:14110647-14110666 None:intergenic 40.0%
TAGAATGAAAGCTGGACAGA+AGG + chr1_2:14110687-14110706 Msa0057890:CDS 40.0%
! TTTTCTTCTTCAGACGCTCA+AGG - chr1_2:14110765-14110784 None:intergenic 40.0%
GAAGTTCCAAAATGTGTCCA+AGG + chr1_2:14110965-14110984 Msa0057890:CDS 40.0%
TTCCAAAATGTGTCCAAGGA+GGG + chr1_2:14110969-14110988 Msa0057890:CDS 40.0%
GGAACTAAAGGAATCCTTCA+AGG + chr1_2:14111022-14111041 Msa0057890:CDS 40.0%
CCACTTAGTTAGATCCTTGA+AGG - chr1_2:14111039-14111058 None:intergenic 40.0%
CCTTCAAGGATCTAACTAAG+TGG + chr1_2:14111036-14111055 Msa0057890:CDS 40.0%
TCAAGGATCTAACTAAGTGG+TGG + chr1_2:14111039-14111058 Msa0057890:CDS 40.0%
! CATCGACATTGTCATTTGCA+AGG - chr1_2:14111073-14111092 None:intergenic 40.0%
TGTGAAGATATCCAACCGAT+TGG + chr1_2:14111094-14111113 Msa0057890:CDS 40.0%
!! CACAAGGAGTGTTATCCAAT+CGG - chr1_2:14111112-14111131 None:intergenic 40.0%
TTTGATGTCACCACTACACA+AGG - chr1_2:14111128-14111147 None:intergenic 40.0%
ATTTGGTTGGAGTGCAAACA+TGG + chr1_2:14111148-14111167 Msa0057890:CDS 40.0%
AAAAAGCAAGCATACATGCG+CGG + chr1_2:14111206-14111225 Msa0057890:CDS 40.0%
! AAATGACGATGGTGATGTCA+AGG + chr1_2:14111626-14111645 Msa0057890:CDS 40.0%
!! TGTCGGTTGCAGTTATTTCT+TGG + chr1_2:14111694-14111713 Msa0057890:three_prime_UTR 40.0%
AAGGCAAAATTCCAACGGAT+GGG - chr1_2:14111784-14111803 None:intergenic 40.0%
TAAGGCAAAATTCCAACGGA+TGG - chr1_2:14111785-14111804 None:intergenic 40.0%
GTGCTAAGGCAAAATTCCAA+CGG - chr1_2:14111789-14111808 None:intergenic 40.0%
! TCAGCTTTTATTGCCTCCAA+TGG + chr1_2:14111949-14111968 Msa0057890:three_prime_UTR 40.0%
GAAATTCTGAGTCGTCCATG+TGG + chr1_2:14106295-14106314 Msa0057890:five_prime_UTR 45.0%
!! ATGTAATGGATGGACCCACA+TGG - chr1_2:14106313-14106332 None:intergenic 45.0%
TTGATCTAGTTGCTTCGACG+TGG - chr1_2:14106362-14106381 None:intergenic 45.0%
!! GCAACGTGGCGTTGATTAAT+TGG - chr1_2:14106386-14106405 None:intergenic 45.0%
ATGATCTGACGGTGAAGGAT+GGG - chr1_2:14106415-14106434 None:intergenic 45.0%
CTGTCATTGCAATGAGGAAG+TGG + chr1_2:14106585-14106604 Msa0057890:exon 45.0%
GAGAGAAGAAGAAGAGTGGA+AGG - chr1_2:14106617-14106636 None:intergenic 45.0%
CTTCTTCTTCTCGCAGATCA+AGG + chr1_2:14106644-14106663 Msa0057890:CDS 45.0%
AGTAGTAGATCCACCAAAGG+TGG + chr1_2:14106896-14106915 Msa0057890:CDS 45.0%
! CCGAGTTTTTCTTCCACCTT+TGG - chr1_2:14106912-14106931 None:intergenic 45.0%
GAATCGGTTGAAAGTCCATG+AGG - chr1_2:14106942-14106961 None:intergenic 45.0%
CCGATTCAGATGTTGTCAAG+AGG + chr1_2:14106955-14106974 Msa0057890:CDS 45.0%
!! TCGGTGTGTGTTTAGTTCTG+CGG + chr1_2:14107287-14107306 Msa0057890:intron 45.0%
!!! AATTTTGGCTCCTCTCGAAG+TGG + chr1_2:14107518-14107537 Msa0057890:intron 45.0%
! ATGTTTGGTTCCACTTCGAG+AGG - chr1_2:14107531-14107550 None:intergenic 45.0%
!! TGTAGGCACTGGACAAGATT+AGG + chr1_2:14107625-14107644 Msa0057890:intron 45.0%
!! CCGTTTGTGATTTGGTGTGA+AGG + chr1_2:14108212-14108231 Msa0057890:intron 45.0%
! AGTAGGGGGTAGTGTTTCTA+TGG + chr1_2:14108984-14109003 Msa0057890:intron 45.0%
CTATATCTGGGGAAGCAAAG+AGG + chr1_2:14109275-14109294 Msa0057890:CDS 45.0%
!! AAGCAAAGAGGTTGATGTGG+AGG + chr1_2:14109287-14109306 Msa0057890:CDS 45.0%
CATCTTCACTTTCCTCCTTG+GGG - chr1_2:14109492-14109511 None:intergenic 45.0%
TGAAGGAAACGACTTACGAG+TGG + chr1_2:14109563-14109582 Msa0057890:CDS 45.0%
GAAGGAAACGACTTACGAGT+GGG + chr1_2:14109564-14109583 Msa0057890:CDS 45.0%
ATGTGAAGGCTATATGGCTG+AGG + chr1_2:14109599-14109618 Msa0057890:CDS 45.0%
GAATCCAAAGGAGGTTACAG+AGG + chr1_2:14109621-14109640 Msa0057890:CDS 45.0%
TCTTCCTCTGTAACCTCCTT+TGG - chr1_2:14109628-14109647 None:intergenic 45.0%
ATTCTACCACTCTCTTGCCA+AGG + chr1_2:14109657-14109676 Msa0057890:CDS 45.0%
TCATCAAGCTCCAAGAGAAG+TGG - chr1_2:14109734-14109753 None:intergenic 45.0%
! GTTGGGGATTTGTGTTTTGC+AGG + chr1_2:14109764-14109783 Msa0057890:intron 45.0%
CATCACCTTCAGCAGTAAAG+TGG - chr1_2:14109821-14109840 None:intergenic 45.0%
! GTGCTTTAGGTGGCACATAA+AGG - chr1_2:14109860-14109879 None:intergenic 45.0%
! TACAAGTCCTGAGGTGCTTT+AGG - chr1_2:14109873-14109892 None:intergenic 45.0%
TAACTCTCGTACAAGTCCTG+AGG - chr1_2:14109882-14109901 None:intergenic 45.0%
CCGCTCGCTTACATTTGAAA+AGG - chr1_2:14110330-14110349 None:intergenic 45.0%
GAGGTCAATACACCAAGTTC+TGG + chr1_2:14110437-14110456 Msa0057890:CDS 45.0%
TGGAACCAGCAAAGAACAAC+TGG + chr1_2:14110726-14110745 Msa0057890:CDS 45.0%
TTCTTCAGACGCTCAAGGAA+TGG - chr1_2:14110760-14110779 None:intergenic 45.0%
GTTCCAAAATGTGTCCAAGG+AGG + chr1_2:14110968-14110987 Msa0057890:CDS 45.0%
! CGGGAAGGATTCTAAAGACA+AGG + chr1_2:14111001-14111020 Msa0057890:CDS 45.0%
!! AGGAGTGTTATCCAATCGGT+TGG - chr1_2:14111108-14111127 None:intergenic 45.0%
GGATAACACTCCTTGTGTAG+TGG + chr1_2:14111115-14111134 Msa0057890:CDS 45.0%
TCCTAGACACCCTATCATCA+AGG + chr1_2:14111250-14111269 Msa0057890:CDS 45.0%
! TCCTTGATGATAGGGTGTCT+AGG - chr1_2:14111254-14111273 None:intergenic 45.0%
ACCCTATCATCAAGGAACTC+CGG + chr1_2:14111258-14111277 Msa0057890:CDS 45.0%
! GGATGAGAGTGTGAAGCAAA+CGG + chr1_2:14111398-14111417 Msa0057890:intron 45.0%
! CACTTTCGAAAAGTGCAGTC+TGG - chr1_2:14111437-14111456 None:intergenic 45.0%
! CAGACTGCACTTTTCGAAAG+TGG + chr1_2:14111435-14111454 Msa0057890:CDS 45.0%
GGAAGATGAGACTGAAGTTG+AGG + chr1_2:14111551-14111570 Msa0057890:CDS 45.0%
! TCATCAGCTTCGTTTGAAGC+AGG - chr1_2:14111603-14111622 None:intergenic 45.0%
TGCTTCAAACGAAGCTGATG+AGG + chr1_2:14111602-14111621 Msa0057890:CDS 45.0%
GCTGATGAGGTAAATGACGA+TGG + chr1_2:14111615-14111634 Msa0057890:CDS 45.0%
! ACGGATGGGTCCTTTAACTT+AGG - chr1_2:14111770-14111789 None:intergenic 45.0%
AAGTTAAAGGACCCATCCGT+TGG + chr1_2:14111770-14111789 Msa0057890:three_prime_UTR 45.0%
!! AGGATGGGTTAAGTGCAACG+TGG - chr1_2:14106400-14106419 None:intergenic 50.0%
GATGATCTGACGGTGAAGGA+TGG - chr1_2:14106416-14106435 None:intergenic 50.0%
CATGGATGATCTGACGGTGA+AGG - chr1_2:14106420-14106439 None:intergenic 50.0%
TGCCAGCATGGATGATCTGA+CGG - chr1_2:14106426-14106445 None:intergenic 50.0%
TCCTTGCTGGGACGAAGAAT+GGG - chr1_2:14106461-14106480 None:intergenic 50.0%
TTCCTTGCTGGGACGAAGAA+TGG - chr1_2:14106462-14106481 None:intergenic 50.0%
!! AAACTCGGTGCTGTTCCTCA+TGG + chr1_2:14106924-14106943 Msa0057890:CDS 50.0%
GAGATCCCTTCGCAGTAATG+CGG + chr1_2:14107092-14107111 Msa0057890:CDS 50.0%
CTTCTCCGCATTACTGCGAA+GGG - chr1_2:14107100-14107119 None:intergenic 50.0%
ACTTCTCCGCATTACTGCGA+AGG - chr1_2:14107101-14107120 None:intergenic 50.0%
CAACGCCAAGCTTGAAATCC+AGG + chr1_2:14107689-14107708 Msa0057890:CDS 50.0%
TGGAATGAACCACTAGGACG+TGG + chr1_2:14108546-14108565 Msa0057890:CDS 50.0%
ATCTCTGTTCCACGTCCTAG+TGG - chr1_2:14108558-14108577 None:intergenic 50.0%
ATACTCTTCCACGTACTCGC+TGG - chr1_2:14108604-14108623 None:intergenic 50.0%
!! GGGAAGCAAAGAGGTTGATG+TGG + chr1_2:14109284-14109303 Msa0057890:CDS 50.0%
AGACTCGTCGTCTTCATCAG+CGG - chr1_2:14109316-14109335 None:intergenic 50.0%
TGAAGACGACGAGTCTTCTG+AGG + chr1_2:14109320-14109339 Msa0057890:CDS 50.0%
TCAATCAGCTGAAAGCCCCA+AGG + chr1_2:14109474-14109493 Msa0057890:intron 50.0%
ATGGCTGAGGAATCCAAAGG+AGG + chr1_2:14109612-14109631 Msa0057890:CDS 50.0%
! TGGAGCCACTTTACTGCTGA+AGG + chr1_2:14109813-14109832 Msa0057890:CDS 50.0%
! AAGTCCTGAGGTGCTTTAGG+TGG - chr1_2:14109870-14109889 None:intergenic 50.0%
! CTTTGTCAGTGGACTCGTCA+GGG - chr1_2:14110235-14110254 None:intergenic 50.0%
! TCTTTGTCAGTGGACTCGTC+AGG - chr1_2:14110236-14110255 None:intergenic 50.0%
! GACCCTCCTTGGACACATTT+TGG - chr1_2:14110974-14110993 None:intergenic 50.0%
! TCCAAGGAGGGTCTGAAACT+CGG + chr1_2:14110981-14111000 Msa0057890:CDS 50.0%
! CCCGGAGTTCCTTGATGATA+GGG - chr1_2:14111262-14111281 None:intergenic 50.0%
CCCTATCATCAAGGAACTCC+GGG + chr1_2:14111259-14111278 Msa0057890:CDS 50.0%
! TCCCGGAGTTCCTTGATGAT+AGG - chr1_2:14111263-14111282 None:intergenic 50.0%
CAGTCCTGATGCAACAGTTG+AGG + chr1_2:14111527-14111546 Msa0057890:CDS 50.0%
TCCTGATGCAACAGTTGAGG+AGG + chr1_2:14111530-14111549 Msa0057890:CDS 50.0%
TCCTCCTCAACTGTTGCATC+AGG - chr1_2:14111534-14111553 None:intergenic 50.0%
CACCGTCAGATCATCCATGC+TGG + chr1_2:14106421-14106440 Msa0057890:five_prime_UTR 55.0%
AGCGGTTGGATTTGCCAGCA+TGG - chr1_2:14106438-14106457 None:intergenic 55.0%
TCCCATTCTTCGTCCCAGCA+AGG + chr1_2:14106457-14106476 Msa0057890:five_prime_UTR 55.0%
! ACTCGCTGGCCTCTTCTTTG+AGG - chr1_2:14108590-14108609 None:intergenic 55.0%
GACTCGTCGTCTTCATCAGC+GGG - chr1_2:14109315-14109334 None:intergenic 55.0%
! CGACGAGTCTTCTGAGGAAG+AGG + chr1_2:14109326-14109345 Msa0057890:CDS 55.0%
ATCAGCTGAAAGCCCCAAGG+AGG + chr1_2:14109477-14109496 Msa0057890:intron 55.0%
! TGTGCCACCTAAAGCACCTC+AGG + chr1_2:14109863-14109882 Msa0057890:CDS 55.0%
GATCCGTAAGCTTGCCGAAG+AGG + chr1_2:14110208-14110227 Msa0057890:CDS 55.0%
GGTCCTCTTCGGCAAGCTTA+CGG - chr1_2:14110214-14110233 None:intergenic 55.0%
! CCAAGGAGGGTCTGAAACTC+GGG + chr1_2:14110982-14111001 Msa0057890:CDS 55.0%
AAGCATACATGCGCGGCAAG+AGG + chr1_2:14111213-14111232 Msa0057890:CDS 55.0%
AGCATACATGCGCGGCAAGA+GGG + chr1_2:14111214-14111233 Msa0057890:CDS 55.0%
GGACGAAGAATGGGAGCGGT+TGG - chr1_2:14106452-14106471 None:intergenic 60.0%
GCTGGGACGAAGAATGGGAG+CGG - chr1_2:14106456-14106475 None:intergenic 60.0%
AGAAGAGGCCAGCGAGTACG+TGG + chr1_2:14108593-14108612 Msa0057890:CDS 60.0%
GGACTCGTCAGGGTCCTCTT+CGG - chr1_2:14110225-14110244 None:intergenic 60.0%
CCCGAGTTTCAGACCCTCCT+TGG - chr1_2:14110985-14111004 None:intergenic 60.0%
! GGAGGGTCTGAAACTCGGGA+AGG + chr1_2:14110986-14111005 Msa0057890:CDS 60.0%
CTGGCGTGCGTGCGTGCATA+AGG + chr1_2:14108888-14108907 Msa0057890:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 14106294 14112266 14106294 ID=Msa0057890;Name=Msa0057890
chr1_2 mRNA 14106294 14112266 14106294 ID=Msa0057890-mRNA-1;Parent=Msa0057890;Name=Msa0057890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=302|1|1|1|0.93|0.87|16|587|819
chr1_2 exon 14106294 14106665 14106294 ID=Msa0057890-mRNA-1:exon:5635;Parent=Msa0057890-mRNA-1
chr1_2 exon 14106856 14106976 14106856 ID=Msa0057890-mRNA-1:exon:5636;Parent=Msa0057890-mRNA-1
chr1_2 exon 14107071 14107224 14107071 ID=Msa0057890-mRNA-1:exon:5637;Parent=Msa0057890-mRNA-1
chr1_2 exon 14107630 14107710 14107630 ID=Msa0057890-mRNA-1:exon:5638;Parent=Msa0057890-mRNA-1
chr1_2 exon 14108062 14108173 14108062 ID=Msa0057890-mRNA-1:exon:5639;Parent=Msa0057890-mRNA-1
chr1_2 exon 14108264 14108390 14108264 ID=Msa0057890-mRNA-1:exon:5640;Parent=Msa0057890-mRNA-1
chr1_2 exon 14108494 14108632 14108494 ID=Msa0057890-mRNA-1:exon:5641;Parent=Msa0057890-mRNA-1
chr1_2 exon 14109234 14109354 14109234 ID=Msa0057890-mRNA-1:exon:5642;Parent=Msa0057890-mRNA-1
chr1_2 exon 14109482 14109678 14109482 ID=Msa0057890-mRNA-1:exon:5643;Parent=Msa0057890-mRNA-1
chr1_2 exon 14109786 14110001 14109786 ID=Msa0057890-mRNA-1:exon:5644;Parent=Msa0057890-mRNA-1
chr1_2 exon 14110098 14110263 14110098 ID=Msa0057890-mRNA-1:exon:5645;Parent=Msa0057890-mRNA-1
chr1_2 exon 14110407 14110545 14110407 ID=Msa0057890-mRNA-1:exon:5646;Parent=Msa0057890-mRNA-1
chr1_2 exon 14110642 14110792 14110642 ID=Msa0057890-mRNA-1:exon:5647;Parent=Msa0057890-mRNA-1
chr1_2 exon 14110900 14111304 14110900 ID=Msa0057890-mRNA-1:exon:5648;Parent=Msa0057890-mRNA-1
chr1_2 exon 14111399 14111734 14111399 ID=Msa0057890-mRNA-1:exon:5649;Parent=Msa0057890-mRNA-1
chr1_2 exon 14111755 14112266 14111755 ID=Msa0057890-mRNA-1:exon:5650;Parent=Msa0057890-mRNA-1
chr1_2 five_prime_UTR 14106294 14106595 14106294 ID=Msa0057890-mRNA-1:five_prime_utr;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14106596 14106665 14106596 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14106856 14106976 14106856 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14107071 14107224 14107071 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14107630 14107710 14107630 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14108062 14108173 14108062 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14108264 14108390 14108264 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14108494 14108632 14108494 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14109234 14109354 14109234 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14109482 14109678 14109482 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14109786 14110001 14109786 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14110098 14110263 14110098 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14110407 14110545 14110407 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14110642 14110792 14110642 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14110900 14111304 14110900 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 CDS 14111399 14111659 14111399 ID=Msa0057890-mRNA-1:cds;Parent=Msa0057890-mRNA-1
chr1_2 three_prime_UTR 14111660 14111734 14111660 ID=Msa0057890-mRNA-1:three_prime_utr;Parent=Msa0057890-mRNA-1
chr1_2 three_prime_UTR 14111755 14112266 14111755 ID=Msa0057890-mRNA-1:three_prime_utr;Parent=Msa0057890-mRNA-1
Gene Sequence

>Msa0057890

ATGAGGAAGTGGACGATTCCTTCCACTCTTCTTCTTCTCTCTCTTCTTCTTCTTCTTCTCGCAGATCAAGGTCAAAAATTTCAAGCGAATGCGGAAGGTAATTCCGATGAAGTAGTAGATCCACCAAAGGTGGAAGAAAAACTCGGTGCTGTTCCTCATGGACTTTCAACCGATTCAGATGTTGTCAAGAGGGAATCGGAGTCGATTTCGAAGAGATCCCTTCGCAGTAATGCGGAGAAGTTTGAGTTTCAAGCTGAAGTTTCAAGGCTTATGGATATTATCATCAATTCACTTTACAGTAATAAGGATATTTTCCTCAGGGAACTGATTTCAAATGCTTCTGATGCACTGGACAAGATTAGGTTCCTATCCCTTACTGATAAAGACATTTTGGGTGAAGGTGACAACGCCAAGCTTGAAATCCAGATTAAGTTAGATAAGGAAAAGAAAATCCTATCTATTAGAGACAGAGGTATTGGTATGACAAAGGAGGATTTGGTAAAGAATTTGGGTACCATAGCAAAATCTGGAACTTCAGCATTTGTTGAGAAAATGCAGACAAGTGGTGATCTCAATCTAATTGGGCAATTTGGAGTTGGTTTCTACTCTGTGTATCTTGTTGCTGACTATGTTGAAGTTATTAGCAAGCATAATGATGACAAACAGTATGTATGGGAATCTAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCACTAGGACGTGGAACAGAGATTAAAATACACCTCAAAGAAGAGGCCAGCGAGTACGTGGAAGAGTATAAGCTCAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATCTGGGGAAGCAAAGAGGTTGATGTGGAGGTTCCCGCTGATGAAGACGACGAGTCTTCTGAGGAAGAGGATACAACTGAAAGCCCCAAGGAGGAAAGTGAAGATGAAGATGCTGATAAAGATGAAGATGAAGAAAAAAAGCCTAAAACAAAGACAGTGAAGGAAACGACTTACGAGTGGGAACTCTTAAATGATGTGAAGGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAGGAAGAGTACACAAAATTCTACCACTCTCTTGCCAAGGATTTTAGCGATGACAAACCTTTATCATGGAGCCACTTTACTGCTGAAGGTGATGTCGAGTTCAAAGCAGTCCTTTATGTGCCACCTAAAGCACCTCAGGACTTGTACGAGAGTTATTACAATTCAAACAAATCCAACCTGAAGTTGTATGTTAGACGAGTGTTCATTTCAGATGAATTTGATGAATTGTTGCCCAAGTATTTGAGCTTTTTGAGTGGCCTTGTTGATTCTGACACTTTGCCATTGAATGTATCACGAGAAATGCTTCAACAACACAGCAGTCTGAAAACAATAAAAAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAAGCTTGCCGAAGAGGACCCTGACGAGTCCACTGACAAAGAAAAGAAAGAAGAGACATCCTCTGATGTTGATGAGAAGAGAGGTCAATACACCAAGTTCTGGAATGAGTTTGGAAAATCTATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGTTTATCAAAACTGCTCAGATTTGAAACCACCAAGTCTGAGGGTAAATTGACATCTCTTGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAATTCACCATTCCTTGAGCGTCTGAAGAAGAAAAACTTTGAGGTTATTTTCTTCACTGACCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAGAAGTTCCAAAATGTGTCCAAGGAGGGTCTGAAACTCGGGAAGGATTCTAAAGACAAGGAACTAAAGGAATCCTTCAAGGATCTAACTAAGTGGTGGAAAAATTCCCTTGCAAATGACAATGTCGATGATGTGAAGATATCCAACCGATTGGATAACACTCCTTGTGTAGTGGTGACATCAAAATTTGGTTGGAGTGCAAACATGGAGAGAATTATGCAGTCTCAAACTTTGTCAGATGCTAAAAAGCAAGCATACATGCGCGGCAAGAGGGTTCTTGAGATCAATCCTAGACACCCTATCATCAAGGAACTCCGGGAAAGAGTAGTTAAGAACCCTGAGGATGAGAGTGTGAAGCAAACGGCACAGCTGATGTACCAGACTGCACTTTTCGAAAGTGGTTTCTTGTTGAATGATCCCAAGGATTTTGCTTCTAGAATTTATGATTCAGTGAAGACTAGCTTAGACATCAGTCCTGATGCAACAGTTGAGGAGGAAGATGAGACTGAAGTTGAGGTTGAAAGTGAAACAAAAGAAGAAGCGCCTGCTTCAAACGAAGCTGATGAGGTAAATGACGATGGTGATGTCAAGGATGAGTTGTAG

Protein sequence

>Msa0057890

MRKWTIPSTLLLLSLLLLLLADQGQKFQANAEGNSDEVVDPPKVEEKLGAVPHGLSTDSDVVKRESESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKDILGEGDNAKLEIQIKLDKEKKILSIRDRGIGMTKEDLVKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKIHLKEEASEYVEEYKLKELVKRYSEFINFPIYIWGSKEVDVEVPADEDDESSEEEDTTESPKEESEDEDADKDEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDDKPLSWSHFTAEGDVEFKAVLYVPPKAPQDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLSGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDESTDKEKKEETSSDVDEKRGQYTKFWNEFGKSIKLGIIEDATNRNRLSKLLRFETTKSEGKLTSLDQYISRMKAGQKDIFYITGTSKEQLENSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKNSLANDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDAKKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKQTAQLMYQTALFESGFLLNDPKDFASRIYDSVKTSLDISPDATVEEEDETEVEVESETKEEAPASNEADEVNDDGDVKDEL*