Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406880 | XP_024634335.1 | 91.228 | 114 | 10 | 0 | 17 | 130 | 15 | 128 | 1.13e-69 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406880 | A0A396IQ09 | 91.228 | 114 | 10 | 0 | 17 | 130 | 15 | 128 | 5.42e-70 | 222 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006000 | Msa0406880 | 0.811464 | 6.909479e-51 | -8.615850e-47 |
| Msa0006070 | Msa0406880 | 0.803419 | 3.517875e-49 | -8.615850e-47 |
| Msa0014710 | Msa0406880 | 0.811441 | 6.989866e-51 | -8.615850e-47 |
| Msa0015390 | Msa0406880 | 0.806172 | 9.357322e-50 | -8.615850e-47 |
| Msa0017070 | Msa0406880 | 0.803048 | 4.198462e-49 | -8.615850e-47 |
| Msa0017510 | Msa0406880 | 0.833356 | 5.591532e-56 | -8.615850e-47 |
| Msa0020420 | Msa0406880 | 0.805140 | 1.541577e-49 | -8.615850e-47 |
| Msa0021510 | Msa0406880 | 0.807526 | 4.841053e-50 | -8.615850e-47 |
| Msa0022310 | Msa0406880 | 0.808075 | 3.700945e-50 | -8.615850e-47 |
| Msa0028640 | Msa0406880 | 0.802216 | 6.233043e-49 | -8.615850e-47 |
| Msa0028700 | Msa0406880 | 0.814413 | 1.560117e-51 | -8.615850e-47 |
| Msa0032330 | Msa0406880 | 0.805331 | 1.405662e-49 | -8.615850e-47 |
| Msa0050390 | Msa0406880 | 0.812240 | 4.682335e-51 | -8.615850e-47 |
| Msa0054480 | Msa0406880 | 0.802390 | 5.740295e-49 | -8.615850e-47 |
| Msa0084940 | Msa0406880 | 0.806221 | 9.140996e-50 | -8.615850e-47 |
| Msa0092990 | Msa0406880 | 0.801998 | 6.909461e-49 | -8.615850e-47 |
| Msa0101700 | Msa0406880 | 0.805850 | 1.093940e-49 | -8.615850e-47 |
| Msa0101710 | Msa0406880 | 0.822889 | 1.860566e-53 | -8.615850e-47 |
| Msa0101810 | Msa0406880 | -0.817147 | 3.835030e-52 | -8.615850e-47 |
| Msa0105070 | Msa0406880 | 0.802674 | 5.016030e-49 | -8.615850e-47 |
| Msa0106670 | Msa0406880 | 0.802813 | 4.695187e-49 | -8.615850e-47 |
| Msa0115270 | Msa0406880 | 0.831039 | 2.091880e-55 | -8.615850e-47 |
| Msa0116770 | Msa0406880 | 0.826766 | 2.265852e-54 | -8.615850e-47 |
| Msa0135380 | Msa0406880 | 0.802127 | 6.501640e-49 | -8.615850e-47 |
| Msa0136070 | Msa0406880 | 0.822470 | 2.328464e-53 | -8.615850e-47 |
| Msa0140390 | Msa0406880 | 0.821386 | 4.150887e-53 | -8.615850e-47 |
| Msa0147250 | Msa0406880 | 0.807850 | 4.131954e-50 | -8.615850e-47 |
| Msa0150270 | Msa0406880 | 0.807088 | 5.994900e-50 | -8.615850e-47 |
| Msa0150840 | Msa0406880 | 0.811239 | 7.731421e-51 | -8.615850e-47 |
| Msa0156650 | Msa0406880 | -0.808913 | 2.452203e-50 | -8.615850e-47 |
| Msa0157290 | Msa0406880 | 0.832733 | 7.987571e-56 | -8.615850e-47 |
| Msa0160550 | Msa0406880 | 0.817615 | 3.007779e-52 | -8.615850e-47 |
| Msa0165210 | Msa0406880 | 0.817087 | 3.955080e-52 | -8.615850e-47 |
| Msa0165220 | Msa0406880 | 0.834055 | 3.738590e-56 | -8.615850e-47 |
| Msa0169140 | Msa0406880 | -0.800545 | 1.370832e-48 | -8.615850e-47 |
| Msa0171300 | Msa0406880 | 0.806080 | 9.785029e-50 | -8.615850e-47 |
| Msa0172780 | Msa0406880 | 0.802036 | 6.786613e-49 | -8.615850e-47 |
| Msa0173990 | Msa0406880 | 0.830944 | 2.207970e-55 | -8.615850e-47 |
| Msa0178960 | Msa0406880 | 0.831865 | 1.310288e-55 | -8.615850e-47 |
| Msa0178970 | Msa0406880 | 0.822349 | 2.484404e-53 | -8.615850e-47 |
| Msa0180500 | Msa0406880 | 0.805518 | 1.284499e-49 | -8.615850e-47 |
| Msa0197660 | Msa0406880 | 0.824215 | 9.106498e-54 | -8.615850e-47 |
| Msa0215320 | Msa0406880 | -0.843933 | 1.032898e-58 | -8.615850e-47 |
| Msa0215830 | Msa0406880 | 0.824885 | 6.331965e-54 | -8.615850e-47 |
| Msa0220740 | Msa0406880 | 0.819612 | 1.060102e-52 | -8.615850e-47 |
| Msa0222890 | Msa0406880 | 0.833347 | 5.619861e-56 | -8.615850e-47 |
| Msa0223410 | Msa0406880 | -0.816605 | 5.074148e-52 | -8.615850e-47 |
| Msa0226890 | Msa0406880 | 0.810841 | 9.429789e-51 | -8.615850e-47 |
| Msa0233300 | Msa0406880 | 0.815887 | 7.342409e-52 | -8.615850e-47 |
| Msa0366240 | Msa0406880 | 0.805856 | 1.090621e-49 | -8.615850e-47 |
| Msa0372340 | Msa0406880 | 0.809378 | 1.949428e-50 | -8.615850e-47 |
| Msa0376590 | Msa0406880 | 0.805360 | 1.386051e-49 | -8.615850e-47 |
| Msa0388960 | Msa0406880 | 0.811825 | 5.767695e-51 | -8.615850e-47 |
| Msa0390400 | Msa0406880 | -0.805289 | 1.434636e-49 | -8.615850e-47 |
| Msa0395790 | Msa0406880 | 0.800574 | 1.352273e-48 | -8.615850e-47 |
| Msa0397750 | Msa0406880 | 0.802620 | 5.144886e-49 | -8.615850e-47 |
| Msa0398380 | Msa0406880 | 0.814550 | 1.455318e-51 | -8.615850e-47 |
| Msa0402290 | Msa0406880 | 0.814316 | 1.639435e-51 | -8.615850e-47 |
| Msa0404030 | Msa0406880 | 0.831070 | 2.055488e-55 | -8.615850e-47 |
| Msa0406880 | Msa0406930 | 0.829842 | 4.105624e-55 | -8.615850e-47 |
| Msa0406880 | Msa0408110 | 0.809654 | 1.700453e-50 | -8.615850e-47 |
| Msa0406880 | Msa0416300 | 0.806978 | 6.326846e-50 | -8.615850e-47 |
| Msa0406880 | Msa0416650 | 0.806467 | 8.109556e-50 | -8.615850e-47 |
| Msa0406880 | Msa0419820 | 0.806437 | 8.230320e-50 | -8.615850e-47 |
| Msa0406880 | Msa0421780 | -0.811092 | 8.322864e-51 | -8.615850e-47 |
| Msa0406880 | Msa0424320 | 0.800818 | 1.205441e-48 | -8.615850e-47 |
| Msa0406880 | Msa0428080 | 0.801158 | 1.027343e-48 | -8.615850e-47 |
| Msa0406880 | Msa0431670 | 0.806183 | 9.308273e-50 | -8.615850e-47 |
| Msa0406880 | Msa0432770 | 0.813642 | 2.308895e-51 | -8.615850e-47 |
| Msa0406880 | Msa0438200 | 0.832003 | 1.211470e-55 | -8.615850e-47 |
| Msa0406880 | Msa0442850 | 0.830884 | 2.284082e-55 | -8.615850e-47 |
| Msa0406880 | Msa0443920 | 0.812416 | 4.286871e-51 | -8.615850e-47 |
| Msa0406880 | Msa0445280 | 0.817875 | 2.628765e-52 | -8.615850e-47 |
| Msa0406880 | Msa0459770 | -0.800994 | 1.109770e-48 | -8.615850e-47 |
| Msa0406880 | Msa0466390 | 0.861029 | 1.367057e-63 | -8.615850e-47 |
| Msa0406880 | Msa0466400 | 0.805121 | 1.555497e-49 | -8.615850e-47 |
| Msa0406880 | Msa0467900 | -0.808548 | 2.934751e-50 | -8.615850e-47 |
| Msa0406880 | Msa0473240 | 0.811980 | 5.337126e-51 | -8.615850e-47 |
| Msa0406880 | Msa0479340 | 0.800001 | 1.768568e-48 | -8.615850e-47 |
| Msa0406880 | Msa0480000 | 0.810985 | 8.780125e-51 | -8.615850e-47 |
| Msa0406880 | Msa0484780 | 0.822675 | 2.086384e-53 | -8.615850e-47 |
| Msa0406880 | Msa0504020 | 0.801777 | 7.673567e-49 | -8.615850e-47 |
| Msa0406880 | Msa0512750 | 0.815406 | 9.396155e-52 | -8.615850e-47 |
| Msa0406880 | Msa0519000 | 0.803608 | 3.214624e-49 | -8.615850e-47 |
| Msa0406880 | Msa0523940 | 0.824623 | 7.301213e-54 | -8.615850e-47 |
| Msa0406880 | Msa0524890 | -0.804484 | 2.113309e-49 | -8.615850e-47 |
| Msa0406880 | Msa0532330 | 0.801562 | 8.492472e-49 | -8.615850e-47 |
| Msa0406880 | Msa0532350 | 0.812127 | 4.956809e-51 | -8.615850e-47 |
| Msa0406880 | Msa0535030 | 0.810407 | 1.170359e-50 | -8.615850e-47 |
| Msa0406880 | Msa0535060 | 0.814942 | 1.191196e-51 | -8.615850e-47 |
| Msa0406880 | Msa0545700 | 0.807542 | 4.804529e-50 | -8.615850e-47 |
| Msa0406880 | Msa0553220 | -0.816265 | 6.046132e-52 | -8.615850e-47 |
| Msa0406880 | Msa0558690 | 0.825475 | 4.593148e-54 | -8.615850e-47 |
| Msa0406880 | Msa0562440 | 0.844032 | 9.720145e-59 | -8.615850e-47 |
| Msa0406880 | Msa0568820 | 0.801230 | 9.931928e-49 | -8.615850e-47 |
| Msa0406880 | Msa0581760 | 0.802956 | 4.385154e-49 | -8.615850e-47 |
| Msa0406880 | Msa0585000 | -0.814248 | 1.696833e-51 | -8.615850e-47 |
| Msa0406880 | Msa0585500 | 0.804273 | 2.338214e-49 | -8.615850e-47 |
| Msa0406880 | Msa0592440 | 0.803992 | 2.674453e-49 | -8.615850e-47 |
| Msa0406880 | Msa0593650 | 0.838513 | 2.749574e-57 | -8.615850e-47 |
| Msa0406880 | Msa0598460 | 0.812916 | 3.332166e-51 | -8.615850e-47 |
| Msa0406880 | Msa0598780 | 0.812647 | 3.816634e-51 | -8.615850e-47 |
| Msa0406880 | Msa0610430 | 0.825538 | 4.439335e-54 | -8.615850e-47 |
| Msa0406880 | Msa0621490 | 0.801688 | 8.000033e-49 | -8.615850e-47 |
| Msa0406880 | Msa0621590 | 0.832245 | 1.054948e-55 | -8.615850e-47 |
| Msa0406880 | Msa0623080 | 0.812732 | 3.655336e-51 | -8.615850e-47 |
| Msa0406880 | Msa0626090 | 0.811134 | 8.149127e-51 | -8.615850e-47 |
| Msa0406880 | Msa0633840 | 0.802290 | 6.017282e-49 | -8.615850e-47 |
| Msa0406880 | Msa0638070 | 0.816514 | 5.317455e-52 | -8.615850e-47 |
| Msa0406880 | Msa0638280 | 0.822065 | 2.891576e-53 | -8.615850e-47 |
| Msa0406880 | Msa0638320 | 0.820952 | 5.225362e-53 | -8.615850e-47 |
| Msa0406880 | Msa0641670 | 0.809711 | 1.653114e-50 | -8.615850e-47 |
| Msa0406880 | Msa0647450 | -0.826934 | 2.066075e-54 | -8.615850e-47 |
| Msa0406880 | Msa0657970 | 0.804041 | 2.612630e-49 | -8.615850e-47 |
| Msa0406880 | Msa0661190 | -0.827578 | 1.447685e-54 | -8.615850e-47 |
| Msa0406880 | Msa0661650 | 0.816856 | 4.457678e-52 | -8.615850e-47 |
| Msa0406880 | Msa0661870 | 0.802330 | 5.904343e-49 | -8.615850e-47 |
| Msa0406880 | Msa0662650 | 0.821287 | 4.374154e-53 | -8.615850e-47 |
| Msa0406880 | Msa0663380 | 0.824363 | 8.407836e-54 | -8.615850e-47 |
| Msa0406880 | Msa0665170 | 0.805314 | 1.417284e-49 | -8.615850e-47 |
| Msa0406880 | Msa0669850 | 0.800154 | 1.646564e-48 | -8.615850e-47 |
| Msa0406880 | Msa0673460 | 0.811453 | 6.948657e-51 | -8.615850e-47 |
| Msa0406880 | Msa0677270 | 0.810108 | 1.357836e-50 | -8.615850e-47 |
| Msa0406880 | Msa0688480 | 0.806379 | 8.463981e-50 | -8.615850e-47 |
| Msa0406880 | Msa0689010 | 0.801592 | 8.371328e-49 | -8.615850e-47 |
| Msa0406880 | Msa0692830 | 0.800559 | 1.361456e-48 | -8.615850e-47 |
| Msa0406880 | Msa0692950 | 0.803776 | 2.966045e-49 | -8.615850e-47 |
| Msa0406880 | Msa0693380 | 0.800582 | 1.347105e-48 | -8.615850e-47 |
| Msa0406880 | Msa0696640 | 0.818223 | 2.193192e-52 | -8.615850e-47 |
| Msa0406880 | Msa0698920 | 0.805274 | 1.444732e-49 | -8.615850e-47 |
| Msa0406880 | Msa0698930 | 0.807018 | 6.205216e-50 | -8.615850e-47 |
| Msa0406880 | Msa0701010 | 0.823867 | 1.099142e-53 | -8.615850e-47 |
| Msa0406880 | Msa0708860 | 0.818012 | 2.447668e-52 | -8.615850e-47 |
| Msa0406880 | Msa0715470 | 0.816698 | 4.836899e-52 | -8.615850e-47 |
| Msa0406880 | Msa0715700 | 0.812833 | 3.474683e-51 | -8.615850e-47 |
| Msa0406880 | Msa0716840 | 0.830357 | 3.073885e-55 | -8.615850e-47 |
| Msa0406880 | Msa0731940 | 0.826697 | 2.352799e-54 | -8.615850e-47 |
| Msa0406880 | Msa0735170 | 0.842907 | 1.941128e-58 | -8.615850e-47 |
| Msa0406880 | Msa0735560 | 0.810092 | 1.368552e-50 | -8.615850e-47 |
| Msa0406880 | Msa0743720 | 0.828482 | 8.772636e-55 | -8.615850e-47 |
| Msa0406880 | Msa0744170 | -0.802522 | 5.390354e-49 | -8.615850e-47 |
| Msa0406880 | Msa0745790 | 0.828372 | 9.323593e-55 | -8.615850e-47 |
| Msa0406880 | Msa0756630 | -0.807920 | 3.993105e-50 | -8.615850e-47 |
| Msa0406880 | Msa0759410 | 0.800595 | 1.338550e-48 | -8.615850e-47 |
| Msa0406880 | Msa0766630 | 0.821608 | 3.687724e-53 | -8.615850e-47 |
| Msa0406880 | Msa0777230 | 0.821470 | 3.970370e-53 | -8.615850e-47 |
| Msa0406880 | Msa0780400 | 0.807292 | 5.428013e-50 | -8.615850e-47 |
| Msa0406880 | Msa0787470 | 0.818122 | 2.311407e-52 | -8.615850e-47 |
| Msa0406880 | Msa0789570 | 0.801032 | 1.090018e-48 | -8.615850e-47 |
| Msa0406880 | Msa0790660 | -0.806798 | 6.905265e-50 | -8.615850e-47 |
| Msa0406880 | Msa0793800 | 0.811307 | 7.473819e-51 | -8.615850e-47 |
| Msa0406880 | Msa0795090 | 0.820657 | 6.108020e-53 | -8.615850e-47 |
| Msa0406880 | Msa0810220 | 0.820963 | 5.195303e-53 | -8.615850e-47 |
| Msa0406880 | Msa0820850 | 0.808235 | 3.421336e-50 | -8.615850e-47 |
| Msa0406880 | Msa0824680 | 0.803638 | 3.168634e-49 | -8.615850e-47 |
| Msa0406880 | Msa0827040 | 0.825073 | 5.716811e-54 | -8.615850e-47 |
| Msa0406880 | Msa0842650 | 0.809158 | 2.172342e-50 | -8.615850e-47 |
| Msa0406880 | Msa0844450 | 0.802297 | 5.996844e-49 | -8.615850e-47 |
| Msa0406880 | Msa0849030 | 0.816900 | 4.356464e-52 | -8.615850e-47 |
| Msa0406880 | Msa0850960 | 0.814464 | 1.520346e-51 | -8.615850e-47 |
| Msa0406880 | Msa0860410 | 0.813711 | 2.229367e-51 | -8.615850e-47 |
| Msa0406880 | Msa0861130 | 0.805524 | 1.280570e-49 | -8.615850e-47 |
| Msa0406880 | Msa0866550 | 0.826474 | 2.659960e-54 | -8.615850e-47 |
| Msa0406880 | Msa0871270 | 0.840689 | 7.472813e-58 | -8.615850e-47 |
| Msa0406880 | Msa0876200 | 0.800592 | 1.340681e-48 | -8.615850e-47 |
| Msa0406880 | Msa0876580 | 0.824232 | 9.022331e-54 | -8.615850e-47 |
| Msa0406880 | Msa0877250 | 0.817231 | 3.671876e-52 | -8.615850e-47 |
| Msa0406880 | Msa0880140 | 0.828907 | 6.925365e-55 | -8.615850e-47 |
| Msa0406880 | Msa0885280 | 0.818753 | 1.662482e-52 | -8.615850e-47 |
| Msa0406880 | Msa0896750 | 0.803669 | 3.122570e-49 | -8.615850e-47 |
| Msa0406880 | Msa0897330 | 0.801584 | 8.403244e-49 | -8.615850e-47 |
| Msa0406880 | Msa0897880 | 0.838353 | 3.025058e-57 | -8.615850e-47 |
| Msa0406880 | Msa0898670 | 0.813309 | 2.732382e-51 | -8.615850e-47 |
| Msa0406880 | Msa0903620 | 0.802718 | 4.910741e-49 | -8.615850e-47 |
| Msa0406880 | Msa0907070 | 0.840700 | 7.424718e-58 | -8.615850e-47 |
| Msa0406880 | Msa0907260 | 0.804364 | 2.238024e-49 | -8.615850e-47 |
| Msa0406880 | Msa0927380 | 0.817644 | 2.962771e-52 | -8.615850e-47 |
| Msa0406880 | Msa0930460 | -0.828591 | 8.254622e-55 | -8.615850e-47 |
| Msa0406880 | Msa0936300 | 0.837121 | 6.266873e-57 | -8.615850e-47 |
| Msa0406880 | Msa0938220 | 0.853433 | 2.396871e-61 | -8.615850e-47 |
| Msa0406880 | Msa0942200 | 0.802345 | 5.862831e-49 | -8.615850e-47 |
| Msa0406880 | Msa0947660 | 0.821768 | 3.387071e-53 | -8.615850e-47 |
| Msa0406880 | Msa0953120 | 0.807280 | 5.460853e-50 | -8.615850e-47 |
| Msa0406880 | Msa0954130 | 0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa0406880 | Msa0969520 | 0.813954 | 1.970713e-51 | -8.615850e-47 |
| Msa0406880 | Msa0973100 | 0.833149 | 6.295510e-56 | -8.615850e-47 |
| Msa0406880 | Msa0974070 | 0.813992 | 1.932858e-51 | -8.615850e-47 |
| Msa0406880 | Msa0975220 | 0.804401 | 2.198551e-49 | -8.615850e-47 |
| Msa0406880 | Msa0975340 | 0.812147 | 4.906547e-51 | -8.615850e-47 |
| Msa0406880 | Msa0980090 | 0.827807 | 1.275736e-54 | -8.615850e-47 |
| Msa0406880 | Msa0983090 | 0.821856 | 3.231995e-53 | -8.615850e-47 |
| Msa0406880 | Msa0990960 | 0.811369 | 7.245975e-51 | -8.615850e-47 |
| Msa0406880 | Msa0992490 | -0.803398 | 3.552750e-49 | -8.615850e-47 |
| Msa0406880 | Msa0993290 | 0.804629 | 1.970629e-49 | -8.615850e-47 |
| Msa0406880 | Msa0993600 | 0.807946 | 3.942639e-50 | -8.615850e-47 |
| Msa0406880 | Msa0994730 | 0.802867 | 4.576237e-49 | -8.615850e-47 |
| Msa0406880 | Msa0996170 | 0.800186 | 1.621686e-48 | -8.615850e-47 |
| Msa0406880 | Msa0998690 | 0.833190 | 6.147005e-56 | -8.615850e-47 |
| Msa0406880 | Msa1003620 | 0.807288 | 5.437483e-50 | -8.615850e-47 |
| Msa0406880 | Msa1014540 | 0.853928 | 1.727369e-61 | -8.615850e-47 |
| Msa0406880 | Msa1023120 | 0.816621 | 5.031588e-52 | -8.615850e-47 |
| Msa0406880 | Msa1030970 | 0.819253 | 1.279655e-52 | -8.615850e-47 |
| Msa0406880 | Msa1035310 | 0.812446 | 4.221526e-51 | -8.615850e-47 |
| Msa0406880 | Msa1037700 | -0.811074 | 8.394989e-51 | -8.615850e-47 |
| Msa0406880 | Msa1039880 | 0.800638 | 1.311963e-48 | -8.615850e-47 |
| Msa0406880 | Msa1043920 | 0.800949 | 1.133682e-48 | -8.615850e-47 |
| Msa0406880 | Msa1046300 | 0.830872 | 2.299044e-55 | -8.615850e-47 |
| Msa0406880 | Msa1054990 | 0.806984 | 6.308336e-50 | -8.615850e-47 |
| Msa0406880 | Msa1075220 | -0.829694 | 4.459672e-55 | -8.615850e-47 |
| Msa0406880 | Msa1075540 | 0.811791 | 5.866821e-51 | -8.615850e-47 |
| Msa0406880 | Msa1082500 | 0.821776 | 3.372354e-53 | -8.615850e-47 |
| Msa0406880 | Msa1082580 | 0.840405 | 8.868045e-58 | -8.615850e-47 |
| Msa0406880 | Msa1085300 | 0.809045 | 2.296695e-50 | -8.615850e-47 |
| Msa0406880 | Msa1085740 | 0.810941 | 8.973028e-51 | -8.615850e-47 |
| Msa0406880 | Msa1095480 | 0.802289 | 6.020101e-49 | -8.615850e-47 |
| Msa0406880 | Msa1097800 | 0.800978 | 1.118074e-48 | -8.615850e-47 |
| Msa0406880 | Msa1103980 | 0.800295 | 1.541095e-48 | -8.615850e-47 |
| Msa0406880 | Msa1113170 | 0.807948 | 3.939061e-50 | -8.615850e-47 |
| Msa0406880 | Msa1114710 | 0.815874 | 7.393412e-52 | -8.615850e-47 |
| Msa0406880 | Msa1116130 | -0.814069 | 1.858762e-51 | -8.615850e-47 |
| Msa0406880 | Msa1116440 | 0.807716 | 4.412231e-50 | -8.615850e-47 |
| Msa0406880 | Msa1119480 | 0.819065 | 1.412555e-52 | -8.615850e-47 |
| Msa0406880 | Msa1121490 | 0.801420 | 9.078769e-49 | -8.615850e-47 |
| Msa0406880 | Msa1136090 | 0.810887 | 9.219749e-51 | -8.615850e-47 |
| Msa0406880 | Msa1137570 | 0.822822 | 1.928021e-53 | -8.615850e-47 |
| Msa0406880 | Msa1137600 | 0.806695 | 7.260279e-50 | -8.615850e-47 |
| Msa0406880 | Msa1139000 | -0.803325 | 3.678640e-49 | -8.615850e-47 |
| Msa0406880 | Msa1147900 | 0.807058 | 6.082846e-50 | -8.615850e-47 |
| Msa0406880 | Msa1154280 | 0.804533 | 2.063767e-49 | -8.615850e-47 |
| Msa0406880 | Msa1156020 | 0.830092 | 3.567955e-55 | -8.615850e-47 |
| Msa0406880 | Msa1162550 | -0.830058 | 3.636483e-55 | -8.615850e-47 |
| Msa0406880 | Msa1172230 | 0.809048 | 2.294291e-50 | -8.615850e-47 |
| Msa0406880 | Msa1174040 | 0.828410 | 9.129753e-55 | -8.615850e-47 |
| Msa0406880 | Msa1179120 | 0.809404 | 1.924348e-50 | -8.615850e-47 |
| Msa0406880 | Msa1179460 | 0.810366 | 1.194531e-50 | -8.615850e-47 |
| Msa0406880 | Msa1181550 | 0.805388 | 1.367442e-49 | -8.615850e-47 |
| Msa0406880 | Msa1182260 | 0.802588 | 5.224757e-49 | -8.615850e-47 |
| Msa0406880 | Msa1186950 | -0.854824 | 9.514941e-62 | -8.615850e-47 |
| Msa0406880 | Msa1190400 | 0.808809 | 2.580167e-50 | -8.615850e-47 |
| Msa0406880 | Msa1193290 | 0.816492 | 5.378788e-52 | -8.615850e-47 |
| Msa0406880 | Msa1203250 | 0.805632 | 1.215558e-49 | -8.615850e-47 |
| Msa0406880 | Msa1204980 | -0.803060 | 4.174003e-49 | -8.615850e-47 |
| Msa0406880 | Msa1205010 | -0.805059 | 1.602750e-49 | -8.615850e-47 |
| Msa0406880 | Msa1205130 | 0.812287 | 4.574889e-51 | -8.615850e-47 |
| Msa0406880 | Msa1217860 | 0.812264 | 4.626413e-51 | -8.615850e-47 |
| Msa0406880 | Msa1226660 | 0.817185 | 3.758865e-52 | -8.615850e-47 |
| Msa0406880 | Msa1228590 | 0.803502 | 3.381230e-49 | -8.615850e-47 |
| Msa0406880 | Msa1229600 | 0.814773 | 1.298994e-51 | -8.615850e-47 |
| Msa0406880 | Msa1231240 | 0.807722 | 4.400054e-50 | -8.615850e-47 |
| Msa0406880 | Msa1233500 | 0.800082 | 1.702908e-48 | -8.615850e-47 |
| Msa0406880 | Msa1233890 | 0.838434 | 2.882659e-57 | -8.615850e-47 |
| Msa0406880 | Msa1238930 | 0.817259 | 3.617932e-52 | -8.615850e-47 |
| Msa0406880 | Msa1244250 | 0.829537 | 4.870971e-55 | -8.615850e-47 |
| Msa0406880 | Msa1249490 | 0.849987 | 2.271650e-60 | -8.615850e-47 |
| Msa0406880 | Msa1250890 | 0.800655 | 1.301660e-48 | -8.615850e-47 |
| Msa0406880 | Msa1264020 | 0.807816 | 4.202364e-50 | -8.615850e-47 |
| Msa0406880 | Msa1271210 | 0.830248 | 3.268619e-55 | -8.615850e-47 |
| Msa0406880 | Msa1273920 | 0.816543 | 5.237572e-52 | -8.615850e-47 |
| Msa0406880 | Msa1275360 | 0.809089 | 2.248332e-50 | -8.615850e-47 |
| Msa0406880 | Msa1277660 | 0.815045 | 1.130478e-51 | -8.615850e-47 |
| Msa0406880 | Msa1279210 | 0.809007 | 2.341043e-50 | -8.615850e-47 |
| Msa0406880 | Msa1280130 | 0.803149 | 4.001716e-49 | -8.615850e-47 |
| Msa0406880 | Msa1281510 | 0.819648 | 1.040245e-52 | -8.615850e-47 |
| Msa0406880 | Msa1282580 | -0.824771 | 6.738096e-54 | -8.615850e-47 |
| Msa0406880 | Msa1284680 | 0.830539 | 2.774234e-55 | -8.615850e-47 |
| Msa0406880 | Msa1289650 | 0.800159 | 1.642674e-48 | -8.615850e-47 |
| Msa0406880 | Msa1305340 | 0.800754 | 1.242557e-48 | -8.615850e-47 |
| Msa0406880 | Msa1306760 | 0.821171 | 4.651759e-53 | -8.615850e-47 |
| Msa0406880 | Msa1306850 | 0.804474 | 2.123315e-49 | -8.615850e-47 |
| Msa0406880 | Msa1308580 | 0.802373 | 5.786342e-49 | -8.615850e-47 |
| Msa0406880 | Msa1308620 | 0.818520 | 1.877650e-52 | -8.615850e-47 |
| Msa0406880 | Msa1310210 | 0.814376 | 1.590302e-51 | -8.615850e-47 |
| Msa0406880 | Msa1312560 | 0.801244 | 9.865824e-49 | -8.615850e-47 |
| Msa0406880 | Msa1314170 | 0.832659 | 8.331772e-56 | -8.615850e-47 |
| Msa0406880 | Msa1323190 | 0.800162 | 1.640368e-48 | -8.615850e-47 |
| Msa0406880 | Msa1327050 | 0.800830 | 1.199100e-48 | -8.615850e-47 |
| Msa0406880 | Msa1328700 | 0.804571 | 2.026127e-49 | -8.615850e-47 |
| Msa0406880 | Msa1340470 | 0.808550 | 2.931057e-50 | -8.615850e-47 |
| Msa0406880 | Msa1346370 | 0.817907 | 2.584210e-52 | -8.615850e-47 |
| Msa0406880 | Msa1348950 | 0.813843 | 2.084735e-51 | -8.615850e-47 |
| Msa0406880 | Msa1351620 | 0.860324 | 2.236796e-63 | -8.615850e-47 |
| Msa0406880 | Msa1353470 | 0.808128 | 3.606861e-50 | -8.615850e-47 |
| Msa0406880 | Msa1359040 | 0.819421 | 1.171814e-52 | -8.615850e-47 |
| Msa0406880 | Msa1362880 | 0.863285 | 2.775499e-64 | -8.615850e-47 |
| Msa0406880 | Msa1369530 | 0.848202 | 7.122038e-60 | -8.615850e-47 |
| Msa0406880 | Msa1371430 | 0.811421 | 7.061000e-51 | -8.615850e-47 |
| Msa0406880 | Msa1372760 | 0.803697 | 3.079986e-49 | -8.615850e-47 |
| Msa0406880 | Msa1374100 | 0.812487 | 4.135981e-51 | -8.615850e-47 |
| Msa0406880 | Msa1393410 | 0.812463 | 4.186867e-51 | -8.615850e-47 |
| Msa0406880 | Msa1394730 | 0.833255 | 5.924214e-56 | -8.615850e-47 |
| Msa0406880 | Msa1410100 | 0.811504 | 6.773965e-51 | -8.615850e-47 |
| Msa0406880 | Msa1411020 | 0.806038 | 9.987462e-50 | -8.615850e-47 |
| Msa0406880 | Msa1415640 | 0.802096 | 6.597149e-49 | -8.615850e-47 |
| Msa0406880 | Msa1424750 | 0.810254 | 1.263304e-50 | -8.615850e-47 |
| Msa0406880 | Msa1427230 | 0.800425 | 1.449945e-48 | -8.615850e-47 |
| Msa0406880 | Msa1434350 | 0.801635 | 8.203425e-49 | -8.615850e-47 |
| Msa0406880 | Msa1435420 | 0.811413 | 7.089466e-51 | -8.615850e-47 |
| Msa0406880 | Msa1438700 | 0.800786 | 1.224224e-48 | -8.615850e-47 |
| Msa0406880 | Msa1439320 | 0.805152 | 1.532153e-49 | -8.615850e-47 |
| Msa0406880 | Msa1439960 | 0.800700 | 1.274239e-48 | -8.615850e-47 |
| Msa0406880 | Msa1441190 | 0.817385 | 3.389799e-52 | -8.615850e-47 |
| Msa0406880 | Msa1451620 | -0.834644 | 2.659911e-56 | -8.615850e-47 |
| Msa0406880 | Msa1455490 | 0.831210 | 1.899183e-55 | -8.615850e-47 |
| Msa0406880 | Msa1460830 | 0.801032 | 1.090052e-48 | -8.615850e-47 |
| Msa0406880 | Msa1461300 | 0.814103 | 1.826926e-51 | -8.615850e-47 |
| Msa0406880 | Msa1466540 | 0.822603 | 2.168664e-53 | -8.615850e-47 |
| Msa0239800 | Msa0406880 | 0.819323 | 1.233372e-52 | -8.615850e-47 |
| Msa0241640 | Msa0406880 | 0.847355 | 1.218914e-59 | -8.615850e-47 |
| Msa0258760 | Msa0406880 | 0.805966 | 1.033942e-49 | -8.615850e-47 |
| Msa0264150 | Msa0406880 | 0.813550 | 2.418201e-51 | -8.615850e-47 |
| Msa0269450 | Msa0406880 | 0.815374 | 9.552559e-52 | -8.615850e-47 |
| Msa0271530 | Msa0406880 | 0.810614 | 1.056106e-50 | -8.615850e-47 |
| Msa0272530 | Msa0406880 | 0.812598 | 3.910798e-51 | -8.615850e-47 |
| Msa0275000 | Msa0406880 | 0.801851 | 7.409389e-49 | -8.615850e-47 |
| Msa0277820 | Msa0406880 | 0.804826 | 1.793032e-49 | -8.615850e-47 |
| Msa0279700 | Msa0406880 | 0.805348 | 1.393850e-49 | -8.615850e-47 |
| Msa0279790 | Msa0406880 | 0.873401 | 1.512765e-67 | -8.615850e-47 |
| Msa0280090 | Msa0406880 | 0.803692 | 3.087070e-49 | -8.615850e-47 |
| Msa0288100 | Msa0406880 | 0.847167 | 1.372827e-59 | -8.615850e-47 |
| Msa0289250 | Msa0406880 | 0.800895 | 1.162891e-48 | -8.615850e-47 |
| Msa0294560 | Msa0406880 | -0.814784 | 1.291376e-51 | -8.615850e-47 |
| Msa0299870 | Msa0406880 | 0.812023 | 5.221918e-51 | -8.615850e-47 |
| Msa0303380 | Msa0406880 | 0.820405 | 6.978224e-53 | -8.615850e-47 |
| Msa0306210 | Msa0406880 | -0.800755 | 1.241691e-48 | -8.615850e-47 |
| Msa0317510 | Msa0406880 | 0.825644 | 4.189249e-54 | -8.615850e-47 |
| Msa0321310 | Msa0406880 | 0.808309 | 3.299231e-50 | -8.615850e-47 |
| Msa0321860 | Msa0406880 | 0.803468 | 3.436281e-49 | -8.615850e-47 |
| Msa0323080 | Msa0406880 | 0.838372 | 2.990014e-57 | -8.615850e-47 |
| Msa0333030 | Msa0406880 | 0.830415 | 2.974655e-55 | -8.615850e-47 |
| Msa0337620 | Msa0406880 | 0.812294 | 4.558419e-51 | -8.615850e-47 |
| Msa0339250 | Msa0406880 | 0.802274 | 6.064611e-49 | -8.615850e-47 |
| Msa0340450 | Msa0406880 | 0.847193 | 1.349794e-59 | -8.615850e-47 |
| Msa0342100 | Msa0406880 | 0.811290 | 7.537167e-51 | -8.615850e-47 |
| Msa0344830 | Msa0406880 | 0.848148 | 7.373607e-60 | -8.615850e-47 |
| Msa0350990 | Msa0406880 | 0.942078 | 1.356883e-101 | -8.615850e-47 |
| Msa0351030 | Msa0406880 | 0.945938 | 1.193081e-104 | -8.615850e-47 |
| Msa0351080 | Msa0406880 | 0.882868 | 7.258773e-71 | -8.615850e-47 |
| Msa0351090 | Msa0406880 | 0.851051 | 1.141640e-60 | -8.615850e-47 |
| Msa0351100 | Msa0406880 | 0.941276 | 5.512067e-101 | -8.615850e-47 |
| Msa0351810 | Msa0406880 | 0.803963 | 2.712602e-49 | -8.615850e-47 |
| Msa0355220 | Msa0406880 | 0.807966 | 3.903576e-50 | -8.615850e-47 |
| Msa0358170 | Msa0406880 | 0.810107 | 1.358684e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406880 | MtrunA17_Chr3g0085891 | 91.228 | 114 | 10 | 0 | 17 | 130 | 15 | 128 | 1.04e-73 | 222 |
| Msa0406880 | MtrunA17_Chr1g0160891 | 66.667 | 135 | 36 | 4 | 17 | 146 | 17 | 147 | 1.30e-52 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 66 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTAAATGTTGAAGATTC+TGG | 0.196464 | 3_2:-43825493 | Msa0406880:CDS |
| TCCTTCTCCTTCAAGAAATA+AGG | 0.229085 | 3_2:+43828590 | None:intergenic |
| CATATGAAATCACCATATTC+TGG | 0.262324 | 3_2:+43827735 | None:intergenic |
| GAAAGAGAGTAAACATAAAA+AGG | 0.285268 | 3_2:-43826496 | Msa0406880:CDS |
| CGGGGACGAGGACGGGGAAG+AGG | 0.288193 | 3_2:-43829873 | Msa0406880:CDS |
| TTGGAACCGTCGCCGTTTAC+AGG | 0.294903 | 3_2:-43830038 | Msa0406880:intron |
| TAGCATGGACTATTGATTCT+AGG | 0.300006 | 3_2:-43825318 | Msa0406880:three_prime_UTR |
| CGTCAATGGAACCCAGAATA+TGG | 0.322177 | 3_2:-43827747 | Msa0406880:intron |
| TGTGTTAAGGAGTTGGTTCC+AGG | 0.329012 | 3_2:-43827926 | Msa0406880:intron |
| TCATAACGTAGCGAACTTCT+TGG | 0.339090 | 3_2:-43830065 | None:intergenic |
| ATGGGGACGGGGACGAGGAC+GGG | 0.362568 | 3_2:-43829880 | Msa0406880:CDS |
| GTCATCAACTACAATTCTTC+TGG | 0.366455 | 3_2:+43825221 | None:intergenic |
| GTAGGCATACGTGCTCTTCC+AGG | 0.366856 | 3_2:+43827478 | None:intergenic |
| TGGGGACGGGGACGAGGACG+GGG | 0.369102 | 3_2:-43829879 | Msa0406880:CDS |
| CTATGAGACAGTTGCTTGAA+TGG | 0.378644 | 3_2:-43828646 | Msa0406880:CDS |
| ATTTAAATGTTGAAGATTCT+GGG | 0.382185 | 3_2:-43825492 | Msa0406880:CDS |
| GGCAGAGGAGGATGGGGACG+GGG | 0.384213 | 3_2:-43829891 | Msa0406880:CDS |
| GGAGGATGGGGACGGGGACG+AGG | 0.384499 | 3_2:-43829885 | Msa0406880:CDS |
| ATCCACCTCTTCTGTCTTCA+CGG | 0.399427 | 3_2:-43827197 | Msa0406880:CDS |
| TGGCAGAGGAGGATGGGGAC+GGG | 0.402946 | 3_2:-43829892 | Msa0406880:CDS |
| AATGAAGAGAGTAGCGAGTC+TGG | 0.412583 | 3_2:-43826438 | Msa0406880:CDS |
| TATGAGACAGTTGCTTGAAT+GGG | 0.420424 | 3_2:-43828645 | Msa0406880:CDS |
| GTAAAGAATCACTACAGTTC+AGG | 0.435840 | 3_2:+43825364 | None:intergenic |
| CGACGAATGTGTTAAGGAGT+TGG | 0.450423 | 3_2:-43827933 | Msa0406880:CDS |
| GTTGTCGAAGTGTTAAACTA+AGG | 0.451201 | 3_2:+43827230 | None:intergenic |
| TACTCGTGATTCTCTGCCAC+AGG | 0.453424 | 3_2:-43827966 | Msa0406880:CDS |
| GAAGGAGAAGGAAGAATTGA+AGG | 0.454002 | 3_2:-43828579 | Msa0406880:CDS |
| TGAAGAAAGTGAAGATGAAG+AGG | 0.461729 | 3_2:-43826463 | Msa0406880:CDS |
| AATGGCTGGCAGAGGAGGAT+GGG | 0.472479 | 3_2:-43829898 | Msa0406880:CDS |
| AGTGGCTCCTTATTTCTTGA+AGG | 0.473271 | 3_2:-43828597 | Msa0406880:CDS |
| CTGGCAGAGGAGGATGGGGA+CGG | 0.475505 | 3_2:-43829893 | Msa0406880:CDS |
| TAGCGAACTTCTTGGAAAGT+TGG | 0.476575 | 3_2:-43830057 | Msa0406880:five_prime_UTR |
| CTTAATTGTCAGGGCGCAAA+AGG | 0.477030 | 3_2:-43828030 | Msa0406880:intron |
| TTCACGGTGGCCATTAGCAT+TGG | 0.478779 | 3_2:-43827181 | Msa0406880:CDS |
| ATATGAAATCACCATATTCT+GGG | 0.482590 | 3_2:+43827736 | None:intergenic |
| AAATGGCTGGCAGAGGAGGA+TGG | 0.482599 | 3_2:-43829899 | Msa0406880:CDS |
| ATAGGTGGTGCCAATGCTAA+TGG | 0.484801 | 3_2:+43827171 | None:intergenic |
| ATTGCTAGAGAAGGAGCTCC+TGG | 0.499023 | 3_2:-43827496 | Msa0406880:CDS |
| AATGTTGAAGATTCTGGGGA+TGG | 0.506964 | 3_2:-43825487 | Msa0406880:intron |
| GATGGGGACGGGGACGAGGA+CGG | 0.511375 | 3_2:-43829881 | Msa0406880:CDS |
| AAACTAAGCAGATGCTGAGC+CGG | 0.515920 | 3_2:-43827776 | Msa0406880:CDS |
| GAAGAATTGTAGTTGATGAC+AGG | 0.516196 | 3_2:-43825218 | Msa0406880:three_prime_UTR |
| GCTTAGACTTCGTAAATGGC+TGG | 0.518113 | 3_2:-43829912 | Msa0406880:intron |
| TGGAACTGATGATTATGATA+AGG | 0.518462 | 3_2:-43826418 | Msa0406880:intron |
| ATGGCTGGCAGAGGAGGATG+GGG | 0.521277 | 3_2:-43829897 | Msa0406880:CDS |
| TCCTTATTTCTTGAAGGAGA+AGG | 0.526141 | 3_2:-43828591 | Msa0406880:CDS |
| GTCCGAGAGATACCTGTAAA+CGG | 0.535958 | 3_2:+43830026 | None:intergenic |
| TCGTAAATGGCTGGCAGAGG+AGG | 0.549677 | 3_2:-43829903 | Msa0406880:exon |
| ACTTCGTAAATGGCTGGCAG+AGG | 0.569519 | 3_2:-43829906 | Msa0406880:exon |
| TGGCTGCTTCTATACTAGCA+TGG | 0.576173 | 3_2:-43825333 | Msa0406880:three_prime_UTR |
| AAAACTTGCATTGCTAGAGA+AGG | 0.581983 | 3_2:-43827505 | Msa0406880:CDS |
| AAGGAGAAGGAAGAATTGAA+GGG | 0.585858 | 3_2:-43828578 | Msa0406880:intron |
| AAATTACAAATGGAAGTGGT+CGG | 0.588602 | 3_2:+43829841 | None:intergenic |
| GTGATTCTTTACTCATCCTG+TGG | 0.597923 | 3_2:-43825353 | Msa0406880:three_prime_UTR |
| ATGAGACAGTTGCTTGAATG+GGG | 0.600528 | 3_2:-43828644 | Msa0406880:CDS |
| GATTTACCTGATGTTAAACA+CGG | 0.617922 | 3_2:-43828683 | Msa0406880:CDS |
| GCTAGTATAGAAGCAGCCAC+AGG | 0.632363 | 3_2:+43825337 | None:intergenic |
| TTTAAATGTTGAAGATTCTG+GGG | 0.632918 | 3_2:-43825491 | Msa0406880:CDS |
| TCAAGCAGCAAGTTTAACAA+AGG | 0.635144 | 3_2:+43825244 | None:intergenic |
| CACCGTGAAGACAGAAGAGG+TGG | 0.639837 | 3_2:+43827195 | None:intergenic |
| GAAGAGGTGGATGACAACAT+AGG | 0.646634 | 3_2:+43827208 | None:intergenic |
| GAGATACCTGTAAACGGCGA+CGG | 0.655045 | 3_2:+43830032 | None:intergenic |
| AAATGTGTTGACAGCATAGG+TGG | 0.658323 | 3_2:+43827156 | None:intergenic |
| TCGTCGAAAACTAAAACCTG+TGG | 0.697134 | 3_2:+43827950 | None:intergenic |
| GGCCACCGTGAAGACAGAAG+AGG | 0.698678 | 3_2:+43827192 | None:intergenic |
| CACCTCTTCTGTCTTCACGG+TGG | 0.731098 | 3_2:-43827194 | Msa0406880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATTAAAAAAACA+AGG | + | chr3_2:43825652-43825671 | None:intergenic | 10.0% |
| !! | AACAATAAATTTACAATCAA+AGG | + | chr3_2:43825257-43825276 | None:intergenic | 15.0% |
| !!! | AATTAAGTTGTTTATTGAAA+CGG | + | chr3_2:43825464-43825483 | None:intergenic | 15.0% |
| !!! | TTTTGATAGATATTTTAAAG+TGG | - | chr3_2:43826640-43826659 | Msa0406880:intron | 15.0% |
| !! | CTTTAAACAATAATATATCA+TGG | + | chr3_2:43827044-43827063 | None:intergenic | 15.0% |
| !!! | CAAATAATTTAGAACTAAAT+TGG | - | chr3_2:43827444-43827463 | Msa0406880:intron | 15.0% |
| !! | TTGTTAACGTTAAAAAATAA+GGG | + | chr3_2:43827811-43827830 | None:intergenic | 15.0% |
| !! | TTTGTTAACGTTAAAAAATA+AGG | + | chr3_2:43827812-43827831 | None:intergenic | 15.0% |
| !!! | TTTTTTAACGTTAACAAAAT+AGG | - | chr3_2:43827814-43827833 | Msa0406880:intron | 15.0% |
| !!! | TTTTTAACGTTAACAAAATA+GGG | - | chr3_2:43827815-43827834 | Msa0406880:intron | 15.0% |
| !! | CATAATATATATTATGAAGA+AGG | - | chr3_2:43828982-43829001 | Msa0406880:intron | 15.0% |
| !! | AAAAGAAATCATATTAAACT+TGG | - | chr3_2:43829428-43829447 | Msa0406880:intron | 15.0% |
| !! | GAAAATGAAAAAAAAAATCT+TGG | + | chr3_2:43829683-43829702 | None:intergenic | 15.0% |
| !!! | TTTTTCATTTTCGTATTAAA+AGG | - | chr3_2:43829691-43829710 | Msa0406880:intron | 15.0% |
| !! | TTGATTTATTTATGCTTATC+TGG | + | chr3_2:43826298-43826317 | None:intergenic | 20.0% |
| !! | AAATGTAAGGAATTATAGTA+CGG | + | chr3_2:43826347-43826366 | None:intergenic | 20.0% |
| !! | GAAATATAGAAATAGTTATG+AGG | + | chr3_2:43826417-43826436 | None:intergenic | 20.0% |
| !! | ACAGAAAATAGATAATTACA+CGG | + | chr3_2:43826513-43826532 | None:intergenic | 20.0% |
| !! | TCACAATATATATCATGTAA+AGG | + | chr3_2:43826717-43826736 | None:intergenic | 20.0% |
| !!! | ATTGTTTAAAGTATCTAACA+TGG | - | chr3_2:43827053-43827072 | Msa0406880:intron | 20.0% |
| !!! | GAATATTTTCAATGCTTATA+TGG | - | chr3_2:43827158-43827177 | Msa0406880:intron | 20.0% |
| !!! | CACATTTTTAATGTTATAAC+AGG | - | chr3_2:43828115-43828134 | Msa0406880:intron | 20.0% |
| !!! | ATTTTTAATGTTATAACAGG+AGG | - | chr3_2:43828118-43828137 | Msa0406880:intron | 20.0% |
| !! | TGTTCGAATTATAGAATAAA+GGG | - | chr3_2:43828383-43828402 | Msa0406880:intron | 20.0% |
| !!! | TTCAATTTGAAAATTTTGTG+GGG | + | chr3_2:43828944-43828963 | None:intergenic | 20.0% |
| !!! | CTTCAATTTGAAAATTTTGT+GGG | + | chr3_2:43828945-43828964 | None:intergenic | 20.0% |
| !!! | ACTTCAATTTGAAAATTTTG+TGG | + | chr3_2:43828946-43828965 | None:intergenic | 20.0% |
| !!! | GTTTTTTTAACATTTAGAGA+CGG | + | chr3_2:43829065-43829084 | None:intergenic | 20.0% |
| !! | AAATGTTAAAAAAACCTCTA+CGG | - | chr3_2:43829070-43829089 | Msa0406880:intron | 20.0% |
| !! | TATACAGTTTGTAATGATAT+TGG | + | chr3_2:43829314-43829333 | None:intergenic | 20.0% |
| !! | ATGTAAGTTGTTTGTAAATT+TGG | - | chr3_2:43829519-43829538 | Msa0406880:intron | 20.0% |
| !!! | TTTGGATTTTAGAAATGTAT+AGG | - | chr3_2:43829537-43829556 | Msa0406880:intron | 20.0% |
| !!! | TTGGATTTTAGAAATGTATA+GGG | - | chr3_2:43829538-43829557 | Msa0406880:intron | 20.0% |
| !!! | CTGCAAAATTTTAATTTAGT+TGG | + | chr3_2:43829721-43829740 | None:intergenic | 20.0% |
| !! | ATTTAAATGTTGAAGATTCT+GGG | - | chr3_2:43829763-43829782 | Msa0406880:intron | 20.0% |
| ! | AAATATTTCTCGTATCTATG+TGG | - | chr3_2:43825574-43825593 | Msa0406880:intron | 25.0% |
| !! | AAAACAAGGTCTTATAATCT+AGG | + | chr3_2:43825638-43825657 | None:intergenic | 25.0% |
| ! | GGACTTATTGAAAACAAATT+AGG | - | chr3_2:43825754-43825773 | Msa0406880:intron | 25.0% |
| ! | GTTTCTTTCATAAACTATGA+TGG | - | chr3_2:43826078-43826097 | Msa0406880:intron | 25.0% |
| ! | TTATAGACATGCAATAAGAT+GGG | - | chr3_2:43826128-43826147 | Msa0406880:intron | 25.0% |
| ! | ACATGATATATATTGTGAGA+TGG | - | chr3_2:43826719-43826738 | Msa0406880:intron | 25.0% |
| !! | GTCCTCTAAAAATTTGAATA+TGG | - | chr3_2:43826793-43826812 | Msa0406880:intron | 25.0% |
| !!! | AGCCATATTCAAATTTTTAG+AGG | + | chr3_2:43826798-43826817 | None:intergenic | 25.0% |
| !!! | GGTCAAATTTTAATCTTTGA+GGG | + | chr3_2:43826861-43826880 | None:intergenic | 25.0% |
| !!! | TGGTCAAATTTTAATCTTTG+AGG | + | chr3_2:43826862-43826881 | None:intergenic | 25.0% |
| !! | ATGTCTTTGGAAGATTATTA+CGG | - | chr3_2:43826978-43826997 | Msa0406880:intron | 25.0% |
| !! | GAATAATGGAATAGGATTTA+CGG | - | chr3_2:43827355-43827374 | Msa0406880:intron | 25.0% |
| !! | AATAATGGAATAGGATTTAC+GGG | - | chr3_2:43827356-43827375 | Msa0406880:intron | 25.0% |
| !! | TACTTTTCTTTATGCATTTG+AGG | - | chr3_2:43827411-43827430 | Msa0406880:intron | 25.0% |
| !! | AGAACTAAATTGGTAATTTC+AGG | - | chr3_2:43827454-43827473 | Msa0406880:intron | 25.0% |
| ! | ATATGAAATCACCATATTCT+GGG | + | chr3_2:43827522-43827541 | None:intergenic | 25.0% |
| ! | TTGATCATTCTATGTACATA+TGG | - | chr3_2:43827657-43827676 | Msa0406880:intron | 25.0% |
| ! | ATATTATCCATGTTATGAGT+TGG | - | chr3_2:43827687-43827706 | Msa0406880:intron | 25.0% |
| ! | TTAAGGAATCAAAAAATGAC+TGG | + | chr3_2:43827850-43827869 | None:intergenic | 25.0% |
| ! | TAATATTGTGTTACGAGATA+TGG | - | chr3_2:43827893-43827912 | Msa0406880:intron | 25.0% |
| ! | AATTGACAAAACTATCCATT+AGG | - | chr3_2:43828241-43828260 | Msa0406880:intron | 25.0% |
| ! | GTGTTCGAATTATAGAATAA+AGG | - | chr3_2:43828382-43828401 | Msa0406880:intron | 25.0% |
| ! | TTGCTAGTTAGATTTCTATT+TGG | - | chr3_2:43828490-43828509 | Msa0406880:intron | 25.0% |
| ! | TGCTAGTTAGATTTCTATTT+GGG | - | chr3_2:43828491-43828510 | Msa0406880:intron | 25.0% |
| !! | TCTGTTGTATTTTCTGTTAT+TGG | - | chr3_2:43828522-43828541 | Msa0406880:intron | 25.0% |
| ! | GCATATATCATAGTTGTAAT+TGG | - | chr3_2:43828636-43828655 | Msa0406880:CDS | 25.0% |
| ! | GAAAGAGAGTAAACATAAAA+AGG | - | chr3_2:43828759-43828778 | Msa0406880:intron | 25.0% |
| ! | AAAATTAACACTCAAAGTAG+AGG | + | chr3_2:43828874-43828893 | None:intergenic | 25.0% |
| !!! | CTGTTTTGAGATAAAATTAG+TGG | - | chr3_2:43829020-43829039 | Msa0406880:intron | 25.0% |
| ! | ATAGTAAGCTTCATCAATTA+TGG | - | chr3_2:43829125-43829144 | Msa0406880:intron | 25.0% |
| ! | GAATGGTAAACATAACATTT+GGG | + | chr3_2:43829202-43829221 | None:intergenic | 25.0% |
| ! | AGAATGGTAAACATAACATT+TGG | + | chr3_2:43829203-43829222 | None:intergenic | 25.0% |
| ! | AGTATGTGTAATATTTGTAG+GGG | + | chr3_2:43829391-43829410 | None:intergenic | 25.0% |
| ! | CAGTATGTGTAATATTTGTA+GGG | + | chr3_2:43829392-43829411 | None:intergenic | 25.0% |
| ! | ACAGTATGTGTAATATTTGT+AGG | + | chr3_2:43829393-43829412 | None:intergenic | 25.0% |
| ! | GATTTAAATGTTGAAGATTC+TGG | - | chr3_2:43829762-43829781 | Msa0406880:intron | 25.0% |
| ! | TTTAAATGTTGAAGATTCTG+GGG | - | chr3_2:43829764-43829783 | Msa0406880:intron | 25.0% |
| ! | TTTTGCTTAGACTTCGTAAA+TGG | - | chr3_2:43825339-43825358 | Msa0406880:three_prime_UTR | 30.0% |
| AAATTACAAATGGAAGTGGT+CGG | + | chr3_2:43825417-43825436 | None:intergenic | 30.0% | |
| GGAAAAATTACAAATGGAAG+TGG | + | chr3_2:43825421-43825440 | None:intergenic | 30.0% | |
| ! | TCCATTTGTAATTTTTCCAC+AGG | - | chr3_2:43825423-43825442 | Msa0406880:intron | 30.0% |
| ACCTGTGGAAAAATTACAAA+TGG | + | chr3_2:43825427-43825446 | None:intergenic | 30.0% | |
| ! | GATTTTAAATTCTGCTAACG+AGG | - | chr3_2:43825687-43825706 | Msa0406880:intron | 30.0% |
| GAATATTTGTGATAGAGAGA+AGG | - | chr3_2:43825730-43825749 | Msa0406880:intron | 30.0% | |
| AATCTATCACATAGAGCTTA+TGG | - | chr3_2:43825840-43825859 | Msa0406880:intron | 30.0% | |
| CTTATAGACATGCAATAAGA+TGG | - | chr3_2:43826127-43826146 | Msa0406880:intron | 30.0% | |
| TATAGACATGCAATAAGATG+GGG | - | chr3_2:43826129-43826148 | Msa0406880:intron | 30.0% | |
| !!! | CTTCTTTGTTTTTTTGTCCT+AGG | + | chr3_2:43826221-43826240 | None:intergenic | 30.0% |
| !! | ATAACACTTTGAGACTGTTT+GGG | + | chr3_2:43826271-43826290 | None:intergenic | 30.0% |
| GATTTACCTGATGTTAAACA+CGG | - | chr3_2:43826572-43826591 | Msa0406880:intron | 30.0% | |
| ! | ATTTTTCCGTGTTTAACATC+AGG | + | chr3_2:43826581-43826600 | None:intergenic | 30.0% |
| TGATGTTAAACACGGAAAAA+TGG | - | chr3_2:43826580-43826599 | Msa0406880:intron | 30.0% | |
| TGATAAAGAAAACCGCAATT+TGG | - | chr3_2:43826771-43826790 | Msa0406880:intron | 30.0% | |
| !! | ATTTTTAGAGGACCAAATTG+CGG | + | chr3_2:43826786-43826805 | None:intergenic | 30.0% |
| ! | TTGGTGATAAATTCTCAACA+TGG | + | chr3_2:43826882-43826901 | None:intergenic | 30.0% |
| TCACCAAATTAGAATTAGAG+TGG | - | chr3_2:43826895-43826914 | Msa0406880:intron | 30.0% | |
| TCACCACTCTAATTCTAATT+TGG | + | chr3_2:43826901-43826920 | None:intergenic | 30.0% | |
| ! | GTGATACTTTTGTATCTTGA+AGG | - | chr3_2:43826942-43826961 | Msa0406880:intron | 30.0% |
| ATGTGGCTTTCAAATGATTA+GGG | + | chr3_2:43827009-43827028 | None:intergenic | 30.0% | |
| AATGTGGCTTTCAAATGATT+AGG | + | chr3_2:43827010-43827029 | None:intergenic | 30.0% | |
| ATCATTTGAAAGCCACATTT+AGG | - | chr3_2:43827011-43827030 | Msa0406880:intron | 30.0% | |
| CATGGAATAAATCCTAAATG+TGG | + | chr3_2:43827026-43827045 | None:intergenic | 30.0% | |
| ATAAGGAATGAAATACTTCC+TGG | - | chr3_2:43827089-43827108 | Msa0406880:intron | 30.0% | |
| CAGATATTTAGGGACAAATA+TGG | + | chr3_2:43827186-43827205 | None:intergenic | 30.0% | |
| CATATTTGTCCCTAAATATC+TGG | - | chr3_2:43827184-43827203 | Msa0406880:CDS | 30.0% | |
| TGACAATTAAGCAAGAAAAG+CGG | + | chr3_2:43827216-43827235 | None:intergenic | 30.0% | |
| ! | CTTTTCTTGCTTAATTGTCA+GGG | - | chr3_2:43827216-43827235 | Msa0406880:CDS | 30.0% |
| !!! | GGAAATGGTTATGTTTTTTG+TGG | - | chr3_2:43827377-43827396 | Msa0406880:intron | 30.0% |
| CATATGAAATCACCATATTC+TGG | + | chr3_2:43827523-43827542 | None:intergenic | 30.0% | |
| GTTATTCAAATTGATAGAGC+AGG | - | chr3_2:43827595-43827614 | Msa0406880:intron | 30.0% | |
| ATGATCAATACTCAGTAGAA+TGG | + | chr3_2:43827645-43827664 | None:intergenic | 30.0% | |
| ATTCTATGTACATATGGTCA+TGG | - | chr3_2:43827663-43827682 | Msa0406880:intron | 30.0% | |
| TTCTATGTACATATGGTCAT+GGG | - | chr3_2:43827664-43827683 | Msa0406880:intron | 30.0% | |
| TCTACTAATAGATGTTTGTG+TGG | - | chr3_2:43827717-43827736 | Msa0406880:intron | 30.0% | |
| AAAATAAGGGAAAGAATCGT+AGG | + | chr3_2:43827798-43827817 | None:intergenic | 30.0% | |
| AACTCACACTTAATCAGTTA+AGG | + | chr3_2:43827867-43827886 | None:intergenic | 30.0% | |
| ! | TAAAAATGTGTTGACAGCAT+AGG | + | chr3_2:43828105-43828124 | None:intergenic | 30.0% |
| CAGTAATAAGTGATAACAGT+GGG | + | chr3_2:43828169-43828188 | None:intergenic | 30.0% | |
| TCAGTAATAAGTGATAACAG+TGG | + | chr3_2:43828170-43828189 | None:intergenic | 30.0% | |
| ! | TTTGTTACCTACATTTTGTC+AGG | - | chr3_2:43828319-43828338 | Msa0406880:intron | 30.0% |
| !! | TTTCTTTGAAATCCAACTCT+TGG | - | chr3_2:43828726-43828745 | Msa0406880:intron | 30.0% |
| !! | TTCTTTGAAATCCAACTCTT+GGG | - | chr3_2:43828727-43828746 | Msa0406880:intron | 30.0% |
| ATGTTTACTCTCTTTCTGTT+AGG | + | chr3_2:43828755-43828774 | None:intergenic | 30.0% | |
| AGAGAGTAAACATAAAAAGG+AGG | - | chr3_2:43828762-43828781 | Msa0406880:intron | 30.0% | |
| TGGAACTGATGATTATGATA+AGG | - | chr3_2:43828837-43828856 | Msa0406880:intron | 30.0% | |
| ! | TCTTTTCACAAGTTCAAGAA+TGG | + | chr3_2:43828898-43828917 | None:intergenic | 30.0% |
| ATAGTACCATGAAAAGTAGA+TGG | - | chr3_2:43829164-43829183 | Msa0406880:intron | 30.0% | |
| TAGTACCATGAAAAGTAGAT+GGG | - | chr3_2:43829165-43829184 | Msa0406880:intron | 30.0% | |
| ATGTTATGTTTACCATTCTG+AGG | - | chr3_2:43829204-43829223 | Msa0406880:intron | 30.0% | |
| ! | AGAGGAATTGTCTTTTATGA+TGG | + | chr3_2:43829275-43829294 | None:intergenic | 30.0% |
| AAAAGACAATTCCTCTACAT+AGG | - | chr3_2:43829279-43829298 | Msa0406880:intron | 30.0% | |
| AGTTGAGTATATACGAAACT+TGG | - | chr3_2:43829358-43829377 | Msa0406880:intron | 30.0% | |
| ! | ATGATTTCTTTTCCTTCACA+CGG | + | chr3_2:43829420-43829439 | None:intergenic | 30.0% |
| CTTACATTGAATGCTGAAAT+AGG | + | chr3_2:43829506-43829525 | None:intergenic | 30.0% | |
| CACACTCAAAACAAAAAAGA+GGG | + | chr3_2:43829623-43829642 | None:intergenic | 30.0% | |
| ! | ACGCTTTCAATCAAAAGTGT+CGG | + | chr3_2:43825500-43825519 | None:intergenic | 35.0% |
| TATTTGTGATAGAGAGAAGG+TGG | - | chr3_2:43825733-43825752 | Msa0406880:intron | 35.0% | |
| !! | CATAACACTTTGAGACTGTT+TGG | + | chr3_2:43826272-43826291 | None:intergenic | 35.0% |
| GAATTATAGTACGGATGGAT+GGG | + | chr3_2:43826338-43826357 | None:intergenic | 35.0% | |
| GTAAGGAATTATAGTACGGA+TGG | + | chr3_2:43826343-43826362 | None:intergenic | 35.0% | |
| TGCAGAGAACAGAAAATGTA+AGG | + | chr3_2:43826360-43826379 | None:intergenic | 35.0% | |
| CTTTATCAATCTGATGCTAC+AGG | - | chr3_2:43826544-43826563 | Msa0406880:intron | 35.0% | |
| TATGAGACAGTTGCTTGAAT+GGG | - | chr3_2:43826610-43826629 | Msa0406880:intron | 35.0% | |
| ! | TCCTTATTTCTTGAAGGAGA+AGG | - | chr3_2:43826664-43826683 | Msa0406880:intron | 35.0% |
| TCCTTCTCCTTCAAGAAATA+AGG | + | chr3_2:43826668-43826687 | None:intergenic | 35.0% | |
| AAGGAGAAGGAAGAATTGAA+GGG | - | chr3_2:43826677-43826696 | Msa0406880:intron | 35.0% | |
| ! | GTGTGATGACAAGTTTTTGT+GGG | + | chr3_2:43826834-43826853 | None:intergenic | 35.0% |
| ! | AGTGTGATGACAAGTTTTTG+TGG | + | chr3_2:43826835-43826854 | None:intergenic | 35.0% |
| GACAATTAAGCAAGAAAAGC+GGG | + | chr3_2:43827215-43827234 | None:intergenic | 35.0% | |
| ! | GCTTTTCTTGCTTAATTGTC+AGG | - | chr3_2:43827215-43827234 | Msa0406880:CDS | 35.0% |
| CAGAGAATCACGAGTAAAAA+TGG | + | chr3_2:43827285-43827304 | None:intergenic | 35.0% | |
| ! | AGTTTTCGACGAATGTGTTA+AGG | - | chr3_2:43827316-43827335 | Msa0406880:intron | 35.0% |
| TTGGTTCCAGGTATGAATAA+TGG | - | chr3_2:43827341-43827360 | Msa0406880:intron | 35.0% | |
| CCTATTCCATTATTCATACC+TGG | + | chr3_2:43827350-43827369 | None:intergenic | 35.0% | |
| ! | CCAGGTATGAATAATGGAAT+AGG | - | chr3_2:43827347-43827366 | Msa0406880:intron | 35.0% |
| ! | CTTTATGCATTTGAGGTTTC+TGG | - | chr3_2:43827418-43827437 | Msa0406880:intron | 35.0% |
| ! | TGATAGAGCAGGATCTATTT+TGG | - | chr3_2:43827606-43827625 | Msa0406880:intron | 35.0% |
| TCAATACTCAGTAGAATGGA+AGG | + | chr3_2:43827641-43827660 | None:intergenic | 35.0% | |
| AAAACTTGCATTGCTAGAGA+AGG | - | chr3_2:43827750-43827769 | Msa0406880:CDS | 35.0% | |
| TGTGTTACGAGATATGGATA+TGG | - | chr3_2:43827899-43827918 | Msa0406880:intron | 35.0% | |
| !! | GAATTCTTTGAAATCCTGTG+CGG | - | chr3_2:43827937-43827956 | Msa0406880:CDS | 35.0% |
| !! | AATTCTTTGAAATCCTGTGC+GGG | - | chr3_2:43827938-43827957 | Msa0406880:CDS | 35.0% |
| TAATCTGACCAACACATGTA+TGG | - | chr3_2:43827982-43828001 | Msa0406880:CDS | 35.0% | |
| GTAATACACCATACATGTGT+TGG | + | chr3_2:43827993-43828012 | None:intergenic | 35.0% | |
| ! | GTTGTCGAAGTGTTAAACTA+AGG | + | chr3_2:43828028-43828047 | None:intergenic | 35.0% |
| AAGACAGTAATAAACGGAAC+AGG | + | chr3_2:43828146-43828165 | None:intergenic | 35.0% | |
| AGTGGGAAGACAGTAATAAA+CGG | + | chr3_2:43828152-43828171 | None:intergenic | 35.0% | |
| ! | CGAAATGGTAATGATCCTAA+TGG | + | chr3_2:43828259-43828278 | None:intergenic | 35.0% |
| ! | GTTTACTGTTCTAGACGAAA+TGG | + | chr3_2:43828274-43828293 | None:intergenic | 35.0% |
| ! | GTCTAGAACAGTAAACTTCA+CGG | - | chr3_2:43828278-43828297 | Msa0406880:intron | 35.0% |
| GATTTCACCTGACAAAATGT+AGG | + | chr3_2:43828329-43828348 | None:intergenic | 35.0% | |
| ATTCGAACACTTTCCTCTAA+AGG | + | chr3_2:43828372-43828391 | None:intergenic | 35.0% | |
| ! | CTGTTATTGGCTAGTTGTTA+TGG | - | chr3_2:43828535-43828554 | Msa0406880:intron | 35.0% |
| !! | TACAAAGAGAAAGGGGTATT+GGG | + | chr3_2:43828568-43828587 | None:intergenic | 35.0% |
| ! | TTACAAAGAGAAAGGGGTAT+TGG | + | chr3_2:43828569-43828588 | None:intergenic | 35.0% |
| CTTCTGTTACAAAGAGAAAG+GGG | + | chr3_2:43828575-43828594 | None:intergenic | 35.0% | |
| CCTTCTGTTACAAAGAGAAA+GGG | + | chr3_2:43828576-43828595 | None:intergenic | 35.0% | |
| ACCTTCTGTTACAAAGAGAA+AGG | + | chr3_2:43828577-43828596 | None:intergenic | 35.0% | |
| ! | TGCCAAAGATCCTTTTCTAA+GGG | + | chr3_2:43828619-43828638 | None:intergenic | 35.0% |
| ! | ATGCCAAAGATCCTTTTCTA+AGG | + | chr3_2:43828620-43828639 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTATAACCAGCGT+AGG | - | chr3_2:43828654-43828673 | Msa0406880:CDS | 35.0% |
| TGAAGAAAGTGAAGATGAAG+AGG | - | chr3_2:43828792-43828811 | Msa0406880:intron | 35.0% | |
| ACTCAAAGTAGAGGATAAAG+TGG | + | chr3_2:43828865-43828884 | None:intergenic | 35.0% | |
| TGAAGAAGGAAAACCACATT+TGG | - | chr3_2:43828996-43829015 | Msa0406880:intron | 35.0% | |
| ATCTCAAAACAGACCAAATG+TGG | + | chr3_2:43829012-43829031 | None:intergenic | 35.0% | |
| AGTACCATGAAAAGTAGATG+GGG | - | chr3_2:43829166-43829185 | Msa0406880:intron | 35.0% | |
| ! | CATAACATTTGGGAAGTGTA+AGG | + | chr3_2:43829192-43829211 | None:intergenic | 35.0% |
| ! | TGATTTCTTTTCCTTCACAC+GGG | + | chr3_2:43829419-43829438 | None:intergenic | 35.0% |
| TGTTAATACTTATGCACCAC+AGG | - | chr3_2:43829455-43829474 | Msa0406880:intron | 35.0% | |
| !!! | AGGTTTTTTACATGAGTCGA+AGG | + | chr3_2:43829486-43829505 | None:intergenic | 35.0% |
| AATGTATAGGGAGTAATGTG+CGG | - | chr3_2:43829550-43829569 | Msa0406880:intron | 35.0% | |
| CCACACTCAAAACAAAAAAG+AGG | + | chr3_2:43829624-43829643 | None:intergenic | 35.0% | |
| !!! | CCTCTTTTTTGTTTTGAGTG+TGG | - | chr3_2:43829621-43829640 | Msa0406880:intron | 35.0% |
| !!! | CTTTTTTGTTTTGAGTGTGG+TGG | - | chr3_2:43829624-43829643 | Msa0406880:intron | 35.0% |
| CTATCAACTTCGTAATTCTC+TGG | - | chr3_2:43829833-43829852 | Msa0406880:CDS | 35.0% | |
| GTAAAGAATCACTACAGTTC+AGG | + | chr3_2:43829894-43829913 | None:intergenic | 35.0% | |
| !! | TAGCATGGACTATTGATTCT+AGG | - | chr3_2:43829937-43829956 | Msa0406880:intron | 35.0% |
| TCAAGCAGCAAGTTTAACAA+AGG | + | chr3_2:43830014-43830033 | None:intergenic | 35.0% | |
| GTCATCAACTACAATTCTTC+TGG | + | chr3_2:43830037-43830056 | None:intergenic | 35.0% | |
| !! | GAAGAATTGTAGTTGATGAC+AGG | - | chr3_2:43830037-43830056 | Msa0406880:intron | 35.0% |
| TCTGTTATCATCACACTTGC+AGG | + | chr3_2:43825311-43825330 | None:intergenic | 40.0% | |
| TTGAACCTAAACACATGTGC+AGG | + | chr3_2:43825538-43825557 | None:intergenic | 40.0% | |
| GTTAGTCCAAGCAAACACTA+TGG | - | chr3_2:43825964-43825983 | Msa0406880:intron | 40.0% | |
| ACATGACCATAGTGTTTGCT+TGG | + | chr3_2:43825973-43825992 | None:intergenic | 40.0% | |
| ! | ATGCAATAAGATGGGGTGTT+GGG | - | chr3_2:43826136-43826155 | Msa0406880:intron | 40.0% |
| GATAAGGGATAAGGAGTTAG+AGG | - | chr3_2:43826176-43826195 | Msa0406880:intron | 40.0% | |
| GGAATTATAGTACGGATGGA+TGG | + | chr3_2:43826339-43826358 | None:intergenic | 40.0% | |
| CAACCATGTCTCTGGTTAAA+TGG | - | chr3_2:43826378-43826397 | Msa0406880:intron | 40.0% | |
| TGACCATTTAACCAGAGACA+TGG | + | chr3_2:43826384-43826403 | None:intergenic | 40.0% | |
| TTCATAAGCTTGCAAGCAAG+AGG | - | chr3_2:43826434-43826453 | Msa0406880:CDS | 40.0% | |
| TCATAAGCTTGCAAGCAAGA+GGG | - | chr3_2:43826435-43826454 | Msa0406880:CDS | 40.0% | |
| CTATGAGACAGTTGCTTGAA+TGG | - | chr3_2:43826609-43826628 | Msa0406880:intron | 40.0% | |
| ATGAGACAGTTGCTTGAATG+GGG | - | chr3_2:43826611-43826630 | Msa0406880:intron | 40.0% | |
| ! | AGTGGCTCCTTATTTCTTGA+AGG | - | chr3_2:43826658-43826677 | Msa0406880:intron | 40.0% |
| GAAGGAGAAGGAAGAATTGA+AGG | - | chr3_2:43826676-43826695 | Msa0406880:intron | 40.0% | |
| GAAGGAAGAATTGAAGGGTA+TGG | - | chr3_2:43826682-43826701 | Msa0406880:intron | 40.0% | |
| TAGAGTGGTGACAATGACTT+TGG | - | chr3_2:43826910-43826929 | Msa0406880:intron | 40.0% | |
| !! | GTATCTTGAAGGCATCGATT+TGG | - | chr3_2:43826953-43826972 | Msa0406880:intron | 40.0% |
| !! | CATCGATTTGGTGATGTCTT+TGG | - | chr3_2:43826965-43826984 | Msa0406880:intron | 40.0% |
| ATGGCTTGACGATACTCATA+AGG | - | chr3_2:43827072-43827091 | Msa0406880:intron | 40.0% | |
| TGTACATGTGCTCATATTCC+AGG | + | chr3_2:43827110-43827129 | None:intergenic | 40.0% | |
| AATTAAGCAAGAAAAGCGGG+AGG | + | chr3_2:43827212-43827231 | None:intergenic | 40.0% | |
| TCGTCGAAAACTAAAACCTG+TGG | + | chr3_2:43827308-43827327 | None:intergenic | 40.0% | |
| GGAATAGGATTTACGGGAAA+TGG | - | chr3_2:43827362-43827381 | Msa0406880:intron | 40.0% | |
| !!! | GGTTCCATTGACGTTTTTTC+CGG | + | chr3_2:43827501-43827520 | None:intergenic | 40.0% |
| CAGAGATCCAACTCATAACA+TGG | + | chr3_2:43827697-43827716 | None:intergenic | 40.0% | |
| CTAATAGATGTTTGTGTGGC+AGG | - | chr3_2:43827721-43827740 | Msa0406880:intron | 40.0% | |
| ! | AAATGTGTTGACAGCATAGG+TGG | + | chr3_2:43828102-43828121 | None:intergenic | 40.0% |
| GGTAGAAGAATCGTCAACAT+AGG | + | chr3_2:43828351-43828370 | None:intergenic | 40.0% | |
| GACGATTCTTCTACCTTTAG+AGG | - | chr3_2:43828356-43828375 | Msa0406880:intron | 40.0% | |
| CCCTTTCTCTTTGTAACAGA+AGG | - | chr3_2:43828573-43828592 | Msa0406880:intron | 40.0% | |
| TAACCTTCCTCCCTTAGAAA+AGG | - | chr3_2:43828606-43828625 | Msa0406880:CDS | 40.0% | |
| !! | CAAAGATCCTTTTCTAAGGG+AGG | + | chr3_2:43828616-43828635 | None:intergenic | 40.0% |
| CTCCCTTAGAAAAGGATCTT+TGG | - | chr3_2:43828614-43828633 | Msa0406880:CDS | 40.0% | |
| TGAAGCTACAAACCTCAGAA+TGG | + | chr3_2:43829219-43829238 | None:intergenic | 40.0% | |
| GGCAACTGTATGCTACATAT+TGG | + | chr3_2:43829662-43829681 | None:intergenic | 40.0% | |
| ! | AATGTTGAAGATTCTGGGGA+TGG | - | chr3_2:43829768-43829787 | Msa0406880:intron | 40.0% |
| GTGATTCTTTACTCATCCTG+TGG | - | chr3_2:43829902-43829921 | Msa0406880:exon | 40.0% | |
| GTCCGAGAGATACCTGTAAA+CGG | + | chr3_2:43825232-43825251 | None:intergenic | 45.0% | |
| TCATCACACTTGCAGGTTCT+AGG | + | chr3_2:43825304-43825323 | None:intergenic | 45.0% | |
| GCTTAGACTTCGTAAATGGC+TGG | - | chr3_2:43825343-43825362 | Msa0406880:three_prime_UTR | 45.0% | |
| GAGTGTAGAGATGTTACCTG+TGG | + | chr3_2:43825442-43825461 | None:intergenic | 45.0% | |
| CATTGCCTGCACATGTGTTT+AGG | - | chr3_2:43825530-43825549 | Msa0406880:intron | 45.0% | |
| CTATGTGGCAGTGTTATGTC+TGG | - | chr3_2:43825589-43825608 | Msa0406880:intron | 45.0% | |
| GCAAACACTATGGTCATGTC+TGG | - | chr3_2:43825974-43825993 | Msa0406880:intron | 45.0% | |
| CATGCAATAAGATGGGGTGT+TGG | - | chr3_2:43826135-43826154 | Msa0406880:intron | 45.0% | |
| TATCCCTTATCTCGTACCAG+CGG | + | chr3_2:43826167-43826186 | None:intergenic | 45.0% | |
| CTGGTACGAGATAAGGGATA+AGG | - | chr3_2:43826167-43826186 | Msa0406880:intron | 45.0% | |
| GATAAGGAGTTAGAGGTCCT+GGG | - | chr3_2:43826183-43826202 | Msa0406880:intron | 45.0% | |
| ! | CTAGGTTTGAGTTTGAACCC+AGG | + | chr3_2:43826203-43826222 | None:intergenic | 45.0% |
| CTGGGTTCAAACTCAAACCT+AGG | - | chr3_2:43826201-43826220 | Msa0406880:intron | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+TGG | + | chr3_2:43826260-43826279 | None:intergenic | 45.0% | |
| ! | GGATGGGTAGAAGGTTTGTT+TGG | + | chr3_2:43826322-43826341 | None:intergenic | 45.0% |
| CTTAATTGTCAGGGCGCAAA+AGG | - | chr3_2:43827225-43827244 | Msa0406880:CDS | 45.0% | |
| CGACGAATGTGTTAAGGAGT+TGG | - | chr3_2:43827322-43827341 | Msa0406880:intron | 45.0% | |
| ! | TGTGTTAAGGAGTTGGTTCC+AGG | - | chr3_2:43827329-43827348 | Msa0406880:intron | 45.0% |
| AAACTAAGCAGATGCTGAGC+CGG | - | chr3_2:43827479-43827498 | Msa0406880:intron | 45.0% | |
| TGAGCCGGAAAAAACGTCAA+TGG | - | chr3_2:43827494-43827513 | Msa0406880:CDS | 45.0% | |
| CGTCAATGGAACCCAGAATA+TGG | - | chr3_2:43827508-43827527 | Msa0406880:CDS | 45.0% | |
| GAAGAGGTGGATGACAACAT+AGG | + | chr3_2:43828050-43828069 | None:intergenic | 45.0% | |
| ATCCACCTCTTCTGTCTTCA+CGG | - | chr3_2:43828058-43828077 | Msa0406880:intron | 45.0% | |
| ! | ATAGGTGGTGCCAATGCTAA+TGG | + | chr3_2:43828087-43828106 | None:intergenic | 45.0% |
| !! | AGAGAAAGGGGTATTGGGTA+AGG | + | chr3_2:43828563-43828582 | None:intergenic | 45.0% |
| !! | GATCCTTTTCTAAGGGAGGA+AGG | + | chr3_2:43828612-43828631 | None:intergenic | 45.0% |
| TCTGTTAGGAACCCAAGAGT+TGG | + | chr3_2:43828741-43828760 | None:intergenic | 45.0% | |
| AATGAAGAGAGTAGCGAGTC+TGG | - | chr3_2:43828817-43828836 | Msa0406880:intron | 45.0% | |
| GGTCTATAGTCAATCCGTAG+AGG | + | chr3_2:43829087-43829106 | None:intergenic | 45.0% | |
| !! | AAGGCCCCATCTACTTTTCA+TGG | + | chr3_2:43829173-43829192 | None:intergenic | 45.0% |
| GGACTGAGTAACCTATGTAG+AGG | + | chr3_2:43829293-43829312 | None:intergenic | 45.0% | |
| TGGCTGCTTCTATACTAGCA+TGG | - | chr3_2:43829922-43829941 | Msa0406880:intron | 45.0% | |
| !!! | TATATTTTTTTACAATATAT+TGG | + | chr3_2:43829108-43829127 | None:intergenic | 5.0% |
| GAGATACCTGTAAACGGCGA+CGG | + | chr3_2:43825226-43825245 | None:intergenic | 50.0% | |
| CGCCGTTTACAGGTATCTCT+CGG | - | chr3_2:43825227-43825246 | Msa0406880:three_prime_UTR | 50.0% | |
| ACTTCGTAAATGGCTGGCAG+AGG | - | chr3_2:43825349-43825368 | Msa0406880:three_prime_UTR | 50.0% | |
| GGATAAGGAGTTAGAGGTCC+TGG | - | chr3_2:43826182-43826201 | Msa0406880:intron | 50.0% | |
| AGTACGGATGGATGGGTAGA+AGG | + | chr3_2:43826331-43826350 | None:intergenic | 50.0% | |
| GTTCTCTGCAACCATGTCTC+TGG | - | chr3_2:43826370-43826389 | Msa0406880:intron | 50.0% | |
| CGGGAGGAGCCAGATATTTA+GGG | + | chr3_2:43827196-43827215 | None:intergenic | 50.0% | |
| TACTCGTGATTCTCTGCCAC+AGG | - | chr3_2:43827289-43827308 | Msa0406880:intron | 50.0% | |
| ATTGCTAGAGAAGGAGCTCC+TGG | - | chr3_2:43827759-43827778 | Msa0406880:CDS | 50.0% | |
| TTGAAATCCTGTGCGGGACT+TGG | - | chr3_2:43827944-43827963 | Msa0406880:CDS | 50.0% | |
| TGAAATCCTGTGCGGGACTT+GGG | - | chr3_2:43827945-43827964 | Msa0406880:CDS | 50.0% | |
| TTCACGGTGGCCATTAGCAT+TGG | - | chr3_2:43828074-43828093 | Msa0406880:intron | 50.0% | |
| TGTCAATTGTAGCGCTGTGC+TGG | + | chr3_2:43828229-43828248 | None:intergenic | 50.0% | |
| CATACTGTTTGCCCGTGTGA+AGG | - | chr3_2:43829405-43829424 | Msa0406880:intron | 50.0% | |
| TGAGTCGAAGGACAAACCTG+TGG | + | chr3_2:43829474-43829493 | None:intergenic | 50.0% | |
| GCTAGTATAGAAGCAGCCAC+AGG | + | chr3_2:43829921-43829940 | None:intergenic | 50.0% | |
| TTGGAACCGTCGCCGTTTAC+AGG | - | chr3_2:43825217-43825236 | Msa0406880:three_prime_UTR | 55.0% | |
| TCGTAAATGGCTGGCAGAGG+AGG | - | chr3_2:43825352-43825371 | Msa0406880:three_prime_UTR | 55.0% | |
| AAATGGCTGGCAGAGGAGGA+TGG | - | chr3_2:43825356-43825375 | Msa0406880:exon | 55.0% | |
| AATGGCTGGCAGAGGAGGAT+GGG | - | chr3_2:43825357-43825376 | Msa0406880:exon | 55.0% | |
| AGCTCCGCTGGTACGAGATA+AGG | - | chr3_2:43826160-43826179 | Msa0406880:intron | 55.0% | |
| GCTCCGCTGGTACGAGATAA+GGG | - | chr3_2:43826161-43826180 | Msa0406880:intron | 55.0% | |
| GCGGGAGGAGCCAGATATTT+AGG | + | chr3_2:43827197-43827216 | None:intergenic | 55.0% | |
| GTAGGCATACGTGCTCTTCC+AGG | + | chr3_2:43827780-43827799 | None:intergenic | 55.0% | |
| CACCGTGAAGACAGAAGAGG+TGG | + | chr3_2:43828063-43828082 | None:intergenic | 55.0% | |
| CACCTCTTCTGTCTTCACGG+TGG | - | chr3_2:43828061-43828080 | Msa0406880:intron | 55.0% | |
| CAATTGTAGCGCTGTGCTGG+TGG | + | chr3_2:43828226-43828245 | None:intergenic | 55.0% | |
| AGCAACAGCTTCTCCTACGC+TGG | + | chr3_2:43828670-43828689 | None:intergenic | 55.0% | |
| GGGAGTAATGTGCGGCATCA+AGG | - | chr3_2:43829558-43829577 | Msa0406880:intron | 55.0% | |
| ATGGCTGGCAGAGGAGGATG+GGG | - | chr3_2:43825358-43825377 | Msa0406880:exon | 60.0% | |
| TCCTGTGCGGGACTTGGGAT+TGG | - | chr3_2:43827950-43827969 | Msa0406880:CDS | 60.0% | |
| TCCAATCCCAAGTCCCGCAC+AGG | + | chr3_2:43827954-43827973 | None:intergenic | 60.0% | |
| GGCCACCGTGAAGACAGAAG+AGG | + | chr3_2:43828066-43828085 | None:intergenic | 60.0% | |
| CTGGCAGAGGAGGATGGGGA+CGG | - | chr3_2:43825362-43825381 | Msa0406880:exon | 65.0% | |
| TGGCAGAGGAGGATGGGGAC+GGG | - | chr3_2:43825363-43825382 | Msa0406880:exon | 65.0% | |
| ! | TGTGCTGGTGGCAGTGGCAG+CGG | + | chr3_2:43828214-43828233 | None:intergenic | 65.0% |
| ! | TAGCGCTGTGCTGGTGGCAG+TGG | + | chr3_2:43828220-43828239 | None:intergenic | 65.0% |
| GGCAGAGGAGGATGGGGACG+GGG | - | chr3_2:43825364-43825383 | Msa0406880:exon | 70.0% | |
| GATGGGGACGGGGACGAGGA+CGG | - | chr3_2:43825374-43825393 | Msa0406880:intron | 70.0% | |
| ATGGGGACGGGGACGAGGAC+GGG | - | chr3_2:43825375-43825394 | Msa0406880:intron | 70.0% | |
| !! | GGGGTGTTGGGTAGCTCCGC+TGG | - | chr3_2:43826148-43826167 | Msa0406880:intron | 70.0% |
| GGAGGATGGGGACGGGGACG+AGG | - | chr3_2:43825370-43825389 | Msa0406880:exon | 75.0% | |
| TGGGGACGGGGACGAGGACG+GGG | - | chr3_2:43825376-43825395 | Msa0406880:intron | 75.0% | |
| CGGGGACGAGGACGGGGAAG+AGG | - | chr3_2:43825382-43825401 | Msa0406880:intron | 75.0% | |
| GCTGGTGGCAGTGGCAGCGG+TGG | + | chr3_2:43828211-43828230 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 43825201 | 43830076 | 43825201 | ID=Msa0406880;Name=Msa0406880 |
| chr3_2 | mRNA | 43825201 | 43830076 | 43825201 | ID=Msa0406880-mRNA-1;Parent=Msa0406880;Name=Msa0406880-mRNA-1;_AED=0.06;_eAED=0.06;_QI=47|0.77|0.9|0.9|0.88|0.8|10|174|229 |
| chr3_2 | exon | 43825201 | 43825391 | 43825201 | ID=Msa0406880-mRNA-1:exon:8492;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43825488 | 43825536 | 43825488 | ID=Msa0406880-mRNA-1:exon:8491;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43826419 | 43826517 | 43826419 | ID=Msa0406880-mRNA-1:exon:8490;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43827168 | 43827257 | 43827168 | ID=Msa0406880-mRNA-1:exon:8489;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43827488 | 43827534 | 43827488 | ID=Msa0406880-mRNA-1:exon:8488;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43827748 | 43827801 | 43827748 | ID=Msa0406880-mRNA-1:exon:8487;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43827927 | 43828040 | 43827927 | ID=Msa0406880-mRNA-1:exon:8486;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43828579 | 43828711 | 43828579 | ID=Msa0406880-mRNA-1:exon:8485;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43829833 | 43829928 | 43829833 | ID=Msa0406880-mRNA-1:exon:8484;Parent=Msa0406880-mRNA-1 |
| chr3_2 | exon | 43830039 | 43830076 | 43830039 | ID=Msa0406880-mRNA-1:exon:8483;Parent=Msa0406880-mRNA-1 |
| chr3_2 | five_prime_UTR | 43830039 | 43830076 | 43830039 | ID=Msa0406880-mRNA-1:five_prime_utr;Parent=Msa0406880-mRNA-1 |
| chr3_2 | five_prime_UTR | 43829920 | 43829928 | 43829920 | ID=Msa0406880-mRNA-1:five_prime_utr;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43829833 | 43829919 | 43829833 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43828579 | 43828711 | 43828579 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43827927 | 43828040 | 43827927 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43827748 | 43827801 | 43827748 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43827488 | 43827534 | 43827488 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43827168 | 43827257 | 43827168 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43826419 | 43826517 | 43826419 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43825488 | 43825536 | 43825488 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | CDS | 43825375 | 43825391 | 43825375 | ID=Msa0406880-mRNA-1:cds;Parent=Msa0406880-mRNA-1 |
| chr3_2 | three_prime_UTR | 43825201 | 43825374 | 43825201 | ID=Msa0406880-mRNA-1:three_prime_utr;Parent=Msa0406880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
