Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374100 | CAD1832007.1 | 68.627 | 51 | 9 | 1 | 27 | 70 | 130 | 180 | 5.89e-12 | 68.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374100 | A0A6V7PMG1 | 68.627 | 51 | 9 | 1 | 27 | 70 | 130 | 180 | 2.81e-12 | 68.6 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1374100 | Msa1382600 | 0.896354 | 3.999884e-76 | -8.615850e-47 |
Msa1374100 | Msa1451620 | -0.806602 | 7.595893e-50 | -8.615850e-47 |
Msa0662650 | Msa1374100 | 0.800005 | 1.765517e-48 | -8.615850e-47 |
Msa1233890 | Msa1374100 | 0.814782 | 1.293080e-51 | -8.615850e-47 |
Msa1239530 | Msa1374100 | 0.805798 | 1.121507e-49 | -8.615850e-47 |
Msa0406880 | Msa1374100 | 0.812487 | 4.135981e-51 | -8.615850e-47 |
Msa0457880 | Msa1374100 | 0.803892 | 2.806032e-49 | -8.615850e-47 |
Msa1035310 | Msa1374100 | 0.802611 | 5.167232e-49 | -8.615850e-47 |
Msa0279790 | Msa1374100 | 0.800610 | 1.329428e-48 | -8.615850e-47 |
Msa0288100 | Msa1374100 | 0.803057 | 4.181027e-49 | -8.615850e-47 |
Msa0350990 | Msa1374100 | 0.843923 | 1.039413e-58 | -8.615850e-47 |
Msa0351030 | Msa1374100 | 0.841090 | 5.865185e-58 | -8.615850e-47 |
Msa0351100 | Msa1374100 | 0.838130 | 3.451860e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1374100 | MtrunA17_Chr1g0155331 | 96.296 | 27 | 1 | 0 | 27 | 53 | 135 | 161 | 2.80e-12 | 59.3 |
Msa1374100 | MtrunA17_Chr2g0298841 | 96.296 | 27 | 1 | 0 | 27 | 53 | 135 | 161 | 2.80e-12 | 59.3 |
Msa1374100 | MtrunA17_Chr4g0002321 | 92.593 | 27 | 2 | 0 | 27 | 53 | 134 | 160 | 8.41e-12 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 18 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTATTCAATGACAGGTTCT+TGG | 0.316176 | tig0019465:-101605 | Msa1374100:intron |
CCCTGACGCTCTTCAGATTA+GGG | 0.318959 | tig0019465:+101834 | None:intergenic |
AATAATTACTGAAATCCTTA+TGG | 0.356825 | tig0019465:+102879 | None:intergenic |
TCTTCAAATAAAGGTTCAAC+TGG | 0.368005 | tig0019465:+102856 | None:intergenic |
TCCCTGACGCTCTTCAGATT+AGG | 0.391787 | tig0019465:+101833 | None:intergenic |
ACCCTAATCTGAAGAGCGTC+AGG | 0.410603 | tig0019465:-101835 | Msa1374100:CDS |
ACAAGCAGATTTCATCGAAC+AGG | 0.426738 | tig0019465:-101778 | Msa1374100:intron |
TTATTCAATGACAGGTTCTT+GGG | 0.454218 | tig0019465:-101604 | Msa1374100:intron |
TTGATCTACAAGAGGGGATA+CGG | 0.470817 | tig0019465:-101809 | Msa1374100:CDS |
GGAATTGCTTATGTTACATA+CGG | 0.485132 | tig0019465:-101860 | Msa1374100:CDS |
GTTCGATGATGAATGCCATA+AGG | 0.503644 | tig0019465:-102894 | None:intergenic |
TATTTGAAGAATGTGAAAAG+AGG | 0.510086 | tig0019465:-102843 | Msa1374100:intron |
GAATTGCTTATGTTACATAC+GGG | 0.584032 | tig0019465:-101859 | Msa1374100:CDS |
TGACAGGTTCTTGGGAAGCA+CGG | 0.610853 | tig0019465:-101596 | Msa1374100:intron |
CAGGGAATTGATCTACAAGA+GGG | 0.612367 | tig0019465:-101816 | Msa1374100:CDS |
TCAGGGAATTGATCTACAAG+AGG | 0.639447 | tig0019465:-101817 | Msa1374100:CDS |
CCCTAATCTGAAGAGCGTCA+GGG | 0.672345 | tig0019465:-101834 | Msa1374100:CDS |
AGGGAATTGATCTACAAGAG+GGG | 0.716288 | tig0019465:-101815 | Msa1374100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTAAATTAGAAACTAATT+TGG | + | tig0019465:101660-101679 | None:intergenic | 15.0% |
!!! | TTTTTTACAATAAGTTAGAT+TGG | + | tig0019465:102220-102239 | None:intergenic | 15.0% |
!! | AATCTAACTTATTGTAAAAA+AGG | - | tig0019465:102219-102238 | Msa1374100:intron | 15.0% |
!!! | TGAATATTTTAACCATTAAT+AGG | - | tig0019465:102492-102511 | Msa1374100:intron | 15.0% |
!! | ATGTAAATTAGAAACTAATT+TGG | + | tig0019465:101660-101679 | None:intergenic | 15.0% |
!!! | TTTTTTACAATAAGTTAGAT+TGG | + | tig0019465:102220-102239 | None:intergenic | 15.0% |
!! | AATCTAACTTATTGTAAAAA+AGG | - | tig0019465:102219-102238 | Msa1374100:intron | 15.0% |
!!! | TGAATATTTTAACCATTAAT+AGG | - | tig0019465:102492-102511 | Msa1374100:intron | 15.0% |
!! | AATAATTACTGAAATCCTTA+TGG | + | tig0019465:101583-101602 | None:intergenic | 20.0% |
!!! | TTTTCACATTCTTCAAATAA+AGG | + | tig0019465:101615-101634 | None:intergenic | 20.0% |
!! | CAATCATAAAAACTTTCATA+GGG | + | tig0019465:101926-101945 | None:intergenic | 20.0% |
!! | ATTCATAAAAACTTTGCATA+GGG | + | tig0019465:101958-101977 | None:intergenic | 20.0% |
!! | AAACAAAAACTATTGAACAT+TGG | - | tig0019465:102106-102125 | Msa1374100:intron | 20.0% |
!! | ATAAGTTTACAAAACAACAA+AGG | + | tig0019465:102245-102264 | None:intergenic | 20.0% |
!! | AATAATTACTGAAATCCTTA+TGG | + | tig0019465:101583-101602 | None:intergenic | 20.0% |
!!! | TTTTCACATTCTTCAAATAA+AGG | + | tig0019465:101615-101634 | None:intergenic | 20.0% |
!! | CAATCATAAAAACTTTCATA+GGG | + | tig0019465:101926-101945 | None:intergenic | 20.0% |
!! | ATTCATAAAAACTTTGCATA+GGG | + | tig0019465:101958-101977 | None:intergenic | 20.0% |
!! | AAACAAAAACTATTGAACAT+TGG | - | tig0019465:102106-102125 | Msa1374100:intron | 20.0% |
!! | ATAAGTTTACAAAACAACAA+AGG | + | tig0019465:102245-102264 | None:intergenic | 20.0% |
! | TATTTGAAGAATGTGAAAAG+AGG | - | tig0019465:101616-101635 | Msa1374100:intron | 25.0% |
! | TGTGAATACATCTATTCTTT+AGG | - | tig0019465:101746-101765 | Msa1374100:intron | 25.0% |
!!! | TACATCTATTCTTTAGGATT+AGG | - | tig0019465:101752-101771 | Msa1374100:intron | 25.0% |
! | AACAGCATTATGTAATACAT+AGG | + | tig0019465:101784-101803 | None:intergenic | 25.0% |
! | GCAATCATAAAAACTTTCAT+AGG | + | tig0019465:101927-101946 | None:intergenic | 25.0% |
! | CATTCATAAAAACTTTGCAT+AGG | + | tig0019465:101959-101978 | None:intergenic | 25.0% |
!! | CTATGCAAAGTTTTTATGAA+TGG | - | tig0019465:101957-101976 | Msa1374100:intron | 25.0% |
! | CATTAATGCACTATTGTTAA+TGG | + | tig0019465:102178-102197 | None:intergenic | 25.0% |
!! | TGTTATTTGTGACAATGATT+AGG | - | tig0019465:102340-102359 | Msa1374100:intron | 25.0% |
! | TACAACATTTAGTGATTGTA+GGG | + | tig0019465:102724-102743 | None:intergenic | 25.0% |
! | TATTTGAAGAATGTGAAAAG+AGG | - | tig0019465:101616-101635 | Msa1374100:intron | 25.0% |
! | TGTGAATACATCTATTCTTT+AGG | - | tig0019465:101746-101765 | Msa1374100:intron | 25.0% |
!!! | TACATCTATTCTTTAGGATT+AGG | - | tig0019465:101752-101771 | Msa1374100:intron | 25.0% |
! | AACAGCATTATGTAATACAT+AGG | + | tig0019465:101784-101803 | None:intergenic | 25.0% |
! | GCAATCATAAAAACTTTCAT+AGG | + | tig0019465:101927-101946 | None:intergenic | 25.0% |
! | CATTCATAAAAACTTTGCAT+AGG | + | tig0019465:101959-101978 | None:intergenic | 25.0% |
!! | CTATGCAAAGTTTTTATGAA+TGG | - | tig0019465:101957-101976 | Msa1374100:intron | 25.0% |
! | CATTAATGCACTATTGTTAA+TGG | + | tig0019465:102178-102197 | None:intergenic | 25.0% |
!! | TGTTATTTGTGACAATGATT+AGG | - | tig0019465:102340-102359 | Msa1374100:intron | 25.0% |
! | TACAACATTTAGTGATTGTA+GGG | + | tig0019465:102724-102743 | None:intergenic | 25.0% |
TCTTCAAATAAAGGTTCAAC+TGG | + | tig0019465:101606-101625 | None:intergenic | 30.0% | |
! | GCTTGAACAAAGAATTTTGT+TGG | + | tig0019465:101715-101734 | None:intergenic | 30.0% |
TGAACTCATAATCAGAATGT+GGG | + | tig0019465:101870-101889 | None:intergenic | 30.0% | |
TTGAACTCATAATCAGAATG+TGG | + | tig0019465:101871-101890 | None:intergenic | 30.0% | |
ACAAATGACACCTGAATATT+TGG | + | tig0019465:102053-102072 | None:intergenic | 30.0% | |
!! | AAATATTCAGGTGTCATTTG+TGG | - | tig0019465:102052-102071 | Msa1374100:intron | 30.0% |
CAATAGTGCATTAATGTCAT+TGG | - | tig0019465:102182-102201 | Msa1374100:intron | 30.0% | |
TATTTGTGACAATGATTAGG+AGG | - | tig0019465:102343-102362 | Msa1374100:intron | 30.0% | |
ATTTGTGACAATGATTAGGA+GGG | - | tig0019465:102344-102363 | Msa1374100:intron | 30.0% | |
!! | ATAAATCTTTGCTGGTTTGA+AGG | - | tig0019465:102419-102438 | Msa1374100:intron | 30.0% |
ACACAAAGAAAGCCTATTAA+TGG | + | tig0019465:102507-102526 | None:intergenic | 30.0% | |
! | CTTTATTTCACTTCCTTCTT+TGG | + | tig0019465:102575-102594 | None:intergenic | 30.0% |
CAAAGAAGGAAGTGAAATAA+AGG | - | tig0019465:102573-102592 | Msa1374100:intron | 30.0% | |
AAGGAAGTGAAATAAAGGAA+AGG | - | tig0019465:102578-102597 | Msa1374100:intron | 30.0% | |
GGAATTGCTTATGTTACATA+CGG | - | tig0019465:102599-102618 | Msa1374100:intron | 30.0% | |
GAATTGCTTATGTTACATAC+GGG | - | tig0019465:102600-102619 | Msa1374100:intron | 30.0% | |
CTACAACATTTAGTGATTGT+AGG | + | tig0019465:102725-102744 | None:intergenic | 30.0% | |
CAATCACTAAATGTTGTAGT+CGG | - | tig0019465:102726-102745 | Msa1374100:intron | 30.0% | |
ATCTTTCTATTTGCTCAAGT+TGG | - | tig0019465:102751-102770 | Msa1374100:intron | 30.0% | |
ATTATTCAATGACAGGTTCT+TGG | - | tig0019465:102854-102873 | Msa1374100:CDS | 30.0% | |
TTATTCAATGACAGGTTCTT+GGG | - | tig0019465:102855-102874 | Msa1374100:CDS | 30.0% | |
TCTTCAAATAAAGGTTCAAC+TGG | + | tig0019465:101606-101625 | None:intergenic | 30.0% | |
! | GCTTGAACAAAGAATTTTGT+TGG | + | tig0019465:101715-101734 | None:intergenic | 30.0% |
TGAACTCATAATCAGAATGT+GGG | + | tig0019465:101870-101889 | None:intergenic | 30.0% | |
TTGAACTCATAATCAGAATG+TGG | + | tig0019465:101871-101890 | None:intergenic | 30.0% | |
ACAAATGACACCTGAATATT+TGG | + | tig0019465:102053-102072 | None:intergenic | 30.0% | |
!! | AAATATTCAGGTGTCATTTG+TGG | - | tig0019465:102052-102071 | Msa1374100:intron | 30.0% |
CAATAGTGCATTAATGTCAT+TGG | - | tig0019465:102182-102201 | Msa1374100:intron | 30.0% | |
TATTTGTGACAATGATTAGG+AGG | - | tig0019465:102343-102362 | Msa1374100:intron | 30.0% | |
ATTTGTGACAATGATTAGGA+GGG | - | tig0019465:102344-102363 | Msa1374100:intron | 30.0% | |
!! | ATAAATCTTTGCTGGTTTGA+AGG | - | tig0019465:102419-102438 | Msa1374100:intron | 30.0% |
ACACAAAGAAAGCCTATTAA+TGG | + | tig0019465:102507-102526 | None:intergenic | 30.0% | |
! | CTTTATTTCACTTCCTTCTT+TGG | + | tig0019465:102575-102594 | None:intergenic | 30.0% |
CAAAGAAGGAAGTGAAATAA+AGG | - | tig0019465:102573-102592 | Msa1374100:intron | 30.0% | |
AAGGAAGTGAAATAAAGGAA+AGG | - | tig0019465:102578-102597 | Msa1374100:intron | 30.0% | |
GGAATTGCTTATGTTACATA+CGG | - | tig0019465:102599-102618 | Msa1374100:intron | 30.0% | |
GAATTGCTTATGTTACATAC+GGG | - | tig0019465:102600-102619 | Msa1374100:intron | 30.0% | |
CTACAACATTTAGTGATTGT+AGG | + | tig0019465:102725-102744 | None:intergenic | 30.0% | |
CAATCACTAAATGTTGTAGT+CGG | - | tig0019465:102726-102745 | Msa1374100:intron | 30.0% | |
ATCTTTCTATTTGCTCAAGT+TGG | - | tig0019465:102751-102770 | Msa1374100:intron | 30.0% | |
ATTATTCAATGACAGGTTCT+TGG | - | tig0019465:102854-102873 | Msa1374100:CDS | 30.0% | |
TTATTCAATGACAGGTTCTT+GGG | - | tig0019465:102855-102874 | Msa1374100:CDS | 30.0% | |
CAGATATGTTGTGGAATGAA+TGG | - | tig0019465:101819-101838 | Msa1374100:CDS | 35.0% | |
AAACTTCAATCTGCCATGTT+TGG | - | tig0019465:102002-102021 | Msa1374100:intron | 35.0% | |
CATTGAACATGCTTGTAACT+TGG | - | tig0019465:102298-102317 | Msa1374100:intron | 35.0% | |
GTTAGCTGATAAATCTTTGC+TGG | - | tig0019465:102411-102430 | Msa1374100:intron | 35.0% | |
GATTCATTGTTCATGGAAAG+AGG | + | tig0019465:102551-102570 | None:intergenic | 35.0% | |
! | CTTTGGAGATTCATTGTTCA+TGG | + | tig0019465:102558-102577 | None:intergenic | 35.0% |
GAACAATGAATCTCCAAAGA+AGG | - | tig0019465:102559-102578 | Msa1374100:intron | 35.0% | |
!! | TATTTGCTCAAGTTGGAACA+AGG | - | tig0019465:102758-102777 | Msa1374100:intron | 35.0% |
!! | ATTTGCTCAAGTTGGAACAA+GGG | - | tig0019465:102759-102778 | Msa1374100:intron | 35.0% |
CACTGACATTATTCAATGAC+AGG | - | tig0019465:102847-102866 | Msa1374100:CDS | 35.0% | |
CAGATATGTTGTGGAATGAA+TGG | - | tig0019465:101819-101838 | Msa1374100:CDS | 35.0% | |
AAACTTCAATCTGCCATGTT+TGG | - | tig0019465:102002-102021 | Msa1374100:intron | 35.0% | |
CATTGAACATGCTTGTAACT+TGG | - | tig0019465:102298-102317 | Msa1374100:intron | 35.0% | |
GTTAGCTGATAAATCTTTGC+TGG | - | tig0019465:102411-102430 | Msa1374100:intron | 35.0% | |
GATTCATTGTTCATGGAAAG+AGG | + | tig0019465:102551-102570 | None:intergenic | 35.0% | |
! | CTTTGGAGATTCATTGTTCA+TGG | + | tig0019465:102558-102577 | None:intergenic | 35.0% |
GAACAATGAATCTCCAAAGA+AGG | - | tig0019465:102559-102578 | Msa1374100:intron | 35.0% | |
!! | TATTTGCTCAAGTTGGAACA+AGG | - | tig0019465:102758-102777 | Msa1374100:intron | 35.0% |
!! | ATTTGCTCAAGTTGGAACAA+GGG | - | tig0019465:102759-102778 | Msa1374100:intron | 35.0% |
CACTGACATTATTCAATGAC+AGG | - | tig0019465:102847-102866 | Msa1374100:CDS | 35.0% | |
TGCTTGTGTCAGATATGTTG+TGG | - | tig0019465:101810-101829 | Msa1374100:CDS | 40.0% | |
! | TTCATAGGGCTTTTGCTTTC+TGG | + | tig0019465:101912-101931 | None:intergenic | 40.0% |
CTCCATGTCTCCAAATATTC+AGG | - | tig0019465:102040-102059 | Msa1374100:intron | 40.0% | |
CACCTGAATATTTGGAGACA+TGG | + | tig0019465:102045-102064 | None:intergenic | 40.0% | |
! | ACTGCAAACTTGTTCTCCAA+GGG | + | tig0019465:102377-102396 | None:intergenic | 40.0% |
TCAGGGAATTGATCTACAAG+AGG | - | tig0019465:102642-102661 | Msa1374100:intron | 40.0% | |
CAGGGAATTGATCTACAAGA+GGG | - | tig0019465:102643-102662 | Msa1374100:intron | 40.0% | |
AGGGAATTGATCTACAAGAG+GGG | - | tig0019465:102644-102663 | Msa1374100:intron | 40.0% | |
TTGATCTACAAGAGGGGATA+CGG | - | tig0019465:102650-102669 | Msa1374100:intron | 40.0% | |
ACAAGCAGATTTCATCGAAC+AGG | - | tig0019465:102681-102700 | Msa1374100:intron | 40.0% | |
TCGAACAGGTTTGTCTGATT+TGG | - | tig0019465:102695-102714 | Msa1374100:intron | 40.0% | |
TGCTTGTGTCAGATATGTTG+TGG | - | tig0019465:101810-101829 | Msa1374100:CDS | 40.0% | |
! | TTCATAGGGCTTTTGCTTTC+TGG | + | tig0019465:101912-101931 | None:intergenic | 40.0% |
CTCCATGTCTCCAAATATTC+AGG | - | tig0019465:102040-102059 | Msa1374100:intron | 40.0% | |
CACCTGAATATTTGGAGACA+TGG | + | tig0019465:102045-102064 | None:intergenic | 40.0% | |
! | ACTGCAAACTTGTTCTCCAA+GGG | + | tig0019465:102377-102396 | None:intergenic | 40.0% |
TCAGGGAATTGATCTACAAG+AGG | - | tig0019465:102642-102661 | Msa1374100:intron | 40.0% | |
CAGGGAATTGATCTACAAGA+GGG | - | tig0019465:102643-102662 | Msa1374100:intron | 40.0% | |
AGGGAATTGATCTACAAGAG+GGG | - | tig0019465:102644-102663 | Msa1374100:intron | 40.0% | |
TTGATCTACAAGAGGGGATA+CGG | - | tig0019465:102650-102669 | Msa1374100:intron | 40.0% | |
ACAAGCAGATTTCATCGAAC+AGG | - | tig0019465:102681-102700 | Msa1374100:intron | 40.0% | |
TCGAACAGGTTTGTCTGATT+TGG | - | tig0019465:102695-102714 | Msa1374100:intron | 40.0% | |
! | CAATCTGCCATGTTTGGTGA+AGG | - | tig0019465:102008-102027 | Msa1374100:intron | 45.0% |
AAGAGGACCTTCACCAAACA+TGG | + | tig0019465:102018-102037 | None:intergenic | 45.0% | |
TTTGGAGACATGGAGTCAAG+AGG | + | tig0019465:102035-102054 | None:intergenic | 45.0% | |
TTAGGAGGGAACTTATCCCT+TGG | - | tig0019465:102358-102377 | Msa1374100:intron | 45.0% | |
! | GACTGCAAACTTGTTCTCCA+AGG | + | tig0019465:102378-102397 | None:intergenic | 45.0% |
TGGAGAACAAGTTTGCAGTC+AGG | - | tig0019465:102378-102397 | Msa1374100:intron | 45.0% | |
! | CAATCTGCCATGTTTGGTGA+AGG | - | tig0019465:102008-102027 | Msa1374100:intron | 45.0% |
AAGAGGACCTTCACCAAACA+TGG | + | tig0019465:102018-102037 | None:intergenic | 45.0% | |
TTTGGAGACATGGAGTCAAG+AGG | + | tig0019465:102035-102054 | None:intergenic | 45.0% | |
TTAGGAGGGAACTTATCCCT+TGG | - | tig0019465:102358-102377 | Msa1374100:intron | 45.0% | |
! | GACTGCAAACTTGTTCTCCA+AGG | + | tig0019465:102378-102397 | None:intergenic | 45.0% |
TGGAGAACAAGTTTGCAGTC+AGG | - | tig0019465:102378-102397 | Msa1374100:intron | 45.0% | |
!! | AAGAAATATTTAAATTTAAA+CGG | - | tig0019465:102141-102160 | Msa1374100:intron | 5.0% |
!! | AAGAAATATTTAAATTTAAA+CGG | - | tig0019465:102141-102160 | Msa1374100:intron | 5.0% |
! | TGTTTCTGACCTCTGCGAGA+AGG | - | tig0019465:101843-101862 | Msa1374100:CDS | 50.0% |
!! | ACCCTAATCTGAAGAGCGTC+AGG | - | tig0019465:102624-102643 | Msa1374100:intron | 50.0% |
CCCTGACGCTCTTCAGATTA+GGG | + | tig0019465:102628-102647 | None:intergenic | 50.0% | |
!! | CCCTAATCTGAAGAGCGTCA+GGG | - | tig0019465:102625-102644 | Msa1374100:intron | 50.0% |
TCCCTGACGCTCTTCAGATT+AGG | + | tig0019465:102629-102648 | None:intergenic | 50.0% | |
TGACAGGTTCTTGGGAAGCA+CGG | - | tig0019465:102863-102882 | Msa1374100:CDS | 50.0% | |
! | TGTTTCTGACCTCTGCGAGA+AGG | - | tig0019465:101843-101862 | Msa1374100:CDS | 50.0% |
!! | ACCCTAATCTGAAGAGCGTC+AGG | - | tig0019465:102624-102643 | Msa1374100:intron | 50.0% |
CCCTGACGCTCTTCAGATTA+GGG | + | tig0019465:102628-102647 | None:intergenic | 50.0% | |
!! | CCCTAATCTGAAGAGCGTCA+GGG | - | tig0019465:102625-102644 | Msa1374100:intron | 50.0% |
TCCCTGACGCTCTTCAGATT+AGG | + | tig0019465:102629-102648 | None:intergenic | 50.0% | |
TGACAGGTTCTTGGGAAGCA+CGG | - | tig0019465:102863-102882 | Msa1374100:CDS | 50.0% | |
AATGTGGGACCTTCTCGCAG+AGG | + | tig0019465:101855-101874 | None:intergenic | 55.0% | |
CAGTCAGCGTACACGCAATC+TGG | + | tig0019465:102808-102827 | None:intergenic | 55.0% | |
AATGTGGGACCTTCTCGCAG+AGG | + | tig0019465:101855-101874 | None:intergenic | 55.0% | |
CAGTCAGCGTACACGCAATC+TGG | + | tig0019465:102808-102827 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019465 | gene | 101573 | 102908 | 101573 | ID=Msa1374100;Name=Msa1374100 |
tig0019465 | mRNA | 101573 | 102908 | 101573 | ID=Msa1374100-mRNA-1;Parent=Msa1374100;Name=Msa1374100-mRNA-1;_AED=0.56;_eAED=0.69;_QI=0|0|0|1|0|0|3|0|70 |
tig0019465 | exon | 102844 | 102908 | 102844 | ID=Msa1374100-mRNA-1:exon:3763;Parent=Msa1374100-mRNA-1 |
tig0019465 | exon | 101779 | 101886 | 101779 | ID=Msa1374100-mRNA-1:exon:3762;Parent=Msa1374100-mRNA-1 |
tig0019465 | exon | 101573 | 101612 | 101573 | ID=Msa1374100-mRNA-1:exon:3761;Parent=Msa1374100-mRNA-1 |
tig0019465 | CDS | 102844 | 102908 | 102844 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
tig0019465 | CDS | 101779 | 101886 | 101779 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
tig0019465 | CDS | 101573 | 101612 | 101573 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
Gene Sequence |
Protein sequence |