AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0351100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0351100 MtrunA17_Chr3g0085891 91.228 114 10 0 17 130 15 128 6.25e-73 221
Msa0351100 MtrunA17_Chr1g0160891 70.492 122 31 3 17 137 17 134 1.24e-51 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 70 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTAAATGTTGAAGATTC+TGG 0.196464 3_1:-17024821 Msa0351100:CDS
TCCTTCTCCTTCAAGAAATA+AGG 0.229085 3_1:+17027922 None:intergenic
TTGTAGACTTCGTAAGTAAA+TGG 0.270190 3_1:-17029230 Msa0351100:intron
CGGGGACGGGGACGGGGAAG+AGG 0.279136 3_1:-17029187 Msa0351100:CDS
GAGAGAGAGTAAACATAAAA+AGG 0.285268 3_1:-17025825 Msa0351100:CDS
TAGCATGGACTATTGATTCT+AGG 0.300006 3_1:-17024646 Msa0351100:three_prime_UTR
TTGAAACCGTCGCCGTTTAC+AGG 0.301274 3_1:-17029354 Msa0351100:intron
TGTGTTAAGGAGTTGGTTCC+AGG 0.329012 3_1:-17027257 Msa0351100:intron
AGGAGGATGGGGACGGGGAC+GGG 0.334708 3_1:-17029200 Msa0351100:CDS
ATGGGGACGGGGACGGGGAC+GGG 0.342594 3_1:-17029194 Msa0351100:CDS
GGAGGATGGGGACGGGGACG+GGG 0.342875 3_1:-17029199 Msa0351100:CDS
TGGGGACGGGGACGGGGACG+GGG 0.356426 3_1:-17029193 Msa0351100:CDS
ATCATCAACTACAATTCTTC+TGG 0.366455 3_1:+17024549 None:intergenic
GTAGGCATACGTGCTCTTCC+AGG 0.366856 3_1:+17026809 None:intergenic
CTATGAGACAGTTGCTTGAA+TGG 0.378644 3_1:-17027978 Msa0351100:CDS
ATTTAAATGTTGAAGATTCT+GGG 0.382185 3_1:-17024820 Msa0351100:CDS
GGCAGAGGAGGATGGGGACG+GGG 0.384213 3_1:-17029205 Msa0351100:CDS
GAAGAATTGTAGTTGATGAT+AGG 0.395074 3_1:-17024546 Msa0351100:three_prime_UTR
TGGCAGAGGAGGATGGGGAC+GGG 0.402946 3_1:-17029206 Msa0351100:CDS
AATGAAGAGAGTAGCGAGTC+TGG 0.412583 3_1:-17025767 Msa0351100:CDS
AATTGACAAAACTATCCATT+AGG 0.412837 3_1:-17026343 Msa0351100:CDS
GCGTAGCGAAGCGAAGTTCT+TGG 0.417668 3_1:-17029381 None:intergenic
GAGGAGGATGGGGACGGGGA+CGG 0.418582 3_1:-17029201 Msa0351100:CDS
TATGAGACAGTTGCTTGAAT+GGG 0.420424 3_1:-17027977 Msa0351100:CDS
TGTGCTGGTGGCAGTGGCAG+CGG 0.423371 3_1:+17026373 None:intergenic
GTAAAGAATCACTACAGTTC+AGG 0.435840 3_1:+17024692 None:intergenic
CGACGAATGTGTTAAGGAGT+TGG 0.450423 3_1:-17027264 Msa0351100:CDS
CGTCAATGGAACCCAGCATA+TGG 0.451173 3_1:-17027078 Msa0351100:intron
TACTCGTGATTCTCTGCCAC+AGG 0.453424 3_1:-17027297 Msa0351100:CDS
GAAGGAGAAGGAAGAATTGA+AGG 0.454002 3_1:-17027911 Msa0351100:CDS
TGTCAATTGTAGCGCTGTGC+TGG 0.460569 3_1:+17026358 None:intergenic
TGAAGAAAGTGAAGATGAAG+AGG 0.461729 3_1:-17025792 Msa0351100:CDS
AATGGCTGGCAGAGGAGGAT+GGG 0.467693 3_1:-17029212 Msa0351100:CDS
AGTGGCTCCTTATTTCTTGA+AGG 0.473271 3_1:-17027929 Msa0351100:CDS
TAGCGCTGTGCTGGTGGCAG+TGG 0.474989 3_1:+17026367 None:intergenic
CTGGCAGAGGAGGATGGGGA+CGG 0.475505 3_1:-17029207 Msa0351100:CDS
CTTAATTGTCAGGGCGCAAA+AGG 0.477030 3_1:-17027361 Msa0351100:intron
CATATGAAATCACCATATGC+TGG 0.480714 3_1:+17027066 None:intergenic
AAATGGCTGGCAGAGGAGGA+TGG 0.482599 3_1:-17029213 Msa0351100:CDS
GATGGGGACGGGGACGGGGA+CGG 0.486855 3_1:-17029195 Msa0351100:CDS
GAAGACAGTAATAAACGAAC+AGG 0.498444 3_1:+17026440 None:intergenic
ATTGCTAGAGAAGGAGCTCC+TGG 0.499023 3_1:-17026827 Msa0351100:CDS
AATGTTGAAGATTCTGGGGA+TGG 0.506964 3_1:-17024815 Msa0351100:intron
CGAGACGGTAATGATCCTAA+TGG 0.513615 3_1:+17026328 None:intergenic
AAACTAAGCAGATGCTGAGC+CGG 0.515920 3_1:-17027107 Msa0351100:CDS
TGGAACTGATGATTATGATA+AGG 0.518462 3_1:-17025747 Msa0351100:intron
ATGGCTGGCAGAGGAGGATG+GGG 0.521277 3_1:-17029211 Msa0351100:CDS
TCCTTATTTCTTGAAGGAGA+AGG 0.526141 3_1:-17027923 Msa0351100:CDS
GTCCGAGAGATACCTGTAAA+CGG 0.535958 3_1:+17029342 None:intergenic
AAGTAAATGGCTGGCAGAGG+AGG 0.552160 3_1:-17029217 Msa0351100:exon
CGTAAGTAAATGGCTGGCAG+AGG 0.553107 3_1:-17029220 Msa0351100:exon
AGACTTCGTAAGTAAATGGC+TGG 0.562391 3_1:-17029226 Msa0351100:exon
GCTGGTGGCAGTGGCAGCGG+TGG 0.571233 3_1:+17026376 None:intergenic
TGGCTGCTTCTATACTAGCA+TGG 0.576173 3_1:-17024661 Msa0351100:three_prime_UTR
AAAACTTGCATTGCTAGAGA+AGG 0.581983 3_1:-17026836 Msa0351100:CDS
ATATGAAATCACCATATGCT+GGG 0.584873 3_1:+17027067 None:intergenic
AAGGAGAAGGAAGAATTGAA+GGG 0.585858 3_1:-17027910 Msa0351100:intron
GTGATTCTTTACTCATCCTG+TGG 0.597923 3_1:-17024681 Msa0351100:three_prime_UTR
AAACTACAAATGGAAGTGGT+CGG 0.599249 3_1:+17029155 None:intergenic
ATGAGACAGTTGCTTGAATG+GGG 0.600528 3_1:-17027976 Msa0351100:CDS
CAATTGTAGCGCTGTGCTGG+TGG 0.606702 3_1:+17026361 None:intergenic
GATTTACCTGATGTTAAACA+CGG 0.617922 3_1:-17028015 Msa0351100:CDS
CAGTATTAAGTGATAACAGT+GGG 0.621213 3_1:+17026418 None:intergenic
GCTAGTATAGAAGCAGCCAC+AGG 0.632363 3_1:+17024665 None:intergenic
TTTAAATGTTGAAGATTCTG+GGG 0.632918 3_1:-17024819 Msa0351100:CDS
TCAAGCAGCAAGTTTAACAA+AGG 0.635144 3_1:+17024572 None:intergenic
GTTTACTGTTCTAGACGAGA+CGG 0.646043 3_1:+17026313 None:intergenic
GAGATACCTGTAAACGGCGA+CGG 0.655045 3_1:+17029348 None:intergenic
TCAGTATTAAGTGATAACAG+TGG 0.693074 3_1:+17026417 None:intergenic
TCGTCGAAAACTAAAACCTG+TGG 0.697134 3_1:+17027281 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTCAAAATATTTC+TGG - chr3_1:17024893-17024912 Msa0351100:intron 10.0%
!!! TTCATTTTAATAAATAATGA+AGG - chr3_1:17025112-17025131 Msa0351100:intron 10.0%
!! AAAATGAAAAAAAAAAATCT+TGG + chr3_1:17028998-17029017 None:intergenic 10.0%
!! AAATGAAAACTAAAAAAACA+AGG + chr3_1:17024982-17025001 None:intergenic 15.0%
!!! TTTTGATAGATATTTTAAAG+TGG - chr3_1:17025952-17025971 Msa0351100:intron 15.0%
!! CTTTAAACAATAATATATCA+TGG + chr3_1:17026357-17026376 None:intergenic 15.0%
!!! CAAATAATTTAGAACTAAAT+TGG - chr3_1:17026757-17026776 Msa0351100:intron 15.0%
!! TTGTTAACGTTAAAAAATAA+GGG + chr3_1:17027124-17027143 None:intergenic 15.0%
!! TTTGTTAACGTTAAAAAATA+AGG + chr3_1:17027125-17027144 None:intergenic 15.0%
!!! TTTTTTAACGTTAACAAAAT+AGG - chr3_1:17027127-17027146 Msa0351100:intron 15.0%
!!! TTTTTAACGTTAACAAAATA+GGG - chr3_1:17027128-17027147 Msa0351100:intron 15.0%
!! AAAAGAAATCATATTAAACT+TGG - chr3_1:17028743-17028762 Msa0351100:intron 15.0%
!!! TTTTTCATTTTCGTATTAAA+AGG - chr3_1:17029007-17029026 Msa0351100:intron 15.0%
!! AACAATAAATTTACAGTCAA+AGG + chr3_1:17024585-17024604 None:intergenic 20.0%
!!! AGTTAAGTTGATTATTGAAA+CGG + chr3_1:17024794-17024813 None:intergenic 20.0%
!! TTGATTTATTTATGCTTATC+TGG + chr3_1:17025615-17025634 None:intergenic 20.0%
!! ACAGAAAATGAATTATAGTA+CGG + chr3_1:17025664-17025683 None:intergenic 20.0%
!! GAAATATAGAAATAGTTATG+AGG + chr3_1:17025729-17025748 None:intergenic 20.0%
!! ACAGAAAATAGATAATTACA+CGG + chr3_1:17025825-17025844 None:intergenic 20.0%
!! TCACAATATATATCATGTAA+AGG + chr3_1:17026029-17026048 None:intergenic 20.0%
!!! ATTGTTTAAAGTATCTAACA+TGG - chr3_1:17026366-17026385 Msa0351100:CDS 20.0%
!!! GAATATTTTCAATGCTTATA+TGG - chr3_1:17026471-17026490 Msa0351100:intron 20.0%
!!! CACATTTTTAATGTTATAAC+AGG - chr3_1:17027431-17027450 Msa0351100:intron 20.0%
!!! ATTTTTAATGTTATAACAGG+AGG - chr3_1:17027434-17027453 Msa0351100:intron 20.0%
!! TGTTCGAATTATAGAATAAA+GGG - chr3_1:17027698-17027717 Msa0351100:intron 20.0%
!! TTGTTAGTTAGATTTCTATT+TGG - chr3_1:17027805-17027824 Msa0351100:intron 20.0%
!! TGTTAGTTAGATTTCTATTT+GGG - chr3_1:17027806-17027825 Msa0351100:intron 20.0%
!!! TTCAATTTGAAAATTTTGTG+GGG + chr3_1:17028259-17028278 None:intergenic 20.0%
!!! CTTCAATTTGAAAATTTTGT+GGG + chr3_1:17028260-17028279 None:intergenic 20.0%
!!! ACTTCAATTTGAAAATTTTG+TGG + chr3_1:17028261-17028280 None:intergenic 20.0%
!!! GTTTTTTTAACATTTAGAGA+CGG + chr3_1:17028380-17028399 None:intergenic 20.0%
!! AAATGTTAAAAAAACCTCTA+CGG - chr3_1:17028385-17028404 Msa0351100:intron 20.0%
!! TATACAGTTTGTAATGATAT+TGG + chr3_1:17028629-17028648 None:intergenic 20.0%
!! ATGTAAGTTGTTTGTAAATT+TGG - chr3_1:17028834-17028853 Msa0351100:intron 20.0%
!!! TTTGGATTTTAGAAATGTAT+AGG - chr3_1:17028852-17028871 Msa0351100:intron 20.0%
!!! TTGGATTTTAGAAATGTATA+GGG - chr3_1:17028853-17028872 Msa0351100:intron 20.0%
!!! CTGCAAAATTTTAATTTAGT+TGG + chr3_1:17029037-17029056 None:intergenic 20.0%
!! ATTTAAATGTTGAAGATTCT+GGG - chr3_1:17029079-17029098 Msa0351100:intron 20.0%
!!! AAATATTTCTGGTATCTATG+TGG - chr3_1:17024904-17024923 Msa0351100:intron 25.0%
!! AAAACAAGGTCTTATAATCT+AGG + chr3_1:17024968-17024987 None:intergenic 25.0%
! GTTTCTTTCATAAACTATCA+TGG - chr3_1:17025395-17025414 Msa0351100:intron 25.0%
! TTATAGACATGCAATAAGAT+GGG - chr3_1:17025445-17025464 Msa0351100:intron 25.0%
! AAAATGAATTATAGTACGGA+TGG + chr3_1:17025660-17025679 None:intergenic 25.0%
! ACATGATATATATTGTGAGA+TGG - chr3_1:17026031-17026050 Msa0351100:intron 25.0%
!! GTCCTCTAAAAATTTGAATA+TGG - chr3_1:17026105-17026124 Msa0351100:intron 25.0%
!!! AGCCATATTCAAATTTTTAG+AGG + chr3_1:17026110-17026129 None:intergenic 25.0%
!!! GGTCAAATTTTAATCTTTGA+GGG + chr3_1:17026174-17026193 None:intergenic 25.0%
!!! TGGTCAAATTTTAATCTTTG+AGG + chr3_1:17026175-17026194 None:intergenic 25.0%
! ATGTAGCTTTCAAATGATTA+GGG + chr3_1:17026322-17026341 None:intergenic 25.0%
! AATGTAGCTTTCAAATGATT+AGG + chr3_1:17026323-17026342 None:intergenic 25.0%
! ATCATTTGAAAGCTACATTT+AGG - chr3_1:17026324-17026343 Msa0351100:CDS 25.0%
!! GAATAATGGAATAGGATTTA+CGG - chr3_1:17026668-17026687 Msa0351100:intron 25.0%
!! AATAATGGAATAGGATTTAC+GGG - chr3_1:17026669-17026688 Msa0351100:intron 25.0%
!! TACTTTTCTTTATGCATTTG+AGG - chr3_1:17026724-17026743 Msa0351100:intron 25.0%
!! AGAACTAAATTGGTAATTTC+AGG - chr3_1:17026767-17026786 Msa0351100:intron 25.0%
! TTGATCATTCTATGTACATA+TGG - chr3_1:17026970-17026989 Msa0351100:intron 25.0%
! ATATTATCCATGTTATGAGT+TGG - chr3_1:17027000-17027019 Msa0351100:intron 25.0%
! TTAAGGAATCAAAAAATGAC+TGG + chr3_1:17027166-17027185 None:intergenic 25.0%
! TAATATTGTGTTACGAGATA+TGG - chr3_1:17027209-17027228 Msa0351100:intron 25.0%
! AATTGACAAAACTATCCATT+AGG - chr3_1:17027556-17027575 Msa0351100:intron 25.0%
! GTGTTCGAATTATAGAATAA+AGG - chr3_1:17027697-17027716 Msa0351100:intron 25.0%
! GCATATATCTTAGTTGTAAT+TGG - chr3_1:17027951-17027970 Msa0351100:CDS 25.0%
! AAAATTAACACTCAAAGTAG+AGG + chr3_1:17028189-17028208 None:intergenic 25.0%
!!! CTGTTTTGAGATAAAATTAG+TGG - chr3_1:17028335-17028354 Msa0351100:intron 25.0%
! ATAGTAAGCTTCATCAATTA+TGG - chr3_1:17028440-17028459 Msa0351100:intron 25.0%
! GAATGGTAAACATAACATTT+GGG + chr3_1:17028517-17028536 None:intergenic 25.0%
! AGAATGGTAAACATAACATT+TGG + chr3_1:17028518-17028537 None:intergenic 25.0%
! AGTATGTGTAATATTTGTAG+GGG + chr3_1:17028706-17028725 None:intergenic 25.0%
! CAGTATGTGTAATATTTGTA+GGG + chr3_1:17028707-17028726 None:intergenic 25.0%
! ACAGTATGTGTAATATTTGT+AGG + chr3_1:17028708-17028727 None:intergenic 25.0%
! GATTTAAATGTTGAAGATTC+TGG - chr3_1:17029078-17029097 Msa0351100:intron 25.0%
! TTTAAATGTTGAAGATTCTG+GGG - chr3_1:17029080-17029099 Msa0351100:intron 25.0%
TTGTAGACTTCGTAAGTAAA+TGG - chr3_1:17024669-17024688 Msa0351100:three_prime_UTR 30.0%
! GATTTTAAATTCTGCTAACG+AGG - chr3_1:17025017-17025036 Msa0351100:intron 30.0%
GAATATTTGTGATAGAGAGA+AGG - chr3_1:17025060-17025079 Msa0351100:intron 30.0%
AAGAAGTTAATCCAAGCAAA+CGG - chr3_1:17025279-17025298 Msa0351100:intron 30.0%
GGGTAAACAACTTAATTAAG+TGG - chr3_1:17025314-17025333 Msa0351100:intron 30.0%
CTTATAGACATGCAATAAGA+TGG - chr3_1:17025444-17025463 Msa0351100:intron 30.0%
TATAGACATGCAATAAGATG+GGG - chr3_1:17025446-17025465 Msa0351100:intron 30.0%
!!! CTTCTTTGTTTTTTTGTCCT+AGG + chr3_1:17025538-17025557 None:intergenic 30.0%
!! ATAACACTTTGAGACTGTTT+GGG + chr3_1:17025588-17025607 None:intergenic 30.0%
GATTTACCTGATGTTAAACA+CGG - chr3_1:17025884-17025903 Msa0351100:intron 30.0%
! ATTTTTCCGTGTTTAACATC+AGG + chr3_1:17025893-17025912 None:intergenic 30.0%
TGATGTTAAACACGGAAAAA+TGG - chr3_1:17025892-17025911 Msa0351100:intron 30.0%
TGATAAAGAAAACCGCAATT+TGG - chr3_1:17026083-17026102 Msa0351100:intron 30.0%
!! ATTTTTAGAGGACCAAATTG+CGG + chr3_1:17026098-17026117 None:intergenic 30.0%
! TTGGTGATAAATTCTCAACA+TGG + chr3_1:17026195-17026214 None:intergenic 30.0%
TCACCAAATTAGAATTAGAG+TGG - chr3_1:17026208-17026227 Msa0351100:intron 30.0%
TCACCACTCTAATTCTAATT+TGG + chr3_1:17026214-17026233 None:intergenic 30.0%
! GTGATACTTTTGTATCTTGA+AGG - chr3_1:17026255-17026274 Msa0351100:intron 30.0%
! ATGTCTTTGGAAGATTACTA+CGG - chr3_1:17026291-17026310 Msa0351100:intron 30.0%
ATAAGGAATGAAATTCTTCC+TGG - chr3_1:17026402-17026421 Msa0351100:CDS 30.0%
TGACAATTAAGCAAGAAAAG+CGG + chr3_1:17026529-17026548 None:intergenic 30.0%
! CTTTTCTTGCTTAATTGTCA+GGG - chr3_1:17026529-17026548 Msa0351100:intron 30.0%
!!! GGAAATGGTTATGTTTTTTG+TGG - chr3_1:17026690-17026709 Msa0351100:intron 30.0%
ATATGAAATCACCATATGCT+GGG + chr3_1:17026835-17026854 None:intergenic 30.0%
GTTATTCAAATTGAAAGAGC+AGG - chr3_1:17026908-17026927 Msa0351100:intron 30.0%
ATGATCAATACTCAGTAGAA+TGG + chr3_1:17026958-17026977 None:intergenic 30.0%
ATTCTATGTACATATGGTCA+TGG - chr3_1:17026976-17026995 Msa0351100:intron 30.0%
TTCTATGTACATATGGTCAT+GGG - chr3_1:17026977-17026996 Msa0351100:intron 30.0%
TCTACTAATAGATGTTTGTG+TGG - chr3_1:17027030-17027049 Msa0351100:intron 30.0%
AAAATAAGGGAAAGAATCGT+AGG + chr3_1:17027111-17027130 None:intergenic 30.0%
AACTCACACTTAATCAGTTA+AGG + chr3_1:17027183-17027202 None:intergenic 30.0%
! GAATTCTTTTAAATCCTGTG+CGG - chr3_1:17027253-17027272 Msa0351100:intron 30.0%
! AATTCTTTTAAATCCTGTGC+GGG - chr3_1:17027254-17027273 Msa0351100:intron 30.0%
! TAAAAATGTGTTGACAGCAT+AGG + chr3_1:17027421-17027440 None:intergenic 30.0%
CAGTATTAAGTGATAACAGT+GGG + chr3_1:17027484-17027503 None:intergenic 30.0%
TCAGTATTAAGTGATAACAG+TGG + chr3_1:17027485-17027504 None:intergenic 30.0%
! TCTGTTGTATTTTCTGCTAT+TGG - chr3_1:17027837-17027856 Msa0351100:intron 30.0%
TTTCTTTGAATTCCAACTCT+TGG - chr3_1:17028041-17028060 Msa0351100:intron 30.0%
TTCTTTGAATTCCAACTCTT+GGG - chr3_1:17028042-17028061 Msa0351100:intron 30.0%
GAGAGAGAGTAAACATAAAA+AGG - chr3_1:17028074-17028093 Msa0351100:intron 30.0%
AGAGAGTAAACATAAAAAGG+AGG - chr3_1:17028077-17028096 Msa0351100:intron 30.0%
TGGAACTGATGATTATGATA+AGG - chr3_1:17028152-17028171 Msa0351100:intron 30.0%
! TCTTTTCACAAGTTCAAGAA+TGG + chr3_1:17028213-17028232 None:intergenic 30.0%
ATAGTACCATGAAAAGTAGA+TGG - chr3_1:17028479-17028498 Msa0351100:intron 30.0%
TAGTACCATGAAAAGTAGAT+GGG - chr3_1:17028480-17028499 Msa0351100:intron 30.0%
ATGTTATGTTTACCATTCTG+AGG - chr3_1:17028519-17028538 Msa0351100:intron 30.0%
! AGAGGAATTGTCTTTTATGA+TGG + chr3_1:17028590-17028609 None:intergenic 30.0%
AAAAGACAATTCCTCTACAT+AGG - chr3_1:17028594-17028613 Msa0351100:intron 30.0%
AGTTGAGTATATACGAAACT+TGG - chr3_1:17028673-17028692 Msa0351100:intron 30.0%
! ATGATTTCTTTTCCTTCACA+CGG + chr3_1:17028735-17028754 None:intergenic 30.0%
CTTACATTGAATGCTGAAAT+AGG + chr3_1:17028821-17028840 None:intergenic 30.0%
ATCATCAACTACAATTCTTC+TGG + chr3_1:17029353-17029372 None:intergenic 30.0%
!! GAAGAATTGTAGTTGATGAT+AGG - chr3_1:17029353-17029372 Msa0351100:intron 30.0%
AAACTACAAATGGAAGTGGT+CGG + chr3_1:17024747-17024766 None:intergenic 35.0%
GGAAAAACTACAAATGGAAG+TGG + chr3_1:17024751-17024770 None:intergenic 35.0%
! TCCATTTGTAGTTTTTCCAC+AGG - chr3_1:17024753-17024772 Msa0351100:intron 35.0%
ACCTGTGGAAAAACTACAAA+TGG + chr3_1:17024757-17024776 None:intergenic 35.0%
CTTAACTATAAACTCCGAAG+CGG - chr3_1:17024807-17024826 Msa0351100:intron 35.0%
TATTTGTGATAGAGAGAAGG+TGG - chr3_1:17025063-17025082 Msa0351100:intron 35.0%
TCTATCACATAGAGCTCTTA+TGG - chr3_1:17025172-17025191 Msa0351100:intron 35.0%
AGTGTGATAAGTGTTTGTAC+AGG - chr3_1:17025244-17025263 Msa0351100:intron 35.0%
! ATTAAGTTGTTTACCCAGAC+AGG + chr3_1:17025310-17025329 None:intergenic 35.0%
!! CATAACACTTTGAGACTGTT+TGG + chr3_1:17025589-17025608 None:intergenic 35.0%
TGAATTATAGTACGGATGGA+TGG + chr3_1:17025656-17025675 None:intergenic 35.0%
CTTTATCAATCTGATGCTAC+AGG - chr3_1:17025856-17025875 Msa0351100:intron 35.0%
TATGAGACAGTTGCTTGAAT+GGG - chr3_1:17025922-17025941 Msa0351100:intron 35.0%
! TCCTTATTTCTTGAAGGAGA+AGG - chr3_1:17025976-17025995 Msa0351100:intron 35.0%
TCCTTCTCCTTCAAGAAATA+AGG + chr3_1:17025980-17025999 None:intergenic 35.0%
AAGGAGAAGGAAGAATTGAA+GGG - chr3_1:17025989-17026008 Msa0351100:intron 35.0%
! GTGTGATGACAAGTTTTTGT+GGG + chr3_1:17026147-17026166 None:intergenic 35.0%
! AGTGTGATGACAAGTTTTTG+TGG + chr3_1:17026148-17026167 None:intergenic 35.0%
!! GTATCTTGAAGGCATTGATT+TGG - chr3_1:17026266-17026285 Msa0351100:intron 35.0%
!! CATTGATTTGGTGATGTCTT+TGG - chr3_1:17026278-17026297 Msa0351100:intron 35.0%
CAGATATTTAGGGACAAGTA+TGG + chr3_1:17026499-17026518 None:intergenic 35.0%
CATACTTGTCCCTAAATATC+TGG - chr3_1:17026497-17026516 Msa0351100:intron 35.0%
GACAATTAAGCAAGAAAAGC+GGG + chr3_1:17026528-17026547 None:intergenic 35.0%
! GCTTTTCTTGCTTAATTGTC+AGG - chr3_1:17026528-17026547 Msa0351100:intron 35.0%
CAGAGAATCACGAGTAAAAA+TGG + chr3_1:17026598-17026617 None:intergenic 35.0%
! AGTTTTCGACGAATGTGTTA+AGG - chr3_1:17026629-17026648 Msa0351100:intron 35.0%
TTGGTTCCAGGTATGAATAA+TGG - chr3_1:17026654-17026673 Msa0351100:intron 35.0%
CCTATTCCATTATTCATACC+TGG + chr3_1:17026663-17026682 None:intergenic 35.0%
! CCAGGTATGAATAATGGAAT+AGG - chr3_1:17026660-17026679 Msa0351100:intron 35.0%
! CTTTATGCATTTGAGGTTTC+TGG - chr3_1:17026731-17026750 Msa0351100:intron 35.0%
CATATGAAATCACCATATGC+TGG + chr3_1:17026836-17026855 None:intergenic 35.0%
! TGAAAGAGCAGGATCTATTT+TGG - chr3_1:17026919-17026938 Msa0351100:intron 35.0%
TCAATACTCAGTAGAATGGA+AGG + chr3_1:17026954-17026973 None:intergenic 35.0%
AAAACTTGCATTGCTAGAGA+AGG - chr3_1:17027063-17027082 Msa0351100:intron 35.0%
TGTGTTACGAGATATGGATA+TGG - chr3_1:17027215-17027234 Msa0351100:intron 35.0%
TAATCTGACCAACACATGTA+TGG - chr3_1:17027298-17027317 Msa0351100:CDS 35.0%
GTAATACACCATACATGTGT+TGG + chr3_1:17027309-17027328 None:intergenic 35.0%
! GTTGTCGAAGTGTTAAACTA+AGG + chr3_1:17027344-17027363 None:intergenic 35.0%
GAAGACAGTAATAAACGAAC+AGG + chr3_1:17027462-17027481 None:intergenic 35.0%
! GTCTAGAACAGTAAACTTCA+CGG - chr3_1:17027593-17027612 Msa0351100:intron 35.0%
GATTTCACGTGACAAAATGT+AGG + chr3_1:17027644-17027663 None:intergenic 35.0%
ATTCGAACACTTTCCTCTAA+AGG + chr3_1:17027687-17027706 None:intergenic 35.0%
!! TACAAAGAGAAAGGGGTATT+GGG + chr3_1:17027883-17027902 None:intergenic 35.0%
! TTACAAAGAGAAAGGGGTAT+TGG + chr3_1:17027884-17027903 None:intergenic 35.0%
CTTCTGTTACAAAGAGAAAG+GGG + chr3_1:17027890-17027909 None:intergenic 35.0%
CCTTCTGTTACAAAGAGAAA+GGG + chr3_1:17027891-17027910 None:intergenic 35.0%
ACCTTCTGTTACAAAGAGAA+AGG + chr3_1:17027892-17027911 None:intergenic 35.0%
! TGCCAAAGATCCTTTTCTAA+GGG + chr3_1:17027934-17027953 None:intergenic 35.0%
! ATGCCAAAGATCCTTTTCTA+AGG + chr3_1:17027935-17027954 None:intergenic 35.0%
!!! ATTGGTTTTATAACCAGCGT+AGG - chr3_1:17027969-17027988 Msa0351100:CDS 35.0%
ATGTTTACTCTCTCTCTGTT+AGG + chr3_1:17028070-17028089 None:intergenic 35.0%
TGAAGAAAGTGAAGATGAAG+AGG - chr3_1:17028107-17028126 Msa0351100:intron 35.0%
TGAAGAAGCAAAACCACATT+TGG - chr3_1:17028311-17028330 Msa0351100:intron 35.0%
ATCTCAAAACAGACCAAATG+TGG + chr3_1:17028327-17028346 None:intergenic 35.0%
AGTACCATGAAAAGTAGATG+GGG - chr3_1:17028481-17028500 Msa0351100:intron 35.0%
!! AATTCCCCATCTACTTTTCA+TGG + chr3_1:17028488-17028507 None:intergenic 35.0%
! TGATTTCTTTTCCTTCACAC+GGG + chr3_1:17028734-17028753 None:intergenic 35.0%
!!! AGGTTTTTTACATGAGTCGA+AGG + chr3_1:17028801-17028820 None:intergenic 35.0%
AATGTATAGGGAGTAATGTG+CGG - chr3_1:17028865-17028884 Msa0351100:intron 35.0%
CACACTCACAACAAAAAAGA+GGG + chr3_1:17028938-17028957 None:intergenic 35.0%
CTATCAACTTCGTAATTCTC+TGG - chr3_1:17029149-17029168 Msa0351100:CDS 35.0%
GTAAAGAATCACTACAGTTC+AGG + chr3_1:17029210-17029229 None:intergenic 35.0%
!! TAGCATGGACTATTGATTCT+AGG - chr3_1:17029253-17029272 Msa0351100:intron 35.0%
TCAAGCAGCAAGTTTAACAA+AGG + chr3_1:17029330-17029349 None:intergenic 35.0%
TCTGTTATCATCACACTTGC+AGG + chr3_1:17024639-17024658 None:intergenic 40.0%
AGACTTCGTAAGTAAATGGC+TGG - chr3_1:17024673-17024692 Msa0351100:three_prime_UTR 40.0%
! ATGCAATAAGATGGGGTGTT+GGG - chr3_1:17025453-17025472 Msa0351100:intron 40.0%
GATAAGGGATAAGGAGTTAG+AGG - chr3_1:17025493-17025512 Msa0351100:intron 40.0%
! GGATGGATAGAAGGTTTGTT+TGG + chr3_1:17025639-17025658 None:intergenic 40.0%
CAACCATGTCTCTGGTTAAA+TGG - chr3_1:17025690-17025709 Msa0351100:intron 40.0%
TGACCATTTAACCAGAGACA+TGG + chr3_1:17025696-17025715 None:intergenic 40.0%
TTCATAACCTTGCAAGCAAG+AGG - chr3_1:17025746-17025765 Msa0351100:intron 40.0%
TCATAACCTTGCAAGCAAGA+GGG - chr3_1:17025747-17025766 Msa0351100:intron 40.0%
CTATGAGACAGTTGCTTGAA+TGG - chr3_1:17025921-17025940 Msa0351100:intron 40.0%
ATGAGACAGTTGCTTGAATG+GGG - chr3_1:17025923-17025942 Msa0351100:intron 40.0%
! AGTGGCTCCTTATTTCTTGA+AGG - chr3_1:17025970-17025989 Msa0351100:intron 40.0%
GAAGGAGAAGGAAGAATTGA+AGG - chr3_1:17025988-17026007 Msa0351100:intron 40.0%
GAAGGAAGAATTGAAGGGTA+TGG - chr3_1:17025994-17026013 Msa0351100:intron 40.0%
TAGAGTGGTGACAATGACTT+TGG - chr3_1:17026223-17026242 Msa0351100:intron 40.0%
ATGGCTTGACGATACTCATA+AGG - chr3_1:17026385-17026404 Msa0351100:CDS 40.0%
TGTACATCTGCTCATATTCC+AGG + chr3_1:17026423-17026442 None:intergenic 40.0%
AATTAAGCAAGAAAAGCGGG+AGG + chr3_1:17026525-17026544 None:intergenic 40.0%
TCGTCGAAAACTAAAACCTG+TGG + chr3_1:17026621-17026640 None:intergenic 40.0%
GGAATAGGATTTACGGGAAA+TGG - chr3_1:17026675-17026694 Msa0351100:intron 40.0%
!!! GGTTCCATTGACGTTTTTTC+CGG + chr3_1:17026814-17026833 None:intergenic 40.0%
CAGAGATCCAACTCATAACA+TGG + chr3_1:17027010-17027029 None:intergenic 40.0%
CTAATAGATGTTTGTGTGGC+AGG - chr3_1:17027034-17027053 Msa0351100:intron 40.0%
! AAATGTGTTGACAGCATAGG+TGG + chr3_1:17027418-17027437 None:intergenic 40.0%
! GTTTACTGTTCTAGACGAGA+CGG + chr3_1:17027589-17027608 None:intergenic 40.0%
GGTAGAAGAATCGTCAACAT+AGG + chr3_1:17027666-17027685 None:intergenic 40.0%
GACGATTCTTCTACCTTTAG+AGG - chr3_1:17027671-17027690 Msa0351100:intron 40.0%
! CTGCTATTGGCTAGTTGTTA+TGG - chr3_1:17027850-17027869 Msa0351100:intron 40.0%
CCCTTTCTCTTTGTAACAGA+AGG - chr3_1:17027888-17027907 Msa0351100:intron 40.0%
TAACCTTCCTCCCTTAGAAA+AGG - chr3_1:17027921-17027940 Msa0351100:CDS 40.0%
!! CAAAGATCCTTTTCTAAGGG+AGG + chr3_1:17027931-17027950 None:intergenic 40.0%
CTCCCTTAGAAAAGGATCTT+TGG - chr3_1:17027929-17027948 Msa0351100:CDS 40.0%
ACTCAAAGTAGAGGATAGAG+TGG + chr3_1:17028180-17028199 None:intergenic 40.0%
TGAAGCTACAAACCTCAGAA+TGG + chr3_1:17028534-17028553 None:intergenic 40.0%
CCACACTCACAACAAAAAAG+AGG + chr3_1:17028939-17028958 None:intergenic 40.0%
!!! CCTCTTTTTTGTTGTGAGTG+TGG - chr3_1:17028936-17028955 Msa0351100:intron 40.0%
!!! CTTTTTTGTTGTGAGTGTGG+TGG - chr3_1:17028939-17028958 Msa0351100:intron 40.0%
GGCAACTGTATGCTACATAT+CGG + chr3_1:17028977-17028996 None:intergenic 40.0%
! AATGTTGAAGATTCTGGGGA+TGG - chr3_1:17029084-17029103 Msa0351100:intron 40.0%
GTGATTCTTTACTCATCCTG+TGG - chr3_1:17029218-17029237 Msa0351100:exon 40.0%
GTCCGAGAGATACCTGTAAA+CGG + chr3_1:17024560-17024579 None:intergenic 45.0%
TCATCACACTTGCAGGTTCT+AGG + chr3_1:17024632-17024651 None:intergenic 45.0%
GAGTGTAGAGATGTTACCTG+TGG + chr3_1:17024772-17024791 None:intergenic 45.0%
TCAATCAGTAGTGTCCGCTT+CGG + chr3_1:17024824-17024843 None:intergenic 45.0%
! AAGCGGACACTACTGATTGA+AGG - chr3_1:17024824-17024843 Msa0351100:CDS 45.0%
TTGAACGTATACGCATGTGC+TGG + chr3_1:17024868-17024887 None:intergenic 45.0%
CTATGTGGCAGTGTTATGTC+TGG - chr3_1:17024919-17024938 Msa0351100:intron 45.0%
! AGGAAGCACGAACATAGACA+AGG + chr3_1:17024948-17024967 None:intergenic 45.0%
CATGCAATAAGATGGGGTGT+TGG - chr3_1:17025452-17025471 Msa0351100:intron 45.0%
TATCCCTTATCTCGTACCAG+CGG + chr3_1:17025484-17025503 None:intergenic 45.0%
CTGGTACGAGATAAGGGATA+AGG - chr3_1:17025484-17025503 Msa0351100:intron 45.0%
GATAAGGAGTTAGAGGTCCT+GGG - chr3_1:17025500-17025519 Msa0351100:intron 45.0%
! CTAGGTTTGAGTTTGAACCC+AGG + chr3_1:17025520-17025539 None:intergenic 45.0%
CTGGGTTCAAACTCAAACCT+AGG - chr3_1:17025518-17025537 Msa0351100:intron 45.0%
AGACTGTTTGGGAGAGCTTA+TGG + chr3_1:17025577-17025596 None:intergenic 45.0%
AGTACGGATGGATGGATAGA+AGG + chr3_1:17025648-17025667 None:intergenic 45.0%
CTTAATTGTCAGGGCGCAAA+AGG - chr3_1:17026538-17026557 Msa0351100:intron 45.0%
CGACGAATGTGTTAAGGAGT+TGG - chr3_1:17026635-17026654 Msa0351100:intron 45.0%
! TGTGTTAAGGAGTTGGTTCC+AGG - chr3_1:17026642-17026661 Msa0351100:intron 45.0%
AAACTAAGCAGATGCTGAGC+CGG - chr3_1:17026792-17026811 Msa0351100:intron 45.0%
TGAGCCGGAAAAAACGTCAA+TGG - chr3_1:17026807-17026826 Msa0351100:intron 45.0%
TTTAAATCCTGTGCGGGACT+TGG - chr3_1:17027260-17027279 Msa0351100:CDS 45.0%
TTAAATCCTGTGCGGGACTT+GGG - chr3_1:17027261-17027280 Msa0351100:CDS 45.0%
GAAGAGGTGGATGACAACAT+AGG + chr3_1:17027366-17027385 None:intergenic 45.0%
ATCCACCTCTTCTGTCTTCA+CGG - chr3_1:17027374-17027393 Msa0351100:intron 45.0%
! ATAGGTGGTGCCAATGCTAA+TGG + chr3_1:17027403-17027422 None:intergenic 45.0%
CGAGACGGTAATGATCCTAA+TGG + chr3_1:17027574-17027593 None:intergenic 45.0%
!! AGAGAAAGGGGTATTGGGTA+AGG + chr3_1:17027878-17027897 None:intergenic 45.0%
!! GATCCTTTTCTAAGGGAGGA+AGG + chr3_1:17027927-17027946 None:intergenic 45.0%
TCTGTTAGGAACCCAAGAGT+TGG + chr3_1:17028056-17028075 None:intergenic 45.0%
AATGAAGAGAGTAGCGAGTC+TGG - chr3_1:17028132-17028151 Msa0351100:intron 45.0%
GGTCTATAGTCAATCCGTAG+AGG + chr3_1:17028402-17028421 None:intergenic 45.0%
GGACTGAGTAACCTATGTAG+AGG + chr3_1:17028608-17028627 None:intergenic 45.0%
TGAGTCGAAGGACAAACATG+TGG + chr3_1:17028789-17028808 None:intergenic 45.0%
TGGCTGCTTCTATACTAGCA+TGG - chr3_1:17029238-17029257 Msa0351100:intron 45.0%
!!! TATATTTTTTTACAATATAT+TGG + chr3_1:17028423-17028442 None:intergenic 5.0%
TTGAAACCGTCGCCGTTTAC+AGG - chr3_1:17024545-17024564 Msa0351100:three_prime_UTR 50.0%
GAGATACCTGTAAACGGCGA+CGG + chr3_1:17024554-17024573 None:intergenic 50.0%
CGCCGTTTACAGGTATCTCT+CGG - chr3_1:17024555-17024574 Msa0351100:three_prime_UTR 50.0%
CGTAAGTAAATGGCTGGCAG+AGG - chr3_1:17024679-17024698 Msa0351100:three_prime_UTR 50.0%
AAGTAAATGGCTGGCAGAGG+AGG - chr3_1:17024682-17024701 Msa0351100:three_prime_UTR 50.0%
! CATGTGCTGGCGACATATGT+CGG + chr3_1:17024855-17024874 None:intergenic 50.0%
GACAGGACATACCGTTTGCT+TGG + chr3_1:17025293-17025312 None:intergenic 50.0%
AGCAAACGGTATGTCCTGTC+TGG - chr3_1:17025293-17025312 Msa0351100:intron 50.0%
GCAAACGGTATGTCCTGTCT+GGG - chr3_1:17025294-17025313 Msa0351100:intron 50.0%
GGATAAGGAGTTAGAGGTCC+TGG - chr3_1:17025499-17025518 Msa0351100:intron 50.0%
GTTCTCTGCAACCATGTCTC+TGG - chr3_1:17025682-17025701 Msa0351100:intron 50.0%
AGTCAACCCTCTTGCTTGCA+AGG + chr3_1:17025756-17025775 None:intergenic 50.0%
CGGGAGGAGCCAGATATTTA+GGG + chr3_1:17026509-17026528 None:intergenic 50.0%
TACTCGTGATTCTCTGCCAC+AGG - chr3_1:17026602-17026621 Msa0351100:intron 50.0%
CGTCAATGGAACCCAGCATA+TGG - chr3_1:17026821-17026840 Msa0351100:CDS 50.0%
ATTGCTAGAGAAGGAGCTCC+TGG - chr3_1:17027072-17027091 Msa0351100:intron 50.0%
TTCACGGTGGCCATTAGCAT+TGG - chr3_1:17027390-17027409 Msa0351100:intron 50.0%
TGTCAATTGTAGCGCTGTGC+TGG + chr3_1:17027544-17027563 None:intergenic 50.0%
CATACTGTTTGCCCGTGTGA+AGG - chr3_1:17028720-17028739 Msa0351100:intron 50.0%
GCTAGTATAGAAGCAGCCAC+AGG + chr3_1:17029237-17029256 None:intergenic 50.0%
AAATGGCTGGCAGAGGAGGA+TGG - chr3_1:17024686-17024705 Msa0351100:exon 55.0%
AATGGCTGGCAGAGGAGGAT+GGG - chr3_1:17024687-17024706 Msa0351100:exon 55.0%
AGCTCCGCTGGTACGAGATA+AGG - chr3_1:17025477-17025496 Msa0351100:intron 55.0%
GCTCCGCTGGTACGAGATAA+GGG - chr3_1:17025478-17025497 Msa0351100:intron 55.0%
GCGGGAGGAGCCAGATATTT+AGG + chr3_1:17026510-17026529 None:intergenic 55.0%
GTAGGCATACGTGCTCTTCC+AGG + chr3_1:17027093-17027112 None:intergenic 55.0%
CACCGTGAAGACAGAAGAGG+TGG + chr3_1:17027379-17027398 None:intergenic 55.0%
CACCTCTTCTGTCTTCACGG+TGG - chr3_1:17027377-17027396 Msa0351100:intron 55.0%
CAATTGTAGCGCTGTGCTGG+TGG + chr3_1:17027541-17027560 None:intergenic 55.0%
AGCAACAGCTTCTCCTACGC+TGG + chr3_1:17027985-17028004 None:intergenic 55.0%
ATGGCTGGCAGAGGAGGATG+GGG - chr3_1:17024688-17024707 Msa0351100:exon 60.0%
TCCTGTGCGGGACTTGGGAT+TGG - chr3_1:17027266-17027285 Msa0351100:CDS 60.0%
TCCAATCCCAAGTCCCGCAC+AGG + chr3_1:17027270-17027289 None:intergenic 60.0%
GGCCACCGTGAAGACAGAAG+AGG + chr3_1:17027382-17027401 None:intergenic 60.0%
CTGGCAGAGGAGGATGGGGA+CGG - chr3_1:17024692-17024711 Msa0351100:exon 65.0%
TGGCAGAGGAGGATGGGGAC+GGG - chr3_1:17024693-17024712 Msa0351100:exon 65.0%
! TGTGCTGGTGGCAGTGGCAG+CGG + chr3_1:17027529-17027548 None:intergenic 65.0%
! TAGCGCTGTGCTGGTGGCAG+TGG + chr3_1:17027535-17027554 None:intergenic 65.0%
GGCAGAGGAGGATGGGGACG+GGG - chr3_1:17024694-17024713 Msa0351100:exon 70.0%
GAGGAGGATGGGGACGGGGA+CGG - chr3_1:17024698-17024717 Msa0351100:exon 70.0%
AGGAGGATGGGGACGGGGAC+GGG - chr3_1:17024699-17024718 Msa0351100:exon 70.0%
!! GGGGTGTTGGGTAGCTCCGC+TGG - chr3_1:17025465-17025484 Msa0351100:intron 70.0%
GGAGGATGGGGACGGGGACG+GGG - chr3_1:17024700-17024719 Msa0351100:exon 75.0%
GATGGGGACGGGGACGGGGA+CGG - chr3_1:17024704-17024723 Msa0351100:intron 75.0%
ATGGGGACGGGGACGGGGAC+GGG - chr3_1:17024705-17024724 Msa0351100:intron 75.0%
GCTGGTGGCAGTGGCAGCGG+TGG + chr3_1:17027526-17027545 None:intergenic 75.0%
! TGGGGACGGGGACGGGGACG+GGG - chr3_1:17024706-17024725 Msa0351100:intron 80.0%
! CGGGGACGGGGACGGGGAAG+AGG - chr3_1:17024712-17024731 Msa0351100:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 17024529 17029392 17024529 ID=Msa0351100;Name=Msa0351100
chr3_1 mRNA 17024529 17029392 17024529 ID=Msa0351100-mRNA-1;Parent=Msa0351100;Name=Msa0351100-mRNA-1;_AED=0.18;_eAED=0.18;_QI=51|0.77|0.8|0.9|0.88|0.8|10|174|249
chr3_1 exon 17024529 17024719 17024529 ID=Msa0351100-mRNA-1:exon:4107;Parent=Msa0351100-mRNA-1
chr3_1 exon 17024816 17024864 17024816 ID=Msa0351100-mRNA-1:exon:4106;Parent=Msa0351100-mRNA-1
chr3_1 exon 17025748 17025846 17025748 ID=Msa0351100-mRNA-1:exon:4105;Parent=Msa0351100-mRNA-1
chr3_1 exon 17026319 17026468 17026319 ID=Msa0351100-mRNA-1:exon:4104;Parent=Msa0351100-mRNA-1
chr3_1 exon 17026819 17026865 17026819 ID=Msa0351100-mRNA-1:exon:4103;Parent=Msa0351100-mRNA-1
chr3_1 exon 17027079 17027132 17027079 ID=Msa0351100-mRNA-1:exon:4102;Parent=Msa0351100-mRNA-1
chr3_1 exon 17027258 17027371 17027258 ID=Msa0351100-mRNA-1:exon:4101;Parent=Msa0351100-mRNA-1
chr3_1 exon 17027911 17028043 17027911 ID=Msa0351100-mRNA-1:exon:4100;Parent=Msa0351100-mRNA-1
chr3_1 exon 17029147 17029246 17029147 ID=Msa0351100-mRNA-1:exon:4099;Parent=Msa0351100-mRNA-1
chr3_1 exon 17029355 17029392 17029355 ID=Msa0351100-mRNA-1:exon:4098;Parent=Msa0351100-mRNA-1
chr3_1 five_prime_UTR 17029355 17029392 17029355 ID=Msa0351100-mRNA-1:five_prime_utr;Parent=Msa0351100-mRNA-1
chr3_1 five_prime_UTR 17029234 17029246 17029234 ID=Msa0351100-mRNA-1:five_prime_utr;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17029147 17029233 17029147 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17027911 17028043 17027911 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17027258 17027371 17027258 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17027079 17027132 17027079 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17026819 17026865 17026819 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17026319 17026468 17026319 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17025748 17025846 17025748 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17024816 17024864 17024816 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 CDS 17024703 17024719 17024703 ID=Msa0351100-mRNA-1:cds;Parent=Msa0351100-mRNA-1
chr3_1 three_prime_UTR 17024529 17024702 17024529 ID=Msa0351100-mRNA-1:three_prime_utr;Parent=Msa0351100-mRNA-1
Gene Sequence

>Msa0351100

ATGGCTGGCAGAGGAGGATGGGGACGGGGACGGGGACGGGGAAGAGGCGCATATGTCCGACCACTTCCATTTGTAGTTTTTCCACAGGATATTGATTTACCTGATGTTAAACACGGAAAAATGGATACTTCTATGAGACAGTTGCTTGAATGGGGTTATGATTTTGATAGATATTTTAAAGTGGCTCCTTATTTCTTGAAGGAGAAGGAAGAATTGAAGGGGCGCAAAAGGATGCACGTAGAAAGATTTTCTGACAAGAAGAAGACCATTTTTACTCGTGATTCTCTGCCACAGGTTTTAGTTTTCGACGAATGTGTTAAGGAGTTGGTTCCAGGTAAAACTAAGCAGATGCTGAGCCGGAAAAAACGTCAATGGAACCCAGCATATGGTGAGAAAAAACTTGCATTGCTAGAGAAGGAGCTCCTGGAAGAGCACGAGGTGCCTGTTCGTTTATTACTGTCTTCCCACTGTTATCACTTAATACTGATGTTAATTGTAAGATCTTCCACCGCTGCCACTGCCACCAGCACAGCGCTACAATTGACAAAACTATCCATTAGGATCATTACCGTCTCGTCTAGAACAAGAGAGAGTAAACATAAAAAGGAGGAAGAAGATGAAGAAAGTGAAGATGAAGAGGAAAATGAAGAGAGTAGCGAGTCTGGAACTGATGATTATGATAAGAATCATGATGTTGACGACGATGATTTAAATGTTGAAGATTCTGGGGATGATGAACCTGAACTGTAG

Protein sequence

>Msa0351100

MAGRGGWGRGRGRGRGAYVRPLPFVVFPQDIDLPDVKHGKMDTSMRQLLEWGYDFDRYFKVAPYFLKEKEELKGRKRMHVERFSDKKKTIFTRDSLPQVLVFDECVKELVPGKTKQMLSRKKRQWNPAYGEKKLALLEKELLEEHEVPVRLLLSSHCYHLILMLIVRSSTAATATSTALQLTKLSIRIITVSSRTRESKHKKEEEDEESEDEEENEESSESGTDDYDKNHDVDDDDLNVEDSGDDEPEL*