AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1390460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390460 MtrunA17_Chr4g0055481 97.913 575 12 0 1 575 1 575 0.0 1155
Msa1390460 MtrunA17_Chr1g0210461 49.485 582 271 6 2 573 9 577 0.0 569
Msa1390460 MtrunA17_Chr1g0160231 42.473 558 301 6 3 551 27 573 3.62e-147 437
Msa1390460 MtrunA17_Chr2g0296921 41.081 555 314 5 5 555 34 579 5.54e-146 434
Msa1390460 MtrunA17_Chr8g0381021 41.016 551 310 6 5 550 34 574 2.91e-140 419
Msa1390460 MtrunA17_Chr8g0381051 39.206 579 325 8 3 571 37 598 1.45e-138 415
Msa1390460 MtrunA17_Chr8g0381031 41.304 552 308 6 5 550 35 576 7.85e-134 403
Msa1390460 MtrunA17_Chr8g0358951 36.679 548 334 4 3 547 39 576 9.79e-115 353
Msa1390460 MtrunA17_Chr7g0254011 37.745 408 251 1 30 434 25 432 2.63e-73 246
Msa1390460 MtrunA17_Chr7g0254061 35.222 406 260 1 26 428 15 420 3.31e-72 243
Msa1390460 MtrunA17_Chr6g0460911 33.661 407 258 4 33 434 36 435 5.09e-68 231
Msa1390460 MtrunA17_Chr6g0460881 33.415 407 259 4 33 434 33 432 1.20e-66 228
Msa1390460 MtrunA17_Chr6g0460901 34.091 396 252 4 33 422 34 426 1.37e-66 228
Msa1390460 MtrunA17_Chr7g0215781 31.550 542 339 16 20 547 31 554 2.32e-64 220
Msa1390460 MtrunA17_Chr6g0460891 31.618 408 265 5 30 431 23 422 2.61e-63 220
Msa1390460 MtrunA17_Chr6g0463361 33.065 248 149 4 322 558 2 243 8.86e-33 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390460 AT5G04770.1 52.313 562 250 6 2 552 16 570 0.0 575
Msa1390460 AT3G10600.1 50.521 576 259 6 2 558 15 583 0.0 553
Msa1390460 AT4G21120.1 41.971 548 306 4 3 547 30 568 2.01e-159 468
Msa1390460 AT5G04770.2 54.156 397 174 3 2 391 16 411 1.27e-147 432
Msa1390460 AT3G10600.2 49.324 444 199 6 134 558 1 437 1.81e-144 424
Msa1390460 AT5G04770.3 51.163 430 192 6 134 552 1 423 4.04e-141 416
Msa1390460 AT2G34960.1 38.434 562 325 7 3 560 24 568 4.55e-133 400
Msa1390460 AT1G17120.1 40.290 551 304 6 3 544 41 575 8.76e-124 377
Msa1390460 AT4G21120.2 40.749 427 241 4 124 547 1 418 1.91e-110 337
Msa1390460 AT3G03720.1 36.224 392 245 3 35 422 16 406 9.87e-75 249
Msa1390460 AT5G36940.1 34.286 420 269 2 18 434 8 423 7.94e-71 239
Msa1390460 AT1G58030.1 34.430 395 256 1 37 428 34 428 7.62e-70 237
Msa1390460 AT1G05940.1 31.204 548 338 10 18 546 26 553 1.27e-65 224
Msa1390460 AT1G05940.4 34.878 410 252 6 18 420 26 427 1.15e-61 212
Msa1390460 AT1G05940.3 34.878 410 252 6 18 420 26 427 1.92e-61 212
Msa1390460 AT1G05940.2 28.475 446 285 7 119 546 6 435 2.62e-40 152

Find 146 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTCACTTGGTTGAATTCT+TGG 0.073222 tig0021343:-112848 None:intergenic
AGCCGAGGAGATTGAGAATT+TGG 0.146226 tig0021343:+116559 Msa1390460:CDS
CTATATATCTTGTACGGTTT+TGG 0.184776 tig0021343:+116759 Msa1390460:three_prime_UTR
GGAGAATTCTTGGGATATTT+TGG 0.185427 tig0021343:+113338 Msa1390460:intron
TCACTCTTTGCTTGTGTCAT+AGG 0.192722 tig0021343:+113540 Msa1390460:CDS
AAGTTGGTTACACTCAAATT+TGG 0.199523 tig0021343:-116602 None:intergenic
TATATGAGCACTTAGTTTCT+TGG 0.214314 tig0021343:-112695 None:intergenic
CTGTTTGAATTTCCAAACTA+TGG 0.229022 tig0021343:-116267 None:intergenic
TCAATGGCTTTCCTTAATAT+TGG 0.256994 tig0021343:+115676 Msa1390460:CDS
CCCAACTCCAACCAATATTA+AGG 0.269543 tig0021343:-115687 None:intergenic
CCTTATGCTTCTCCATAGTT+TGG 0.287271 tig0021343:+116255 Msa1390460:CDS
CCATAAGGAGCTATCCCTTT+TGG 0.287938 tig0021343:-114112 None:intergenic
AACTTTACTTTATTGCCTAA+TGG 0.315376 tig0021343:+114273 Msa1390460:CDS
TCCTTAATATTGGTTGGAGT+TGG 0.318656 tig0021343:+115686 Msa1390460:CDS
TCTCTTCTAGTTGCAATGTT+AGG 0.325505 tig0021343:+115754 Msa1390460:CDS
ACATGAAAAGGAAACTTAAT+TGG 0.331326 tig0021343:+112886 Msa1390460:CDS
TCCCATGACACAAAGGTATC+TGG 0.331917 tig0021343:-115782 None:intergenic
CTTTCCAACGCTTTGCTATA+TGG 0.333799 tig0021343:+116483 Msa1390460:CDS
TTATGATGCAGGAGAATTCT+TGG 0.344760 tig0021343:+113328 Msa1390460:intron
ATAGTGTACTTTAGTTATAT+AGG 0.350941 tig0021343:+114163 Msa1390460:CDS
GCAGTTCAAGTTCCAGTTGC+TGG 0.352519 tig0021343:+113068 Msa1390460:CDS
GTTGGAGCAGGTGCAAGTTT+AGG 0.353177 tig0021343:+115721 Msa1390460:CDS
CCAATAGGTAGGCTCTTATA+AGG 0.355464 tig0021343:-114226 None:intergenic
CATGATGGTTCCTTACAATA+AGG 0.362306 tig0021343:+114309 Msa1390460:CDS
TGTCATAATGAGGTTCAATA+TGG 0.363868 tig0021343:-114014 None:intergenic
TCCAACATGTTATAATCCTT+TGG 0.364236 tig0021343:-113488 None:intergenic
CTTCAGCTAACTAACGCATT+TGG 0.368274 tig0021343:-116643 None:intergenic
CCTGTTGCTCTTCATCAATC+TGG 0.370196 tig0021343:+112972 Msa1390460:CDS
ACTTGGTTGAATTCTTGGTC+TGG 0.370346 tig0021343:-112843 None:intergenic
AGTTGGTTACACTCAAATTT+GGG 0.376212 tig0021343:-116601 None:intergenic
GGTGTTAGAGGTGTTCTTGA+TGG 0.391791 tig0021343:+114133 Msa1390460:CDS
GTTGGTGTGTTTGTTACTAC+TGG 0.394063 tig0021343:+112948 Msa1390460:CDS
GGCTCTGTCTTTGTGCATGA+TGG 0.401655 tig0021343:+114294 Msa1390460:CDS
CTGAAAGCTCCTCCAGCAAC+TGG 0.405724 tig0021343:-113080 None:intergenic
TTTATTTCCTATATCATAGC+TGG 0.406170 tig0021343:+113005 Msa1390460:CDS
CCTTATAAGAGCCTACCTAT+TGG 0.406403 tig0021343:+114226 Msa1390460:CDS
CCAAAAGGGATAGCTCCTTA+TGG 0.407325 tig0021343:+114112 Msa1390460:CDS
CCTTAATATTGGTTGGAGTT+GGG 0.411834 tig0021343:+115687 Msa1390460:CDS
ATAGCTCCTTATGGTGTTAG+AGG 0.412926 tig0021343:+114121 Msa1390460:CDS
TGGTATGATCTTGTAGCTCT+TGG 0.419437 tig0021343:+112906 Msa1390460:CDS
CCAGATTGATGAAGAGCAAC+AGG 0.428383 tig0021343:-112972 None:intergenic
GCCGAGGAGATTGAGAATTT+GGG 0.430127 tig0021343:+116560 Msa1390460:CDS
GATTAGCATTGGCACGCTAA+TGG 0.433590 tig0021343:+116127 Msa1390460:CDS
TGGTGGGGCAAATATACTAA+TGG 0.434674 tig0021343:+113358 Msa1390460:CDS
GGGCAAGGCTTGTTCCATCT+TGG 0.436918 tig0021343:+115806 Msa1390460:CDS
TTTGGATTCATCGTTGTGGC+TGG 0.438413 tig0021343:+114055 Msa1390460:CDS
TGACAATGTTGTCATGTTGT+TGG 0.446760 tig0021343:-112754 None:intergenic
GAGAAAATAATCCCAATGTA+TGG 0.450687 tig0021343:+113444 Msa1390460:CDS
AGGTGCAAGTTTAGGTATAG+TGG 0.451944 tig0021343:+115729 Msa1390460:CDS
GAGCCTACCTATTGGAATAG+TGG 0.452705 tig0021343:+114234 Msa1390460:CDS
ACTGAACCCACTATTCCAAT+AGG 0.453533 tig0021343:-114241 None:intergenic
GCCAGATACCTTTGTGTCAT+GGG 0.453690 tig0021343:+115781 Msa1390460:CDS
TGTTGTTGGTTGTTGTAATG+TGG 0.458265 tig0021343:-112740 None:intergenic
TATGATGCAGGAGAATTCTT+GGG 0.458515 tig0021343:+113329 Msa1390460:intron
GATCTTGTAGCTCTTGGAGT+TGG 0.460545 tig0021343:+112912 Msa1390460:CDS
AGTTATTTAAGATTAACATT+TGG 0.461337 tig0021343:+113101 Msa1390460:CDS
AGTTGGGCAAGCAACATTGT+TGG 0.465245 tig0021343:+115703 Msa1390460:CDS
ATAATTGAGTTGATTAGCAT+TGG 0.467575 tig0021343:+116116 Msa1390460:CDS
TGGCTTTCCTTAATATTGGT+TGG 0.469455 tig0021343:+115680 Msa1390460:CDS
CTTGGAGTTGGAGGAATGCT+TGG 0.469596 tig0021343:+112924 Msa1390460:CDS
TGGTGGGGTCTCTTACTCTT+CGG 0.470816 tig0021343:+116293 Msa1390460:CDS
CTTGTAGCTCTTGGAGTTGG+AGG 0.471002 tig0021343:+112915 Msa1390460:CDS
GCCAAAGTACATCCTTCAAC+AGG 0.471515 tig0021343:+115832 Msa1390460:CDS
GTATGGAGAGTGGAAGTTCA+TGG 0.471951 tig0021343:+113461 Msa1390460:CDS
TGTAACCAACTTACAAACTA+AGG 0.473407 tig0021343:+116613 Msa1390460:CDS
TGTACAAGGTTGTTGTTACA+AGG 0.475149 tig0021343:-116359 None:intergenic
CCAAACTATGGAGAAGCATA+AGG 0.477093 tig0021343:-116255 None:intergenic
TTCCACCTTAGTTTGTAAGT+TGG 0.479933 tig0021343:-116618 None:intergenic
ATATGACTGACCTTATTGTA+AGG 0.480341 tig0021343:-114319 None:intergenic
GGTCTGGTGCAGACATGAAA+AGG 0.485575 tig0021343:+112874 Msa1390460:CDS
CACAAACTCCACACAGGCTT+AGG 0.485903 tig0021343:+112796 Msa1390460:CDS
ACTTCCACTCTCCATACATT+GGG 0.486802 tig0021343:-113455 None:intergenic
AAAATGTACATATATATTGT+GGG 0.494757 tig0021343:+116692 Msa1390460:three_prime_UTR
CACGCTAATGGTGTTCTACA+TGG 0.494994 tig0021343:+116139 Msa1390460:CDS
AACCAAGTGAGGCAGAGGTC+TGG 0.496317 tig0021343:+112858 Msa1390460:CDS
TCTCAAATGCTGCTGTAGCT+AGG 0.500116 tig0021343:+113390 Msa1390460:CDS
AGCCTACCTATTGGAATAGT+GGG 0.500222 tig0021343:+114235 Msa1390460:CDS
GCCTGTTGAAGGATGTACTT+TGG 0.501517 tig0021343:-115833 None:intergenic
GTTGGAGGAATGCTTGGTGT+TGG 0.502228 tig0021343:+112930 Msa1390460:CDS
GGAAATTCAAACAGCAATGG+TGG 0.509718 tig0021343:+116276 Msa1390460:CDS
GTGGAGTTTGTGAGAGTGAA+TGG 0.509937 tig0021343:-112785 None:intergenic
AGAACACCTCTAACACCATA+AGG 0.511059 tig0021343:-114127 None:intergenic
TGATATTCCAGCTATGATAT+AGG 0.513325 tig0021343:-113012 None:intergenic
GAAGGTGGCCATGGCATGAA+TGG 0.513555 tig0021343:-116410 None:intergenic
GCAAGCAACATTGTTGGAGC+AGG 0.513760 tig0021343:+115709 Msa1390460:CDS
AAGTGAGGGAGAGAAGAAAG+AGG 0.516262 tig0021343:-116232 None:intergenic
AACTTCCACTCTCCATACAT+TGG 0.516853 tig0021343:-113456 None:intergenic
AAAACTTGGTTAATCCAAAA+GGG 0.521490 tig0021343:+114098 Msa1390460:CDS
GCCAAAGGATTATAACATGT+TGG 0.521646 tig0021343:+113487 Msa1390460:CDS
ATTATGCTATATATCTTGTA+CGG 0.522120 tig0021343:+116753 Msa1390460:three_prime_UTR
AACCATGGCTGAGGAGGTCA+AGG 0.523071 tig0021343:+114201 Msa1390460:CDS
GAAATTCAAACAGCAATGGT+GGG 0.526735 tig0021343:+116277 Msa1390460:CDS
AGAAGAATGAGAGCTACTGC+TGG 0.527933 tig0021343:-113515 None:intergenic
ATGGACATTGAAGGTGGCCA+TGG 0.537476 tig0021343:-116419 None:intergenic
AGCCAGATACCTTTGTGTCA+TGG 0.541144 tig0021343:+115780 Msa1390460:CDS
GAGCATATTCTTGTTGTACA+AGG 0.543125 tig0021343:-116373 None:intergenic
AGCTTCAACCATGGCTGAGG+AGG 0.545111 tig0021343:+114195 Msa1390460:CDS
TGCACAAAGACAGAGCCATT+AGG 0.546466 tig0021343:-114288 None:intergenic
GTGTGTGTAAAGGCGGTGTA+TGG 0.548779 tig0021343:-116202 None:intergenic
AACAAGAATATGCTCAATGT+TGG 0.550044 tig0021343:+116381 Msa1390460:CDS
ATCCTTGACCTCCTCAGCCA+TGG 0.551869 tig0021343:-114203 None:intergenic
GATGATTGATTTCAGTACAA+AGG 0.552981 tig0021343:+113985 Msa1390460:intron
AGAGAAAGCAGCATATTCAA+TGG 0.553203 tig0021343:+115660 Msa1390460:CDS
TTCAGCTTCAACCATGGCTG+AGG 0.555396 tig0021343:+114192 Msa1390460:CDS
TTCAATGGAGTGCCTGTTGA+AGG 0.556143 tig0021343:-115844 None:intergenic
GGAGAAGCATAAGGAAGTGA+GGG 0.556959 tig0021343:-116246 None:intergenic
GATACCTTTGTGTCATGGGA+AGG 0.563239 tig0021343:+115785 Msa1390460:CDS
TTGAGGAAGATGGACATTGA+AGG 0.567242 tig0021343:-116428 None:intergenic
ACCCAAATTCTCAATCTCCT+CGG 0.568939 tig0021343:-116561 None:intergenic
TGGAGAAGCATAAGGAAGTG+AGG 0.569100 tig0021343:-116247 None:intergenic
AATTCAACCAAGTGAGGCAG+AGG 0.569150 tig0021343:+112853 Msa1390460:CDS
TTTGGAAATTCAAACAGCAA+TGG 0.571143 tig0021343:+116273 Msa1390460:CDS
TGTACTTTGGCTAACCAAGA+TGG 0.571883 tig0021343:-115820 None:intergenic
TACCGTCGCTATGTAATCAT+CGG 0.577579 tig0021343:+116179 Msa1390460:CDS
ATGACCATATAGCAAAGCGT+TGG 0.577715 tig0021343:-116487 None:intergenic
CTATGATTCAGCTTCAACCA+TGG 0.580237 tig0021343:+114186 Msa1390460:CDS
ATACCTTTGTGTCATGGGAA+GGG 0.590763 tig0021343:+115786 Msa1390460:CDS
TAATCCCAATGTATGGAGAG+TGG 0.592516 tig0021343:+113451 Msa1390460:CDS
CATGGAACACTGTCATAATG+AGG 0.594067 tig0021343:-114024 None:intergenic
GTTGTGGCTGGTTATTACAA+TGG 0.594223 tig0021343:+114067 Msa1390460:CDS
GTTCAAGTTCCAGTTGCTGG+AGG 0.596218 tig0021343:+113071 Msa1390460:CDS
GGAAAAGAATGCTAGCAACA+TGG 0.601745 tig0021343:+112817 Msa1390460:CDS
TGTTACAAGGCACCATGTGT+TGG 0.603576 tig0021343:-116346 None:intergenic
AGGAACAAAAGTGTGTGTAA+AGG 0.603696 tig0021343:-116212 None:intergenic
GGAAGTTCATGGATTGCCAA+AGG 0.604127 tig0021343:+113472 Msa1390460:CDS
TTTGGGTGGTGTTAATCAAG+TGG 0.606482 tig0021343:+116577 Msa1390460:CDS
GGTATGTGCCATTCATGCCA+TGG 0.610730 tig0021343:+116402 Msa1390460:CDS
TTTCTTTGGATTCATCGTTG+TGG 0.629846 tig0021343:+114051 Msa1390460:CDS
TGGGGTCTCTTACTCTTCGG+TGG 0.630179 tig0021343:+116296 Msa1390460:CDS
AACAAAAGTGTGTGTAAAGG+CGG 0.630640 tig0021343:-116209 None:intergenic
ACCAAGAATTCAACCAAGTG+AGG 0.631416 tig0021343:+112847 Msa1390460:CDS
ATATAGGAAATAAAGACTGA+AGG 0.634540 tig0021343:-112996 None:intergenic
AAATTCAAACAGCAATGGTG+GGG 0.636518 tig0021343:+116278 Msa1390460:CDS
AAATGTACATATATATTGTG+GGG 0.640711 tig0021343:+116693 Msa1390460:three_prime_UTR
AACCAACTTACAAACTAAGG+TGG 0.646197 tig0021343:+116616 Msa1390460:CDS
CACTCTCACAAACTCCACAC+AGG 0.646429 tig0021343:+112790 Msa1390460:CDS
GAGGAGATTGAGAATTTGGG+TGG 0.655023 tig0021343:+116563 Msa1390460:CDS
ACCATAAAGCACATAAAACA+TGG 0.658020 tig0021343:-116519 None:intergenic
AGGAAGATGGACATTGAAGG+TGG 0.658680 tig0021343:-116425 None:intergenic
TTTGTGTCATGGGAAGGGCA+AGG 0.658768 tig0021343:+115791 Msa1390460:CDS
TTGCCCTTCCCATGACACAA+AGG 0.659610 tig0021343:-115789 None:intergenic
GGCCGATGATTACATAGCGA+CGG 0.666130 tig0021343:-116181 None:intergenic
TCACTCTACGTATCAAGCCG+AGG 0.689681 tig0021343:+116544 Msa1390460:CDS
TGAATCCAAAGAAAATCACA+TGG 0.692143 tig0021343:-114042 None:intergenic
TATGACACAAGCAAAGAGTG+AGG 0.719524 tig0021343:-113538 None:intergenic
AACCCACTATTCCAATAGGT+AGG 0.722428 tig0021343:-114237 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAAACTATACTAATT+AGG + tig0021343:113772-113791 Msa1390460:intron 10.0%
!!! ATTTTCAAAATTGTAAATAA+TGG - tig0021343:113911-113930 None:intergenic 10.0%
!! AAGAATGATAATTATTTATT+TGG - tig0021343:113958-113977 None:intergenic 10.0%
!!! ATATTTTGTCAAAAAAAAAT+TGG - tig0021343:114947-114966 None:intergenic 10.0%
!!! TTAAATTTTTTGATTAAATG+TGG + tig0021343:115133-115152 Msa1390460:intron 10.0%
!!! ATTATTTTCCTTTTTTTTTT+TGG - tig0021343:115232-115251 None:intergenic 10.0%
!! AAAAAAAAAAAGGAAAATAA+TGG + tig0021343:115231-115250 Msa1390460:intron 10.0%
!! AAAAAAAAAAGGAAAATAAT+GGG + tig0021343:115232-115251 Msa1390460:intron 10.0%
!!! AAATTTTCAAAAATATTTGA+TGG - tig0021343:115903-115922 None:intergenic 10.0%
!!! AATTTAAAACTATACTAATT+AGG + tig0021343:113772-113791 Msa1390460:intron 10.0%
!!! ATTTTCAAAATTGTAAATAA+TGG - tig0021343:113911-113930 None:intergenic 10.0%
!! AAGAATGATAATTATTTATT+TGG - tig0021343:113958-113977 None:intergenic 10.0%
!!! ATATTTTGTCAAAAAAAAAT+TGG - tig0021343:114947-114966 None:intergenic 10.0%
!!! TTAAATTTTTTGATTAAATG+TGG + tig0021343:115133-115152 Msa1390460:intron 10.0%
!!! ATTATTTTCCTTTTTTTTTT+TGG - tig0021343:115232-115251 None:intergenic 10.0%
!! AAAAAAAAAAAGGAAAATAA+TGG + tig0021343:115231-115250 Msa1390460:intron 10.0%
!! AAAAAAAAAAGGAAAATAAT+GGG + tig0021343:115232-115251 Msa1390460:intron 10.0%
!!! AAATTTTCAAAAATATTTGA+TGG - tig0021343:115903-115922 None:intergenic 10.0%
!!! AGTTATTTAAGATTAACATT+TGG + tig0021343:113101-113120 Msa1390460:CDS 15.0%
!!! ATTAGTATAGTTTTAAATTG+TGG - tig0021343:113771-113790 None:intergenic 15.0%
!! TTTAATTCAAATACATTGTT+AGG - tig0021343:114474-114493 None:intergenic 15.0%
!! TGAATGTATAATTACTAAAA+TGG + tig0021343:114783-114802 Msa1390460:intron 15.0%
!! TATAAAATTTAATGGAGAAT+TGG + tig0021343:115270-115289 Msa1390460:intron 15.0%
!! AAAAATGTACATATATATTG+TGG + tig0021343:116691-116710 Msa1390460:three_prime_UTR 15.0%
!! AAAATGTACATATATATTGT+GGG + tig0021343:116692-116711 Msa1390460:three_prime_UTR 15.0%
!!! AGTTATTTAAGATTAACATT+TGG + tig0021343:113101-113120 Msa1390460:CDS 15.0%
!!! ATTAGTATAGTTTTAAATTG+TGG - tig0021343:113771-113790 None:intergenic 15.0%
!! TTTAATTCAAATACATTGTT+AGG - tig0021343:114474-114493 None:intergenic 15.0%
!! TGAATGTATAATTACTAAAA+TGG + tig0021343:114783-114802 Msa1390460:intron 15.0%
!! TATAAAATTTAATGGAGAAT+TGG + tig0021343:115270-115289 Msa1390460:intron 15.0%
!! AAAAATGTACATATATATTG+TGG + tig0021343:116691-116710 Msa1390460:three_prime_UTR 15.0%
!! AAAATGTACATATATATTGT+GGG + tig0021343:116692-116711 Msa1390460:three_prime_UTR 15.0%
!! ATATCAAACTAAAAAACAGA+AGG - tig0021343:113604-113623 None:intergenic 20.0%
!!! TTTAGTTTGATATTGTATCA+AGG + tig0021343:113611-113630 Msa1390460:intron 20.0%
!! ACTATACTAATTAGGTTAAT+TGG + tig0021343:113780-113799 Msa1390460:intron 20.0%
!! CTATACTAATTAGGTTAATT+GGG + tig0021343:113781-113800 Msa1390460:intron 20.0%
!! TATACTAATTAGGTTAATTG+GGG + tig0021343:113782-113801 Msa1390460:intron 20.0%
!!! TTGGTGTTTTTTATAATGAA+AGG + tig0021343:113868-113887 Msa1390460:intron 20.0%
!!! TGTTTTTTATAATGAAAGGA+TGG + tig0021343:113872-113891 Msa1390460:intron 20.0%
!! ATAGTGTACTTTAGTTATAT+AGG + tig0021343:114163-114182 Msa1390460:CDS 20.0%
!! TATTTGAATTAAATACGTCT+AGG + tig0021343:114481-114500 Msa1390460:intron 20.0%
!!! TATGTTAGTATTTTTCTTCA+GGG - tig0021343:114514-114533 None:intergenic 20.0%
!!! TTATGTTAGTATTTTTCTTC+AGG - tig0021343:114515-114534 None:intergenic 20.0%
!! TTATTAGTTGAACAATGAAT+TGG + tig0021343:114572-114591 Msa1390460:intron 20.0%
!! ATATAAATTATGTGTGTGTT+TGG + tig0021343:114601-114620 Msa1390460:intron 20.0%
!! TGAAAGAATTGATATATGTT+TGG + tig0021343:114693-114712 Msa1390460:intron 20.0%
!!! GAACTGTATTTTTTCTTTTT+TGG - tig0021343:115035-115054 None:intergenic 20.0%
!! TGTATAAAATATCCAAAACT+TGG + tig0021343:115068-115087 Msa1390460:intron 20.0%
!!! TCTTGACCATAAATATTTTT+TGG + tig0021343:115095-115114 Msa1390460:intron 20.0%
!!! CTTGACCATAAATATTTTTT+GGG + tig0021343:115096-115115 Msa1390460:intron 20.0%
!!! TTGACCATAAATATTTTTTG+GGG + tig0021343:115097-115116 Msa1390460:intron 20.0%
!! TTAAATACAAACCAAAATGA+AGG + tig0021343:115165-115184 Msa1390460:intron 20.0%
!!! AAGCTATATATTCTTTGAAA+TGG + tig0021343:115625-115644 Msa1390460:intron 20.0%
!! TTAGTTAATTGTCTTATCTT+TGG + tig0021343:115949-115968 Msa1390460:intron 20.0%
!! TAGTTAATTGTCTTATCTTT+GGG + tig0021343:115950-115969 Msa1390460:intron 20.0%
!! AAATGTACATATATATTGTG+GGG + tig0021343:116693-116712 Msa1390460:three_prime_UTR 20.0%
!! ATTATGCTATATATCTTGTA+CGG + tig0021343:116753-116772 Msa1390460:three_prime_UTR 20.0%
!! ATATCAAACTAAAAAACAGA+AGG - tig0021343:113604-113623 None:intergenic 20.0%
!!! TTTAGTTTGATATTGTATCA+AGG + tig0021343:113611-113630 Msa1390460:intron 20.0%
!! ACTATACTAATTAGGTTAAT+TGG + tig0021343:113780-113799 Msa1390460:intron 20.0%
!! CTATACTAATTAGGTTAATT+GGG + tig0021343:113781-113800 Msa1390460:intron 20.0%
!! TATACTAATTAGGTTAATTG+GGG + tig0021343:113782-113801 Msa1390460:intron 20.0%
!!! TTGGTGTTTTTTATAATGAA+AGG + tig0021343:113868-113887 Msa1390460:intron 20.0%
!!! TGTTTTTTATAATGAAAGGA+TGG + tig0021343:113872-113891 Msa1390460:intron 20.0%
!! ATAGTGTACTTTAGTTATAT+AGG + tig0021343:114163-114182 Msa1390460:CDS 20.0%
!! TATTTGAATTAAATACGTCT+AGG + tig0021343:114481-114500 Msa1390460:intron 20.0%
!!! TATGTTAGTATTTTTCTTCA+GGG - tig0021343:114514-114533 None:intergenic 20.0%
!!! TTATGTTAGTATTTTTCTTC+AGG - tig0021343:114515-114534 None:intergenic 20.0%
!! TTATTAGTTGAACAATGAAT+TGG + tig0021343:114572-114591 Msa1390460:intron 20.0%
!! ATATAAATTATGTGTGTGTT+TGG + tig0021343:114601-114620 Msa1390460:intron 20.0%
!! TGAAAGAATTGATATATGTT+TGG + tig0021343:114693-114712 Msa1390460:intron 20.0%
!!! GAACTGTATTTTTTCTTTTT+TGG - tig0021343:115035-115054 None:intergenic 20.0%
!! TGTATAAAATATCCAAAACT+TGG + tig0021343:115068-115087 Msa1390460:intron 20.0%
!!! TCTTGACCATAAATATTTTT+TGG + tig0021343:115095-115114 Msa1390460:intron 20.0%
!!! CTTGACCATAAATATTTTTT+GGG + tig0021343:115096-115115 Msa1390460:intron 20.0%
!!! TTGACCATAAATATTTTTTG+GGG + tig0021343:115097-115116 Msa1390460:intron 20.0%
!! TTAAATACAAACCAAAATGA+AGG + tig0021343:115165-115184 Msa1390460:intron 20.0%
!!! AAGCTATATATTCTTTGAAA+TGG + tig0021343:115625-115644 Msa1390460:intron 20.0%
!! TTAGTTAATTGTCTTATCTT+TGG + tig0021343:115949-115968 Msa1390460:intron 20.0%
!! TAGTTAATTGTCTTATCTTT+GGG + tig0021343:115950-115969 Msa1390460:intron 20.0%
!! AAATGTACATATATATTGTG+GGG + tig0021343:116693-116712 Msa1390460:three_prime_UTR 20.0%
!! ATTATGCTATATATCTTGTA+CGG + tig0021343:116753-116772 Msa1390460:three_prime_UTR 20.0%
! ACATGAAAAGGAAACTTAAT+TGG + tig0021343:112886-112905 Msa1390460:CDS 25.0%
! ATATAGGAAATAAAGACTGA+AGG - tig0021343:112999-113018 None:intergenic 25.0%
! TTTATTTCCTATATCATAGC+TGG + tig0021343:113005-113024 Msa1390460:CDS 25.0%
!!! GAATATTTGAGTTTTGCTTT+TGG + tig0021343:113422-113441 Msa1390460:CDS 25.0%
! CTTCAAAATCCTTTATATTG+CGG + tig0021343:113738-113757 Msa1390460:intron 25.0%
!! TTTTGGATTAACCAAGTTTT+TGG - tig0021343:114098-114117 None:intergenic 25.0%
! AAAAACTTGGTTAATCCAAA+AGG + tig0021343:114097-114116 Msa1390460:CDS 25.0%
! AAAACTTGGTTAATCCAAAA+GGG + tig0021343:114098-114117 Msa1390460:CDS 25.0%
! AACTTTACTTTATTGCCTAA+TGG + tig0021343:114273-114292 Msa1390460:CDS 25.0%
! AATTCAAATACATTGTTAGG+CGG - tig0021343:114471-114490 None:intergenic 25.0%
! TAAAGAGAATGAATGTTGTT+TGG + tig0021343:114737-114756 Msa1390460:intron 25.0%
!! AAGTTAAATAATAATGGAGC+TGG + tig0021343:115006-115025 Msa1390460:intron 25.0%
! TTAGCCCCAAAAAATATTTA+TGG - tig0021343:115104-115123 None:intergenic 25.0%
!!! AATATTTTTTGGGGCTAATT+TGG + tig0021343:115106-115125 Msa1390460:intron 25.0%
!! TTATCAATTCTCCTTCATTT+TGG - tig0021343:115179-115198 None:intergenic 25.0%
! AAATGAAGGAGAATTGATAA+AGG + tig0021343:115179-115198 Msa1390460:intron 25.0%
! GAATTGATAAAGGACAATAA+AGG + tig0021343:115189-115208 Msa1390460:intron 25.0%
! AGGACAATAAAGGAAAATAA+TGG + tig0021343:115199-115218 Msa1390460:intron 25.0%
! GGACAATAAAGGAAAATAAT+GGG + tig0021343:115200-115219 Msa1390460:intron 25.0%
!!! AATTGCCTTTTTCAATTTTG+AGG + tig0021343:115388-115407 Msa1390460:intron 25.0%
! AGTTAATTGTCTTATCTTTG+GGG + tig0021343:115951-115970 Msa1390460:intron 25.0%
!!! ATAATTGAGTTGATTAGCAT+TGG + tig0021343:116116-116135 Msa1390460:CDS 25.0%
!!! TACATTTTTAGTGTCTATGT+AGG - tig0021343:116680-116699 None:intergenic 25.0%
!! GTAGAATTGATGTTTTCTAA+AGG + tig0021343:116715-116734 Msa1390460:three_prime_UTR 25.0%
!! TATATATCTTGTACGGTTTT+GGG + tig0021343:116760-116779 Msa1390460:three_prime_UTR 25.0%
! ACATGAAAAGGAAACTTAAT+TGG + tig0021343:112886-112905 Msa1390460:CDS 25.0%
! ATATAGGAAATAAAGACTGA+AGG - tig0021343:112999-113018 None:intergenic 25.0%
! TTTATTTCCTATATCATAGC+TGG + tig0021343:113005-113024 Msa1390460:CDS 25.0%
!!! GAATATTTGAGTTTTGCTTT+TGG + tig0021343:113422-113441 Msa1390460:CDS 25.0%
! CTTCAAAATCCTTTATATTG+CGG + tig0021343:113738-113757 Msa1390460:intron 25.0%
!! TTTTGGATTAACCAAGTTTT+TGG - tig0021343:114098-114117 None:intergenic 25.0%
! AAAAACTTGGTTAATCCAAA+AGG + tig0021343:114097-114116 Msa1390460:CDS 25.0%
! AAAACTTGGTTAATCCAAAA+GGG + tig0021343:114098-114117 Msa1390460:CDS 25.0%
! AACTTTACTTTATTGCCTAA+TGG + tig0021343:114273-114292 Msa1390460:CDS 25.0%
! AATTCAAATACATTGTTAGG+CGG - tig0021343:114471-114490 None:intergenic 25.0%
! TAAAGAGAATGAATGTTGTT+TGG + tig0021343:114737-114756 Msa1390460:intron 25.0%
!! AAGTTAAATAATAATGGAGC+TGG + tig0021343:115006-115025 Msa1390460:intron 25.0%
! TTAGCCCCAAAAAATATTTA+TGG - tig0021343:115104-115123 None:intergenic 25.0%
!!! AATATTTTTTGGGGCTAATT+TGG + tig0021343:115106-115125 Msa1390460:intron 25.0%
!! TTATCAATTCTCCTTCATTT+TGG - tig0021343:115179-115198 None:intergenic 25.0%
! AAATGAAGGAGAATTGATAA+AGG + tig0021343:115179-115198 Msa1390460:intron 25.0%
! GAATTGATAAAGGACAATAA+AGG + tig0021343:115189-115208 Msa1390460:intron 25.0%
! AGGACAATAAAGGAAAATAA+TGG + tig0021343:115199-115218 Msa1390460:intron 25.0%
! GGACAATAAAGGAAAATAAT+GGG + tig0021343:115200-115219 Msa1390460:intron 25.0%
!!! AATTGCCTTTTTCAATTTTG+AGG + tig0021343:115388-115407 Msa1390460:intron 25.0%
! AGTTAATTGTCTTATCTTTG+GGG + tig0021343:115951-115970 Msa1390460:intron 25.0%
!!! ATAATTGAGTTGATTAGCAT+TGG + tig0021343:116116-116135 Msa1390460:CDS 25.0%
!!! TACATTTTTAGTGTCTATGT+AGG - tig0021343:116680-116699 None:intergenic 25.0%
!! GTAGAATTGATGTTTTCTAA+AGG + tig0021343:116715-116734 Msa1390460:three_prime_UTR 25.0%
!! TATATATCTTGTACGGTTTT+GGG + tig0021343:116760-116779 Msa1390460:three_prime_UTR 25.0%
TGATATTCCAGCTATGATAT+AGG - tig0021343:113015-113034 None:intergenic 30.0%
!!! TCTTTTTTTGCTTATGATGC+AGG + tig0021343:113317-113336 Msa1390460:intron 30.0%
!!! AATTCTTGGGATATTTTGGT+GGG + tig0021343:113342-113361 Msa1390460:CDS 30.0%
GAGAAAATAATCCCAATGTA+TGG + tig0021343:113444-113463 Msa1390460:CDS 30.0%
TCCAACATGTTATAATCCTT+TGG - tig0021343:113491-113510 None:intergenic 30.0%
TGCAAAATGCGAAAAAAATG+TGG + tig0021343:113675-113694 Msa1390460:intron 30.0%
AATATCCACCCAATGAAATA+AGG - tig0021343:113810-113829 None:intergenic 30.0%
! GATGATTGATTTCAGTACAA+AGG + tig0021343:113985-114004 Msa1390460:intron 30.0%
TGTCATAATGAGGTTCAATA+TGG - tig0021343:114017-114036 None:intergenic 30.0%
TGAATCCAAAGAAAATCACA+TGG - tig0021343:114045-114064 None:intergenic 30.0%
ATATGACTGACCTTATTGTA+AGG - tig0021343:114322-114341 None:intergenic 30.0%
! GCTTTGGATAGAATTGATTA+TGG + tig0021343:114628-114647 Msa1390460:intron 30.0%
GGTGTTCACCAAAAAAAAAA+AGG + tig0021343:115221-115240 Msa1390460:intron 30.0%
! TTCTAGTTAACTCAAAAGCT+AGG + tig0021343:115293-115312 Msa1390460:intron 30.0%
! AAGGCAATTTTTCACATGTT+TGG - tig0021343:115377-115396 None:intergenic 30.0%
TAGAGCCTCAAAATTGAAAA+AGG - tig0021343:115396-115415 None:intergenic 30.0%
TTAATTGCTTTACCTCTAGA+AGG - tig0021343:115505-115524 None:intergenic 30.0%
TCAATGGCTTTCCTTAATAT+TGG + tig0021343:115676-115695 Msa1390460:CDS 30.0%
! AAAAAGATAGTGGCATTCAA+TGG - tig0021343:115862-115881 None:intergenic 30.0%
! ATTGAATGCCACTATCTTTT+TGG + tig0021343:115861-115880 Msa1390460:CDS 30.0%
! TTGAATGCCACTATCTTTTT+GGG + tig0021343:115862-115881 Msa1390460:CDS 30.0%
CTGTTTGAATTTCCAAACTA+TGG - tig0021343:116270-116289 None:intergenic 30.0%
TTTGGAAATTCAAACAGCAA+TGG + tig0021343:116273-116292 Msa1390460:CDS 30.0%
AAAAACTGTGATTGTGATCA+TGG - tig0021343:116324-116343 None:intergenic 30.0%
AACAAGAATATGCTCAATGT+TGG + tig0021343:116381-116400 Msa1390460:CDS 30.0%
TAGTCATGAGAAAAACATTG+AGG - tig0021343:116448-116467 None:intergenic 30.0%
! ACCATGTTTTATGTGCTTTA+TGG + tig0021343:116518-116537 Msa1390460:CDS 30.0%
ACCATAAAGCACATAAAACA+TGG - tig0021343:116522-116541 None:intergenic 30.0%
AGTTGGTTACACTCAAATTT+GGG - tig0021343:116604-116623 None:intergenic 30.0%
! AAGTTGGTTACACTCAAATT+TGG - tig0021343:116605-116624 None:intergenic 30.0%
TGTAACCAACTTACAAACTA+AGG + tig0021343:116613-116632 Msa1390460:CDS 30.0%
! CTATATATCTTGTACGGTTT+TGG + tig0021343:116759-116778 Msa1390460:three_prime_UTR 30.0%
TGATATTCCAGCTATGATAT+AGG - tig0021343:113015-113034 None:intergenic 30.0%
!!! TCTTTTTTTGCTTATGATGC+AGG + tig0021343:113317-113336 Msa1390460:intron 30.0%
!!! AATTCTTGGGATATTTTGGT+GGG + tig0021343:113342-113361 Msa1390460:CDS 30.0%
GAGAAAATAATCCCAATGTA+TGG + tig0021343:113444-113463 Msa1390460:CDS 30.0%
TCCAACATGTTATAATCCTT+TGG - tig0021343:113491-113510 None:intergenic 30.0%
TGCAAAATGCGAAAAAAATG+TGG + tig0021343:113675-113694 Msa1390460:intron 30.0%
AATATCCACCCAATGAAATA+AGG - tig0021343:113810-113829 None:intergenic 30.0%
! GATGATTGATTTCAGTACAA+AGG + tig0021343:113985-114004 Msa1390460:intron 30.0%
TGTCATAATGAGGTTCAATA+TGG - tig0021343:114017-114036 None:intergenic 30.0%
TGAATCCAAAGAAAATCACA+TGG - tig0021343:114045-114064 None:intergenic 30.0%
ATATGACTGACCTTATTGTA+AGG - tig0021343:114322-114341 None:intergenic 30.0%
! GCTTTGGATAGAATTGATTA+TGG + tig0021343:114628-114647 Msa1390460:intron 30.0%
GGTGTTCACCAAAAAAAAAA+AGG + tig0021343:115221-115240 Msa1390460:intron 30.0%
! TTCTAGTTAACTCAAAAGCT+AGG + tig0021343:115293-115312 Msa1390460:intron 30.0%
! AAGGCAATTTTTCACATGTT+TGG - tig0021343:115377-115396 None:intergenic 30.0%
TAGAGCCTCAAAATTGAAAA+AGG - tig0021343:115396-115415 None:intergenic 30.0%
TTAATTGCTTTACCTCTAGA+AGG - tig0021343:115505-115524 None:intergenic 30.0%
TCAATGGCTTTCCTTAATAT+TGG + tig0021343:115676-115695 Msa1390460:CDS 30.0%
! AAAAAGATAGTGGCATTCAA+TGG - tig0021343:115862-115881 None:intergenic 30.0%
! ATTGAATGCCACTATCTTTT+TGG + tig0021343:115861-115880 Msa1390460:CDS 30.0%
! TTGAATGCCACTATCTTTTT+GGG + tig0021343:115862-115881 Msa1390460:CDS 30.0%
CTGTTTGAATTTCCAAACTA+TGG - tig0021343:116270-116289 None:intergenic 30.0%
TTTGGAAATTCAAACAGCAA+TGG + tig0021343:116273-116292 Msa1390460:CDS 30.0%
AAAAACTGTGATTGTGATCA+TGG - tig0021343:116324-116343 None:intergenic 30.0%
AACAAGAATATGCTCAATGT+TGG + tig0021343:116381-116400 Msa1390460:CDS 30.0%
TAGTCATGAGAAAAACATTG+AGG - tig0021343:116448-116467 None:intergenic 30.0%
! ACCATGTTTTATGTGCTTTA+TGG + tig0021343:116518-116537 Msa1390460:CDS 30.0%
ACCATAAAGCACATAAAACA+TGG - tig0021343:116522-116541 None:intergenic 30.0%
AGTTGGTTACACTCAAATTT+GGG - tig0021343:116604-116623 None:intergenic 30.0%
! AAGTTGGTTACACTCAAATT+TGG - tig0021343:116605-116624 None:intergenic 30.0%
TGTAACCAACTTACAAACTA+AGG + tig0021343:116613-116632 Msa1390460:CDS 30.0%
! CTATATATCTTGTACGGTTT+TGG + tig0021343:116759-116778 Msa1390460:three_prime_UTR 30.0%
! TGTTGTTGGTTGTTGTAATG+TGG - tig0021343:112743-112762 None:intergenic 35.0%
TGACAATGTTGTCATGTTGT+TGG - tig0021343:112757-112776 None:intergenic 35.0%
TTATGATGCAGGAGAATTCT+TGG + tig0021343:113328-113347 Msa1390460:intron 35.0%
TATGATGCAGGAGAATTCTT+GGG + tig0021343:113329-113348 Msa1390460:intron 35.0%
! GGAGAATTCTTGGGATATTT+TGG + tig0021343:113338-113357 Msa1390460:intron 35.0%
!! GAATTCTTGGGATATTTTGG+TGG + tig0021343:113341-113360 Msa1390460:CDS 35.0%
!!! ATTCTTGGGATATTTTGGTG+GGG + tig0021343:113343-113362 Msa1390460:CDS 35.0%
GCCAAAGGATTATAACATGT+TGG + tig0021343:113487-113506 Msa1390460:CDS 35.0%
CGAAAAAAATGTGGTTGACA+TGG + tig0021343:113684-113703 Msa1390460:intron 35.0%
! ATTGGGGAACCTTATTTCAT+TGG + tig0021343:113798-113817 Msa1390460:intron 35.0%
! TTGGGGAACCTTATTTCATT+GGG + tig0021343:113799-113818 Msa1390460:intron 35.0%
! GTGTTCCATGTGATTTTCTT+TGG + tig0021343:114037-114056 Msa1390460:CDS 35.0%
TTTCTTTGGATTCATCGTTG+TGG + tig0021343:114051-114070 Msa1390460:CDS 35.0%
!! CAATGGAAGTACCAAAAACT+TGG + tig0021343:114084-114103 Msa1390460:CDS 35.0%
CATGATGGTTCCTTACAATA+AGG + tig0021343:114309-114328 Msa1390460:CDS 35.0%
TAGAATAAGCTGAACCAAAC+AGG + tig0021343:115432-115451 Msa1390460:intron 35.0%
CTAGTTAGAATTCCTTCTAG+AGG + tig0021343:115490-115509 Msa1390460:intron 35.0%
AGAGAAAGCAGCATATTCAA+TGG + tig0021343:115660-115679 Msa1390460:CDS 35.0%
TGGCTTTCCTTAATATTGGT+TGG + tig0021343:115680-115699 Msa1390460:CDS 35.0%
! TCCTTAATATTGGTTGGAGT+TGG + tig0021343:115686-115705 Msa1390460:CDS 35.0%
! CCTTAATATTGGTTGGAGTT+GGG + tig0021343:115687-115706 Msa1390460:CDS 35.0%
! TCTCTTCTAGTTGCAATGTT+AGG + tig0021343:115754-115773 Msa1390460:CDS 35.0%
TTGCTTACCCAAAAAGATAG+TGG - tig0021343:115872-115891 None:intergenic 35.0%
TCAAGCTCTTATCATTAAGC+CGG - tig0021343:115979-115998 None:intergenic 35.0%
ATCAGTTCATTTATTGACGC+AGG + tig0021343:116050-116069 Msa1390460:intron 35.0%
! AACAAAAGTGTGTGTAAAGG+CGG - tig0021343:116212-116231 None:intergenic 35.0%
! AGGAACAAAAGTGTGTGTAA+AGG - tig0021343:116215-116234 None:intergenic 35.0%
GAAATTCAAACAGCAATGGT+GGG + tig0021343:116277-116296 Msa1390460:CDS 35.0%
AAATTCAAACAGCAATGGTG+GGG + tig0021343:116278-116297 Msa1390460:CDS 35.0%
!!! CACAGTTTTTTTCCAACACA+TGG + tig0021343:116334-116353 Msa1390460:CDS 35.0%
! TGTACAAGGTTGTTGTTACA+AGG - tig0021343:116362-116381 None:intergenic 35.0%
! GAGCATATTCTTGTTGTACA+AGG - tig0021343:116376-116395 None:intergenic 35.0%
GAGAAAAACATTGAGGAAGA+TGG - tig0021343:116441-116460 None:intergenic 35.0%
!!! TTGGAAAGAGAGTGTTTTGA+GGG - tig0021343:116471-116490 None:intergenic 35.0%
AACCAACTTACAAACTAAGG+TGG + tig0021343:116616-116635 Msa1390460:CDS 35.0%
!! TTCCACCTTAGTTTGTAAGT+TGG - tig0021343:116621-116640 None:intergenic 35.0%
! TGTTGTTGGTTGTTGTAATG+TGG - tig0021343:112743-112762 None:intergenic 35.0%
TGACAATGTTGTCATGTTGT+TGG - tig0021343:112757-112776 None:intergenic 35.0%
TTATGATGCAGGAGAATTCT+TGG + tig0021343:113328-113347 Msa1390460:intron 35.0%
TATGATGCAGGAGAATTCTT+GGG + tig0021343:113329-113348 Msa1390460:intron 35.0%
! GGAGAATTCTTGGGATATTT+TGG + tig0021343:113338-113357 Msa1390460:intron 35.0%
!! GAATTCTTGGGATATTTTGG+TGG + tig0021343:113341-113360 Msa1390460:CDS 35.0%
!!! ATTCTTGGGATATTTTGGTG+GGG + tig0021343:113343-113362 Msa1390460:CDS 35.0%
GCCAAAGGATTATAACATGT+TGG + tig0021343:113487-113506 Msa1390460:CDS 35.0%
CGAAAAAAATGTGGTTGACA+TGG + tig0021343:113684-113703 Msa1390460:intron 35.0%
! ATTGGGGAACCTTATTTCAT+TGG + tig0021343:113798-113817 Msa1390460:intron 35.0%
! TTGGGGAACCTTATTTCATT+GGG + tig0021343:113799-113818 Msa1390460:intron 35.0%
! GTGTTCCATGTGATTTTCTT+TGG + tig0021343:114037-114056 Msa1390460:CDS 35.0%
TTTCTTTGGATTCATCGTTG+TGG + tig0021343:114051-114070 Msa1390460:CDS 35.0%
!! CAATGGAAGTACCAAAAACT+TGG + tig0021343:114084-114103 Msa1390460:CDS 35.0%
CATGATGGTTCCTTACAATA+AGG + tig0021343:114309-114328 Msa1390460:CDS 35.0%
TAGAATAAGCTGAACCAAAC+AGG + tig0021343:115432-115451 Msa1390460:intron 35.0%
CTAGTTAGAATTCCTTCTAG+AGG + tig0021343:115490-115509 Msa1390460:intron 35.0%
AGAGAAAGCAGCATATTCAA+TGG + tig0021343:115660-115679 Msa1390460:CDS 35.0%
TGGCTTTCCTTAATATTGGT+TGG + tig0021343:115680-115699 Msa1390460:CDS 35.0%
! TCCTTAATATTGGTTGGAGT+TGG + tig0021343:115686-115705 Msa1390460:CDS 35.0%
! CCTTAATATTGGTTGGAGTT+GGG + tig0021343:115687-115706 Msa1390460:CDS 35.0%
! TCTCTTCTAGTTGCAATGTT+AGG + tig0021343:115754-115773 Msa1390460:CDS 35.0%
TTGCTTACCCAAAAAGATAG+TGG - tig0021343:115872-115891 None:intergenic 35.0%
TCAAGCTCTTATCATTAAGC+CGG - tig0021343:115979-115998 None:intergenic 35.0%
ATCAGTTCATTTATTGACGC+AGG + tig0021343:116050-116069 Msa1390460:intron 35.0%
! AACAAAAGTGTGTGTAAAGG+CGG - tig0021343:116212-116231 None:intergenic 35.0%
! AGGAACAAAAGTGTGTGTAA+AGG - tig0021343:116215-116234 None:intergenic 35.0%
GAAATTCAAACAGCAATGGT+GGG + tig0021343:116277-116296 Msa1390460:CDS 35.0%
AAATTCAAACAGCAATGGTG+GGG + tig0021343:116278-116297 Msa1390460:CDS 35.0%
!!! CACAGTTTTTTTCCAACACA+TGG + tig0021343:116334-116353 Msa1390460:CDS 35.0%
! TGTACAAGGTTGTTGTTACA+AGG - tig0021343:116362-116381 None:intergenic 35.0%
! GAGCATATTCTTGTTGTACA+AGG - tig0021343:116376-116395 None:intergenic 35.0%
GAGAAAAACATTGAGGAAGA+TGG - tig0021343:116441-116460 None:intergenic 35.0%
!!! TTGGAAAGAGAGTGTTTTGA+GGG - tig0021343:116471-116490 None:intergenic 35.0%
AACCAACTTACAAACTAAGG+TGG + tig0021343:116616-116635 Msa1390460:CDS 35.0%
!! TTCCACCTTAGTTTGTAAGT+TGG - tig0021343:116621-116640 None:intergenic 35.0%
! ATTCTTTTCCTAAGCCTGTG+TGG - tig0021343:112807-112826 None:intergenic 40.0%
GGAAAAGAATGCTAGCAACA+TGG + tig0021343:112817-112836 Msa1390460:CDS 40.0%
ACTTGGTTGAATTCTTGGTC+TGG - tig0021343:112846-112865 None:intergenic 40.0%
ACCAAGAATTCAACCAAGTG+AGG + tig0021343:112847-112866 Msa1390460:CDS 40.0%
TGGTATGATCTTGTAGCTCT+TGG + tig0021343:112906-112925 Msa1390460:CDS 40.0%
! GTTGGTGTGTTTGTTACTAC+TGG + tig0021343:112948-112967 Msa1390460:CDS 40.0%
TGGTGGGGCAAATATACTAA+TGG + tig0021343:113358-113377 Msa1390460:CDS 40.0%
TAATCCCAATGTATGGAGAG+TGG + tig0021343:113451-113470 Msa1390460:CDS 40.0%
ACTTCCACTCTCCATACATT+GGG - tig0021343:113458-113477 None:intergenic 40.0%
AACTTCCACTCTCCATACAT+TGG - tig0021343:113459-113478 None:intergenic 40.0%
TATGACACAAGCAAAGAGTG+AGG - tig0021343:113541-113560 None:intergenic 40.0%
TCACTCTTTGCTTGTGTCAT+AGG + tig0021343:113540-113559 Msa1390460:CDS 40.0%
!!! GGATTTTGAAGTCTCTGCAA+CGG - tig0021343:113729-113748 None:intergenic 40.0%
TGTGACAGCTAACACAAACT+TGG + tig0021343:113849-113868 Msa1390460:intron 40.0%
CATGGAACACTGTCATAATG+AGG - tig0021343:114027-114046 None:intergenic 40.0%
! GTTGTGGCTGGTTATTACAA+TGG + tig0021343:114067-114086 Msa1390460:CDS 40.0%
! ATAGCTCCTTATGGTGTTAG+AGG + tig0021343:114121-114140 Msa1390460:CDS 40.0%
AGAACACCTCTAACACCATA+AGG - tig0021343:114130-114149 None:intergenic 40.0%
CTATGATTCAGCTTCAACCA+TGG + tig0021343:114186-114205 Msa1390460:CDS 40.0%
CCAATAGGTAGGCTCTTATA+AGG - tig0021343:114229-114248 None:intergenic 40.0%
CCTTATAAGAGCCTACCTAT+TGG + tig0021343:114226-114245 Msa1390460:CDS 40.0%
AGCCTACCTATTGGAATAGT+GGG + tig0021343:114235-114254 Msa1390460:CDS 40.0%
AACCCACTATTCCAATAGGT+AGG - tig0021343:114240-114259 None:intergenic 40.0%
ACTGAACCCACTATTCCAAT+AGG - tig0021343:114244-114263 None:intergenic 40.0%
! GGTCAAGAGTTACCAAGTTT+TGG - tig0021343:115083-115102 None:intergenic 40.0%
CTCTTCTGCAAAAGCTATTC+TGG - tig0021343:115333-115352 None:intergenic 40.0%
! ATTCTAGTTACGAGCCTGTT+TGG - tig0021343:115449-115468 None:intergenic 40.0%
CCCAACTCCAACCAATATTA+AGG - tig0021343:115690-115709 None:intergenic 40.0%
AGGTGCAAGTTTAGGTATAG+TGG + tig0021343:115729-115748 Msa1390460:CDS 40.0%
ATACCTTTGTGTCATGGGAA+GGG + tig0021343:115786-115805 Msa1390460:CDS 40.0%
TGTACTTTGGCTAACCAAGA+TGG - tig0021343:115823-115842 None:intergenic 40.0%
!! TTGTCTTATCTTTGGGGTTC+CGG + tig0021343:115957-115976 Msa1390460:intron 40.0%
TACCGTCGCTATGTAATCAT+CGG + tig0021343:116179-116198 Msa1390460:CDS 40.0%
! CCAAACTATGGAGAAGCATA+AGG - tig0021343:116258-116277 None:intergenic 40.0%
CCTTATGCTTCTCCATAGTT+TGG + tig0021343:116255-116274 Msa1390460:CDS 40.0%
GGAAATTCAAACAGCAATGG+TGG + tig0021343:116276-116295 Msa1390460:CDS 40.0%
TTGAGGAAGATGGACATTGA+AGG - tig0021343:116431-116450 None:intergenic 40.0%
!!! GTTGGAAAGAGAGTGTTTTG+AGG - tig0021343:116472-116491 None:intergenic 40.0%
! CTTTCCAACGCTTTGCTATA+TGG + tig0021343:116483-116502 Msa1390460:CDS 40.0%
ATGACCATATAGCAAAGCGT+TGG - tig0021343:116490-116509 None:intergenic 40.0%
ACCCAAATTCTCAATCTCCT+CGG - tig0021343:116564-116583 None:intergenic 40.0%
! TTTGGGTGGTGTTAATCAAG+TGG + tig0021343:116577-116596 Msa1390460:CDS 40.0%
CTTCAGCTAACTAACGCATT+TGG - tig0021343:116646-116665 None:intergenic 40.0%
! ATTCTTTTCCTAAGCCTGTG+TGG - tig0021343:112807-112826 None:intergenic 40.0%
GGAAAAGAATGCTAGCAACA+TGG + tig0021343:112817-112836 Msa1390460:CDS 40.0%
ACTTGGTTGAATTCTTGGTC+TGG - tig0021343:112846-112865 None:intergenic 40.0%
ACCAAGAATTCAACCAAGTG+AGG + tig0021343:112847-112866 Msa1390460:CDS 40.0%
TGGTATGATCTTGTAGCTCT+TGG + tig0021343:112906-112925 Msa1390460:CDS 40.0%
! GTTGGTGTGTTTGTTACTAC+TGG + tig0021343:112948-112967 Msa1390460:CDS 40.0%
TGGTGGGGCAAATATACTAA+TGG + tig0021343:113358-113377 Msa1390460:CDS 40.0%
TAATCCCAATGTATGGAGAG+TGG + tig0021343:113451-113470 Msa1390460:CDS 40.0%
ACTTCCACTCTCCATACATT+GGG - tig0021343:113458-113477 None:intergenic 40.0%
AACTTCCACTCTCCATACAT+TGG - tig0021343:113459-113478 None:intergenic 40.0%
TATGACACAAGCAAAGAGTG+AGG - tig0021343:113541-113560 None:intergenic 40.0%
TCACTCTTTGCTTGTGTCAT+AGG + tig0021343:113540-113559 Msa1390460:CDS 40.0%
!!! GGATTTTGAAGTCTCTGCAA+CGG - tig0021343:113729-113748 None:intergenic 40.0%
TGTGACAGCTAACACAAACT+TGG + tig0021343:113849-113868 Msa1390460:intron 40.0%
CATGGAACACTGTCATAATG+AGG - tig0021343:114027-114046 None:intergenic 40.0%
! GTTGTGGCTGGTTATTACAA+TGG + tig0021343:114067-114086 Msa1390460:CDS 40.0%
! ATAGCTCCTTATGGTGTTAG+AGG + tig0021343:114121-114140 Msa1390460:CDS 40.0%
AGAACACCTCTAACACCATA+AGG - tig0021343:114130-114149 None:intergenic 40.0%
CTATGATTCAGCTTCAACCA+TGG + tig0021343:114186-114205 Msa1390460:CDS 40.0%
CCAATAGGTAGGCTCTTATA+AGG - tig0021343:114229-114248 None:intergenic 40.0%
CCTTATAAGAGCCTACCTAT+TGG + tig0021343:114226-114245 Msa1390460:CDS 40.0%
AGCCTACCTATTGGAATAGT+GGG + tig0021343:114235-114254 Msa1390460:CDS 40.0%
AACCCACTATTCCAATAGGT+AGG - tig0021343:114240-114259 None:intergenic 40.0%
ACTGAACCCACTATTCCAAT+AGG - tig0021343:114244-114263 None:intergenic 40.0%
! GGTCAAGAGTTACCAAGTTT+TGG - tig0021343:115083-115102 None:intergenic 40.0%
CTCTTCTGCAAAAGCTATTC+TGG - tig0021343:115333-115352 None:intergenic 40.0%
! ATTCTAGTTACGAGCCTGTT+TGG - tig0021343:115449-115468 None:intergenic 40.0%
CCCAACTCCAACCAATATTA+AGG - tig0021343:115690-115709 None:intergenic 40.0%
AGGTGCAAGTTTAGGTATAG+TGG + tig0021343:115729-115748 Msa1390460:CDS 40.0%
ATACCTTTGTGTCATGGGAA+GGG + tig0021343:115786-115805 Msa1390460:CDS 40.0%
TGTACTTTGGCTAACCAAGA+TGG - tig0021343:115823-115842 None:intergenic 40.0%
!! TTGTCTTATCTTTGGGGTTC+CGG + tig0021343:115957-115976 Msa1390460:intron 40.0%
TACCGTCGCTATGTAATCAT+CGG + tig0021343:116179-116198 Msa1390460:CDS 40.0%
! CCAAACTATGGAGAAGCATA+AGG - tig0021343:116258-116277 None:intergenic 40.0%
CCTTATGCTTCTCCATAGTT+TGG + tig0021343:116255-116274 Msa1390460:CDS 40.0%
GGAAATTCAAACAGCAATGG+TGG + tig0021343:116276-116295 Msa1390460:CDS 40.0%
TTGAGGAAGATGGACATTGA+AGG - tig0021343:116431-116450 None:intergenic 40.0%
!!! GTTGGAAAGAGAGTGTTTTG+AGG - tig0021343:116472-116491 None:intergenic 40.0%
! CTTTCCAACGCTTTGCTATA+TGG + tig0021343:116483-116502 Msa1390460:CDS 40.0%
ATGACCATATAGCAAAGCGT+TGG - tig0021343:116490-116509 None:intergenic 40.0%
ACCCAAATTCTCAATCTCCT+CGG - tig0021343:116564-116583 None:intergenic 40.0%
! TTTGGGTGGTGTTAATCAAG+TGG + tig0021343:116577-116596 Msa1390460:CDS 40.0%
CTTCAGCTAACTAACGCATT+TGG - tig0021343:116646-116665 None:intergenic 40.0%
GTGGAGTTTGTGAGAGTGAA+TGG - tig0021343:112788-112807 None:intergenic 45.0%
GCCTCACTTGGTTGAATTCT+TGG - tig0021343:112851-112870 None:intergenic 45.0%
AATTCAACCAAGTGAGGCAG+AGG + tig0021343:112853-112872 Msa1390460:CDS 45.0%
GATCTTGTAGCTCTTGGAGT+TGG + tig0021343:112912-112931 Msa1390460:CDS 45.0%
CCAGATTGATGAAGAGCAAC+AGG - tig0021343:112975-112994 None:intergenic 45.0%
CCTGTTGCTCTTCATCAATC+TGG + tig0021343:112972-112991 Msa1390460:CDS 45.0%
AAAGACGTGTCCAACACGTT+TGG + tig0021343:113182-113201 Msa1390460:intron 45.0%
AAGACGTGTCCAACACGTTT+GGG + tig0021343:113183-113202 Msa1390460:intron 45.0%
TCTCAAATGCTGCTGTAGCT+AGG + tig0021343:113390-113409 Msa1390460:CDS 45.0%
GTATGGAGAGTGGAAGTTCA+TGG + tig0021343:113461-113480 Msa1390460:CDS 45.0%
! GGAAGTTCATGGATTGCCAA+AGG + tig0021343:113472-113491 Msa1390460:CDS 45.0%
AGAAGAATGAGAGCTACTGC+TGG - tig0021343:113518-113537 None:intergenic 45.0%
GGTCTGCAACCGCAATATAA+AGG - tig0021343:113750-113769 None:intergenic 45.0%
! GGGAACCTTATTTCATTGGG+TGG + tig0021343:113802-113821 Msa1390460:intron 45.0%
TTTGGATTCATCGTTGTGGC+TGG + tig0021343:114055-114074 Msa1390460:CDS 45.0%
! CCATAAGGAGCTATCCCTTT+TGG - tig0021343:114115-114134 None:intergenic 45.0%
CCAAAAGGGATAGCTCCTTA+TGG + tig0021343:114112-114131 Msa1390460:CDS 45.0%
!! GGTGTTAGAGGTGTTCTTGA+TGG + tig0021343:114133-114152 Msa1390460:CDS 45.0%
GAGCCTACCTATTGGAATAG+TGG + tig0021343:114234-114253 Msa1390460:CDS 45.0%
TGCACAAAGACAGAGCCATT+AGG - tig0021343:114291-114310 None:intergenic 45.0%
! GTGTGTGTTTGGTTCAGCTT+TGG + tig0021343:114612-114631 Msa1390460:intron 45.0%
AGTTGGGCAAGCAACATTGT+TGG + tig0021343:115703-115722 Msa1390460:CDS 45.0%
AGCCAGATACCTTTGTGTCA+TGG + tig0021343:115780-115799 Msa1390460:CDS 45.0%
GCCAGATACCTTTGTGTCAT+GGG + tig0021343:115781-115800 Msa1390460:CDS 45.0%
!! TCCCATGACACAAAGGTATC+TGG - tig0021343:115785-115804 None:intergenic 45.0%
GATACCTTTGTGTCATGGGA+AGG + tig0021343:115785-115804 Msa1390460:CDS 45.0%
GCCAAAGTACATCCTTCAAC+AGG + tig0021343:115832-115851 Msa1390460:CDS 45.0%
GCCTGTTGAAGGATGTACTT+TGG - tig0021343:115836-115855 None:intergenic 45.0%
! TTCAATGGAGTGCCTGTTGA+AGG - tig0021343:115847-115866 None:intergenic 45.0%
!! GATTAGCATTGGCACGCTAA+TGG + tig0021343:116127-116146 Msa1390460:CDS 45.0%
CACGCTAATGGTGTTCTACA+TGG + tig0021343:116139-116158 Msa1390460:CDS 45.0%
AAGTGAGGGAGAGAAGAAAG+AGG - tig0021343:116235-116254 None:intergenic 45.0%
! GGAGAAGCATAAGGAAGTGA+GGG - tig0021343:116249-116268 None:intergenic 45.0%
! TGGAGAAGCATAAGGAAGTG+AGG - tig0021343:116250-116269 None:intergenic 45.0%
! TGTTACAAGGCACCATGTGT+TGG - tig0021343:116349-116368 None:intergenic 45.0%
AGGAAGATGGACATTGAAGG+TGG - tig0021343:116428-116447 None:intergenic 45.0%
AGCCGAGGAGATTGAGAATT+TGG + tig0021343:116559-116578 Msa1390460:CDS 45.0%
GCCGAGGAGATTGAGAATTT+GGG + tig0021343:116560-116579 Msa1390460:CDS 45.0%
GAGGAGATTGAGAATTTGGG+TGG + tig0021343:116563-116582 Msa1390460:CDS 45.0%
GTGGAGTTTGTGAGAGTGAA+TGG - tig0021343:112788-112807 None:intergenic 45.0%
GCCTCACTTGGTTGAATTCT+TGG - tig0021343:112851-112870 None:intergenic 45.0%
AATTCAACCAAGTGAGGCAG+AGG + tig0021343:112853-112872 Msa1390460:CDS 45.0%
GATCTTGTAGCTCTTGGAGT+TGG + tig0021343:112912-112931 Msa1390460:CDS 45.0%
CCAGATTGATGAAGAGCAAC+AGG - tig0021343:112975-112994 None:intergenic 45.0%
CCTGTTGCTCTTCATCAATC+TGG + tig0021343:112972-112991 Msa1390460:CDS 45.0%
AAAGACGTGTCCAACACGTT+TGG + tig0021343:113182-113201 Msa1390460:intron 45.0%
AAGACGTGTCCAACACGTTT+GGG + tig0021343:113183-113202 Msa1390460:intron 45.0%
TCTCAAATGCTGCTGTAGCT+AGG + tig0021343:113390-113409 Msa1390460:CDS 45.0%
GTATGGAGAGTGGAAGTTCA+TGG + tig0021343:113461-113480 Msa1390460:CDS 45.0%
! GGAAGTTCATGGATTGCCAA+AGG + tig0021343:113472-113491 Msa1390460:CDS 45.0%
AGAAGAATGAGAGCTACTGC+TGG - tig0021343:113518-113537 None:intergenic 45.0%
GGTCTGCAACCGCAATATAA+AGG - tig0021343:113750-113769 None:intergenic 45.0%
! GGGAACCTTATTTCATTGGG+TGG + tig0021343:113802-113821 Msa1390460:intron 45.0%
TTTGGATTCATCGTTGTGGC+TGG + tig0021343:114055-114074 Msa1390460:CDS 45.0%
! CCATAAGGAGCTATCCCTTT+TGG - tig0021343:114115-114134 None:intergenic 45.0%
CCAAAAGGGATAGCTCCTTA+TGG + tig0021343:114112-114131 Msa1390460:CDS 45.0%
!! GGTGTTAGAGGTGTTCTTGA+TGG + tig0021343:114133-114152 Msa1390460:CDS 45.0%
GAGCCTACCTATTGGAATAG+TGG + tig0021343:114234-114253 Msa1390460:CDS 45.0%
TGCACAAAGACAGAGCCATT+AGG - tig0021343:114291-114310 None:intergenic 45.0%
! GTGTGTGTTTGGTTCAGCTT+TGG + tig0021343:114612-114631 Msa1390460:intron 45.0%
AGTTGGGCAAGCAACATTGT+TGG + tig0021343:115703-115722 Msa1390460:CDS 45.0%
AGCCAGATACCTTTGTGTCA+TGG + tig0021343:115780-115799 Msa1390460:CDS 45.0%
GCCAGATACCTTTGTGTCAT+GGG + tig0021343:115781-115800 Msa1390460:CDS 45.0%
!! TCCCATGACACAAAGGTATC+TGG - tig0021343:115785-115804 None:intergenic 45.0%
GATACCTTTGTGTCATGGGA+AGG + tig0021343:115785-115804 Msa1390460:CDS 45.0%
GCCAAAGTACATCCTTCAAC+AGG + tig0021343:115832-115851 Msa1390460:CDS 45.0%
GCCTGTTGAAGGATGTACTT+TGG - tig0021343:115836-115855 None:intergenic 45.0%
! TTCAATGGAGTGCCTGTTGA+AGG - tig0021343:115847-115866 None:intergenic 45.0%
!! GATTAGCATTGGCACGCTAA+TGG + tig0021343:116127-116146 Msa1390460:CDS 45.0%
CACGCTAATGGTGTTCTACA+TGG + tig0021343:116139-116158 Msa1390460:CDS 45.0%
AAGTGAGGGAGAGAAGAAAG+AGG - tig0021343:116235-116254 None:intergenic 45.0%
! GGAGAAGCATAAGGAAGTGA+GGG - tig0021343:116249-116268 None:intergenic 45.0%
! TGGAGAAGCATAAGGAAGTG+AGG - tig0021343:116250-116269 None:intergenic 45.0%
! TGTTACAAGGCACCATGTGT+TGG - tig0021343:116349-116368 None:intergenic 45.0%
AGGAAGATGGACATTGAAGG+TGG - tig0021343:116428-116447 None:intergenic 45.0%
AGCCGAGGAGATTGAGAATT+TGG + tig0021343:116559-116578 Msa1390460:CDS 45.0%
GCCGAGGAGATTGAGAATTT+GGG + tig0021343:116560-116579 Msa1390460:CDS 45.0%
GAGGAGATTGAGAATTTGGG+TGG + tig0021343:116563-116582 Msa1390460:CDS 45.0%
!!! ATATTTAAGTTAAATAATAA+TGG + tig0021343:115000-115019 Msa1390460:intron 5.0%
!! AATCAAAATATAAAATTTAA+TGG + tig0021343:115262-115281 Msa1390460:intron 5.0%
!!! ATATTTAAGTTAAATAATAA+TGG + tig0021343:115000-115019 Msa1390460:intron 5.0%
!! AATCAAAATATAAAATTTAA+TGG + tig0021343:115262-115281 Msa1390460:intron 5.0%
CACTCTCACAAACTCCACAC+AGG + tig0021343:112790-112809 Msa1390460:CDS 50.0%
CACAAACTCCACACAGGCTT+AGG + tig0021343:112796-112815 Msa1390460:CDS 50.0%
GGTCTGGTGCAGACATGAAA+AGG + tig0021343:112874-112893 Msa1390460:CDS 50.0%
CTTGTAGCTCTTGGAGTTGG+AGG + tig0021343:112915-112934 Msa1390460:CDS 50.0%
CTTGGAGTTGGAGGAATGCT+TGG + tig0021343:112924-112943 Msa1390460:CDS 50.0%
!! GTTGGAGGAATGCTTGGTGT+TGG + tig0021343:112930-112949 Msa1390460:CDS 50.0%
! GCAGTTCAAGTTCCAGTTGC+TGG + tig0021343:113068-113087 Msa1390460:CDS 50.0%
! GTTCAAGTTCCAGTTGCTGG+AGG + tig0021343:113071-113090 Msa1390460:CDS 50.0%
! GTGTCCAACACGTTTGGGTT+TGG + tig0021343:113188-113207 Msa1390460:intron 50.0%
CTGTCCAAACCCAAACGTGT+TGG - tig0021343:113195-113214 None:intergenic 50.0%
TTCAGCTTCAACCATGGCTG+AGG + tig0021343:114192-114211 Msa1390460:CDS 50.0%
GGCTCTGTCTTTGTGCATGA+TGG + tig0021343:114294-114313 Msa1390460:CDS 50.0%
GCAAGCAACATTGTTGGAGC+AGG + tig0021343:115709-115728 Msa1390460:CDS 50.0%
GTTGGAGCAGGTGCAAGTTT+AGG + tig0021343:115721-115740 Msa1390460:CDS 50.0%
TTGCCCTTCCCATGACACAA+AGG - tig0021343:115792-115811 None:intergenic 50.0%
TTTGTGTCATGGGAAGGGCA+AGG + tig0021343:115791-115810 Msa1390460:CDS 50.0%
GGCCGATGATTACATAGCGA+CGG - tig0021343:116184-116203 None:intergenic 50.0%
GTGTGTGTAAAGGCGGTGTA+TGG - tig0021343:116205-116224 None:intergenic 50.0%
TGGTGGGGTCTCTTACTCTT+CGG + tig0021343:116293-116312 Msa1390460:CDS 50.0%
! GGTATGTGCCATTCATGCCA+TGG + tig0021343:116402-116421 Msa1390460:CDS 50.0%
ATGGACATTGAAGGTGGCCA+TGG - tig0021343:116422-116441 None:intergenic 50.0%
TCACTCTACGTATCAAGCCG+AGG + tig0021343:116544-116563 Msa1390460:CDS 50.0%
CACTCTCACAAACTCCACAC+AGG + tig0021343:112790-112809 Msa1390460:CDS 50.0%
CACAAACTCCACACAGGCTT+AGG + tig0021343:112796-112815 Msa1390460:CDS 50.0%
GGTCTGGTGCAGACATGAAA+AGG + tig0021343:112874-112893 Msa1390460:CDS 50.0%
CTTGTAGCTCTTGGAGTTGG+AGG + tig0021343:112915-112934 Msa1390460:CDS 50.0%
CTTGGAGTTGGAGGAATGCT+TGG + tig0021343:112924-112943 Msa1390460:CDS 50.0%
!! GTTGGAGGAATGCTTGGTGT+TGG + tig0021343:112930-112949 Msa1390460:CDS 50.0%
! GCAGTTCAAGTTCCAGTTGC+TGG + tig0021343:113068-113087 Msa1390460:CDS 50.0%
! GTTCAAGTTCCAGTTGCTGG+AGG + tig0021343:113071-113090 Msa1390460:CDS 50.0%
! GTGTCCAACACGTTTGGGTT+TGG + tig0021343:113188-113207 Msa1390460:intron 50.0%
CTGTCCAAACCCAAACGTGT+TGG - tig0021343:113195-113214 None:intergenic 50.0%
TTCAGCTTCAACCATGGCTG+AGG + tig0021343:114192-114211 Msa1390460:CDS 50.0%
GGCTCTGTCTTTGTGCATGA+TGG + tig0021343:114294-114313 Msa1390460:CDS 50.0%
GCAAGCAACATTGTTGGAGC+AGG + tig0021343:115709-115728 Msa1390460:CDS 50.0%
GTTGGAGCAGGTGCAAGTTT+AGG + tig0021343:115721-115740 Msa1390460:CDS 50.0%
TTGCCCTTCCCATGACACAA+AGG - tig0021343:115792-115811 None:intergenic 50.0%
TTTGTGTCATGGGAAGGGCA+AGG + tig0021343:115791-115810 Msa1390460:CDS 50.0%
GGCCGATGATTACATAGCGA+CGG - tig0021343:116184-116203 None:intergenic 50.0%
GTGTGTGTAAAGGCGGTGTA+TGG - tig0021343:116205-116224 None:intergenic 50.0%
TGGTGGGGTCTCTTACTCTT+CGG + tig0021343:116293-116312 Msa1390460:CDS 50.0%
! GGTATGTGCCATTCATGCCA+TGG + tig0021343:116402-116421 Msa1390460:CDS 50.0%
ATGGACATTGAAGGTGGCCA+TGG - tig0021343:116422-116441 None:intergenic 50.0%
TCACTCTACGTATCAAGCCG+AGG + tig0021343:116544-116563 Msa1390460:CDS 50.0%
AACCAAGTGAGGCAGAGGTC+TGG + tig0021343:112858-112877 Msa1390460:CDS 55.0%
CTGAAAGCTCCTCCAGCAAC+TGG - tig0021343:113083-113102 None:intergenic 55.0%
AGCTTCAACCATGGCTGAGG+AGG + tig0021343:114195-114214 Msa1390460:CDS 55.0%
AACCATGGCTGAGGAGGTCA+AGG + tig0021343:114201-114220 Msa1390460:CDS 55.0%
ATCCTTGACCTCCTCAGCCA+TGG - tig0021343:114206-114225 None:intergenic 55.0%
! GGGCAAGGCTTGTTCCATCT+TGG + tig0021343:115806-115825 Msa1390460:CDS 55.0%
TGGGGTCTCTTACTCTTCGG+TGG + tig0021343:116296-116315 Msa1390460:CDS 55.0%
GAAGGTGGCCATGGCATGAA+TGG - tig0021343:116413-116432 None:intergenic 55.0%
AACCAAGTGAGGCAGAGGTC+TGG + tig0021343:112858-112877 Msa1390460:CDS 55.0%
CTGAAAGCTCCTCCAGCAAC+TGG - tig0021343:113083-113102 None:intergenic 55.0%
AGCTTCAACCATGGCTGAGG+AGG + tig0021343:114195-114214 Msa1390460:CDS 55.0%
AACCATGGCTGAGGAGGTCA+AGG + tig0021343:114201-114220 Msa1390460:CDS 55.0%
ATCCTTGACCTCCTCAGCCA+TGG - tig0021343:114206-114225 None:intergenic 55.0%
! GGGCAAGGCTTGTTCCATCT+TGG + tig0021343:115806-115825 Msa1390460:CDS 55.0%
TGGGGTCTCTTACTCTTCGG+TGG + tig0021343:116296-116315 Msa1390460:CDS 55.0%
GAAGGTGGCCATGGCATGAA+TGG - tig0021343:116413-116432 None:intergenic 55.0%
CACCAGACCTCTGCCTCACT+TGG - tig0021343:112863-112882 None:intergenic 60.0%
CACCAGACCTCTGCCTCACT+TGG - tig0021343:112863-112882 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0021343 gene 112696 116807 112696 ID=Msa1390460;Name=Msa1390460
tig0021343 mRNA 112696 116807 112696 ID=Msa1390460-mRNA-1;Parent=Msa1390460;Name=Msa1390460-mRNA-1;_AED=0.17;_eAED=0.17;_QI=66|1|1|1|1|1|5|152|575
tig0021343 exon 112696 113122 112696 ID=Msa1390460-mRNA-1:exon:12218;Parent=Msa1390460-mRNA-1
tig0021343 exon 113339 113561 113339 ID=Msa1390460-mRNA-1:exon:12219;Parent=Msa1390460-mRNA-1
tig0021343 exon 114000 114330 114000 ID=Msa1390460-mRNA-1:exon:12220;Parent=Msa1390460-mRNA-1
tig0021343 exon 115655 115883 115655 ID=Msa1390460-mRNA-1:exon:12221;Parent=Msa1390460-mRNA-1
tig0021343 exon 116072 116807 116072 ID=Msa1390460-mRNA-1:exon:12222;Parent=Msa1390460-mRNA-1
tig0021343 five_prime_UTR 112696 112761 112696 ID=Msa1390460-mRNA-1:five_prime_utr;Parent=Msa1390460-mRNA-1
tig0021343 CDS 112762 113122 112762 ID=Msa1390460-mRNA-1:cds;Parent=Msa1390460-mRNA-1
tig0021343 CDS 113339 113561 113339 ID=Msa1390460-mRNA-1:cds;Parent=Msa1390460-mRNA-1
tig0021343 CDS 114000 114330 114000 ID=Msa1390460-mRNA-1:cds;Parent=Msa1390460-mRNA-1
tig0021343 CDS 115655 115883 115655 ID=Msa1390460-mRNA-1:cds;Parent=Msa1390460-mRNA-1
tig0021343 CDS 116072 116655 116072 ID=Msa1390460-mRNA-1:cds;Parent=Msa1390460-mRNA-1
tig0021343 three_prime_UTR 116656 116807 116656 ID=Msa1390460-mRNA-1:three_prime_utr;Parent=Msa1390460-mRNA-1
Gene Sequence

>Msa1390460

ATGACAACATTGTCAAATTATTTCCATTCACTCTCACAAACTCCACACAGGCTTAGGAAAAGAATGCTAGCAACATGGACACCAGACCAAGAATTCAACCAAGTGAGGCAGAGGTCTGGTGCAGACATGAAAAGGAAACTTAATTGGTATGATCTTGTAGCTCTTGGAGTTGGAGGAATGCTTGGTGTTGGTGTGTTTGTTACTACTGGTCCTGTTGCTCTTCATCAATCTGGTCCTTCAGTCTTTATTTCCTATATCATAGCTGGAATATCAGCACTTTTATCGTCTTTGTGTTACACTGAATTTGCAGTTCAAGTTCCAGTTGCTGGAGGAGCTTTCAGTTATTTAAGATTAACATTTGGAGAATTCTTGGGATATTTTGGTGGGGCAAATATACTAATGGAGTATGTTTTCTCAAATGCTGCTGTAGCTAGGAGTTTTACAGAATATTTGAGTTTTGCTTTTGGAGAAAATAATCCCAATGTATGGAGAGTGGAAGTTCATGGATTGCCAAAGGATTATAACATGTTGGATTTTCCAGCAGTAGCTCTCATTCTTCTCCTCACTCTTTGCTTGTGTCATAGTACAAAGGAAAGCTCCATATTGAACCTCATTATGACAGTGTTCCATGTGATTTTCTTTGGATTCATCGTTGTGGCTGGTTATTACAATGGAAGTACCAAAAACTTGGTTAATCCAAAAGGGATAGCTCCTTATGGTGTTAGAGGTGTTCTTGATGGAGCAGCAATAGTGTACTTTAGTTATATAGGCTATGATTCAGCTTCAACCATGGCTGAGGAGGTCAAGGATCCTTATAAGAGCCTACCTATTGGAATAGTGGGTTCAGTTCTTATAACAACTTTACTTTATTGCCTAATGGCTCTGTCTTTGTGCATGATGGTTCCTTACAATAAGATATCAGAGAAAGCAGCATATTCAATGGCTTTCCTTAATATTGGTTGGAGTTGGGCAAGCAACATTGTTGGAGCAGGTGCAAGTTTAGGTATAGTGGCTTCTCTTCTAGTTGCAATGTTAGGACAAGCCAGATACCTTTGTGTCATGGGAAGGGCAAGGCTTGTTCCATCTTGGTTAGCCAAAGTACATCCTTCAACAGGCACTCCATTGAATGCCACTATCTTTTTGGGATTTTGCACTGCATCAATTGCGCTTTTCACAGAACTAGACATTATAATTGAGTTGATTAGCATTGGCACGCTAATGGTGTTCTACATGGTAGCAAATGCTCTAATATACCGTCGCTATGTAATCATCGGCCATACACCGCCTTTACACACACTTTTGTTCCTCTTTCTTCTCTCCCTCACTTCCTTATGCTTCTCCATAGTTTGGAAATTCAAACAGCAATGGTGGGGTCTCTTACTCTTCGGTGGCTCCATGATCACAATCACAGTTTTTTTCCAACACATGGTGCCTTGTAACAACAACCTTGTACAACAAGAATATGCTCAATGTTGGTATGTGCCATTCATGCCATGGCCACCTTCAATGTCCATCTTCCTCAATGTTTTTCTCATGACTACCCTCAAAACACTCTCTTTCCAACGCTTTGCTATATGGTCATGTTTTATTACCATGTTTTATGTGCTTTATGGTGTTCACTCTACGTATCAAGCCGAGGAGATTGAGAATTTGGGTGGTGTTAATCAAGTGGTCCCAAATTTGAGTGTAACCAACTTACAAACTAAGGTGGAAATCCAAATGCGTTAG

Protein sequence

>Msa1390460

MTTLSNYFHSLSQTPHRLRKRMLATWTPDQEFNQVRQRSGADMKRKLNWYDLVALGVGGMLGVGVFVTTGPVALHQSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYFGGANILMEYVFSNAAVARSFTEYLSFAFGENNPNVWRVEVHGLPKDYNMLDFPAVALILLLTLCLCHSTKESSILNLIMTVFHVIFFGFIVVAGYYNGSTKNLVNPKGIAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEVKDPYKSLPIGIVGSVLITTLLYCLMALSLCMMVPYNKISEKAAYSMAFLNIGWSWASNIVGAGASLGIVASLLVAMLGQARYLCVMGRARLVPSWLAKVHPSTGTPLNATIFLGFCTASIALFTELDIIIELISIGTLMVFYMVANALIYRRYVIIGHTPPLHTLLFLFLLSLTSLCFSIVWKFKQQWWGLLLFGGSMITITVFFQHMVPCNNNLVQQEYAQCWYVPFMPWPPSMSIFLNVFLMTTLKTLSFQRFAIWSCFITMFYVLYGVHSTYQAEEIENLGGVNQVVPNLSVTNLQTKVEIQMR*