Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374100 | CAD1832007.1 | 68.627 | 51 | 9 | 1 | 27 | 70 | 130 | 180 | 5.89e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374100 | A0A6V7PMG1 | 68.627 | 51 | 9 | 1 | 27 | 70 | 130 | 180 | 2.81e-12 | 68.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1374100 | Msa1382600 | 0.896354 | 3.999884e-76 | -8.615850e-47 |
| Msa1374100 | Msa1451620 | -0.806602 | 7.595893e-50 | -8.615850e-47 |
| Msa0662650 | Msa1374100 | 0.800005 | 1.765517e-48 | -8.615850e-47 |
| Msa1233890 | Msa1374100 | 0.814782 | 1.293080e-51 | -8.615850e-47 |
| Msa1239530 | Msa1374100 | 0.805798 | 1.121507e-49 | -8.615850e-47 |
| Msa0406880 | Msa1374100 | 0.812487 | 4.135981e-51 | -8.615850e-47 |
| Msa0457880 | Msa1374100 | 0.803892 | 2.806032e-49 | -8.615850e-47 |
| Msa1035310 | Msa1374100 | 0.802611 | 5.167232e-49 | -8.615850e-47 |
| Msa0279790 | Msa1374100 | 0.800610 | 1.329428e-48 | -8.615850e-47 |
| Msa0288100 | Msa1374100 | 0.803057 | 4.181027e-49 | -8.615850e-47 |
| Msa0350990 | Msa1374100 | 0.843923 | 1.039413e-58 | -8.615850e-47 |
| Msa0351030 | Msa1374100 | 0.841090 | 5.865185e-58 | -8.615850e-47 |
| Msa0351100 | Msa1374100 | 0.838130 | 3.451860e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1374100 | MtrunA17_Chr1g0155331 | 96.296 | 27 | 1 | 0 | 27 | 53 | 135 | 161 | 2.80e-12 | 59.3 |
| Msa1374100 | MtrunA17_Chr2g0298841 | 96.296 | 27 | 1 | 0 | 27 | 53 | 135 | 161 | 2.80e-12 | 59.3 |
| Msa1374100 | MtrunA17_Chr4g0002321 | 92.593 | 27 | 2 | 0 | 27 | 53 | 134 | 160 | 8.41e-12 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTCAATGACAGGTTCT+TGG | 0.316176 | tig0019465:-101605 | Msa1374100:intron |
| CCCTGACGCTCTTCAGATTA+GGG | 0.318959 | tig0019465:+101834 | None:intergenic |
| AATAATTACTGAAATCCTTA+TGG | 0.356825 | tig0019465:+102879 | None:intergenic |
| TCTTCAAATAAAGGTTCAAC+TGG | 0.368005 | tig0019465:+102856 | None:intergenic |
| TCCCTGACGCTCTTCAGATT+AGG | 0.391787 | tig0019465:+101833 | None:intergenic |
| ACCCTAATCTGAAGAGCGTC+AGG | 0.410603 | tig0019465:-101835 | Msa1374100:CDS |
| ACAAGCAGATTTCATCGAAC+AGG | 0.426738 | tig0019465:-101778 | Msa1374100:intron |
| TTATTCAATGACAGGTTCTT+GGG | 0.454218 | tig0019465:-101604 | Msa1374100:intron |
| TTGATCTACAAGAGGGGATA+CGG | 0.470817 | tig0019465:-101809 | Msa1374100:CDS |
| GGAATTGCTTATGTTACATA+CGG | 0.485132 | tig0019465:-101860 | Msa1374100:CDS |
| GTTCGATGATGAATGCCATA+AGG | 0.503644 | tig0019465:-102894 | None:intergenic |
| TATTTGAAGAATGTGAAAAG+AGG | 0.510086 | tig0019465:-102843 | Msa1374100:intron |
| GAATTGCTTATGTTACATAC+GGG | 0.584032 | tig0019465:-101859 | Msa1374100:CDS |
| TGACAGGTTCTTGGGAAGCA+CGG | 0.610853 | tig0019465:-101596 | Msa1374100:intron |
| CAGGGAATTGATCTACAAGA+GGG | 0.612367 | tig0019465:-101816 | Msa1374100:CDS |
| TCAGGGAATTGATCTACAAG+AGG | 0.639447 | tig0019465:-101817 | Msa1374100:CDS |
| CCCTAATCTGAAGAGCGTCA+GGG | 0.672345 | tig0019465:-101834 | Msa1374100:CDS |
| AGGGAATTGATCTACAAGAG+GGG | 0.716288 | tig0019465:-101815 | Msa1374100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAATTAGAAACTAATT+TGG | + | tig0019465:101660-101679 | None:intergenic | 15.0% |
| !!! | TTTTTTACAATAAGTTAGAT+TGG | + | tig0019465:102220-102239 | None:intergenic | 15.0% |
| !! | AATCTAACTTATTGTAAAAA+AGG | - | tig0019465:102219-102238 | Msa1374100:intron | 15.0% |
| !!! | TGAATATTTTAACCATTAAT+AGG | - | tig0019465:102492-102511 | Msa1374100:intron | 15.0% |
| !! | ATGTAAATTAGAAACTAATT+TGG | + | tig0019465:101660-101679 | None:intergenic | 15.0% |
| !!! | TTTTTTACAATAAGTTAGAT+TGG | + | tig0019465:102220-102239 | None:intergenic | 15.0% |
| !! | AATCTAACTTATTGTAAAAA+AGG | - | tig0019465:102219-102238 | Msa1374100:intron | 15.0% |
| !!! | TGAATATTTTAACCATTAAT+AGG | - | tig0019465:102492-102511 | Msa1374100:intron | 15.0% |
| !! | AATAATTACTGAAATCCTTA+TGG | + | tig0019465:101583-101602 | None:intergenic | 20.0% |
| !!! | TTTTCACATTCTTCAAATAA+AGG | + | tig0019465:101615-101634 | None:intergenic | 20.0% |
| !! | CAATCATAAAAACTTTCATA+GGG | + | tig0019465:101926-101945 | None:intergenic | 20.0% |
| !! | ATTCATAAAAACTTTGCATA+GGG | + | tig0019465:101958-101977 | None:intergenic | 20.0% |
| !! | AAACAAAAACTATTGAACAT+TGG | - | tig0019465:102106-102125 | Msa1374100:intron | 20.0% |
| !! | ATAAGTTTACAAAACAACAA+AGG | + | tig0019465:102245-102264 | None:intergenic | 20.0% |
| !! | AATAATTACTGAAATCCTTA+TGG | + | tig0019465:101583-101602 | None:intergenic | 20.0% |
| !!! | TTTTCACATTCTTCAAATAA+AGG | + | tig0019465:101615-101634 | None:intergenic | 20.0% |
| !! | CAATCATAAAAACTTTCATA+GGG | + | tig0019465:101926-101945 | None:intergenic | 20.0% |
| !! | ATTCATAAAAACTTTGCATA+GGG | + | tig0019465:101958-101977 | None:intergenic | 20.0% |
| !! | AAACAAAAACTATTGAACAT+TGG | - | tig0019465:102106-102125 | Msa1374100:intron | 20.0% |
| !! | ATAAGTTTACAAAACAACAA+AGG | + | tig0019465:102245-102264 | None:intergenic | 20.0% |
| ! | TATTTGAAGAATGTGAAAAG+AGG | - | tig0019465:101616-101635 | Msa1374100:intron | 25.0% |
| ! | TGTGAATACATCTATTCTTT+AGG | - | tig0019465:101746-101765 | Msa1374100:intron | 25.0% |
| !!! | TACATCTATTCTTTAGGATT+AGG | - | tig0019465:101752-101771 | Msa1374100:intron | 25.0% |
| ! | AACAGCATTATGTAATACAT+AGG | + | tig0019465:101784-101803 | None:intergenic | 25.0% |
| ! | GCAATCATAAAAACTTTCAT+AGG | + | tig0019465:101927-101946 | None:intergenic | 25.0% |
| ! | CATTCATAAAAACTTTGCAT+AGG | + | tig0019465:101959-101978 | None:intergenic | 25.0% |
| !! | CTATGCAAAGTTTTTATGAA+TGG | - | tig0019465:101957-101976 | Msa1374100:intron | 25.0% |
| ! | CATTAATGCACTATTGTTAA+TGG | + | tig0019465:102178-102197 | None:intergenic | 25.0% |
| !! | TGTTATTTGTGACAATGATT+AGG | - | tig0019465:102340-102359 | Msa1374100:intron | 25.0% |
| ! | TACAACATTTAGTGATTGTA+GGG | + | tig0019465:102724-102743 | None:intergenic | 25.0% |
| ! | TATTTGAAGAATGTGAAAAG+AGG | - | tig0019465:101616-101635 | Msa1374100:intron | 25.0% |
| ! | TGTGAATACATCTATTCTTT+AGG | - | tig0019465:101746-101765 | Msa1374100:intron | 25.0% |
| !!! | TACATCTATTCTTTAGGATT+AGG | - | tig0019465:101752-101771 | Msa1374100:intron | 25.0% |
| ! | AACAGCATTATGTAATACAT+AGG | + | tig0019465:101784-101803 | None:intergenic | 25.0% |
| ! | GCAATCATAAAAACTTTCAT+AGG | + | tig0019465:101927-101946 | None:intergenic | 25.0% |
| ! | CATTCATAAAAACTTTGCAT+AGG | + | tig0019465:101959-101978 | None:intergenic | 25.0% |
| !! | CTATGCAAAGTTTTTATGAA+TGG | - | tig0019465:101957-101976 | Msa1374100:intron | 25.0% |
| ! | CATTAATGCACTATTGTTAA+TGG | + | tig0019465:102178-102197 | None:intergenic | 25.0% |
| !! | TGTTATTTGTGACAATGATT+AGG | - | tig0019465:102340-102359 | Msa1374100:intron | 25.0% |
| ! | TACAACATTTAGTGATTGTA+GGG | + | tig0019465:102724-102743 | None:intergenic | 25.0% |
| TCTTCAAATAAAGGTTCAAC+TGG | + | tig0019465:101606-101625 | None:intergenic | 30.0% | |
| ! | GCTTGAACAAAGAATTTTGT+TGG | + | tig0019465:101715-101734 | None:intergenic | 30.0% |
| TGAACTCATAATCAGAATGT+GGG | + | tig0019465:101870-101889 | None:intergenic | 30.0% | |
| TTGAACTCATAATCAGAATG+TGG | + | tig0019465:101871-101890 | None:intergenic | 30.0% | |
| ACAAATGACACCTGAATATT+TGG | + | tig0019465:102053-102072 | None:intergenic | 30.0% | |
| !! | AAATATTCAGGTGTCATTTG+TGG | - | tig0019465:102052-102071 | Msa1374100:intron | 30.0% |
| CAATAGTGCATTAATGTCAT+TGG | - | tig0019465:102182-102201 | Msa1374100:intron | 30.0% | |
| TATTTGTGACAATGATTAGG+AGG | - | tig0019465:102343-102362 | Msa1374100:intron | 30.0% | |
| ATTTGTGACAATGATTAGGA+GGG | - | tig0019465:102344-102363 | Msa1374100:intron | 30.0% | |
| !! | ATAAATCTTTGCTGGTTTGA+AGG | - | tig0019465:102419-102438 | Msa1374100:intron | 30.0% |
| ACACAAAGAAAGCCTATTAA+TGG | + | tig0019465:102507-102526 | None:intergenic | 30.0% | |
| ! | CTTTATTTCACTTCCTTCTT+TGG | + | tig0019465:102575-102594 | None:intergenic | 30.0% |
| CAAAGAAGGAAGTGAAATAA+AGG | - | tig0019465:102573-102592 | Msa1374100:intron | 30.0% | |
| AAGGAAGTGAAATAAAGGAA+AGG | - | tig0019465:102578-102597 | Msa1374100:intron | 30.0% | |
| GGAATTGCTTATGTTACATA+CGG | - | tig0019465:102599-102618 | Msa1374100:intron | 30.0% | |
| GAATTGCTTATGTTACATAC+GGG | - | tig0019465:102600-102619 | Msa1374100:intron | 30.0% | |
| CTACAACATTTAGTGATTGT+AGG | + | tig0019465:102725-102744 | None:intergenic | 30.0% | |
| CAATCACTAAATGTTGTAGT+CGG | - | tig0019465:102726-102745 | Msa1374100:intron | 30.0% | |
| ATCTTTCTATTTGCTCAAGT+TGG | - | tig0019465:102751-102770 | Msa1374100:intron | 30.0% | |
| ATTATTCAATGACAGGTTCT+TGG | - | tig0019465:102854-102873 | Msa1374100:CDS | 30.0% | |
| TTATTCAATGACAGGTTCTT+GGG | - | tig0019465:102855-102874 | Msa1374100:CDS | 30.0% | |
| TCTTCAAATAAAGGTTCAAC+TGG | + | tig0019465:101606-101625 | None:intergenic | 30.0% | |
| ! | GCTTGAACAAAGAATTTTGT+TGG | + | tig0019465:101715-101734 | None:intergenic | 30.0% |
| TGAACTCATAATCAGAATGT+GGG | + | tig0019465:101870-101889 | None:intergenic | 30.0% | |
| TTGAACTCATAATCAGAATG+TGG | + | tig0019465:101871-101890 | None:intergenic | 30.0% | |
| ACAAATGACACCTGAATATT+TGG | + | tig0019465:102053-102072 | None:intergenic | 30.0% | |
| !! | AAATATTCAGGTGTCATTTG+TGG | - | tig0019465:102052-102071 | Msa1374100:intron | 30.0% |
| CAATAGTGCATTAATGTCAT+TGG | - | tig0019465:102182-102201 | Msa1374100:intron | 30.0% | |
| TATTTGTGACAATGATTAGG+AGG | - | tig0019465:102343-102362 | Msa1374100:intron | 30.0% | |
| ATTTGTGACAATGATTAGGA+GGG | - | tig0019465:102344-102363 | Msa1374100:intron | 30.0% | |
| !! | ATAAATCTTTGCTGGTTTGA+AGG | - | tig0019465:102419-102438 | Msa1374100:intron | 30.0% |
| ACACAAAGAAAGCCTATTAA+TGG | + | tig0019465:102507-102526 | None:intergenic | 30.0% | |
| ! | CTTTATTTCACTTCCTTCTT+TGG | + | tig0019465:102575-102594 | None:intergenic | 30.0% |
| CAAAGAAGGAAGTGAAATAA+AGG | - | tig0019465:102573-102592 | Msa1374100:intron | 30.0% | |
| AAGGAAGTGAAATAAAGGAA+AGG | - | tig0019465:102578-102597 | Msa1374100:intron | 30.0% | |
| GGAATTGCTTATGTTACATA+CGG | - | tig0019465:102599-102618 | Msa1374100:intron | 30.0% | |
| GAATTGCTTATGTTACATAC+GGG | - | tig0019465:102600-102619 | Msa1374100:intron | 30.0% | |
| CTACAACATTTAGTGATTGT+AGG | + | tig0019465:102725-102744 | None:intergenic | 30.0% | |
| CAATCACTAAATGTTGTAGT+CGG | - | tig0019465:102726-102745 | Msa1374100:intron | 30.0% | |
| ATCTTTCTATTTGCTCAAGT+TGG | - | tig0019465:102751-102770 | Msa1374100:intron | 30.0% | |
| ATTATTCAATGACAGGTTCT+TGG | - | tig0019465:102854-102873 | Msa1374100:CDS | 30.0% | |
| TTATTCAATGACAGGTTCTT+GGG | - | tig0019465:102855-102874 | Msa1374100:CDS | 30.0% | |
| CAGATATGTTGTGGAATGAA+TGG | - | tig0019465:101819-101838 | Msa1374100:CDS | 35.0% | |
| AAACTTCAATCTGCCATGTT+TGG | - | tig0019465:102002-102021 | Msa1374100:intron | 35.0% | |
| CATTGAACATGCTTGTAACT+TGG | - | tig0019465:102298-102317 | Msa1374100:intron | 35.0% | |
| GTTAGCTGATAAATCTTTGC+TGG | - | tig0019465:102411-102430 | Msa1374100:intron | 35.0% | |
| GATTCATTGTTCATGGAAAG+AGG | + | tig0019465:102551-102570 | None:intergenic | 35.0% | |
| ! | CTTTGGAGATTCATTGTTCA+TGG | + | tig0019465:102558-102577 | None:intergenic | 35.0% |
| GAACAATGAATCTCCAAAGA+AGG | - | tig0019465:102559-102578 | Msa1374100:intron | 35.0% | |
| !! | TATTTGCTCAAGTTGGAACA+AGG | - | tig0019465:102758-102777 | Msa1374100:intron | 35.0% |
| !! | ATTTGCTCAAGTTGGAACAA+GGG | - | tig0019465:102759-102778 | Msa1374100:intron | 35.0% |
| CACTGACATTATTCAATGAC+AGG | - | tig0019465:102847-102866 | Msa1374100:CDS | 35.0% | |
| CAGATATGTTGTGGAATGAA+TGG | - | tig0019465:101819-101838 | Msa1374100:CDS | 35.0% | |
| AAACTTCAATCTGCCATGTT+TGG | - | tig0019465:102002-102021 | Msa1374100:intron | 35.0% | |
| CATTGAACATGCTTGTAACT+TGG | - | tig0019465:102298-102317 | Msa1374100:intron | 35.0% | |
| GTTAGCTGATAAATCTTTGC+TGG | - | tig0019465:102411-102430 | Msa1374100:intron | 35.0% | |
| GATTCATTGTTCATGGAAAG+AGG | + | tig0019465:102551-102570 | None:intergenic | 35.0% | |
| ! | CTTTGGAGATTCATTGTTCA+TGG | + | tig0019465:102558-102577 | None:intergenic | 35.0% |
| GAACAATGAATCTCCAAAGA+AGG | - | tig0019465:102559-102578 | Msa1374100:intron | 35.0% | |
| !! | TATTTGCTCAAGTTGGAACA+AGG | - | tig0019465:102758-102777 | Msa1374100:intron | 35.0% |
| !! | ATTTGCTCAAGTTGGAACAA+GGG | - | tig0019465:102759-102778 | Msa1374100:intron | 35.0% |
| CACTGACATTATTCAATGAC+AGG | - | tig0019465:102847-102866 | Msa1374100:CDS | 35.0% | |
| TGCTTGTGTCAGATATGTTG+TGG | - | tig0019465:101810-101829 | Msa1374100:CDS | 40.0% | |
| ! | TTCATAGGGCTTTTGCTTTC+TGG | + | tig0019465:101912-101931 | None:intergenic | 40.0% |
| CTCCATGTCTCCAAATATTC+AGG | - | tig0019465:102040-102059 | Msa1374100:intron | 40.0% | |
| CACCTGAATATTTGGAGACA+TGG | + | tig0019465:102045-102064 | None:intergenic | 40.0% | |
| ! | ACTGCAAACTTGTTCTCCAA+GGG | + | tig0019465:102377-102396 | None:intergenic | 40.0% |
| TCAGGGAATTGATCTACAAG+AGG | - | tig0019465:102642-102661 | Msa1374100:intron | 40.0% | |
| CAGGGAATTGATCTACAAGA+GGG | - | tig0019465:102643-102662 | Msa1374100:intron | 40.0% | |
| AGGGAATTGATCTACAAGAG+GGG | - | tig0019465:102644-102663 | Msa1374100:intron | 40.0% | |
| TTGATCTACAAGAGGGGATA+CGG | - | tig0019465:102650-102669 | Msa1374100:intron | 40.0% | |
| ACAAGCAGATTTCATCGAAC+AGG | - | tig0019465:102681-102700 | Msa1374100:intron | 40.0% | |
| TCGAACAGGTTTGTCTGATT+TGG | - | tig0019465:102695-102714 | Msa1374100:intron | 40.0% | |
| TGCTTGTGTCAGATATGTTG+TGG | - | tig0019465:101810-101829 | Msa1374100:CDS | 40.0% | |
| ! | TTCATAGGGCTTTTGCTTTC+TGG | + | tig0019465:101912-101931 | None:intergenic | 40.0% |
| CTCCATGTCTCCAAATATTC+AGG | - | tig0019465:102040-102059 | Msa1374100:intron | 40.0% | |
| CACCTGAATATTTGGAGACA+TGG | + | tig0019465:102045-102064 | None:intergenic | 40.0% | |
| ! | ACTGCAAACTTGTTCTCCAA+GGG | + | tig0019465:102377-102396 | None:intergenic | 40.0% |
| TCAGGGAATTGATCTACAAG+AGG | - | tig0019465:102642-102661 | Msa1374100:intron | 40.0% | |
| CAGGGAATTGATCTACAAGA+GGG | - | tig0019465:102643-102662 | Msa1374100:intron | 40.0% | |
| AGGGAATTGATCTACAAGAG+GGG | - | tig0019465:102644-102663 | Msa1374100:intron | 40.0% | |
| TTGATCTACAAGAGGGGATA+CGG | - | tig0019465:102650-102669 | Msa1374100:intron | 40.0% | |
| ACAAGCAGATTTCATCGAAC+AGG | - | tig0019465:102681-102700 | Msa1374100:intron | 40.0% | |
| TCGAACAGGTTTGTCTGATT+TGG | - | tig0019465:102695-102714 | Msa1374100:intron | 40.0% | |
| ! | CAATCTGCCATGTTTGGTGA+AGG | - | tig0019465:102008-102027 | Msa1374100:intron | 45.0% |
| AAGAGGACCTTCACCAAACA+TGG | + | tig0019465:102018-102037 | None:intergenic | 45.0% | |
| TTTGGAGACATGGAGTCAAG+AGG | + | tig0019465:102035-102054 | None:intergenic | 45.0% | |
| TTAGGAGGGAACTTATCCCT+TGG | - | tig0019465:102358-102377 | Msa1374100:intron | 45.0% | |
| ! | GACTGCAAACTTGTTCTCCA+AGG | + | tig0019465:102378-102397 | None:intergenic | 45.0% |
| TGGAGAACAAGTTTGCAGTC+AGG | - | tig0019465:102378-102397 | Msa1374100:intron | 45.0% | |
| ! | CAATCTGCCATGTTTGGTGA+AGG | - | tig0019465:102008-102027 | Msa1374100:intron | 45.0% |
| AAGAGGACCTTCACCAAACA+TGG | + | tig0019465:102018-102037 | None:intergenic | 45.0% | |
| TTTGGAGACATGGAGTCAAG+AGG | + | tig0019465:102035-102054 | None:intergenic | 45.0% | |
| TTAGGAGGGAACTTATCCCT+TGG | - | tig0019465:102358-102377 | Msa1374100:intron | 45.0% | |
| ! | GACTGCAAACTTGTTCTCCA+AGG | + | tig0019465:102378-102397 | None:intergenic | 45.0% |
| TGGAGAACAAGTTTGCAGTC+AGG | - | tig0019465:102378-102397 | Msa1374100:intron | 45.0% | |
| !! | AAGAAATATTTAAATTTAAA+CGG | - | tig0019465:102141-102160 | Msa1374100:intron | 5.0% |
| !! | AAGAAATATTTAAATTTAAA+CGG | - | tig0019465:102141-102160 | Msa1374100:intron | 5.0% |
| ! | TGTTTCTGACCTCTGCGAGA+AGG | - | tig0019465:101843-101862 | Msa1374100:CDS | 50.0% |
| !! | ACCCTAATCTGAAGAGCGTC+AGG | - | tig0019465:102624-102643 | Msa1374100:intron | 50.0% |
| CCCTGACGCTCTTCAGATTA+GGG | + | tig0019465:102628-102647 | None:intergenic | 50.0% | |
| !! | CCCTAATCTGAAGAGCGTCA+GGG | - | tig0019465:102625-102644 | Msa1374100:intron | 50.0% |
| TCCCTGACGCTCTTCAGATT+AGG | + | tig0019465:102629-102648 | None:intergenic | 50.0% | |
| TGACAGGTTCTTGGGAAGCA+CGG | - | tig0019465:102863-102882 | Msa1374100:CDS | 50.0% | |
| ! | TGTTTCTGACCTCTGCGAGA+AGG | - | tig0019465:101843-101862 | Msa1374100:CDS | 50.0% |
| !! | ACCCTAATCTGAAGAGCGTC+AGG | - | tig0019465:102624-102643 | Msa1374100:intron | 50.0% |
| CCCTGACGCTCTTCAGATTA+GGG | + | tig0019465:102628-102647 | None:intergenic | 50.0% | |
| !! | CCCTAATCTGAAGAGCGTCA+GGG | - | tig0019465:102625-102644 | Msa1374100:intron | 50.0% |
| TCCCTGACGCTCTTCAGATT+AGG | + | tig0019465:102629-102648 | None:intergenic | 50.0% | |
| TGACAGGTTCTTGGGAAGCA+CGG | - | tig0019465:102863-102882 | Msa1374100:CDS | 50.0% | |
| AATGTGGGACCTTCTCGCAG+AGG | + | tig0019465:101855-101874 | None:intergenic | 55.0% | |
| CAGTCAGCGTACACGCAATC+TGG | + | tig0019465:102808-102827 | None:intergenic | 55.0% | |
| AATGTGGGACCTTCTCGCAG+AGG | + | tig0019465:101855-101874 | None:intergenic | 55.0% | |
| CAGTCAGCGTACACGCAATC+TGG | + | tig0019465:102808-102827 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019465 | gene | 101573 | 102908 | 101573 | ID=Msa1374100;Name=Msa1374100 |
| tig0019465 | mRNA | 101573 | 102908 | 101573 | ID=Msa1374100-mRNA-1;Parent=Msa1374100;Name=Msa1374100-mRNA-1;_AED=0.56;_eAED=0.69;_QI=0|0|0|1|0|0|3|0|70 |
| tig0019465 | exon | 102844 | 102908 | 102844 | ID=Msa1374100-mRNA-1:exon:3763;Parent=Msa1374100-mRNA-1 |
| tig0019465 | exon | 101779 | 101886 | 101779 | ID=Msa1374100-mRNA-1:exon:3762;Parent=Msa1374100-mRNA-1 |
| tig0019465 | exon | 101573 | 101612 | 101573 | ID=Msa1374100-mRNA-1:exon:3761;Parent=Msa1374100-mRNA-1 |
| tig0019465 | CDS | 102844 | 102908 | 102844 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
| tig0019465 | CDS | 101779 | 101886 | 101779 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
| tig0019465 | CDS | 101573 | 101612 | 101573 | ID=Msa1374100-mRNA-1:cds;Parent=Msa1374100-mRNA-1 |
| Gene Sequence |
| Protein sequence |