AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1366330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366330 MtrunA17_Chr1g0187601 98.397 624 10 0 1 624 1 624 0.0 1285
Msa1366330 MtrunA17_Chr1g0167381 82.051 624 111 1 1 623 1 624 0.0 1091
Msa1366330 MtrunA17_Chr1g0183721 68.800 625 164 3 1 624 1 595 0.0 924
Msa1366330 MtrunA17_Chr3g0112341 46.845 523 252 9 79 588 136 645 1.47e-165 488
Msa1366330 MtrunA17_Chr5g0435751 45.866 508 236 7 89 589 123 598 2.32e-161 476
Msa1366330 MtrunA17_Chr1g0159741 45.349 516 252 11 91 593 141 639 1.46e-158 470
Msa1366330 MtrunA17_Chr1g0171781 41.100 618 331 9 8 614 8 603 4.02e-155 459
Msa1366330 MtrunA17_Chr7g0246701 43.704 540 271 12 92 614 102 625 2.40e-149 446
Msa1366330 MtrunA17_Chr8g0361791 40.157 635 331 15 5 624 10 610 4.64e-149 444
Msa1366330 MtrunA17_Chr8g0388881 42.910 543 275 13 89 614 96 620 8.91e-149 444
Msa1366330 MtrunA17_Chr5g0437501 44.821 502 252 9 100 588 101 590 2.72e-148 442
Msa1366330 MtrunA17_Chr5g0416991 39.938 641 336 17 1 624 1 609 1.31e-147 440
Msa1366330 MtrunA17_Chr4g0055031 39.399 632 339 15 2 617 3 606 1.46e-147 440
Msa1366330 MtrunA17_Chr8g0350391 42.802 514 267 9 91 588 105 607 1.32e-145 436
Msa1366330 MtrunA17_Chr3g0130381 41.497 588 301 14 41 614 218 776 2.47e-145 440
Msa1366330 MtrunA17_Chr1g0203741 42.647 544 276 14 90 614 91 617 1.31e-144 433
Msa1366330 MtrunA17_Chr3g0125511 43.289 529 269 12 99 614 232 742 2.66e-144 436
Msa1366330 MtrunA17_Chr6g0472571 41.697 554 279 12 91 623 105 635 4.49e-144 432
Msa1366330 MtrunA17_Chr7g0246681 41.852 540 289 9 82 614 66 587 6.94e-144 430
Msa1366330 MtrunA17_Chr8g0369481 38.523 623 325 11 11 617 11 591 1.98e-143 429
Msa1366330 MtrunA17_Chr8g0384431 43.849 504 256 11 100 589 298 788 4.99e-142 432
Msa1366330 MtrunA17_Chr8g0350351 41.132 530 283 10 94 614 91 600 4.36e-141 423
Msa1366330 MtrunA17_Chr3g0092501 39.002 641 335 17 2 623 3 606 4.82e-141 423
Msa1366330 MtrunA17_Chr3g0113981 43.750 496 259 8 100 590 175 655 4.70e-139 420
Msa1366330 MtrunA17_Chr7g0214551 43.536 526 268 13 91 598 43 557 6.58e-139 417
Msa1366330 MtrunA17_Chr5g0409411 37.760 625 332 12 10 619 13 595 2.48e-138 416
Msa1366330 MtrunA17_Chr8g0372471 42.938 531 277 12 71 590 358 873 2.80e-138 425
Msa1366330 MtrunA17_Chr5g0426281 34.873 628 354 12 9 614 76 670 3.03e-121 374
Msa1366330 MtrunA17_Chr3g0115931 36.182 550 314 11 89 614 152 688 6.95e-117 363
Msa1366330 MtrunA17_Chr1g0155141 35.472 530 303 11 93 614 201 699 1.16e-103 329
Msa1366330 MtrunA17_Chr5g0404771 50.391 256 111 5 99 353 328 568 1.03e-79 263
Msa1366330 MtrunA17_Chr4g0043121 32.082 293 189 4 89 375 84 372 9.43e-56 195
Msa1366330 MtrunA17_Chr5g0404761 40.996 261 133 9 341 587 1 254 2.09e-55 189
Msa1366330 MtrunA17_Chr4g0043131 46.199 171 74 3 445 597 2 172 1.10e-41 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1366330 AT1G04430.1 78.447 631 121 5 1 624 1 623 0.0 1042
Msa1366330 AT1G04430.3 78.447 631 121 5 1 624 1 623 0.0 1042
Msa1366330 AT1G04430.2 78.447 631 121 5 1 624 1 623 0.0 1042
Msa1366330 AT3G23300.2 77.724 624 123 6 3 624 2 611 0.0 1005
Msa1366330 AT3G23300.1 77.724 624 123 6 3 624 2 611 0.0 1005
Msa1366330 AT4G14360.1 78.778 622 117 6 3 624 2 608 0.0 981
Msa1366330 AT4G14360.2 78.778 622 117 6 3 624 2 608 0.0 981
Msa1366330 AT5G14430.1 63.339 581 201 4 42 614 28 604 0.0 767
Msa1366330 AT5G14430.2 62.823 581 204 4 42 614 28 604 0.0 762
Msa1366330 AT2G39750.1 45.558 529 267 8 68 588 154 669 1.68e-167 494
Msa1366330 AT1G77260.1 44.424 547 278 10 60 595 108 639 9.26e-166 489
Msa1366330 AT5G06050.1 45.098 510 255 8 89 588 147 641 2.82e-164 486
Msa1366330 AT3G10200.1 45.403 533 277 8 86 614 66 588 3.15e-161 475
Msa1366330 AT5G04060.1 45.038 524 275 7 93 614 85 597 3.86e-160 472
Msa1366330 AT3G10200.2 47.292 480 241 6 86 561 66 537 1.04e-152 453
Msa1366330 AT2G45750.1 43.853 545 271 11 90 614 86 615 6.76e-152 452
Msa1366330 AT4G10440.1 43.879 531 266 13 76 588 77 593 2.40e-150 448
Msa1366330 AT1G33170.1 43.654 520 265 10 85 588 104 611 3.08e-150 448
Msa1366330 AT5G64030.1 44.821 531 261 11 100 617 308 819 7.75e-148 448
Msa1366330 AT2G34300.2 44.571 525 260 11 102 614 252 757 1.44e-147 446
Msa1366330 AT2G34300.3 44.571 525 260 11 102 614 252 757 1.44e-147 446
Msa1366330 AT2G34300.1 44.571 525 260 11 102 614 252 757 1.44e-147 446
Msa1366330 AT3G51070.1 44.234 529 263 11 99 614 380 889 2.88e-146 446
Msa1366330 AT1G26850.2 39.937 636 330 16 4 619 10 613 1.46e-145 436
Msa1366330 AT1G26850.1 39.937 636 330 16 4 619 10 613 1.46e-145 436
Msa1366330 AT1G29470.1 43.898 549 276 13 79 614 228 757 2.41e-145 440
Msa1366330 AT1G29470.2 43.898 549 276 13 79 614 228 757 2.41e-145 440
Msa1366330 AT4G19120.1 39.071 581 327 8 55 623 34 599 2.59e-145 434
Msa1366330 AT4G19120.2 39.071 581 327 8 55 623 34 599 2.59e-145 434
Msa1366330 AT4G00740.1 38.907 604 327 13 20 614 23 593 1.38e-141 425
Msa1366330 AT4G00740.2 38.907 604 327 13 20 614 23 593 1.38e-141 425
Msa1366330 AT4G00750.1 37.915 633 346 16 3 614 16 622 6.38e-141 424
Msa1366330 AT2G40280.1 44.242 495 252 11 100 588 90 566 2.19e-138 416
Msa1366330 AT3G56080.1 43.434 495 259 10 100 588 114 593 3.30e-136 411
Msa1366330 AT2G43200.2 42.804 535 270 15 91 608 91 606 1.17e-135 410
Msa1366330 AT2G43200.1 42.804 535 270 15 91 608 91 606 1.17e-135 410
Msa1366330 AT1G31850.1 35.601 632 359 12 1 617 1 599 1.81e-135 409
Msa1366330 AT1G31850.2 35.601 632 359 12 1 617 1 599 1.81e-135 409
Msa1366330 AT1G31850.4 35.601 632 359 12 1 617 1 599 1.81e-135 409
Msa1366330 AT1G31850.3 35.601 632 359 12 1 617 1 599 1.81e-135 409
Msa1366330 AT3G51070.2 47.216 449 213 9 99 534 380 817 2.94e-135 416
Msa1366330 AT4G18030.1 40.883 521 266 10 88 588 82 580 6.75e-133 403
Msa1366330 AT3G56080.2 44.789 451 229 9 100 544 114 550 2.68e-127 386
Msa1366330 AT4G19120.3 39.706 476 265 6 55 518 34 499 6.69e-119 363
Msa1366330 AT1G78240.1 35.165 546 318 10 89 611 144 676 5.91e-117 364
Msa1366330 AT1G78240.2 35.165 546 318 10 89 611 144 676 5.91e-117 364
Msa1366330 AT1G13860.4 34.229 558 298 12 89 613 79 600 1.62e-109 342
Msa1366330 AT1G13860.3 34.229 558 298 12 89 613 79 600 1.62e-109 342
Msa1366330 AT1G13860.1 34.229 558 298 12 89 613 79 600 1.62e-109 342
Msa1366330 AT1G13860.5 34.229 558 298 12 89 613 79 600 1.62e-109 342
Msa1366330 AT1G26850.3 38.867 512 266 13 4 496 10 493 1.86e-109 339
Msa1366330 AT1G19430.1 37.453 534 294 13 90 614 220 722 7.82e-106 336
Msa1366330 AT1G19430.3 37.453 534 294 13 90 614 220 722 7.82e-106 336
Msa1366330 AT2G03480.2 35.821 536 280 12 89 597 84 582 1.57e-104 329
Msa1366330 AT2G03480.1 34.791 549 301 13 89 611 84 601 8.14e-99 314
Msa1366330 AT1G13860.2 35.914 465 247 10 179 613 1 444 1.39e-95 301
Msa1366330 AT1G19430.2 34.250 400 230 11 90 480 220 595 3.57e-61 214
Msa1366330 AT2G03480.3 33.333 285 175 4 89 364 84 362 4.03e-55 193

Find 182 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCTGATTTGAATTAT+TGG 0.158327 tig0018446:-200365 Msa1366330:five_prime_UTR
GAAACTCGGGTCATCATATT+TGG 0.159182 tig0018446:-200070 Msa1366330:CDS
CCTCCTAGATTAGCTGATTT+TGG 0.165968 tig0018446:-197002 Msa1366330:CDS
TCAAGTTATTATTAAGAAAT+AGG 0.196879 tig0018446:-195780 Msa1366330:three_prime_UTR
CTATCAACTGCGGATGAAAT+TGG 0.231856 tig0018446:-199471 Msa1366330:CDS
ATGAATCTTCATCAAGTTTC+GGG 0.251904 tig0018446:-200017 Msa1366330:CDS
CGATACAATAAGGAATATTA+TGG 0.266438 tig0018446:-196752 Msa1366330:CDS
TTGTACTATTCTGTTTAGTA+TGG 0.274573 tig0018446:-195569 Msa1366330:three_prime_UTR
TGCGACGTTCAGTTGGGTTT+TGG 0.276747 tig0018446:-200339 Msa1366330:five_prime_UTR
AACCGACAGTGTGAAATTTA+AGG 0.283990 tig0018446:+201426 None:intergenic
AGATCCAAATTCCGATTAAA+AGG 0.289018 tig0018446:+200278 None:intergenic
AAATAGGCATCACGCTTTAT+AGG 0.297432 tig0018446:-195764 Msa1366330:three_prime_UTR
TTCCTCTTTCGAGGGCAAAT+TGG 0.300813 tig0018446:+197833 None:intergenic
TAGAATATGGCAAATCATTA+AGG 0.302605 tig0018446:-200092 Msa1366330:CDS
AGACTTACAGGGAAACTCTT+TGG 0.313437 tig0018446:+199967 None:intergenic
TCATCCTGAGCATATGCTTC+TGG 0.327211 tig0018446:+197640 None:intergenic
ATCTTGTGGTACAGGAACTA+TGG 0.329209 tig0018446:-196825 Msa1366330:intron
GGTTCATCTGCTCTAGAATA+TGG 0.329914 tig0018446:-200105 Msa1366330:CDS
ATGAAGAGAATCTAAGGATA+TGG 0.338817 tig0018446:-197621 Msa1366330:CDS
GGCTAACTAGTGGAAGCTTC+AGG 0.341074 tig0018446:-195985 Msa1366330:CDS
GGCTGTGGTGTTGCAAGTTT+CGG 0.342008 tig0018446:-197925 Msa1366330:CDS
GATGAATCTTCATCAAGTTT+CGG 0.344747 tig0018446:-200018 Msa1366330:CDS
TTCGGGTTCTGACTCTGTTC+AGG 0.348361 tig0018446:-196047 Msa1366330:CDS
AGCAGTTGCAACCGCAGATT+CGG 0.348674 tig0018446:-196065 Msa1366330:CDS
AAAGCTAACATGGGTTCATT+TGG 0.352385 tig0018446:-196724 Msa1366330:CDS
AAATCAAATCCGATACAATA+AGG 0.353127 tig0018446:-196762 Msa1366330:CDS
GTGTATGGTGGATCCATCTT+TGG 0.355339 tig0018446:-200141 Msa1366330:CDS
AAAAGAACCAAACTGTTATC+TGG 0.362259 tig0018446:-197549 Msa1366330:CDS
TATATAACTTTAAGTGTGTT+TGG 0.364555 tig0018446:+196646 None:intergenic
TGCCCTCGAAAGAGGAATTC+CGG 0.372896 tig0018446:-197827 Msa1366330:CDS
ATTGGTTTATTGTATGTGTA+TGG 0.380007 tig0018446:-200156 Msa1366330:CDS
CTCAGGATGAAGAGAATCTA+AGG 0.380827 tig0018446:-197627 Msa1366330:CDS
GGAGGACTGGTCAATCTTGC+AGG 0.386413 tig0018446:+197023 None:intergenic
CAGATTTGGCTCTGAATGTC+TGG 0.392842 tig0018446:-200312 Msa1366330:five_prime_UTR
GGTTTAGCTTAGAATCCAAT+TGG 0.393722 tig0018446:+201269 None:intergenic
GTTCTCGTTGTCGAATTGAT+TGG 0.395510 tig0018446:-197738 Msa1366330:CDS
CTCTTAAAGACAAGGATGTA+TGG 0.398577 tig0018446:-196696 Msa1366330:CDS
CCGGCATATCTTGGTGTGTT+GGG 0.409827 tig0018446:-197808 Msa1366330:CDS
ATCTCAATCAATAGATCCTC+TGG 0.411086 tig0018446:+196184 None:intergenic
GGTGAAAAGATAGCGTTTCC+TGG 0.413514 tig0018446:-198855 Msa1366330:CDS
CAGAACTGGATGGTTGAAAA+AGG 0.415347 tig0018446:-198876 Msa1366330:CDS
GAGAGAGAGTTGATAAATAC+TGG 0.416336 tig0018446:-196801 Msa1366330:CDS
ATCACGGAAGATTACAAAAC+CGG 0.418144 tig0018446:+196141 None:intergenic
CATAATATTCCTTATTGTAT+CGG 0.419784 tig0018446:+196753 None:intergenic
GCAGTTGCAACCGCAGATTC+GGG 0.422319 tig0018446:-196064 Msa1366330:CDS
TTCTTCACGAAATCAATCAT+TGG 0.425949 tig0018446:+196112 None:intergenic
AGCTTTACCTTGTATCCTGC+TGG 0.439990 tig0018446:+199374 None:intergenic
AAATTGAACTCACAACTTTG+CGG 0.442299 tig0018446:-201606 Msa1366330:five_prime_UTR
TTGCTTACTGCTTCACCACT+TGG 0.443831 tig0018446:+195867 None:intergenic
TAGCCAAAATCAGCTAATCT+AGG 0.446639 tig0018446:+196999 None:intergenic
ACCTTGTATCCTGCTGGAGG+TGG 0.447322 tig0018446:+199380 None:intergenic
ATCAAGTTTCGGGCAGGTTG+AGG 0.449725 tig0018446:-200007 Msa1366330:CDS
TACTACTTCTTGAACTAGAC+CGG 0.450201 tig0018446:-197699 Msa1366330:CDS
TGATAAGTACATTGCATCAA+TGG 0.450486 tig0018446:-198805 Msa1366330:CDS
AGAGGAATTCCGGCATATCT+TGG 0.451720 tig0018446:-197817 Msa1366330:CDS
TTGAACTAGACCGGGTTCTC+AGG 0.456403 tig0018446:-197690 Msa1366330:CDS
TTGGTGTTGCGACGTTCAGT+TGG 0.457036 tig0018446:-200346 Msa1366330:five_prime_UTR
TCAAAAGATCTGCTTGGGTA+TGG 0.460861 tig0018446:+197772 None:intergenic
ATATATGACAGAGGCCTCAT+AGG 0.461279 tig0018446:-196628 Msa1366330:CDS
AAGATAGCGTTTCCTGGAGG+TGG 0.467053 tig0018446:-198849 Msa1366330:CDS
AAACTCGGGTCATCATATTT+GGG 0.469992 tig0018446:-200069 Msa1366330:CDS
TTCAAATGAAATGTTCGAAA+AGG 0.471325 tig0018446:-196976 Msa1366330:CDS
CATAGAGGAGGGCGAGTACC+AGG 0.471766 tig0018446:+197487 None:intergenic
CAATTGTAGCGCCTTTCTGC+AGG 0.474236 tig0018446:+199410 None:intergenic
AACCTCCTGGCCTGAGAACC+CGG 0.474438 tig0018446:+197680 None:intergenic
GAGTACTCACGTTCACTGTA+AGG 0.479937 tig0018446:+197406 None:intergenic
CAAGTTCAAAAGATCTGCTT+GGG 0.481909 tig0018446:+197767 None:intergenic
CATCAGGATCTGCGTCAGAC+TGG 0.485907 tig0018446:+197464 None:intergenic
AACAATAATCTAAACAATGA+AGG 0.490397 tig0018446:-197973 Msa1366330:CDS
AGTACTTAACTGCTTTGCAC+TGG 0.490999 tig0018446:-196090 Msa1366330:CDS
GGTTTATTGTATGTGTATGG+TGG 0.491063 tig0018446:-200153 Msa1366330:CDS
GCGATTCCACTTGGAGAAAG+TGG 0.491205 tig0018446:+201774 None:intergenic
ATCCAATTTGCCCTCGAAAG+AGG 0.492639 tig0018446:-197835 Msa1366330:CDS
CTGGTCAATCTTGCAGGCCA+TGG 0.493398 tig0018446:+197029 None:intergenic
GGTTTGTGATGATCGACATT+CGG 0.499002 tig0018446:-199525 Msa1366330:CDS
ATTGATTGGCTTCAGAGAGA+TGG 0.500213 tig0018446:-197724 Msa1366330:CDS
CACCTTAAATTTCACACTGT+CGG 0.500946 tig0018446:-201428 Msa1366330:five_prime_UTR
TTTCGGGCAGGTTGAGGAGG+AGG 0.501923 tig0018446:-200001 Msa1366330:CDS
ATGCCGGAATTCCTCTTTCG+AGG 0.502230 tig0018446:+197824 None:intergenic
TGATATCATTACAATGTCCT+TGG 0.502493 tig0018446:-197884 Msa1366330:CDS
GGCAAATCATTAAGGAAACT+CGG 0.503496 tig0018446:-200084 Msa1366330:CDS
TGGTGTTGCGACGTTCAGTT+GGG 0.506408 tig0018446:-200345 Msa1366330:five_prime_UTR
TCATCCGCAGTTGATAGATA+AGG 0.506793 tig0018446:+199477 None:intergenic
TTTACCACCGCGATTCCACT+TGG 0.514346 tig0018446:+201765 None:intergenic
TCATAGGCGCCACTCATGAC+TGG 0.514718 tig0018446:-196612 Msa1366330:intron
TGCTTCCATCTGTGTTGCGA+CGG 0.516462 tig0018446:-200184 Msa1366330:CDS
ATGCACATCATTTGGTGCCA+AGG 0.517710 tig0018446:+197867 None:intergenic
ATCTTTGGTTCTCAAAGTAG+TGG 0.519421 tig0018446:-200126 Msa1366330:CDS
AGCTAATCTAGGAGGAGGAC+TGG 0.521950 tig0018446:+197010 None:intergenic
AGTCATGAGTGGCGCCTATG+AGG 0.523143 tig0018446:+196614 None:intergenic
TGAAAATGAGTCCCACCTCC+AGG 0.523764 tig0018446:+198837 None:intergenic
GCTAACTAGTGGAAGCTTCA+GGG 0.524448 tig0018446:-195984 Msa1366330:CDS
TCCGGCATATCTTGGTGTGT+TGG 0.527386 tig0018446:-197809 Msa1366330:CDS
TGCTTGATTCCACCTCCAGC+AGG 0.528228 tig0018446:-199389 Msa1366330:CDS
CGATTCCACTTGGAGAAAGT+GGG 0.528474 tig0018446:+201775 None:intergenic
TCAGATGACAACAAAGCTAA+AGG 0.530234 tig0018446:-197065 Msa1366330:intron
ATTATCTGCTATTGCTGCAA+GGG 0.531979 tig0018446:-195903 Msa1366330:three_prime_UTR
TCCACCTCCAGCAGGATACA+AGG 0.532112 tig0018446:-199381 Msa1366330:intron
ATCTTCATCAAGTTTCGGGC+AGG 0.532250 tig0018446:-200013 Msa1366330:CDS
CAATCATTGGCTGTTTATCA+CGG 0.533993 tig0018446:+196125 None:intergenic
TATTGCAGGTCCCTGTTAAG+TGG 0.534088 tig0018446:-198968 Msa1366330:intron
GTTTAGCTTAGAATCCAATT+GGG 0.535911 tig0018446:+201270 None:intergenic
AAGAAATTGTGGCTAACTAG+TGG 0.541752 tig0018446:-195995 Msa1366330:CDS
CTAGACCGGGTTCTCAGGCC+AGG 0.542143 tig0018446:-197685 Msa1366330:CDS
GCAAGTTCAAAAGATCTGCT+TGG 0.542505 tig0018446:+197766 None:intergenic
GACAACAAAGCTAAAGGTAG+TGG 0.545840 tig0018446:-197059 Msa1366330:CDS
TATGGATATGAAAGCTAACA+TGG 0.546843 tig0018446:-196734 Msa1366330:CDS
AGAGGATCTATTGATTGAGA+TGG 0.548428 tig0018446:-196182 Msa1366330:CDS
ACTACTTTGAGAACCAAAGA+TGG 0.550404 tig0018446:+200128 None:intergenic
TGCCGGAATTCCTCTTTCGA+GGG 0.551478 tig0018446:+197825 None:intergenic
GTCTCCAGAAGCATATGCTC+AGG 0.552689 tig0018446:-197644 Msa1366330:CDS
AAGGTAGTGGCTTAGCTCCA+TGG 0.554029 tig0018446:-197046 Msa1366330:CDS
CATGTGCAAGGTGAGTATGC+GGG 0.554830 tig0018446:+198910 None:intergenic
GTACTTAACTGCTTTGCACT+GGG 0.555902 tig0018446:-196089 Msa1366330:CDS
CCCAACACACCAAGATATGC+CGG 0.557514 tig0018446:+197808 None:intergenic
TCTTAAAGACAAGGATGTAT+GGG 0.561592 tig0018446:-196695 Msa1366330:CDS
TGCTTACTGCTTCACCACTT+GGG 0.563853 tig0018446:+195868 None:intergenic
TATTATCTGCTATTGCTGCA+AGG 0.565473 tig0018446:-195904 Msa1366330:three_prime_UTR
AGTGTGTTTGGTCCATCTTG+AGG 0.566835 tig0018446:+196658 None:intergenic
GACATTGTCCTCCTGCAGAA+AGG 0.568006 tig0018446:-199421 Msa1366330:CDS
CTTACATAATACCCAAATGC+AGG 0.569944 tig0018446:+195723 None:intergenic
TTATAGCAATCATTTGTCAA+AGG 0.570240 tig0018446:+197520 None:intergenic
CGGGTCATCATATTTGGGTG+CGG 0.570443 tig0018446:-200064 Msa1366330:CDS
TTATCATACAGAAGAAATTG+TGG 0.573042 tig0018446:-196006 Msa1366330:CDS
CTTACGACTTACTCCATGCA+TGG 0.577084 tig0018446:-196243 Msa1366330:CDS
GCAAATCATTAAGGAAACTC+GGG 0.578611 tig0018446:-200083 Msa1366330:CDS
GAAAGAAATGAGTGATCTTG+TGG 0.587132 tig0018446:-197599 Msa1366330:CDS
TGTGGTGTTGCAAGTTTCGG+AGG 0.588854 tig0018446:-197922 Msa1366330:CDS
GAAATTGGACTTGTCTGTGA+TGG 0.590350 tig0018446:-199456 Msa1366330:CDS
TTGCGGACAGTGCTTGATGT+TGG 0.592875 tig0018446:-197946 Msa1366330:CDS
ACTACTTCTTGAACTAGACC+GGG 0.593228 tig0018446:-197698 Msa1366330:CDS
TTTACCTTGTATCCTGCTGG+AGG 0.594171 tig0018446:+199377 None:intergenic
ATGAATGTTGTACCTCAAGA+TGG 0.595874 tig0018446:-196670 Msa1366330:CDS
TAATGATATCAGATGCAAGA+AGG 0.596202 tig0018446:+197896 None:intergenic
CAGACAAGACAGTCCATGCA+TGG 0.597709 tig0018446:+196230 None:intergenic
AAAGAAATGAGTGATCTTGT+GGG 0.597795 tig0018446:-197598 Msa1366330:CDS
AAGTTTCGGGCAGGTTGAGG+AGG 0.598476 tig0018446:-200004 Msa1366330:CDS
GCGTCAGACTGGCATAGAGG+AGG 0.600761 tig0018446:+197475 None:intergenic
TCATGTGCAAGGTGAGTATG+CGG 0.601983 tig0018446:+198909 None:intergenic
ATCTTGTGGGGCGTATGTGT+TGG 0.603803 tig0018446:-197585 Msa1366330:CDS
TCTGCGTCAGACTGGCATAG+AGG 0.604282 tig0018446:+197472 None:intergenic
TTGTAGCGCCTTTCTGCAGG+AGG 0.605032 tig0018446:+199413 None:intergenic
AAGCATTCTCAACATACCCT+CGG 0.607953 tig0018446:-196267 Msa1366330:CDS
AAATCAGCTAATCTAGGAGG+AGG 0.608894 tig0018446:+197005 None:intergenic
ACAGTGCTTGATGTTGGCTG+TGG 0.609589 tig0018446:-197940 Msa1366330:CDS
CGTCAGACTGGCATAGAGGA+GGG 0.612841 tig0018446:+197476 None:intergenic
GAGTATGCGAAATAACCTCC+TGG 0.612850 tig0018446:+197667 None:intergenic
GTGGTGTTGCAAGTTTCGGA+GGG 0.613327 tig0018446:-197921 Msa1366330:CDS
AGATAGCGTTTCCTGGAGGT+GGG 0.614943 tig0018446:-198848 Msa1366330:CDS
GACCGCGTGCTTAGACCTAC+CGG 0.616375 tig0018446:-196160 Msa1366330:CDS
AGTCAGTGTATTGTATTGTG+AGG 0.617658 tig0018446:-200395 Msa1366330:five_prime_UTR
TGGAGCTGCTCTTAAAGACA+AGG 0.618325 tig0018446:-196704 Msa1366330:CDS
ATAAGGTGTCTATCTAAGCA+AGG 0.619479 tig0018446:+199494 None:intergenic
TTTCAGCTAATAAATGTCGA+GGG 0.621039 tig0018446:-200241 Msa1366330:exon
TGGAGTAAGTCGTAAGTCCG+AGG 0.621892 tig0018446:+196250 None:intergenic
ATAACTAAAATACAAACACT+TGG 0.622410 tig0018446:-201370 Msa1366330:five_prime_UTR
CTAGTTCAATAATCAAGACA+TGG 0.624276 tig0018446:-195700 Msa1366330:three_prime_UTR
GTTTCAGCTAATAAATGTCG+AGG 0.624315 tig0018446:-200242 Msa1366330:exon
GCAAACCCACTTTCTCCAAG+TGG 0.629272 tig0018446:-201780 Msa1366330:five_prime_UTR
GAAGAAAGATTGCAGTCCAG+AGG 0.639031 tig0018446:-196200 Msa1366330:CDS
GGTGCGGATGATGACAATGA+TGG 0.639680 tig0018446:-200048 Msa1366330:CDS
CCAAAATCAGCTAATCTAGG+AGG 0.640226 tig0018446:+197002 None:intergenic
TTCAGCTAATAAATGTCGAG+GGG 0.645373 tig0018446:-200240 Msa1366330:exon
AGAGTCAGAACCCGAATCTG+CGG 0.645931 tig0018446:+196054 None:intergenic
ACTTTCTCCAAGTGGAATCG+CGG 0.650721 tig0018446:-201772 Msa1366330:five_prime_UTR
GGAGTAAGTCGTAAGTCCGA+GGG 0.656206 tig0018446:+196251 None:intergenic
TAAACAATGAAGGAAGATTG+CGG 0.666101 tig0018446:-197963 Msa1366330:CDS
CGACAGTGTGAAATTTAAGG+TGG 0.666495 tig0018446:+201429 None:intergenic
TGAAATGTTCGAAAAGGACA+CGG 0.667841 tig0018446:-196970 Msa1366330:intron
AAAATCTGACCAGAACTGGA+TGG 0.669903 tig0018446:-198886 Msa1366330:CDS
CGGAAGATTACAAAACCGGT+AGG 0.669981 tig0018446:+196145 None:intergenic
GATTCAATACCAGTCATGAG+TGG 0.672442 tig0018446:+196603 None:intergenic
TTCTCCAAGTGGAATCGCGG+TGG 0.673024 tig0018446:-201769 Msa1366330:intron
GACCGGGTTCTCAGGCCAGG+AGG 0.684761 tig0018446:-197682 Msa1366330:CDS
ATGGATATGAAAGCTAACAT+GGG 0.699127 tig0018446:-196733 Msa1366330:CDS
AACCGGTAGGTCTAAGCACG+CGG 0.699582 tig0018446:+196158 None:intergenic
CTTAAAGTTATATATGACAG+AGG 0.704000 tig0018446:-196637 Msa1366330:CDS
GGATCAAAGCACTTCCCAAG+TGG 0.704431 tig0018446:-195882 Msa1366330:three_prime_UTR
GACACCTTATCTATCAACTG+CGG 0.711012 tig0018446:-199481 Msa1366330:CDS
TCAGCTAATAAATGTCGAGG+GGG 0.718230 tig0018446:-200239 Msa1366330:exon
AAGAAATGAGTGATCTTGTG+GGG 0.720429 tig0018446:-197597 Msa1366330:CDS
GAAAAGATAGCGTTTCCTGG+AGG 0.737306 tig0018446:-198852 Msa1366330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAAAATGTAAAAATAATT+CGG + tig0018446:195672-195691 None:intergenic 10.0%
!! AAATTAAAATCATTAATAAG+AGG + tig0018446:200402-200421 None:intergenic 10.0%
!!! TTTTTTTTAGTTTGTTTTAG+TGG - tig0018446:196159-196178 Msa1366330:CDS 15.0%
!!! TGATTATAACTTGTTATTAA+TGG - tig0018446:196274-196293 Msa1366330:CDS 15.0%
!!! ATAAATCATGTTTCTTTTTA+TGG - tig0018446:196486-196505 Msa1366330:intron 15.0%
!!! TAAATCATGTTTCTTTTTAT+GGG - tig0018446:196487-196506 Msa1366330:intron 15.0%
!! AAAAAGTTTAAACTAAGATA+AGG + tig0018446:196811-196830 None:intergenic 15.0%
!!! ATAATTCTGATTTGAATTAT+TGG - tig0018446:196960-196979 Msa1366330:intron 15.0%
!! TGCTTAAAATTAAATGTAAA+TGG - tig0018446:197566-197585 Msa1366330:CDS 15.0%
!! AAAAATGAAATAGTGATAAA+AGG + tig0018446:198880-198899 None:intergenic 15.0%
!!! TTTATCACTATTTCATTTTT+TGG - tig0018446:198880-198899 Msa1366330:CDS 15.0%
!!! TAATTAAAGATTCTTTTTAG+AGG - tig0018446:200167-200186 Msa1366330:CDS 15.0%
!! TAAAAAAAATGAAAATGCAA+TGG + tig0018446:201398-201417 None:intergenic 15.0%
!! TCAAGTTATTATTAAGAAAT+AGG - tig0018446:201545-201564 Msa1366330:intron 15.0%
!! ATAACTAAAATACAAACACT+TGG - tig0018446:195955-195974 Msa1366330:exon 20.0%
!!! TATTGTTTTGCATTGTTTTT+TGG - tig0018446:196101-196120 Msa1366330:CDS 20.0%
!!! ATTGTTTTGCATTGTTTTTT+GGG - tig0018446:196102-196121 Msa1366330:CDS 20.0%
!! TTTATTGTTAACATGATTCA+TGG - tig0018446:196379-196398 Msa1366330:intron 20.0%
!! ATAATTCAGGAAATCAAAAT+TGG + tig0018446:196428-196447 None:intergenic 20.0%
!!! AAATCATGTTTCTTTTTATG+GGG - tig0018446:196488-196507 Msa1366330:intron 20.0%
!!! AAGTTTTTAACCAAATACTT+TGG + tig0018446:196637-196656 None:intergenic 20.0%
!!! CTATTTTTGCTTTTGATATT+TGG - tig0018446:197413-197432 Msa1366330:intron 20.0%
!!! TATAATGTTTCTTCTTTTGA+AGG - tig0018446:197779-197798 Msa1366330:CDS 20.0%
!! AAGATTAAAAATTGATCCAA+GGG + tig0018446:198047-198066 None:intergenic 20.0%
!! TAAGATTAAAAATTGATCCA+AGG + tig0018446:198048-198067 None:intergenic 20.0%
!! TTGTTAGAATAAATAGAAGT+TGG - tig0018446:198165-198184 Msa1366330:intron 20.0%
!! AAATAATACATATGTATCAG+AGG + tig0018446:198311-198330 None:intergenic 20.0%
!!! TATGTATTATTTTGAACTTC+TGG + tig0018446:198706-198725 None:intergenic 20.0%
!!! TTCTGTTTTTAGTACATTAA+CGG - tig0018446:198726-198745 Msa1366330:intron 20.0%
!! AATAGTGATAAAAGGAAAAA+GGG + tig0018446:198872-198891 None:intergenic 20.0%
!! AAATAGTGATAAAAGGAAAA+AGG + tig0018446:198873-198892 None:intergenic 20.0%
!!! TTTTATGTATTCTGTTTATC+TGG - tig0018446:199250-199269 Msa1366330:intron 20.0%
!! AACAATAATCTAAACAATGA+AGG - tig0018446:199352-199371 Msa1366330:intron 20.0%
!!! TTTCTCTATAATTTCCTTTT+AGG - tig0018446:199999-200018 Msa1366330:CDS 20.0%
!! TATGTATTCTATGATTTCTA+TGG - tig0018446:200038-200057 Msa1366330:CDS 20.0%
!!! GCTTGTTATTTATAACATAA+AGG + tig0018446:200198-200217 None:intergenic 20.0%
!! CATAATATTCCTTATTGTAT+CGG + tig0018446:200575-200594 None:intergenic 20.0%
!! TATATAACTTTAAGTGTGTT+TGG + tig0018446:200682-200701 None:intergenic 20.0%
!!! AACTTCTAATTTTAGTAAAC+AGG + tig0018446:200747-200766 None:intergenic 20.0%
!! TATAAAATGTTGTCAAATAG+CGG + tig0018446:200866-200885 None:intergenic 20.0%
! AATTAGAGAAAAAGCTTACT+GGG + tig0018446:196080-196099 None:intergenic 25.0%
!!! ATTGTTTTTTGGGATTGTAA+TGG - tig0018446:196112-196131 Msa1366330:CDS 25.0%
!!! ATCTGAAACATTTTACTATG+TGG - tig0018446:196135-196154 Msa1366330:CDS 25.0%
! CCTTAGCAAAAATATAATTC+AGG + tig0018446:196441-196460 None:intergenic 25.0%
!!! CCTGAATTATATTTTTGCTA+AGG - tig0018446:196438-196457 Msa1366330:intron 25.0%
! TAAAAACCAAGTCAAAATGA+TGG + tig0018446:196529-196548 None:intergenic 25.0%
! TTGGATAAAGAAGTTTGAAT+TGG - tig0018446:196764-196783 Msa1366330:CDS 25.0%
!!! TTTGAATTGGTCTCTTTTTT+TGG - tig0018446:196777-196796 Msa1366330:CDS 25.0%
! GAAACAATAATCAGCAAATT+CGG + tig0018446:196884-196903 None:intergenic 25.0%
! TAATGATTAACCTGCAATTA+AGG + tig0018446:196910-196929 None:intergenic 25.0%
!! ATTGGTTTATTGTATGTGTA+TGG - tig0018446:197169-197188 Msa1366330:intron 25.0%
! TAGAATATGGCAAATCATTA+AGG - tig0018446:197233-197252 Msa1366330:intron 25.0%
! TATCAAAAGCAAAAATAGAG+TGG + tig0018446:197411-197430 None:intergenic 25.0%
!! ACTGATTTAGTTACTATATG+TGG + tig0018446:197626-197645 None:intergenic 25.0%
! ATTGTTTCCTGTATAATAAG+TGG - tig0018446:197683-197702 Msa1366330:CDS 25.0%
! AGATTAAAAATTGATCCAAG+GGG + tig0018446:198046-198065 None:intergenic 25.0%
! GAAATATGTAAACTAATCCT+AGG + tig0018446:198089-198108 None:intergenic 25.0%
! GTTCCTATTTATTCAAGATT+AGG - tig0018446:198138-198157 Msa1366330:intron 25.0%
! ACTCCTAATCTTGAATAAAT+AGG + tig0018446:198144-198163 None:intergenic 25.0%
!!! AGTTATGGGTTTTAGTTAAA+AGG + tig0018446:198263-198282 None:intergenic 25.0%
!! ATCACATTTGTTGAAGTTAT+GGG + tig0018446:198277-198296 None:intergenic 25.0%
!! AATCACATTTGTTGAAGTTA+TGG + tig0018446:198278-198297 None:intergenic 25.0%
!!! ACATTTTCATTTGAAGTAGA+AGG + tig0018446:198653-198672 None:intergenic 25.0%
!! AGTTTTCCATTTTCATTTGA+TGG - tig0018446:198679-198698 Msa1366330:intron 25.0%
! TATATTATGCTACTAAGGTA+TGG + tig0018446:199032-199051 None:intergenic 25.0%
! ATGTCTAGTAATTATGAATC+AGG + tig0018446:199055-199074 None:intergenic 25.0%
! TTATAGCAATCATTTGTCAA+AGG + tig0018446:199808-199827 None:intergenic 25.0%
!! TTTTGTATTCTATTGCTCAT+AGG - tig0018446:199968-199987 Msa1366330:intron 25.0%
! TTTGTATTCTATTGCTCATA+GGG - tig0018446:199969-199988 Msa1366330:intron 25.0%
! TAATAAATCTTTAGCCAGAA+TGG + tig0018446:200065-200084 None:intergenic 25.0%
! GCTAAAGATTTATTATCCTT+TGG - tig0018446:200070-200089 Msa1366330:CDS 25.0%
! CATTTAATACTCAATTCTCA+GGG + tig0018446:200137-200156 None:intergenic 25.0%
! TTGCATACTGAAATTTATGT+TGG - tig0018446:200231-200250 Msa1366330:CDS 25.0%
! TTCAAATGAAATGTTCGAAA+AGG - tig0018446:200349-200368 Msa1366330:five_prime_UTR 25.0%
! AAATCAAATCCGATACAATA+AGG - tig0018446:200563-200582 Msa1366330:intron 25.0%
! CGATACAATAAGGAATATTA+TGG - tig0018446:200573-200592 Msa1366330:intron 25.0%
! CTTAAAGTTATATATGACAG+AGG - tig0018446:200688-200707 Msa1366330:intron 25.0%
!! TGATTTGCAATTGACAATAT+TGG + tig0018446:200788-200807 None:intergenic 25.0%
! TTATCATACAGAAGAAATTG+TGG - tig0018446:201319-201338 Msa1366330:five_prime_UTR 25.0%
! CAAAAATGAGAATCAAAAGA+AGG + tig0018446:201515-201534 None:intergenic 25.0%
!!! TCTTTTGATTCTCATTTTTG+AGG - tig0018446:201515-201534 Msa1366330:intron 25.0%
! TTGTACTATTCTGTTTAGTA+TGG - tig0018446:201756-201775 Msa1366330:intron 25.0%
!!! ATTACTTTTTTTCCTCGAGA+CGG - tig0018446:195596-195615 Msa1366330:three_prime_UTR 30.0%
AAATTGAACTCACAACTTTG+CGG - tig0018446:195719-195738 Msa1366330:three_prime_UTR 30.0%
! GATTAAGGTAGCAACTTTTA+TGG + tig0018446:195817-195836 None:intergenic 30.0%
!! TTGTTTTTCTTTGACCCAAT+TGG - tig0018446:196041-196060 Msa1366330:CDS 30.0%
! GTTTAGCTTAGAATCCAATT+GGG + tig0018446:196058-196077 None:intergenic 30.0%
GAATTAGAGAAAAAGCTTAC+TGG + tig0018446:196081-196100 None:intergenic 30.0%
! GTTCTTGTTGTGAATTATGA+TGG - tig0018446:196181-196200 Msa1366330:CDS 30.0%
CATTCAATTCAATACATCAG+TGG + tig0018446:196213-196232 None:intergenic 30.0%
! AACAACACTAGCATTGAAAA+AGG + tig0018446:196306-196325 None:intergenic 30.0%
! GGTAGTTCTGTTTAATTGTA+TGG - tig0018446:196344-196363 Msa1366330:intron 30.0%
GAAATCAAAATTGGCAATTG+AGG + tig0018446:196419-196438 None:intergenic 30.0%
! TTTCTTTTTATGGGGTGATT+TGG - tig0018446:196496-196515 Msa1366330:intron 30.0%
! TTGTATTATTTTCCCTCCTA+TGG - tig0018446:196601-196620 Msa1366330:intron 30.0%
GAAATGAATGAAGAATCTTG+TGG - tig0018446:196657-196676 Msa1366330:CDS 30.0%
AATGACTTTAGTTACACTCT+AGG - tig0018446:196713-196732 Msa1366330:CDS 30.0%
CTTCTTTATCCAATGCAAAT+TGG + tig0018446:196757-196776 None:intergenic 30.0%
AACGTTTAATAAAGATCTGC+AGG - tig0018446:196840-196859 Msa1366330:intron 30.0%
! TCAAGCAAGATCCTTTTAAT+CGG - tig0018446:197036-197055 Msa1366330:CDS 30.0%
! AGATCCTTTTAATCGGAATT+TGG - tig0018446:197043-197062 Msa1366330:CDS 30.0%
AGATCCAAATTCCGATTAAA+AGG + tig0018446:197050-197069 None:intergenic 30.0%
TTTCAGCTAATAAATGTCGA+GGG - tig0018446:197084-197103 Msa1366330:intron 30.0%
GATGAATCTTCATCAAGTTT+CGG - tig0018446:197307-197326 Msa1366330:intron 30.0%
ATGAATCTTCATCAAGTTTC+GGG - tig0018446:197308-197327 Msa1366330:intron 30.0%
ATCTTACAAAGAGACTTACA+GGG + tig0018446:197372-197391 None:intergenic 30.0%
AATCTTACAAAGAGACTTAC+AGG + tig0018446:197373-197392 None:intergenic 30.0%
!!! GTAGAGTTTTGTTCAATTTC+AGG - tig0018446:197479-197498 Msa1366330:CDS 30.0%
! TTCAGATGCAGCAATATTTT+TGG - tig0018446:197730-197749 Msa1366330:CDS 30.0%
!!! TATGGGTTTTAGTTAAAAGG+AGG + tig0018446:198260-198279 None:intergenic 30.0%
TGATAAGTACATTGCATCAA+TGG - tig0018446:198520-198539 Msa1366330:intron 30.0%
ATGTCTGAAAACATTCTCAA+GGG + tig0018446:198581-198600 None:intergenic 30.0%
! TTGAGAATGTTTTCAGACAT+GGG - tig0018446:198581-198600 Msa1366330:intron 30.0%
TGAAGTAGAAGGAATATGTA+CGG + tig0018446:198642-198661 None:intergenic 30.0%
TACAGTGGCGATAAAATATA+AGG + tig0018446:198823-198842 None:intergenic 30.0%
AAATGACATAGTTAGATGTG+AGG + tig0018446:198921-198940 None:intergenic 30.0%
TCAGGTATATTATGCTACTA+AGG + tig0018446:199037-199056 None:intergenic 30.0%
TATGAACAAGCAAAATGCAT+AGG + tig0018446:199106-199125 None:intergenic 30.0%
GAGTCATTATCATATCATGT+TGG - tig0018446:199214-199233 Msa1366330:intron 30.0%
TAAACAATGAAGGAAGATTG+CGG - tig0018446:199362-199381 Msa1366330:intron 30.0%
TAATGATATCAGATGCAAGA+AGG + tig0018446:199432-199451 None:intergenic 30.0%
TGATATCATTACAATGTCCT+TGG - tig0018446:199441-199460 Msa1366330:CDS 30.0%
!! TGATTTTGATGCACATCATT+TGG + tig0018446:199469-199488 None:intergenic 30.0%
ATGAAGAGAATCTAAGGATA+TGG - tig0018446:199704-199723 Msa1366330:intron 30.0%
AAAGAAATGAGTGATCTTGT+GGG - tig0018446:199727-199746 Msa1366330:intron 30.0%
AAAAGAACCAAACTGTTATC+TGG - tig0018446:199776-199795 Msa1366330:intron 30.0%
TGCTATAAAAAAAGAGAACC+TGG - tig0018446:199820-199839 Msa1366330:intron 30.0%
!!! TGCAGTTTTTGGAGTAAATA+TGG - tig0018446:199882-199901 Msa1366330:intron 30.0%
TTGTATTCTATTGCTCATAG+GGG - tig0018446:199970-199989 Msa1366330:intron 30.0%
CATTGACAGATAAACCTAAA+AGG + tig0018446:200016-200035 None:intergenic 30.0%
CCATTTAATACTCAATTCTC+AGG + tig0018446:200138-200157 None:intergenic 30.0%
CCTGAGAATTGAGTATTAAA+TGG - tig0018446:200135-200154 Msa1366330:CDS 30.0%
AGTATGCAAGTTTCAAATCA+CGG + tig0018446:200220-200239 None:intergenic 30.0%
ATAAAATGTAAGCCAACAGT+TGG + tig0018446:200482-200501 None:intergenic 30.0%
! TTGGCTTACATTTTATCTTG+TGG - tig0018446:200486-200505 Msa1366330:intron 30.0%
! TACATTTTATCTTGTGGTAC+AGG - tig0018446:200492-200511 Msa1366330:intron 30.0%
TATGGATATGAAAGCTAACA+TGG - tig0018446:200591-200610 Msa1366330:intron 30.0%
ATGGATATGAAAGCTAACAT+GGG - tig0018446:200592-200611 Msa1366330:intron 30.0%
TCTTAAAGACAAGGATGTAT+GGG - tig0018446:200630-200649 Msa1366330:intron 30.0%
TGCAATTGACAATATTGGAA+TGG + tig0018446:200783-200802 None:intergenic 30.0%
TTCTTCACGAAATCAATCAT+TGG + tig0018446:201216-201235 None:intergenic 30.0%
CTAGTTCAATAATCAAGACA+TGG - tig0018446:201625-201644 Msa1366330:five_prime_UTR 30.0%
AAAGTTGCTACCTTAATCAC+AGG - tig0018446:195819-195838 Msa1366330:three_prime_UTR 35.0%
AGCAAATTGACCTGTGATTA+AGG + tig0018446:195832-195851 None:intergenic 35.0%
! AACTGTTGCTACACACTTTT+AGG - tig0018446:195861-195880 Msa1366330:three_prime_UTR 35.0%
CACCTTAAATTTCACACTGT+CGG - tig0018446:195897-195916 Msa1366330:three_prime_UTR 35.0%
AACCGACAGTGTGAAATTTA+AGG + tig0018446:195902-195921 None:intergenic 35.0%
! GGTTTAGCTTAGAATCCAAT+TGG + tig0018446:196059-196078 None:intergenic 35.0%
! GTTTTCCATTATGCTAGATC+TGG - tig0018446:196323-196342 Msa1366330:intron 35.0%
AACTACCAGATCTAGCATAA+TGG + tig0018446:196331-196350 None:intergenic 35.0%
!! TTTTATGGGGTGATTTGGAT+TGG - tig0018446:196501-196520 Msa1366330:intron 35.0%
!!! TTGGATCCATCATTTTGACT+TGG - tig0018446:196520-196539 Msa1366330:intron 35.0%
GTTAGATCACCAATTTGCAT+TGG - tig0018446:196745-196764 Msa1366330:CDS 35.0%
TTGTTTCCTTCCTTAATTGC+AGG - tig0018446:196897-196916 Msa1366330:intron 35.0%
GATTAACCTGCAATTAAGGA+AGG + tig0018446:196906-196925 None:intergenic 35.0%
AGTCAGTGTATTGTATTGTG+AGG - tig0018446:196930-196949 Msa1366330:intron 35.0%
GTTTCAGCTAATAAATGTCG+AGG - tig0018446:197083-197102 Msa1366330:intron 35.0%
TTCAGCTAATAAATGTCGAG+GGG - tig0018446:197085-197104 Msa1366330:intron 35.0%
GGTTTATTGTATGTGTATGG+TGG - tig0018446:197172-197191 Msa1366330:intron 35.0%
! ACTACTTTGAGAACCAAAGA+TGG + tig0018446:197200-197219 None:intergenic 35.0%
!! ATCTTTGGTTCTCAAAGTAG+TGG - tig0018446:197199-197218 Msa1366330:intron 35.0%
GGCAAATCATTAAGGAAACT+CGG - tig0018446:197241-197260 Msa1366330:intron 35.0%
GCAAATCATTAAGGAAACTC+GGG - tig0018446:197242-197261 Msa1366330:intron 35.0%
AAACTCGGGTCATCATATTT+GGG - tig0018446:197256-197275 Msa1366330:intron 35.0%
! TCTTTGTAAGATTAGCCACA+AGG - tig0018446:197380-197399 Msa1366330:intron 35.0%
AAAACTCTACACAAGAGACT+TGG + tig0018446:197469-197488 None:intergenic 35.0%
AACTATTGTACACATGAGCT+TGG + tig0018446:197508-197527 None:intergenic 35.0%
ATTGTGGCCACTTATTATAC+AGG + tig0018446:197693-197712 None:intergenic 35.0%
GATGTGCATAAACTTGATTG+TGG + tig0018446:197709-197728 None:intergenic 35.0%
! ATAAGGTGTCTATCTAAGCA+AGG + tig0018446:197834-197853 None:intergenic 35.0%
CTTCTAACAACATCAACTCT+TGG + tig0018446:197980-197999 None:intergenic 35.0%
AATTTCTAAGCTTATCCCCT+TGG - tig0018446:198028-198047 Msa1366330:intron 35.0%
ATGAAAAATCTGACCAGAAC+TGG - tig0018446:198435-198454 Msa1366330:intron 35.0%
CATGTCTGAAAACATTCTCA+AGG + tig0018446:198582-198601 None:intergenic 35.0%
! CTTGAGAATGTTTTCAGACA+TGG - tig0018446:198580-198599 Msa1366330:intron 35.0%
TCTGGACCATCAAATGAAAA+TGG + tig0018446:198688-198707 None:intergenic 35.0%
! TGCATGGTTTGAAGTGTATT+TGG - tig0018446:198753-198772 Msa1366330:intron 35.0%
TAGGAGAGAAACAAATACAG+TGG + tig0018446:198838-198857 None:intergenic 35.0%
AAAAAGGGAGGAGAAAGAAT+AGG + tig0018446:198857-198876 None:intergenic 35.0%
AGTGATAAAAGGAAAAAGGG+AGG + tig0018446:198869-198888 None:intergenic 35.0%
TAGAAGCTTAAGCTACAAGA+TGG + tig0018446:198998-199017 None:intergenic 35.0%
! TTTTGCTTGTTCATACTACG+AGG - tig0018446:199111-199130 Msa1366330:intron 35.0%
TTTGCTTGTTCATACTACGA+GGG - tig0018446:199112-199131 Msa1366330:intron 35.0%
!! GAAATGCTTGAGGTATTGAA+TGG + tig0018446:199149-199168 None:intergenic 35.0%
ACAACATTTCGAAATGCTTG+AGG + tig0018446:199159-199178 None:intergenic 35.0%
TGTCCTCGAAGATTTAGATA+TGG - tig0018446:199176-199195 Msa1366330:intron 35.0%
TGACCATATCTAAATCTTCG+AGG + tig0018446:199182-199201 None:intergenic 35.0%
TGTTCGAAAAGTTAAGCATC+TGG + tig0018446:199336-199355 None:intergenic 35.0%
CAAGTTCAAAAGATCTGCTT+GGG + tig0018446:199561-199580 None:intergenic 35.0%
TACTACTTCTTGAACTAGAC+CGG - tig0018446:199626-199645 Msa1366330:intron 35.0%
GAAAGAAATGAGTGATCTTG+TGG - tig0018446:199726-199745 Msa1366330:intron 35.0%
AAGAAATGAGTGATCTTGTG+GGG - tig0018446:199728-199747 Msa1366330:intron 35.0%
! GTTTTTGCCAGATAACAGTT+TGG + tig0018446:199786-199805 None:intergenic 35.0%
TTTACTCCAAAAACTGCATC+AGG + tig0018446:199880-199899 None:intergenic 35.0%
TGTATTCTATTGCTCATAGG+GGG - tig0018446:199971-199990 Msa1366330:intron 35.0%
ATGATTTCTATGGTCCATTC+TGG - tig0018446:200048-200067 Msa1366330:CDS 35.0%
TTATTATCCTTTGGCTGCAA+TGG - tig0018446:200079-200098 Msa1366330:CDS 35.0%
! GGATTGTTTGATTTCCATGA+AGG - tig0018446:200100-200119 Msa1366330:CDS 35.0%
TCAGATGACAACAAAGCTAA+AGG - tig0018446:200260-200279 Msa1366330:five_prime_UTR 35.0%
TAGCCAAAATCAGCTAATCT+AGG + tig0018446:200329-200348 None:intergenic 35.0%
TGAAATGTTCGAAAAGGACA+CGG - tig0018446:200355-200374 Msa1366330:five_prime_UTR 35.0%
CATTTAGCTAAACCAACTGT+TGG - tig0018446:200467-200486 Msa1366330:intron 35.0%
!! GAGAGAGAGTTGATAAATAC+TGG - tig0018446:200524-200543 Msa1366330:intron 35.0%
AAAGCTAACATGGGTTCATT+TGG - tig0018446:200601-200620 Msa1366330:intron 35.0%
CTCTTAAAGACAAGGATGTA+TGG - tig0018446:200629-200648 Msa1366330:intron 35.0%
ATGAATGTTGTACCTCAAGA+TGG - tig0018446:200655-200674 Msa1366330:intron 35.0%
! TTTCTGCTGTCAGTTTTTGT+TGG - tig0018446:200960-200979 Msa1366330:intron 35.0%
ATCTCAATCAATAGATCCTC+TGG + tig0018446:201144-201163 None:intergenic 35.0%
! AGAGGATCTATTGATTGAGA+TGG - tig0018446:201143-201162 Msa1366330:intron 35.0%
ATCACGGAAGATTACAAAAC+CGG + tig0018446:201187-201206 None:intergenic 35.0%
! CAATCATTGGCTGTTTATCA+CGG + tig0018446:201203-201222 None:intergenic 35.0%
AAGAAATTGTGGCTAACTAG+TGG - tig0018446:201330-201349 Msa1366330:five_prime_UTR 35.0%
TATTATCTGCTATTGCTGCA+AGG - tig0018446:201421-201440 Msa1366330:five_prime_UTR 35.0%
ATTATCTGCTATTGCTGCAA+GGG - tig0018446:201422-201441 Msa1366330:five_prime_UTR 35.0%
AAATAGGCATCACGCTTTAT+AGG - tig0018446:201561-201580 Msa1366330:intron 35.0%
! AAAATTTTGCTGCCTGCATT+TGG - tig0018446:201590-201609 Msa1366330:five_prime_UTR 35.0%
! AAATTTTGCTGCCTGCATTT+GGG - tig0018446:201591-201610 Msa1366330:five_prime_UTR 35.0%
CTTACATAATACCCAAATGC+AGG + tig0018446:201605-201624 None:intergenic 35.0%
!! GTTGCTACACACTTTTAGGT+TGG - tig0018446:195865-195884 Msa1366330:three_prime_UTR 40.0%
CGACAGTGTGAAATTTAAGG+TGG + tig0018446:195899-195918 None:intergenic 40.0%
! AGTGTCTGGTCCAAAGTATT+TGG - tig0018446:196624-196643 Msa1366330:CDS 40.0%
!!! TGGGTTTTGGATTGCAGATT+TGG - tig0018446:196999-197018 Msa1366330:CDS 40.0%
TCAGCTAATAAATGTCGAGG+GGG - tig0018446:197086-197105 Msa1366330:intron 40.0%
! TGTGTTGCGACGGTTTTTAT+TGG - tig0018446:197151-197170 Msa1366330:intron 40.0%
!! GGTTCATCTGCTCTAGAATA+TGG - tig0018446:197220-197239 Msa1366330:intron 40.0%
GAAACTCGGGTCATCATATT+TGG - tig0018446:197255-197274 Msa1366330:intron 40.0%
AGACTTACAGGGAAACTCTT+TGG + tig0018446:197361-197380 None:intergenic 40.0%
AATAGAGTGGATGTTCCTTG+TGG + tig0018446:197398-197417 None:intergenic 40.0%
GGTTTGTGATGATCGACATT+CGG - tig0018446:197800-197819 Msa1366330:CDS 40.0%
GACACCTTATCTATCAACTG+CGG - tig0018446:197844-197863 Msa1366330:CDS 40.0%
!! TCATCCGCAGTTGATAGATA+AGG + tig0018446:197851-197870 None:intergenic 40.0%
CTATCAACTGCGGATGAAAT+TGG - tig0018446:197854-197873 Msa1366330:CDS 40.0%
GAAATTGGACTTGTCTGTGA+TGG - tig0018446:197869-197888 Msa1366330:CDS 40.0%
AGCATCTCAGATTATCTCCT+AGG - tig0018446:198069-198088 Msa1366330:intron 40.0%
ATTAGGACATGGCAAATGCT+CGG + tig0018446:198338-198357 None:intergenic 40.0%
TTGCCATGTCCTAATATTGC+AGG - tig0018446:198343-198362 Msa1366330:intron 40.0%
TAACAGGGACCTGCAATATT+AGG + tig0018446:198355-198374 None:intergenic 40.0%
!! TGCTTTTTGGCCACTTAACA+GGG + tig0018446:198370-198389 None:intergenic 40.0%
! GGTCAGATTTTTCATGTGCA+AGG + tig0018446:198430-198449 None:intergenic 40.0%
AAAATCTGACCAGAACTGGA+TGG - tig0018446:198439-198458 Msa1366330:intron 40.0%
!!! CTTTTTCAACCATCCAGTTC+TGG + tig0018446:198451-198470 None:intergenic 40.0%
CAGAACTGGATGGTTGAAAA+AGG - tig0018446:198449-198468 Msa1366330:intron 40.0%
! GGTGGGACTCATTTTCATTA+TGG - tig0018446:198494-198513 Msa1366330:intron 40.0%
GTACATTAACGGAACATGCA+TGG - tig0018446:198737-198756 Msa1366330:intron 40.0%
CATATCATGTTGGACAATGC+TGG - tig0018446:199224-199243 Msa1366330:intron 40.0%
! CTGGATTTGCTTGCATTTCA+TGG - tig0018446:199269-199288 Msa1366330:intron 40.0%
TGGCAATGCAAAGTTGAAAC+TGG + tig0018446:199316-199335 None:intergenic 40.0%
TCAAAAGATCTGCTTGGGTA+TGG + tig0018446:199556-199575 None:intergenic 40.0%
GCAAGTTCAAAAGATCTGCT+TGG + tig0018446:199562-199581 None:intergenic 40.0%
GTTCTCGTTGTCGAATTGAT+TGG - tig0018446:199587-199606 Msa1366330:intron 40.0%
!! ATTGATTGGCTTCAGAGAGA+TGG - tig0018446:199601-199620 Msa1366330:intron 40.0%
ACTACTTCTTGAACTAGACC+GGG - tig0018446:199627-199646 Msa1366330:intron 40.0%
CTCAGGATGAAGAGAATCTA+AGG - tig0018446:199698-199717 Msa1366330:intron 40.0%
GTATTCTATTGCTCATAGGG+GGG - tig0018446:199972-199991 Msa1366330:intron 40.0%
AAACAATCCATTGCAGCCAA+AGG + tig0018446:200089-200108 None:intergenic 40.0%
GACAACAAAGCTAAAGGTAG+TGG - tig0018446:200266-200285 Msa1366330:five_prime_UTR 40.0%
AAATCAGCTAATCTAGGAGG+AGG + tig0018446:200323-200342 None:intergenic 40.0%
CCAAAATCAGCTAATCTAGG+AGG + tig0018446:200326-200345 None:intergenic 40.0%
!! CCTCCTAGATTAGCTGATTT+TGG - tig0018446:200323-200342 Msa1366330:five_prime_UTR 40.0%
ATCTTGTGGTACAGGAACTA+TGG - tig0018446:200500-200519 Msa1366330:intron 40.0%
ATATATGACAGAGGCCTCAT+AGG - tig0018446:200697-200716 Msa1366330:intron 40.0%
GATTCAATACCAGTCATGAG+TGG + tig0018446:200725-200744 None:intergenic 40.0%
AACTGACAGCAGAAAATGCA+CGG + tig0018446:200955-200974 None:intergenic 40.0%
CAAGATGCATCGTGATAGTT+AGG + tig0018446:201028-201047 None:intergenic 40.0%
TATCACGATGCATCTTGAAC+AGG - tig0018446:201031-201050 Msa1366330:intron 40.0%
AAGCATTCTCAACATACCCT+CGG - tig0018446:201058-201077 Msa1366330:intron 40.0%
AGTACTTAACTGCTTTGCAC+TGG - tig0018446:201235-201254 Msa1366330:intron 40.0%
GTACTTAACTGCTTTGCACT+GGG - tig0018446:201236-201255 Msa1366330:intron 40.0%
CGATTCCACTTGGAGAAAGT+GGG + tig0018446:195553-195572 None:intergenic 45.0%
ACTTTCTCCAAGTGGAATCG+CGG - tig0018446:195553-195572 Msa1366330:three_prime_UTR 45.0%
!! CAGATTTGGCTCTGAATGTC+TGG - tig0018446:197013-197032 Msa1366330:CDS 45.0%
AAAAACCGTCGCAACACAGA+TGG + tig0018446:197149-197168 None:intergenic 45.0%
!! GTGTATGGTGGATCCATCTT+TGG - tig0018446:197184-197203 Msa1366330:intron 45.0%
ATCTTCATCAAGTTTCGGGC+AGG - tig0018446:197312-197331 Msa1366330:intron 45.0%
TTTACCTTGTATCCTGCTGG+AGG + tig0018446:197951-197970 None:intergenic 45.0%
AGCTTTACCTTGTATCCTGC+TGG + tig0018446:197954-197973 None:intergenic 45.0%
GGACCTGCAATATTAGGACA+TGG + tig0018446:198349-198368 None:intergenic 45.0%
TATTGCAGGTCCCTGTTAAG+TGG - tig0018446:198357-198376 Msa1366330:intron 45.0%
!!! CTGCTTTTTGGCCACTTAAC+AGG + tig0018446:198371-198390 None:intergenic 45.0%
!! CACACCTCATCTCTGCTTTT+TGG + tig0018446:198383-198402 None:intergenic 45.0%
CAAAAAGCAGAGATGAGGTG+TGG - tig0018446:198381-198400 Msa1366330:intron 45.0%
TCATGTGCAAGGTGAGTATG+CGG + tig0018446:198419-198438 None:intergenic 45.0%
GGTGAAAAGATAGCGTTTCC+TGG - tig0018446:198470-198489 Msa1366330:intron 45.0%
GAAAAGATAGCGTTTCCTGG+AGG - tig0018446:198473-198492 Msa1366330:intron 45.0%
GGCAAATGTAAGTCTGCATC+TGG - tig0018446:198541-198560 Msa1366330:intron 45.0%
!! AAGTCTGCATCTGGCTTTAC+TGG - tig0018446:198550-198569 Msa1366330:intron 45.0%
TTTCAGACATGGGAGTTCTG+TGG - tig0018446:198591-198610 Msa1366330:intron 45.0%
TTCAGACATGGGAGTTCTGT+GGG - tig0018446:198592-198611 Msa1366330:intron 45.0%
!! ATGCACATCATTTGGTGCCA+AGG + tig0018446:199461-199480 None:intergenic 45.0%
ATCCAATTTGCCCTCGAAAG+AGG - tig0018446:199490-199509 Msa1366330:CDS 45.0%
TTCCTCTTTCGAGGGCAAAT+TGG + tig0018446:199495-199514 None:intergenic 45.0%
AGAGGAATTCCGGCATATCT+TGG - tig0018446:199508-199527 Msa1366330:CDS 45.0%
GAGTATGCGAAATAACCTCC+TGG + tig0018446:199661-199680 None:intergenic 45.0%
TCATCCTGAGCATATGCTTC+TGG + tig0018446:199688-199707 None:intergenic 45.0%
! GCAGATCCTGATGCAGTTTT+TGG - tig0018446:199871-199890 Msa1366330:intron 45.0%
GAGTACTCACGTTCACTGTA+AGG + tig0018446:199922-199941 None:intergenic 45.0%
GGGTCATTCTGTTTCCTTCA+TGG + tig0018446:200117-200136 None:intergenic 45.0%
TGGAGCTGCTCTTAAAGACA+AGG - tig0018446:200621-200640 Msa1366330:intron 45.0%
AGTGTGTTTGGTCCATCTTG+AGG + tig0018446:200670-200689 None:intergenic 45.0%
TTGTCAAATAGCGGTTGCAG+TGG + tig0018446:200857-200876 None:intergenic 45.0%
CTTACGACTTACTCCATGCA+TGG - tig0018446:201082-201101 Msa1366330:intron 45.0%
GAAGAAAGATTGCAGTCCAG+AGG - tig0018446:201125-201144 Msa1366330:intron 45.0%
CGGAAGATTACAAAACCGGT+AGG + tig0018446:201183-201202 None:intergenic 45.0%
GCTAACTAGTGGAAGCTTCA+GGG - tig0018446:201341-201360 Msa1366330:five_prime_UTR 45.0%
TGCTTACTGCTTCACCACTT+GGG + tig0018446:201460-201479 None:intergenic 45.0%
TTGCTTACTGCTTCACCACT+TGG + tig0018446:201461-201480 None:intergenic 45.0%
GCAAACCCACTTTCTCCAAG+TGG - tig0018446:195545-195564 Msa1366330:three_prime_UTR 50.0%
GCGATTCCACTTGGAGAAAG+TGG + tig0018446:195554-195573 None:intergenic 50.0%
TTTACCACCGCGATTCCACT+TGG + tig0018446:195563-195582 None:intergenic 50.0%
CTCTGATGAATTCCGTCTCG+AGG + tig0018446:195611-195630 None:intergenic 50.0%
! TTTCCCTCCTATGGAGTGTC+TGG - tig0018446:196610-196629 Msa1366330:intron 50.0%
CTTTGGACCAGACACTCCAT+AGG + tig0018446:196620-196639 None:intergenic 50.0%
!! TTGGTGTTGCGACGTTCAGT+TGG - tig0018446:196979-196998 Msa1366330:CDS 50.0%
!! TGGTGTTGCGACGTTCAGTT+GGG - tig0018446:196980-196999 Msa1366330:CDS 50.0%
! TGCGACGTTCAGTTGGGTTT+TGG - tig0018446:196986-197005 Msa1366330:CDS 50.0%
TGCTTCCATCTGTGTTGCGA+CGG - tig0018446:197141-197160 Msa1366330:intron 50.0%
CGGGTCATCATATTTGGGTG+CGG - tig0018446:197261-197280 Msa1366330:intron 50.0%
GGTGCGGATGATGACAATGA+TGG - tig0018446:197277-197296 Msa1366330:intron 50.0%
ATCAAGTTTCGGGCAGGTTG+AGG - tig0018446:197318-197337 Msa1366330:intron 50.0%
GACATTGTCCTCCTGCAGAA+AGG - tig0018446:197904-197923 Msa1366330:CDS 50.0%
CAATTGTAGCGCCTTTCTGC+AGG + tig0018446:197918-197937 None:intergenic 50.0%
GTGGCCAAAAAGCAGAGATG+AGG - tig0018446:198376-198395 Msa1366330:intron 50.0%
CATGTGCAAGGTGAGTATGC+GGG + tig0018446:198418-198437 None:intergenic 50.0%
AAGATAGCGTTTCCTGGAGG+TGG - tig0018446:198476-198495 Msa1366330:intron 50.0%
AGATAGCGTTTCCTGGAGGT+GGG - tig0018446:198477-198496 Msa1366330:intron 50.0%
TGAAAATGAGTCCCACCTCC+AGG + tig0018446:198491-198510 None:intergenic 50.0%
TTGCGGACAGTGCTTGATGT+TGG - tig0018446:199379-199398 Msa1366330:intron 50.0%
! ACAGTGCTTGATGTTGGCTG+TGG - tig0018446:199385-199404 Msa1366330:CDS 50.0%
!! GGCTGTGGTGTTGCAAGTTT+CGG - tig0018446:199400-199419 Msa1366330:CDS 50.0%
!! TGTGGTGTTGCAAGTTTCGG+AGG - tig0018446:199403-199422 Msa1366330:CDS 50.0%
!! GTGGTGTTGCAAGTTTCGGA+GGG - tig0018446:199404-199423 Msa1366330:CDS 50.0%
TGCCCTCGAAAGAGGAATTC+CGG - tig0018446:199498-199517 Msa1366330:CDS 50.0%
TGCCGGAATTCCTCTTTCGA+GGG + tig0018446:199503-199522 None:intergenic 50.0%
ATGCCGGAATTCCTCTTTCG+AGG + tig0018446:199504-199523 None:intergenic 50.0%
! TCCGGCATATCTTGGTGTGT+TGG - tig0018446:199516-199535 Msa1366330:CDS 50.0%
CCCAACACACCAAGATATGC+CGG + tig0018446:199520-199539 None:intergenic 50.0%
! CCGGCATATCTTGGTGTGTT+GGG - tig0018446:199517-199536 Msa1366330:CDS 50.0%
TTGAACTAGACCGGGTTCTC+AGG - tig0018446:199635-199654 Msa1366330:intron 50.0%
! GTCTCCAGAAGCATATGCTC+AGG - tig0018446:199681-199700 Msa1366330:intron 50.0%
ATCTTGTGGGGCGTATGTGT+TGG - tig0018446:199740-199759 Msa1366330:intron 50.0%
! AAGGTAGTGGCTTAGCTCCA+TGG - tig0018446:200279-200298 Msa1366330:five_prime_UTR 50.0%
AGCTAATCTAGGAGGAGGAC+TGG + tig0018446:200318-200337 None:intergenic 50.0%
GGAGTAAGTCGTAAGTCCGA+GGG + tig0018446:201077-201096 None:intergenic 50.0%
TGGAGTAAGTCGTAAGTCCG+AGG + tig0018446:201078-201097 None:intergenic 50.0%
CAGACAAGACAGTCCATGCA+TGG + tig0018446:201098-201117 None:intergenic 50.0%
AGCAGTTGCAACCGCAGATT+CGG - tig0018446:201260-201279 Msa1366330:intron 50.0%
AGAGTCAGAACCCGAATCTG+CGG + tig0018446:201274-201293 None:intergenic 50.0%
! TTCGGGTTCTGACTCTGTTC+AGG - tig0018446:201278-201297 Msa1366330:five_prime_UTR 50.0%
GGCTAACTAGTGGAAGCTTC+AGG - tig0018446:201340-201359 Msa1366330:five_prime_UTR 50.0%
! GGATCAAAGCACTTCCCAAG+TGG - tig0018446:201443-201462 Msa1366330:five_prime_UTR 50.0%
TTCTCCAAGTGGAATCGCGG+TGG - tig0018446:195556-195575 Msa1366330:three_prime_UTR 55.0%
GGACCAGACACTCCATAGGA+GGG + tig0018446:196616-196635 None:intergenic 55.0%
TGGACCAGACACTCCATAGG+AGG + tig0018446:196617-196636 None:intergenic 55.0%
ATGTCGAGGGGGAGATCTGA+TGG - tig0018446:197097-197116 Msa1366330:intron 55.0%
TGTCGAGGGGGAGATCTGAT+GGG - tig0018446:197098-197117 Msa1366330:intron 55.0%
! AAGTTTCGGGCAGGTTGAGG+AGG - tig0018446:197321-197340 Msa1366330:intron 55.0%
TTGTAGCGCCTTTCTGCAGG+AGG + tig0018446:197915-197934 None:intergenic 55.0%
TGCTTGATTCCACCTCCAGC+AGG - tig0018446:197936-197955 Msa1366330:CDS 55.0%
TCCACCTCCAGCAGGATACA+AGG - tig0018446:197944-197963 Msa1366330:CDS 55.0%
ACCTTGTATCCTGCTGGAGG+TGG + tig0018446:197948-197967 None:intergenic 55.0%
CGTCAGACTGGCATAGAGGA+GGG + tig0018446:199852-199871 None:intergenic 55.0%
TCTGCGTCAGACTGGCATAG+AGG + tig0018446:199856-199875 None:intergenic 55.0%
CATCAGGATCTGCGTCAGAC+TGG + tig0018446:199864-199883 None:intergenic 55.0%
CTGGTCAATCTTGCAGGCCA+TGG + tig0018446:200299-200318 None:intergenic 55.0%
!! GGAGGACTGGTCAATCTTGC+AGG + tig0018446:200305-200324 None:intergenic 55.0%
AGTCATGAGTGGCGCCTATG+AGG + tig0018446:200714-200733 None:intergenic 55.0%
TCATAGGCGCCACTCATGAC+TGG - tig0018446:200713-200732 Msa1366330:intron 55.0%
AACCGGTAGGTCTAAGCACG+CGG + tig0018446:201170-201189 None:intergenic 55.0%
GCAGTTGCAACCGCAGATTC+GGG - tig0018446:201261-201280 Msa1366330:intron 55.0%
! TTTCGGGCAGGTTGAGGAGG+AGG - tig0018446:197324-197343 Msa1366330:intron 60.0%
AACCTCCTGGCCTGAGAACC+CGG + tig0018446:199648-199667 None:intergenic 60.0%
CATAGAGGAGGGCGAGTACC+AGG + tig0018446:199841-199860 None:intergenic 60.0%
GCGTCAGACTGGCATAGAGG+AGG + tig0018446:199853-199872 None:intergenic 60.0%
GACCGCGTGCTTAGACCTAC+CGG - tig0018446:201165-201184 Msa1366330:intron 60.0%
CTAGACCGGGTTCTCAGGCC+AGG - tig0018446:199640-199659 Msa1366330:intron 65.0%
GACCGGGTTCTCAGGCCAGG+AGG - tig0018446:199643-199662 Msa1366330:intron 70.0%
Chromosome Type Strat End Strand Name
tig0018446 gene 195544 201803 195544 ID=Msa1366330;Name=Msa1366330
tig0018446 mRNA 195544 201803 195544 ID=Msa1366330-mRNA-1;Parent=Msa1366330;Name=Msa1366330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=521|1|1|1|0.66|0.6|10|429|624
tig0018446 exon 195544 196294 195544 ID=Msa1366330-mRNA-1:exon:15051;Parent=Msa1366330-mRNA-1
tig0018446 exon 196613 196833 196613 ID=Msa1366330-mRNA-1:exon:15050;Parent=Msa1366330-mRNA-1
tig0018446 exon 196971 197083 196971 ID=Msa1366330-mRNA-1:exon:15049;Parent=Msa1366330-mRNA-1
tig0018446 exon 197416 198010 197416 ID=Msa1366330-mRNA-1:exon:15048;Parent=Msa1366330-mRNA-1
tig0018446 exon 198800 198982 198800 ID=Msa1366330-mRNA-1:exon:15047;Parent=Msa1366330-mRNA-1
tig0018446 exon 199382 199546 199382 ID=Msa1366330-mRNA-1:exon:15046;Parent=Msa1366330-mRNA-1
tig0018446 exon 199975 200428 199975 ID=Msa1366330-mRNA-1:exon:15045;Parent=Msa1366330-mRNA-1
tig0018446 exon 201267 201506 201267 ID=Msa1366330-mRNA-1:exon:15044;Parent=Msa1366330-mRNA-1
tig0018446 exon 201586 201654 201586 ID=Msa1366330-mRNA-1:exon:15043;Parent=Msa1366330-mRNA-1
tig0018446 exon 201770 201803 201770 ID=Msa1366330-mRNA-1:exon:15042;Parent=Msa1366330-mRNA-1
tig0018446 five_prime_UTR 201770 201803 201770 ID=Msa1366330-mRNA-1:five_prime_utr;Parent=Msa1366330-mRNA-1
tig0018446 five_prime_UTR 201586 201654 201586 ID=Msa1366330-mRNA-1:five_prime_utr;Parent=Msa1366330-mRNA-1
tig0018446 five_prime_UTR 201267 201506 201267 ID=Msa1366330-mRNA-1:five_prime_utr;Parent=Msa1366330-mRNA-1
tig0018446 five_prime_UTR 200251 200428 200251 ID=Msa1366330-mRNA-1:five_prime_utr;Parent=Msa1366330-mRNA-1
tig0018446 CDS 199975 200250 199975 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 199382 199546 199382 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 198800 198982 198800 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 197416 198010 197416 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 196971 197083 196971 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 196613 196833 196613 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 CDS 195973 196294 195973 ID=Msa1366330-mRNA-1:cds;Parent=Msa1366330-mRNA-1
tig0018446 three_prime_UTR 195544 195972 195544 ID=Msa1366330-mRNA-1:three_prime_utr;Parent=Msa1366330-mRNA-1
Gene Sequence

>Msa1366330

ATGTCGAGGGGGAGATCTGATGGGTCACAAAAGAAGCGCATAGTTGCTTCCATCTGTGTTGCGACGGTTTTTATTGGTTTATTGTATGTGTATGGTGGATCCATCTTTGGTTCTCAAAGTAGTGGTTCATCTGCTCTAGAATATGGCAAATCATTAAGGAAACTCGGGTCATCATATTTGGGTGCGGATGATGACAATGATGGCAAGCAAGATGAATCTTCATCAAGTTTCGGGCAGGTTGAGGAGGAGGACAATATTGTTCCAAAGAGTTTCCCTGTTTGTGATGATCGACATTCGGAGTTGATTCCTTGCTTAGATAGACACCTTATCTATCAACTGCGGATGAAATTGGACTTGTCTGTGATGGAACACTATGAGAGACATTGTCCTCCTGCAGAAAGGCGCTACAATTGCTTGATTCCACCTCCAGCAGGATACAAGGTCCCTGTTAAGTGGCCAAAAAGCAGAGATGAGGTGTGGAAAGCAAATATCCCGCATACTCACCTTGCACATGAAAAATCTGACCAGAACTGGATGGTTGAAAAAGGTGAAAAGATAGCGTTTCCTGGAGGTGGGACTCATTTTCATTATGGAGCTGATAAGTACATTGCATCAATGGCAAATATGCTTAACTTTTCGAACAATAATCTAAACAATGAAGGAAGATTGCGGACAGTGCTTGATGTTGGCTGTGGTGTTGCAAGTTTCGGAGGGTACCTTCTTGCATCTGATATCATTACAATGTCCTTGGCACCAAATGATGTGCATCAAAATCAAATCCAATTTGCCCTCGAAAGAGGAATTCCGGCATATCTTGGTGTGTTGGGAACTAAGAGACTTCCATACCCAAGCAGATCTTTTGAACTTGCTCATTGTTCTCGTTGTCGAATTGATTGGCTTCAGAGAGATGGAATACTACTTCTTGAACTAGACCGGGTTCTCAGGCCAGGAGGTTATTTCGCATACTCGTCTCCAGAAGCATATGCTCAGGATGAAGAGAATCTAAGGATATGGAAAGAAATGAGTGATCTTGTGGGGCGTATGTGTTGGAGAATAGCTTCAAAAAAGAACCAAACTGTTATCTGGCAAAAACCTTTGACAAATGATTGCTATAAAAAAAGAGAACCTGGTACTCGCCCTCCTCTATGCCAGTCTGACGCAGATCCTGATGCAGTTTTTGGAGTAAATATGGAAGTTTGCATAACACCTTACAGTGAACATGACAACAAAGCTAAAGGTAGTGGCTTAGCTCCATGGCCTGCAAGATTGACCAGTCCTCCTCCTAGATTAGCTGATTTTGGCTATTCAAATGAAATGTTCGAAAAGGACACGGAACTATGGCGAGAGAGAGTTGATAAATACTGGAGTCTCATGAGTAAAAAAATCAAATCCGATACAATAAGGAATATTATGGATATGAAAGCTAACATGGGTTCATTTGGAGCTGCTCTTAAAGACAAGGATGTATGGGTGATGAATGTTGTACCTCAAGATGGACCAAACACACTTAAAGTTATATATGACAGAGGCCTCATAGGCGCCACTCATGACTGGTGTGAAGCATTCTCAACATACCCTCGGACTTACGACTTACTCCATGCATGGACTGTCTTGTCTGACGTAGCGAAGAAAGATTGCAGTCCAGAGGATCTATTGATTGAGATGGACCGCGTGCTTAGACCTACCGGTTTTGTAATCTTCCGTGATAAACAGCCAATGATTGATTTCGTGAAGAAGTACTTAACTGCTTTGCACTGGGAAGCAGTTGCAACCGCAGATTCGGGTTCTGACTCTGTTCAGGACAGTGATGAAGTTGTTTTTATCATACAGAAGAAATTGTGGCTAACTAGTGGAAGCTTCAGGGATACTGAATGA
Protein sequence

>Msa1366330

MSRGRSDGSQKKRIVASICVATVFIGLLYVYGGSIFGSQSSGSSALEYGKSLRKLGSSYLGADDDNDGKQDESSSSFGQVEEEDNIVPKSFPVCDDRHSELIPCLDRHLIYQLRMKLDLSVMEHYERHCPPAERRYNCLIPPPAGYKVPVKWPKSRDEVWKANIPHTHLAHEKSDQNWMVEKGEKIAFPGGGTHFHYGADKYIASMANMLNFSNNNLNNEGRLRTVLDVGCGVASFGGYLLASDIITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRVLRPGGYFAYSSPEAYAQDEENLRIWKEMSDLVGRMCWRIASKKNQTVIWQKPLTNDCYKKREPGTRPPLCQSDADPDAVFGVNMEVCITPYSEHDNKAKGSGLAPWPARLTSPPPRLADFGYSNEMFEKDTELWRERVDKYWSLMSKKIKSDTIRNIMDMKANMGSFGAALKDKDVWVMNVVPQDGPNTLKVIYDRGLIGATHDWCEAFSTYPRTYDLLHAWTVLSDVAKKDCSPEDLLIEMDRVLRPTGFVIFRDKQPMIDFVKKYLTALHWEAVATADSGSDSVQDSDEVVFIIQKKLWLTSGSFRDTE*