AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0350990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0350990 MtrunA17_Chr3g0085891 92.105 114 9 0 17 130 15 128 7.52e-74 222
Msa0350990 MtrunA17_Chr1g0160891 67.407 135 35 4 17 146 17 147 8.88e-53 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 69 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTAAATGTTGAAGATTC+TGG 0.196464 3_1:-16547627 Msa0350990:CDS
TCCTTCTCCTTCAAGAAATA+AGG 0.229085 3_1:+16550724 None:intergenic
CATATGAAATCACCATATTC+TGG 0.262324 3_1:+16549869 None:intergenic
TTGTAGACTTCGTAAGTAAA+TGG 0.270190 3_1:-16552032 Msa0350990:intron
CGGGGACGGGGACGGGGAAG+AGG 0.279136 3_1:-16551989 Msa0350990:CDS
GAAAGAGAGTAAACATAAAA+AGG 0.285268 3_1:-16548630 Msa0350990:CDS
TAGCATGGACTATTGATTCT+AGG 0.300006 3_1:-16547452 Msa0350990:three_prime_UTR
TTGAAACCGTCGCCGTTTAC+AGG 0.301274 3_1:-16552156 Msa0350990:intron
CGTCAATGGAACCCAGAATA+TGG 0.322177 3_1:-16549881 Msa0350990:intron
TGTGTTAAGGAGTTGGTTCC+AGG 0.329012 3_1:-16550060 Msa0350990:intron
TCATAGCGTAGCGAAGTTCT+TGG 0.332519 3_1:-16552183 None:intergenic
AGGAGGATGGGGACGGGGAC+GGG 0.334708 3_1:-16552002 Msa0350990:CDS
ATGGGGACGGGGACGGGGAC+GGG 0.342594 3_1:-16551996 Msa0350990:CDS
GGAGGATGGGGACGGGGACG+GGG 0.342875 3_1:-16552001 Msa0350990:CDS
TGGGGACGGGGACGGGGACG+GGG 0.356426 3_1:-16551995 Msa0350990:CDS
GTCATCAACTACAATTCTTC+TGG 0.366455 3_1:+16547355 None:intergenic
GTAGGCATACGTGCTCTTCC+AGG 0.366856 3_1:+16549612 None:intergenic
CTATGAGACAGTTGCTTGAA+TGG 0.378644 3_1:-16550780 Msa0350990:CDS
ATTTAAATGTTGAAGATTCT+GGG 0.382185 3_1:-16547626 Msa0350990:CDS
GGCAGAGGAGGATGGGGACG+GGG 0.384213 3_1:-16552007 Msa0350990:CDS
ATCCACCTCTTCTGTCTTCA+CGG 0.399427 3_1:-16549331 Msa0350990:CDS
TGGCAGAGGAGGATGGGGAC+GGG 0.402946 3_1:-16552008 Msa0350990:CDS
AATGAAGAGAGTAGCGAGTC+TGG 0.412583 3_1:-16548572 Msa0350990:CDS
GAGGAGGATGGGGACGGGGA+CGG 0.418582 3_1:-16552003 Msa0350990:CDS
TATGAGACAGTTGCTTGAAT+GGG 0.420424 3_1:-16550779 Msa0350990:CDS
CGACGAATGTGTTAAGGAGT+TGG 0.450423 3_1:-16550067 Msa0350990:CDS
GTTGTCGAAGTGTTAAACTA+AGG 0.451201 3_1:+16549364 None:intergenic
TACTCGTGATTCTCTGCCAC+AGG 0.453424 3_1:-16550100 Msa0350990:CDS
GAAGGAGAAGGAAGAATTGA+AGG 0.454002 3_1:-16550713 Msa0350990:CDS
TGAAGAAAGTGAAGATGAAG+AGG 0.461729 3_1:-16548597 Msa0350990:CDS
AATGGCTGGCAGAGGAGGAT+GGG 0.467693 3_1:-16552014 Msa0350990:CDS
AGTGGCTCCTTATTTCTTGA+AGG 0.473271 3_1:-16550731 Msa0350990:CDS
CTGGCAGAGGAGGATGGGGA+CGG 0.475505 3_1:-16552009 Msa0350990:CDS
CTTAATTGTCAGGGCGCAAA+AGG 0.477030 3_1:-16550164 Msa0350990:intron
TTCACGGTGGCCATTAGCAT+TGG 0.478779 3_1:-16549315 Msa0350990:CDS
ATATGAAATCACCATATTCT+GGG 0.482590 3_1:+16549870 None:intergenic
AAATGGCTGGCAGAGGAGGA+TGG 0.482599 3_1:-16552015 Msa0350990:CDS
ATAGGTGGTGCCAATGCTAA+TGG 0.484801 3_1:+16549305 None:intergenic
GATGGGGACGGGGACGGGGA+CGG 0.486855 3_1:-16551997 Msa0350990:CDS
ATTGCTAGAGAAGGAGCTCC+TGG 0.499023 3_1:-16549630 Msa0350990:CDS
AATGTTGAAGATTCTGGGGA+TGG 0.506964 3_1:-16547621 Msa0350990:intron
AAACTAAGCAGATGCTGAGC+CGG 0.515920 3_1:-16549910 Msa0350990:CDS
GAAGAATTGTAGTTGATGAC+AGG 0.516196 3_1:-16547352 Msa0350990:three_prime_UTR
TGGAACTGATGATTATGATA+AGG 0.518462 3_1:-16548552 Msa0350990:intron
ATGGCTGGCAGAGGAGGATG+GGG 0.521277 3_1:-16552013 Msa0350990:CDS
TCCTTATTTCTTGAAGGAGA+AGG 0.526141 3_1:-16550725 Msa0350990:CDS
GTCCGAGAGATACCTGTAAA+CGG 0.535958 3_1:+16552144 None:intergenic
AAGTAAATGGCTGGCAGAGG+AGG 0.552160 3_1:-16552019 Msa0350990:exon
CGTAAGTAAATGGCTGGCAG+AGG 0.553107 3_1:-16552022 Msa0350990:exon
AGACTTCGTAAGTAAATGGC+TGG 0.562391 3_1:-16552028 Msa0350990:exon
TCATGTATTTCAGATGAACC+TGG 0.565521 3_1:-16547516 Msa0350990:intron
TGGCTGCTTCTATACTAGCA+TGG 0.576173 3_1:-16547467 Msa0350990:three_prime_UTR
AAAACTTGCATTGCTAGAGA+AGG 0.581983 3_1:-16549639 Msa0350990:CDS
AAGGAGAAGGAAGAATTGAA+GGG 0.585858 3_1:-16550712 Msa0350990:intron
GTGATTCTTTACTCATCCTG+TGG 0.597923 3_1:-16547487 Msa0350990:three_prime_UTR
AAACTACAAATGGAAGTGGT+CGG 0.599249 3_1:+16551957 None:intergenic
ATGAGACAGTTGCTTGAATG+GGG 0.600528 3_1:-16550778 Msa0350990:CDS
GTAAAGAATCACTACAGTCC+AGG 0.600529 3_1:+16547498 None:intergenic
GATTTACCTGATGTTAAACA+CGG 0.617922 3_1:-16550817 Msa0350990:CDS
GCTAGTATAGAAGCAGCCAC+AGG 0.632363 3_1:+16547471 None:intergenic
TTTAAATGTTGAAGATTCTG+GGG 0.632918 3_1:-16547625 Msa0350990:CDS
TCAAGCAGCAAGTTTAACAA+AGG 0.635144 3_1:+16547378 None:intergenic
CACCGTGAAGACAGAAGAGG+TGG 0.639837 3_1:+16549329 None:intergenic
GAAGAGGTGGATGACAACAT+AGG 0.646634 3_1:+16549342 None:intergenic
GAGATACCTGTAAACGGCGA+CGG 0.655045 3_1:+16552150 None:intergenic
AAATGTGTTGACAGCATAGG+TGG 0.658323 3_1:+16549290 None:intergenic
TCGTCGAAAACTAAAACCTG+TGG 0.697134 3_1:+16550084 None:intergenic
GGCCACCGTGAAGACAGAAG+AGG 0.698678 3_1:+16549326 None:intergenic
CACCTCTTCTGTCTTCACGG+TGG 0.731098 3_1:-16549328 Msa0350990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTCAAAATATTTC+TGG - chr3_1:16547699-16547718 Msa0350990:intron 10.0%
!!! TTCATTTTAATAAATAATGA+AGG - chr3_1:16547918-16547937 Msa0350990:intron 10.0%
!! AAATGAAAACTAAAAAAACA+AGG + chr3_1:16547788-16547807 None:intergenic 15.0%
!!! TTTTGATAGATATTTTAAAG+TGG - chr3_1:16548758-16548777 Msa0350990:intron 15.0%
!! CTTTAAACAATAATATATCA+TGG + chr3_1:16549162-16549181 None:intergenic 15.0%
!!! CAAATAATTTAGAACTAAAT+TGG - chr3_1:16549562-16549581 Msa0350990:intron 15.0%
!! TTGTTAACGTTAAAAAATAA+GGG + chr3_1:16549929-16549948 None:intergenic 15.0%
!! TTTGTTAACGTTAAAAAATA+AGG + chr3_1:16549930-16549949 None:intergenic 15.0%
!!! TTTTTTAACGTTAACAAAAT+AGG - chr3_1:16549932-16549951 Msa0350990:intron 15.0%
!!! TTTTTAACGTTAACAAAATA+GGG - chr3_1:16549933-16549952 Msa0350990:intron 15.0%
!! AAAAGAAATCATATTAAACT+TGG - chr3_1:16551546-16551565 Msa0350990:intron 15.0%
!! GAAAATGAAAAAAAAAATCT+TGG + chr3_1:16551801-16551820 None:intergenic 15.0%
!!! TTTTTCATTTTCGTATTAAA+AGG - chr3_1:16551809-16551828 Msa0350990:intron 15.0%
!! AACAATAAATTTACAGTCAA+AGG + chr3_1:16547391-16547410 None:intergenic 20.0%
!!! AGTTAAGTTGATTATTGAAA+CGG + chr3_1:16547600-16547619 None:intergenic 20.0%
!! TTGATTTATTTATGCTTATC+TGG + chr3_1:16548421-16548440 None:intergenic 20.0%
!! ACAGAAAATGAATTATAGTA+CGG + chr3_1:16548470-16548489 None:intergenic 20.0%
!! GAAATATAGAAATAGTTATG+AGG + chr3_1:16548535-16548554 None:intergenic 20.0%
!! ACAGAAAATAGATAATTACA+CGG + chr3_1:16548631-16548650 None:intergenic 20.0%
!! TCACAATATATATCATGTAA+AGG + chr3_1:16548835-16548854 None:intergenic 20.0%
!!! ATTGTTTAAAGTATCTAACA+TGG - chr3_1:16549171-16549190 Msa0350990:intron 20.0%
!!! GAATATTTTCAATGCTTATA+TGG - chr3_1:16549276-16549295 Msa0350990:intron 20.0%
!!! AATAATGGAATAGGATTTAT+GGG - chr3_1:16549474-16549493 Msa0350990:intron 20.0%
!!! CACATTTTTAATGTTATAAC+AGG - chr3_1:16550233-16550252 Msa0350990:intron 20.0%
!!! ATTTTTAATGTTATAACAGG+AGG - chr3_1:16550236-16550255 Msa0350990:intron 20.0%
!! TGTTCGAATTATAGAATAAA+GGG - chr3_1:16550501-16550520 Msa0350990:intron 20.0%
!!! TTCAATTTGAAAATTTTGTG+AGG + chr3_1:16551062-16551081 None:intergenic 20.0%
!!! GTTTTTTTAACATTTAGAGA+CGG + chr3_1:16551183-16551202 None:intergenic 20.0%
!! AAATGTTAAAAAAACCTCTA+CGG - chr3_1:16551188-16551207 Msa0350990:intron 20.0%
!! TATACAGTTTGTAATGATAT+TGG + chr3_1:16551432-16551451 None:intergenic 20.0%
!! ATGTAAGTTGTTTGTAAATT+TGG - chr3_1:16551637-16551656 Msa0350990:intron 20.0%
!!! TTTGGATTTTAGAAATGTAT+AGG - chr3_1:16551655-16551674 Msa0350990:intron 20.0%
!!! TTGGATTTTAGAAATGTATA+GGG - chr3_1:16551656-16551675 Msa0350990:intron 20.0%
!!! CTGCAAAATTTTAATTTAGT+TGG + chr3_1:16551839-16551858 None:intergenic 20.0%
!! ATTTAAATGTTGAAGATTCT+GGG - chr3_1:16551881-16551900 Msa0350990:intron 20.0%
!!! AAATATTTCTGGTATCTATG+TGG - chr3_1:16547710-16547729 Msa0350990:intron 25.0%
!! AAAACAAGGTCTTATAATCT+AGG + chr3_1:16547774-16547793 None:intergenic 25.0%
! GTTTCTTTCATAAACTATCA+TGG - chr3_1:16548201-16548220 Msa0350990:intron 25.0%
! TTATAGACATGCAATAAGAT+GGG - chr3_1:16548251-16548270 Msa0350990:intron 25.0%
! AAAATGAATTATAGTACGGA+TGG + chr3_1:16548466-16548485 None:intergenic 25.0%
! ACATGATATATATTGTGAGA+TGG - chr3_1:16548837-16548856 Msa0350990:intron 25.0%
!! GTCCTCTAAAAATTTGAATA+TGG - chr3_1:16548911-16548930 Msa0350990:intron 25.0%
!!! AGCCATATTCAAATTTTTAG+AGG + chr3_1:16548916-16548935 None:intergenic 25.0%
!!! GGTCAAATTTTAATCTTTGA+GGG + chr3_1:16548979-16548998 None:intergenic 25.0%
!!! TGGTCAAATTTTAATCTTTG+AGG + chr3_1:16548980-16548999 None:intergenic 25.0%
!! ATGTCTTTGGAAGATTATTA+CGG - chr3_1:16549096-16549115 Msa0350990:intron 25.0%
!! GAATAATGGAATAGGATTTA+TGG - chr3_1:16549473-16549492 Msa0350990:intron 25.0%
!! TACTTTTCTTTATGCATTTG+AGG - chr3_1:16549529-16549548 Msa0350990:intron 25.0%
!! AGAACTAAATTGGTAATTTC+AGG - chr3_1:16549572-16549591 Msa0350990:intron 25.0%
! ATATGAAATCACCATATTCT+GGG + chr3_1:16549640-16549659 None:intergenic 25.0%
! TTGATCATTCTATGTACATA+TGG - chr3_1:16549775-16549794 Msa0350990:intron 25.0%
! ATATTATCCATGTTATGAGT+TGG - chr3_1:16549805-16549824 Msa0350990:intron 25.0%
! TTAAGGAATCAAAAAATGAC+TGG + chr3_1:16549968-16549987 None:intergenic 25.0%
! TAATATTGTGTTACGAGATA+TGG - chr3_1:16550011-16550030 Msa0350990:intron 25.0%
! AATTGACAAAACTATCCATT+AGG - chr3_1:16550359-16550378 Msa0350990:intron 25.0%
! GTGTTCGAATTATAGAATAA+AGG - chr3_1:16550500-16550519 Msa0350990:intron 25.0%
! TTGCTAGTTAGATTTCTATT+TGG - chr3_1:16550608-16550627 Msa0350990:intron 25.0%
! TGCTAGTTAGATTTCTATTT+GGG - chr3_1:16550609-16550628 Msa0350990:intron 25.0%
!! TCTGTTGTATTTTCTGTTAT+TGG - chr3_1:16550640-16550659 Msa0350990:intron 25.0%
! GCATATATCATAGTTGTAAT+TGG - chr3_1:16550754-16550773 Msa0350990:CDS 25.0%
! GAAAGAGAGTAAACATAAAA+AGG - chr3_1:16550877-16550896 Msa0350990:intron 25.0%
! AAAATTAACACTCAAAGTAG+AGG + chr3_1:16550992-16551011 None:intergenic 25.0%
!!! CTGTTTTGAGATAAAATTAG+TGG - chr3_1:16551138-16551157 Msa0350990:intron 25.0%
! ATAGTAAGCTTCATCAATTA+TGG - chr3_1:16551243-16551262 Msa0350990:intron 25.0%
! GAATGGTAAACATAACATTT+GGG + chr3_1:16551320-16551339 None:intergenic 25.0%
! AGAATGGTAAACATAACATT+TGG + chr3_1:16551321-16551340 None:intergenic 25.0%
! AGTATGTGTAATATTTGTAG+GGG + chr3_1:16551509-16551528 None:intergenic 25.0%
! CAGTATGTGTAATATTTGTA+GGG + chr3_1:16551510-16551529 None:intergenic 25.0%
! ACAGTATGTGTAATATTTGT+AGG + chr3_1:16551511-16551530 None:intergenic 25.0%
! GATTTAAATGTTGAAGATTC+TGG - chr3_1:16551880-16551899 Msa0350990:intron 25.0%
! TTTAAATGTTGAAGATTCTG+GGG - chr3_1:16551882-16551901 Msa0350990:intron 25.0%
TTGTAGACTTCGTAAGTAAA+TGG - chr3_1:16547475-16547494 Msa0350990:three_prime_UTR 30.0%
! GATTTTAAATTCTGCTAACG+AGG - chr3_1:16547823-16547842 Msa0350990:intron 30.0%
GAATATTTGTGATAGAGAGA+AGG - chr3_1:16547866-16547885 Msa0350990:intron 30.0%
AAGAAGTTAATCCAAGCAAA+CGG - chr3_1:16548085-16548104 Msa0350990:intron 30.0%
GGGTAAACAACTTAATTAAG+TGG - chr3_1:16548120-16548139 Msa0350990:intron 30.0%
CTTATAGACATGCAATAAGA+TGG - chr3_1:16548250-16548269 Msa0350990:intron 30.0%
TATAGACATGCAATAAGATG+GGG - chr3_1:16548252-16548271 Msa0350990:intron 30.0%
!!! CTTCTTTGTTTTTTTGTCCT+AGG + chr3_1:16548344-16548363 None:intergenic 30.0%
!! ATAACACTTTGAGACTGTTT+GGG + chr3_1:16548394-16548413 None:intergenic 30.0%
GATTTACCTGATGTTAAACA+CGG - chr3_1:16548690-16548709 Msa0350990:intron 30.0%
! ATTTTTCCGTGTTTAACATC+AGG + chr3_1:16548699-16548718 None:intergenic 30.0%
TGATGTTAAACACGGAAAAA+TGG - chr3_1:16548698-16548717 Msa0350990:intron 30.0%
TGATAAAGAAAACCGCAATT+TGG - chr3_1:16548889-16548908 Msa0350990:intron 30.0%
!! ATTTTTAGAGGACCAAATTG+CGG + chr3_1:16548904-16548923 None:intergenic 30.0%
! TTGGTGATAAATTCTCAACA+TGG + chr3_1:16549000-16549019 None:intergenic 30.0%
TCACCAAATTAGAATTAGAG+TGG - chr3_1:16549013-16549032 Msa0350990:intron 30.0%
TCACCACTCTAATTCTAATT+TGG + chr3_1:16549019-16549038 None:intergenic 30.0%
! GTGATACTTTTGTATCTTGA+AGG - chr3_1:16549060-16549079 Msa0350990:intron 30.0%
ATGTGGCTTTCAAATGATTA+GGG + chr3_1:16549127-16549146 None:intergenic 30.0%
AATGTGGCTTTCAAATGATT+AGG + chr3_1:16549128-16549147 None:intergenic 30.0%
ATCATTTGAAAGCCACATTT+AGG - chr3_1:16549129-16549148 Msa0350990:intron 30.0%
CATGGAATAAATCCTAAATG+TGG + chr3_1:16549144-16549163 None:intergenic 30.0%
ATAAGGAATGAAATACTTCC+TGG - chr3_1:16549207-16549226 Msa0350990:intron 30.0%
CAGATATTTAGGGACAAATA+TGG + chr3_1:16549304-16549323 None:intergenic 30.0%
CATATTTGTCCCTAAATATC+TGG - chr3_1:16549302-16549321 Msa0350990:CDS 30.0%
TGACAATTAAGCAAGAAAAG+CGG + chr3_1:16549334-16549353 None:intergenic 30.0%
! CTTTTCTTGCTTAATTGTCA+GGG - chr3_1:16549334-16549353 Msa0350990:CDS 30.0%
!!! GGAAATGGTTATGTTTTTTG+TGG - chr3_1:16549495-16549514 Msa0350990:intron 30.0%
CATATGAAATCACCATATTC+TGG + chr3_1:16549641-16549660 None:intergenic 30.0%
GTTATTCAAATTGATAGAGC+AGG - chr3_1:16549713-16549732 Msa0350990:intron 30.0%
ATGATCAATACTCAGTAGAA+TGG + chr3_1:16549763-16549782 None:intergenic 30.0%
ATTCTATGTACATATGGTCA+TGG - chr3_1:16549781-16549800 Msa0350990:intron 30.0%
TTCTATGTACATATGGTCAT+GGG - chr3_1:16549782-16549801 Msa0350990:intron 30.0%
TCTACTAATAGATGTTTGTG+TGG - chr3_1:16549835-16549854 Msa0350990:intron 30.0%
AAAATAAGGGAAAGAATCGT+AGG + chr3_1:16549916-16549935 None:intergenic 30.0%
AACTCACACTTAATCAGTTA+AGG + chr3_1:16549985-16550004 None:intergenic 30.0%
! TAAAAATGTGTTGACAGCAT+AGG + chr3_1:16550223-16550242 None:intergenic 30.0%
CAGTAATAAGTGATAACAGT+GGG + chr3_1:16550287-16550306 None:intergenic 30.0%
TCAGTAATAAGTGATAACAG+TGG + chr3_1:16550288-16550307 None:intergenic 30.0%
! TTTGTTACCTACATTTTGTC+AGG - chr3_1:16550437-16550456 Msa0350990:intron 30.0%
!! TTTCTTTGAAATCCAACTCT+TGG - chr3_1:16550844-16550863 Msa0350990:intron 30.0%
!! TTCTTTGAAATCCAACTCTT+GGG - chr3_1:16550845-16550864 Msa0350990:intron 30.0%
ATGTTTACTCTCTTTCTGTT+AGG + chr3_1:16550873-16550892 None:intergenic 30.0%
AGAGAGTAAACATAAAAAGG+AGG - chr3_1:16550880-16550899 Msa0350990:intron 30.0%
TGGAACTGATGATTATGATA+AGG - chr3_1:16550955-16550974 Msa0350990:intron 30.0%
! TCTTTTCACAAGTTCAAGAA+TGG + chr3_1:16551016-16551035 None:intergenic 30.0%
ATAGTACCATGAAAAGTAGA+TGG - chr3_1:16551282-16551301 Msa0350990:intron 30.0%
TAGTACCATGAAAAGTAGAT+GGG - chr3_1:16551283-16551302 Msa0350990:intron 30.0%
ATGTTATGTTTACCATTCTG+AGG - chr3_1:16551322-16551341 Msa0350990:intron 30.0%
! AGAGGAATTGTCTTTTATGA+TGG + chr3_1:16551393-16551412 None:intergenic 30.0%
AAAAGACAATTCCTCTACAT+AGG - chr3_1:16551397-16551416 Msa0350990:intron 30.0%
AGTTGAGTATATACGAAACT+TGG - chr3_1:16551476-16551495 Msa0350990:intron 30.0%
! ATGATTTCTTTTCCTTCACA+CGG + chr3_1:16551538-16551557 None:intergenic 30.0%
CTTACATTGAATGCTGAAAT+AGG + chr3_1:16551624-16551643 None:intergenic 30.0%
AAACTACAAATGGAAGTGGT+CGG + chr3_1:16547553-16547572 None:intergenic 35.0%
GGAAAAACTACAAATGGAAG+TGG + chr3_1:16547557-16547576 None:intergenic 35.0%
! TCCATTTGTAGTTTTTCCAC+AGG - chr3_1:16547559-16547578 Msa0350990:intron 35.0%
ACCTGTGGAAAAACTACAAA+TGG + chr3_1:16547563-16547582 None:intergenic 35.0%
CTTAACTATAAACTCCGAAG+CGG - chr3_1:16547613-16547632 Msa0350990:intron 35.0%
TATTTGTGATAGAGAGAAGG+TGG - chr3_1:16547869-16547888 Msa0350990:intron 35.0%
TCTATCACATAGAGCTCTTA+TGG - chr3_1:16547978-16547997 Msa0350990:intron 35.0%
AGTGTGATAAGTGTTTGTAC+AGG - chr3_1:16548050-16548069 Msa0350990:intron 35.0%
! ATTAAGTTGTTTACCCAGAC+AGG + chr3_1:16548116-16548135 None:intergenic 35.0%
!! CATAACACTTTGAGACTGTT+TGG + chr3_1:16548395-16548414 None:intergenic 35.0%
TGAATTATAGTACGGATGGA+TGG + chr3_1:16548462-16548481 None:intergenic 35.0%
CTTTATCAATCTGATGCTAC+AGG - chr3_1:16548662-16548681 Msa0350990:intron 35.0%
TATGAGACAGTTGCTTGAAT+GGG - chr3_1:16548728-16548747 Msa0350990:intron 35.0%
! TCCTTATTTCTTGAAGGAGA+AGG - chr3_1:16548782-16548801 Msa0350990:intron 35.0%
TCCTTCTCCTTCAAGAAATA+AGG + chr3_1:16548786-16548805 None:intergenic 35.0%
AAGGAGAAGGAAGAATTGAA+GGG - chr3_1:16548795-16548814 Msa0350990:intron 35.0%
! GTGTGATGACAAGTTTTTGT+GGG + chr3_1:16548952-16548971 None:intergenic 35.0%
! AGTGTGATGACAAGTTTTTG+TGG + chr3_1:16548953-16548972 None:intergenic 35.0%
GACAATTAAGCAAGAAAAGC+GGG + chr3_1:16549333-16549352 None:intergenic 35.0%
! GCTTTTCTTGCTTAATTGTC+AGG - chr3_1:16549333-16549352 Msa0350990:CDS 35.0%
CAGAGAATCACGAGTAAAAA+TGG + chr3_1:16549403-16549422 None:intergenic 35.0%
! AGTTTTCGACGAATGTGTTA+AGG - chr3_1:16549434-16549453 Msa0350990:intron 35.0%
TTGGTTCCAGGTATGAATAA+TGG - chr3_1:16549459-16549478 Msa0350990:intron 35.0%
CCTATTCCATTATTCATACC+TGG + chr3_1:16549468-16549487 None:intergenic 35.0%
! CCAGGTATGAATAATGGAAT+AGG - chr3_1:16549465-16549484 Msa0350990:intron 35.0%
GGAATAGGATTTATGGGAAA+TGG - chr3_1:16549480-16549499 Msa0350990:intron 35.0%
! CTTTATGCATTTGAGGTTTC+TGG - chr3_1:16549536-16549555 Msa0350990:intron 35.0%
! TGATAGAGCAGGATCTATTT+TGG - chr3_1:16549724-16549743 Msa0350990:intron 35.0%
TCAATACTCAGTAGAATGGA+AGG + chr3_1:16549759-16549778 None:intergenic 35.0%
AAAACTTGCATTGCTAGAGA+AGG - chr3_1:16549868-16549887 Msa0350990:intron 35.0%
TGTGTTACGAGATATGGATA+TGG - chr3_1:16550017-16550036 Msa0350990:intron 35.0%
!! GAATTCTTTGAAATCCTGTG+CGG - chr3_1:16550055-16550074 Msa0350990:intron 35.0%
!! AATTCTTTGAAATCCTGTGC+GGG - chr3_1:16550056-16550075 Msa0350990:intron 35.0%
TAATCTGACCAACACATGTA+TGG - chr3_1:16550100-16550119 Msa0350990:CDS 35.0%
GTAATACACCATACATGTGT+TGG + chr3_1:16550111-16550130 None:intergenic 35.0%
! GTTGTCGAAGTGTTAAACTA+AGG + chr3_1:16550146-16550165 None:intergenic 35.0%
AAGACAGTAATAAACGGAAC+AGG + chr3_1:16550264-16550283 None:intergenic 35.0%
AGTGGGAAGACAGTAATAAA+CGG + chr3_1:16550270-16550289 None:intergenic 35.0%
! CGAAATGGTAATGATCCTAA+TGG + chr3_1:16550377-16550396 None:intergenic 35.0%
! GTTTACTGTTCTAGACGAAA+TGG + chr3_1:16550392-16550411 None:intergenic 35.0%
! GTCTAGAACAGTAAACTTCA+CGG - chr3_1:16550396-16550415 Msa0350990:intron 35.0%
GATTTCACCTGACAAAATGT+AGG + chr3_1:16550447-16550466 None:intergenic 35.0%
ATTCGAACACTTTCCTCTAA+AGG + chr3_1:16550490-16550509 None:intergenic 35.0%
! CTGTTATTGGCTAGTTGTTA+TGG - chr3_1:16550653-16550672 Msa0350990:intron 35.0%
!! TACAAAGAGAAAGGGGTATT+GGG + chr3_1:16550686-16550705 None:intergenic 35.0%
! TTACAAAGAGAAAGGGGTAT+TGG + chr3_1:16550687-16550706 None:intergenic 35.0%
CTTCTGTTACAAAGAGAAAG+GGG + chr3_1:16550693-16550712 None:intergenic 35.0%
CCTTCTGTTACAAAGAGAAA+GGG + chr3_1:16550694-16550713 None:intergenic 35.0%
ACCTTCTGTTACAAAGAGAA+AGG + chr3_1:16550695-16550714 None:intergenic 35.0%
! TGCCAAAGATCCTTTTCTAA+GGG + chr3_1:16550737-16550756 None:intergenic 35.0%
! ATGCCAAAGATCCTTTTCTA+AGG + chr3_1:16550738-16550757 None:intergenic 35.0%
!!! ATTGGTTTTATAACCAGCGT+AGG - chr3_1:16550772-16550791 Msa0350990:CDS 35.0%
TGAAGAAAGTGAAGATGAAG+AGG - chr3_1:16550910-16550929 Msa0350990:intron 35.0%
ACTCAAAGTAGAGGATAAAG+TGG + chr3_1:16550983-16551002 None:intergenic 35.0%
TGAAGAAGCAAAACCACATT+TGG - chr3_1:16551114-16551133 Msa0350990:intron 35.0%
ATCTCAAAACAGACCAAATG+TGG + chr3_1:16551130-16551149 None:intergenic 35.0%
AGTACCATGAAAAGTAGATG+GGG - chr3_1:16551284-16551303 Msa0350990:intron 35.0%
! CATAACATTTGGGAAGTGTA+AGG + chr3_1:16551310-16551329 None:intergenic 35.0%
! TGATTTCTTTTCCTTCACAC+GGG + chr3_1:16551537-16551556 None:intergenic 35.0%
TGTTAATACTTATGCACCAC+AGG - chr3_1:16551573-16551592 Msa0350990:intron 35.0%
!!! AGGTTTTTTACATGAGTCGA+AGG + chr3_1:16551604-16551623 None:intergenic 35.0%
AATGTATAGGGAGTAATGTG+CGG - chr3_1:16551668-16551687 Msa0350990:intron 35.0%
CACACTCACAACAAAAAAGA+GGG + chr3_1:16551741-16551760 None:intergenic 35.0%
CTATCAACTTCGTAATTCTC+TGG - chr3_1:16551951-16551970 Msa0350990:CDS 35.0%
TCATGTATTTCAGATGAACC+TGG - chr3_1:16551991-16552010 Msa0350990:CDS 35.0%
!! TAGCATGGACTATTGATTCT+AGG - chr3_1:16552055-16552074 Msa0350990:intron 35.0%
TCAAGCAGCAAGTTTAACAA+AGG + chr3_1:16552132-16552151 None:intergenic 35.0%
GTCATCAACTACAATTCTTC+TGG + chr3_1:16552155-16552174 None:intergenic 35.0%
!! GAAGAATTGTAGTTGATGAC+AGG - chr3_1:16552155-16552174 Msa0350990:intron 35.0%
TCTGTTATCATCACACTTGC+AGG + chr3_1:16547445-16547464 None:intergenic 40.0%
AGACTTCGTAAGTAAATGGC+TGG - chr3_1:16547479-16547498 Msa0350990:three_prime_UTR 40.0%
! ATGCAATAAGATGGGGTGTT+GGG - chr3_1:16548259-16548278 Msa0350990:intron 40.0%
GATAAGGGATAAGGAGTTAG+AGG - chr3_1:16548299-16548318 Msa0350990:intron 40.0%
! GGATGGATAGAAGGTTTGTT+TGG + chr3_1:16548445-16548464 None:intergenic 40.0%
CAACCATGTCTCTGGTTAAA+TGG - chr3_1:16548496-16548515 Msa0350990:intron 40.0%
TGACCATTTAACCAGAGACA+TGG + chr3_1:16548502-16548521 None:intergenic 40.0%
TTCATAACCTTGCAAGCAAG+AGG - chr3_1:16548552-16548571 Msa0350990:intron 40.0%
TCATAACCTTGCAAGCAAGA+GGG - chr3_1:16548553-16548572 Msa0350990:CDS 40.0%
CTATGAGACAGTTGCTTGAA+TGG - chr3_1:16548727-16548746 Msa0350990:intron 40.0%
ATGAGACAGTTGCTTGAATG+GGG - chr3_1:16548729-16548748 Msa0350990:intron 40.0%
! AGTGGCTCCTTATTTCTTGA+AGG - chr3_1:16548776-16548795 Msa0350990:intron 40.0%
GAAGGAGAAGGAAGAATTGA+AGG - chr3_1:16548794-16548813 Msa0350990:intron 40.0%
GAAGGAAGAATTGAAGGGTA+TGG - chr3_1:16548800-16548819 Msa0350990:intron 40.0%
TAGAGTGGTGACAATGACTT+TGG - chr3_1:16549028-16549047 Msa0350990:intron 40.0%
!! GTATCTTGAAGGCATCGATT+TGG - chr3_1:16549071-16549090 Msa0350990:intron 40.0%
!! CATCGATTTGGTGATGTCTT+TGG - chr3_1:16549083-16549102 Msa0350990:intron 40.0%
ATGGCTTGACGATACTCATA+AGG - chr3_1:16549190-16549209 Msa0350990:intron 40.0%
TGTACATCTGCTCATATTCC+AGG + chr3_1:16549228-16549247 None:intergenic 40.0%
AATTAAGCAAGAAAAGCGGG+AGG + chr3_1:16549330-16549349 None:intergenic 40.0%
TCGTCGAAAACTAAAACCTG+TGG + chr3_1:16549426-16549445 None:intergenic 40.0%
!!! GGTTCCATTGACGTTTTTTC+CGG + chr3_1:16549619-16549638 None:intergenic 40.0%
CAGAGATCCAACTCATAACA+TGG + chr3_1:16549815-16549834 None:intergenic 40.0%
CTAATAGATGTTTGTGTGGC+AGG - chr3_1:16549839-16549858 Msa0350990:intron 40.0%
! AAATGTGTTGACAGCATAGG+TGG + chr3_1:16550220-16550239 None:intergenic 40.0%
GGTAGAAGAATCGTCAACAT+AGG + chr3_1:16550469-16550488 None:intergenic 40.0%
GACGATTCTTCTACCTTTAG+AGG - chr3_1:16550474-16550493 Msa0350990:intron 40.0%
CCCTTTCTCTTTGTAACAGA+AGG - chr3_1:16550691-16550710 Msa0350990:intron 40.0%
TAACCTTCCTCCCTTAGAAA+AGG - chr3_1:16550724-16550743 Msa0350990:CDS 40.0%
!! CAAAGATCCTTTTCTAAGGG+AGG + chr3_1:16550734-16550753 None:intergenic 40.0%
CTCCCTTAGAAAAGGATCTT+TGG - chr3_1:16550732-16550751 Msa0350990:CDS 40.0%
TGAAGCTACAAACCTCAGAA+TGG + chr3_1:16551337-16551356 None:intergenic 40.0%
CCACACTCACAACAAAAAAG+AGG + chr3_1:16551742-16551761 None:intergenic 40.0%
!!! CCTCTTTTTTGTTGTGAGTG+TGG - chr3_1:16551739-16551758 Msa0350990:intron 40.0%
!!! CTTTTTTGTTGTGAGTGTGG+TGG - chr3_1:16551742-16551761 Msa0350990:intron 40.0%
GGCAACTGTATGCTACATAT+TGG + chr3_1:16551780-16551799 None:intergenic 40.0%
! AATGTTGAAGATTCTGGGGA+TGG - chr3_1:16551886-16551905 Msa0350990:intron 40.0%
GTAAAGAATCACTACAGTCC+AGG + chr3_1:16552012-16552031 None:intergenic 40.0%
GTGATTCTTTACTCATCCTG+TGG - chr3_1:16552020-16552039 Msa0350990:exon 40.0%
GTCCGAGAGATACCTGTAAA+CGG + chr3_1:16547366-16547385 None:intergenic 45.0%
TCATCACACTTGCAGGTTCT+AGG + chr3_1:16547438-16547457 None:intergenic 45.0%
GAGTGTAGAGATGTTACCTG+TGG + chr3_1:16547578-16547597 None:intergenic 45.0%
TCAATCAGTAGTGTCCGCTT+CGG + chr3_1:16547630-16547649 None:intergenic 45.0%
! AAGCGGACACTACTGATTGA+AGG - chr3_1:16547630-16547649 Msa0350990:CDS 45.0%
TTGAACGTATACGCATGTGC+TGG + chr3_1:16547674-16547693 None:intergenic 45.0%
CTATGTGGCAGTGTTATGTC+TGG - chr3_1:16547725-16547744 Msa0350990:intron 45.0%
! AGGAAGCACGAACATAGACA+AGG + chr3_1:16547754-16547773 None:intergenic 45.0%
CATGCAATAAGATGGGGTGT+TGG - chr3_1:16548258-16548277 Msa0350990:intron 45.0%
TATCCCTTATCTCGTACCAG+CGG + chr3_1:16548290-16548309 None:intergenic 45.0%
CTGGTACGAGATAAGGGATA+AGG - chr3_1:16548290-16548309 Msa0350990:intron 45.0%
GATAAGGAGTTAGAGGTCCT+GGG - chr3_1:16548306-16548325 Msa0350990:intron 45.0%
! CTAGGTTTGAGTTTGAACCC+AGG + chr3_1:16548326-16548345 None:intergenic 45.0%
CTGGGTTCAAACTCAAACCT+AGG - chr3_1:16548324-16548343 Msa0350990:intron 45.0%
AGACTGTTTGGGAGAGCTTA+TGG + chr3_1:16548383-16548402 None:intergenic 45.0%
AGTACGGATGGATGGATAGA+AGG + chr3_1:16548454-16548473 None:intergenic 45.0%
CTTAATTGTCAGGGCGCAAA+AGG - chr3_1:16549343-16549362 Msa0350990:CDS 45.0%
CGACGAATGTGTTAAGGAGT+TGG - chr3_1:16549440-16549459 Msa0350990:intron 45.0%
! TGTGTTAAGGAGTTGGTTCC+AGG - chr3_1:16549447-16549466 Msa0350990:intron 45.0%
AAACTAAGCAGATGCTGAGC+CGG - chr3_1:16549597-16549616 Msa0350990:intron 45.0%
TGAGCCGGAAAAAACGTCAA+TGG - chr3_1:16549612-16549631 Msa0350990:intron 45.0%
CGTCAATGGAACCCAGAATA+TGG - chr3_1:16549626-16549645 Msa0350990:CDS 45.0%
GAAGAGGTGGATGACAACAT+AGG + chr3_1:16550168-16550187 None:intergenic 45.0%
ATCCACCTCTTCTGTCTTCA+CGG - chr3_1:16550176-16550195 Msa0350990:intron 45.0%
! ATAGGTGGTGCCAATGCTAA+TGG + chr3_1:16550205-16550224 None:intergenic 45.0%
TGTCAATTGTAGCGTTGTGC+TGG + chr3_1:16550347-16550366 None:intergenic 45.0%
!! AGAGAAAGGGGTATTGGGTA+AGG + chr3_1:16550681-16550700 None:intergenic 45.0%
!! GATCCTTTTCTAAGGGAGGA+AGG + chr3_1:16550730-16550749 None:intergenic 45.0%
TCTGTTAGGAACCCAAGAGT+TGG + chr3_1:16550859-16550878 None:intergenic 45.0%
AATGAAGAGAGTAGCGAGTC+TGG - chr3_1:16550935-16550954 Msa0350990:intron 45.0%
GGTCTATAGTCAATCCGTAG+AGG + chr3_1:16551205-16551224 None:intergenic 45.0%
!! AAGGCCCCATCTACTTTTCA+TGG + chr3_1:16551291-16551310 None:intergenic 45.0%
GGACTGAGTAACCTATGTAG+AGG + chr3_1:16551411-16551430 None:intergenic 45.0%
TGGCTGCTTCTATACTAGCA+TGG - chr3_1:16552040-16552059 Msa0350990:intron 45.0%
!!! TATATTTTTTTACAATATAT+TGG + chr3_1:16551226-16551245 None:intergenic 5.0%
TTGAAACCGTCGCCGTTTAC+AGG - chr3_1:16547351-16547370 Msa0350990:three_prime_UTR 50.0%
GAGATACCTGTAAACGGCGA+CGG + chr3_1:16547360-16547379 None:intergenic 50.0%
CGCCGTTTACAGGTATCTCT+CGG - chr3_1:16547361-16547380 Msa0350990:three_prime_UTR 50.0%
CGTAAGTAAATGGCTGGCAG+AGG - chr3_1:16547485-16547504 Msa0350990:three_prime_UTR 50.0%
AAGTAAATGGCTGGCAGAGG+AGG - chr3_1:16547488-16547507 Msa0350990:three_prime_UTR 50.0%
! CATGTGCTGGCGACATATGT+CGG + chr3_1:16547661-16547680 None:intergenic 50.0%
GACAGGACATACCGTTTGCT+TGG + chr3_1:16548099-16548118 None:intergenic 50.0%
AGCAAACGGTATGTCCTGTC+TGG - chr3_1:16548099-16548118 Msa0350990:intron 50.0%
GCAAACGGTATGTCCTGTCT+GGG - chr3_1:16548100-16548119 Msa0350990:intron 50.0%
GGATAAGGAGTTAGAGGTCC+TGG - chr3_1:16548305-16548324 Msa0350990:intron 50.0%
GTTCTCTGCAACCATGTCTC+TGG - chr3_1:16548488-16548507 Msa0350990:intron 50.0%
AGTCAACCCTCTTGCTTGCA+AGG + chr3_1:16548562-16548581 None:intergenic 50.0%
CGGGAGGAGCCAGATATTTA+GGG + chr3_1:16549314-16549333 None:intergenic 50.0%
TACTCGTGATTCTCTGCCAC+AGG - chr3_1:16549407-16549426 Msa0350990:intron 50.0%
ATTGCTAGAGAAGGAGCTCC+TGG - chr3_1:16549877-16549896 Msa0350990:intron 50.0%
TTGAAATCCTGTGCGGGACT+TGG - chr3_1:16550062-16550081 Msa0350990:CDS 50.0%
TGAAATCCTGTGCGGGACTT+GGG - chr3_1:16550063-16550082 Msa0350990:CDS 50.0%
TTCACGGTGGCCATTAGCAT+TGG - chr3_1:16550192-16550211 Msa0350990:intron 50.0%
CAATTGTAGCGTTGTGCTGG+TGG + chr3_1:16550344-16550363 None:intergenic 50.0%
CATACTGTTTGCCCGTGTGA+AGG - chr3_1:16551523-16551542 Msa0350990:intron 50.0%
TGAGTCGAAGGACAAACCTG+TGG + chr3_1:16551592-16551611 None:intergenic 50.0%
GCTAGTATAGAAGCAGCCAC+AGG + chr3_1:16552039-16552058 None:intergenic 50.0%
AAATGGCTGGCAGAGGAGGA+TGG - chr3_1:16547492-16547511 Msa0350990:exon 55.0%
AATGGCTGGCAGAGGAGGAT+GGG - chr3_1:16547493-16547512 Msa0350990:exon 55.0%
AGCTCCGCTGGTACGAGATA+AGG - chr3_1:16548283-16548302 Msa0350990:intron 55.0%
GCTCCGCTGGTACGAGATAA+GGG - chr3_1:16548284-16548303 Msa0350990:intron 55.0%
GCGGGAGGAGCCAGATATTT+AGG + chr3_1:16549315-16549334 None:intergenic 55.0%
GTAGGCATACGTGCTCTTCC+AGG + chr3_1:16549898-16549917 None:intergenic 55.0%
CACCGTGAAGACAGAAGAGG+TGG + chr3_1:16550181-16550200 None:intergenic 55.0%
CACCTCTTCTGTCTTCACGG+TGG - chr3_1:16550179-16550198 Msa0350990:intron 55.0%
AGCAACAGCTTCTCCTACGC+TGG + chr3_1:16550788-16550807 None:intergenic 55.0%
GGGAGTAATGTGCGGCATCA+AGG - chr3_1:16551676-16551695 Msa0350990:intron 55.0%
ATGGCTGGCAGAGGAGGATG+GGG - chr3_1:16547494-16547513 Msa0350990:exon 60.0%
TCCTGTGCGGGACTTGGGAT+TGG - chr3_1:16550068-16550087 Msa0350990:CDS 60.0%
TCCAATCCCAAGTCCCGCAC+AGG + chr3_1:16550072-16550091 None:intergenic 60.0%
GGCCACCGTGAAGACAGAAG+AGG + chr3_1:16550184-16550203 None:intergenic 60.0%
! TAGCGTTGTGCTGGTGGCAG+TGG + chr3_1:16550338-16550357 None:intergenic 60.0%
CTGGCAGAGGAGGATGGGGA+CGG - chr3_1:16547498-16547517 Msa0350990:exon 65.0%
TGGCAGAGGAGGATGGGGAC+GGG - chr3_1:16547499-16547518 Msa0350990:exon 65.0%
! TGTGCTGGTGGCAGTGGCAG+CGG + chr3_1:16550332-16550351 None:intergenic 65.0%
GGCAGAGGAGGATGGGGACG+GGG - chr3_1:16547500-16547519 Msa0350990:exon 70.0%
GAGGAGGATGGGGACGGGGA+CGG - chr3_1:16547504-16547523 Msa0350990:exon 70.0%
AGGAGGATGGGGACGGGGAC+GGG - chr3_1:16547505-16547524 Msa0350990:exon 70.0%
!! GGGGTGTTGGGTAGCTCCGC+TGG - chr3_1:16548271-16548290 Msa0350990:intron 70.0%
GGAGGATGGGGACGGGGACG+GGG - chr3_1:16547506-16547525 Msa0350990:exon 75.0%
GATGGGGACGGGGACGGGGA+CGG - chr3_1:16547510-16547529 Msa0350990:intron 75.0%
ATGGGGACGGGGACGGGGAC+GGG - chr3_1:16547511-16547530 Msa0350990:intron 75.0%
GCTGGTGGCAGTGGCAGCGG+TGG + chr3_1:16550329-16550348 None:intergenic 75.0%
! TGGGGACGGGGACGGGGACG+GGG - chr3_1:16547512-16547531 Msa0350990:intron 80.0%
! CGGGGACGGGGACGGGGAAG+AGG - chr3_1:16547518-16547537 Msa0350990:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 16547335 16552194 16547335 ID=Msa0350990;Name=Msa0350990
chr3_1 mRNA 16547335 16552194 16547335 ID=Msa0350990-mRNA-1;Parent=Msa0350990;Name=Msa0350990-mRNA-1;_AED=0.07;_eAED=0.07;_QI=51|0.77|0.8|0.9|0.88|0.8|10|174|229
chr3_1 exon 16547335 16547525 16547335 ID=Msa0350990-mRNA-1:exon:4036;Parent=Msa0350990-mRNA-1
chr3_1 exon 16547622 16547670 16547622 ID=Msa0350990-mRNA-1:exon:4035;Parent=Msa0350990-mRNA-1
chr3_1 exon 16548553 16548651 16548553 ID=Msa0350990-mRNA-1:exon:4034;Parent=Msa0350990-mRNA-1
chr3_1 exon 16549302 16549391 16549302 ID=Msa0350990-mRNA-1:exon:4033;Parent=Msa0350990-mRNA-1
chr3_1 exon 16549622 16549668 16549622 ID=Msa0350990-mRNA-1:exon:4032;Parent=Msa0350990-mRNA-1
chr3_1 exon 16549882 16549935 16549882 ID=Msa0350990-mRNA-1:exon:4031;Parent=Msa0350990-mRNA-1
chr3_1 exon 16550061 16550174 16550061 ID=Msa0350990-mRNA-1:exon:4030;Parent=Msa0350990-mRNA-1
chr3_1 exon 16550713 16550845 16550713 ID=Msa0350990-mRNA-1:exon:4029;Parent=Msa0350990-mRNA-1
chr3_1 exon 16551949 16552048 16551949 ID=Msa0350990-mRNA-1:exon:4028;Parent=Msa0350990-mRNA-1
chr3_1 exon 16552157 16552194 16552157 ID=Msa0350990-mRNA-1:exon:4027;Parent=Msa0350990-mRNA-1
chr3_1 five_prime_UTR 16552157 16552194 16552157 ID=Msa0350990-mRNA-1:five_prime_utr;Parent=Msa0350990-mRNA-1
chr3_1 five_prime_UTR 16552036 16552048 16552036 ID=Msa0350990-mRNA-1:five_prime_utr;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16551949 16552035 16551949 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16550713 16550845 16550713 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16550061 16550174 16550061 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16549882 16549935 16549882 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16549622 16549668 16549622 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16549302 16549391 16549302 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16548553 16548651 16548553 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16547622 16547670 16547622 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 CDS 16547509 16547525 16547509 ID=Msa0350990-mRNA-1:cds;Parent=Msa0350990-mRNA-1
chr3_1 three_prime_UTR 16547335 16547508 16547335 ID=Msa0350990-mRNA-1:three_prime_utr;Parent=Msa0350990-mRNA-1
Gene Sequence

>Msa0350990

ATGGCTGGCAGAGGAGGATGGGGACGGGGACGGGGACGGGGAAGAGGCGCATATGTCCGACCACTTCCATTTGTAGTTTTTCCACAGGATATTGATTTACCTGATGTTAAACACGGAAAAATGGATACTTCTATGAGACAGTTGCTTGAATGGGGTTATGATTTTGATAGATATTTTAAAGTGGCTCCTTATTTCTTGAAGGAGAAGGAAGAATTGAAGGGGCGCAAAAGGATGCACGTAGAAAGATTTTCTGACAAGAAGAAGACCATTTTTACTCGTGATTCTCTGCCACAGGTTTTAGTTTTCGACGAATGTGTTAAGGAGTTGGTTCCAGGTAAAACTAAGCAGATGCTGAGCCGGAAAAAACGTCAATGGAACCCAGAATATGGTGAGAAAAAACTTGCATTGCTAGAGAAGGAGCTCCTGGAAGAGCACAGAAACCTTAGTTTAACACTTCGACAACCTATGTTGTCATCCACCTCTTCTGTCTTCACGGTGGCCATTAGCATTGGCACCACCTATGCTAAAGAGAGTAAACATAAAAAGGAGGAAGAAGATGAAGAAAGTGAAGATGAAGAGGAAAATGAAGAGAGTAGCGAGTCTGGAACTGATGATTATGATAAGAATCATGATGTTGACGACGATGATTTAAATGTTGAAGATTCTGGGGATGATGAACCTGGACTGTAG

Protein sequence

>Msa0350990

MAGRGGWGRGRGRGRGAYVRPLPFVVFPQDIDLPDVKHGKMDTSMRQLLEWGYDFDRYFKVAPYFLKEKEELKGRKRMHVERFSDKKKTIFTRDSLPQVLVFDECVKELVPGKTKQMLSRKKRQWNPEYGEKKLALLEKELLEEHRNLSLTLRQPMLSSTSSVFTVAISIGTTYAKESKHKKEEEDEESEDEEENEESSESGTDDYDKNHDVDDDDLNVEDSGDDEPGL*