AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0336430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0336430 MtrunA17_Chr2g0322861 80.625 160 2 1 2 132 140 299 9.19e-86 255
Msa0336430 MtrunA17_Chr4g0024121 57.764 161 38 2 2 132 80 240 1.83e-56 178
Msa0336430 MtrunA17_Chr7g0268501 50.993 151 46 2 9 132 86 235 2.49e-42 142
Msa0336430 MtrunA17_Chr7g0268521 50.993 151 46 2 9 132 86 235 2.49e-42 142
Msa0336430 MtrunA17_Chr2g0292241 41.611 149 56 3 9 127 90 237 1.91e-29 109
Msa0336430 MtrunA17_Chr8g0372601 44.000 150 54 2 3 122 85 234 4.03e-29 107
Msa0336430 MtrunA17_Chr2g0292251 39.161 143 57 2 14 127 95 236 5.05e-28 105
Msa0336430 MtrunA17_Chr2g0292181 39.597 149 59 3 9 127 99 246 8.87e-28 104
Msa0336430 MtrunA17_Chr2g0299691 42.466 146 54 2 6 121 112 257 9.66e-28 104
Msa0336430 MtrunA17_Chr2g0292211 38.926 149 61 2 3 121 95 243 1.42e-27 104
Msa0336430 MtrunA17_Chr2g0291751 38.926 149 61 2 3 121 84 232 2.33e-27 103
Msa0336430 MtrunA17_Chr2g0292101 39.161 143 57 2 9 121 86 228 2.43e-27 103
Msa0336430 MtrunA17_Chr1g0157051 38.095 147 60 3 8 125 84 228 2.71e-27 102
Msa0336430 MtrunA17_Chr5g0404721 42.361 144 53 2 9 122 91 234 3.71e-27 102
Msa0336430 MtrunA17_Chr1g0204011 38.608 158 66 3 3 131 82 237 4.62e-27 102
Msa0336430 MtrunA17_Chr2g0292261 41.135 141 53 2 16 127 98 237 1.49e-26 101
Msa0336430 MtrunA17_Chr2g0292091 39.735 151 60 3 2 121 77 227 1.75e-26 101
Msa0336430 MtrunA17_Chr5g0402581 40.278 144 55 3 8 121 87 229 6.04e-26 99.4
Msa0336430 MtrunA17_Chr8g0371381 37.748 151 63 3 8 129 86 234 7.70e-26 99.0
Msa0336430 MtrunA17_Chr1g0164891 40.426 141 52 2 16 125 159 298 1.06e-25 99.8
Msa0336430 MtrunA17_Chr5g0405991 37.500 152 64 3 2 123 76 226 1.12e-25 98.6
Msa0336430 MtrunA17_Chr5g0402571 39.583 144 56 3 8 121 87 229 1.70e-25 98.2
Msa0336430 MtrunA17_Chr4g0070951 40.141 142 55 2 10 121 88 229 2.75e-25 97.8
Msa0336430 MtrunA17_Chr1g0175561 37.500 144 60 2 8 121 85 228 2.97e-25 97.8
Msa0336430 MtrunA17_Chr7g0258811 39.161 143 57 2 9 121 131 273 1.69e-24 96.3
Msa0336430 MtrunA17_Chr6g0460711 41.135 141 50 3 5 114 78 216 3.54e-24 94.7
Msa0336430 MtrunA17_Chr2g0279061 39.161 143 57 2 10 123 27 168 4.29e-24 93.6
Msa0336430 MtrunA17_Chr3g0128061 39.216 153 62 3 9 131 87 238 5.97e-24 94.0
Msa0336430 MtrunA17_Chr2g0292271 38.926 149 60 3 9 127 90 237 8.58e-24 94.0
Msa0336430 MtrunA17_Chr2g0292111 37.584 149 63 2 3 121 84 232 1.38e-23 93.6
Msa0336430 MtrunA17_Chr1g0155611 37.107 159 70 2 3 131 101 259 1.87e-23 93.2
Msa0336430 MtrunA17_Chr2g0279041 39.161 143 57 2 10 123 86 227 1.90e-23 92.8
Msa0336430 MtrunA17_Chr3g0106921 41.549 142 45 4 8 118 85 219 2.56e-23 92.4
Msa0336430 MtrunA17_Chr4g0076211 38.514 148 60 3 9 127 99 244 3.38e-23 92.4
Msa0336430 MtrunA17_Chr2g0296621 36.667 150 64 3 6 126 105 252 3.64e-23 92.4
Msa0336430 MtrunA17_Chr5g0432351 38.356 146 50 3 9 121 86 224 8.76e-23 90.9
Msa0336430 MtrunA17_Chr1g0194151 37.333 150 61 3 8 125 90 238 9.00e-23 91.3
Msa0336430 MtrunA17_Chr1g0194271 36.000 150 63 3 8 125 90 238 1.10e-22 90.9
Msa0336430 MtrunA17_Chr3g0114451 38.961 154 55 5 10 132 88 233 1.17e-22 90.5
Msa0336430 MtrunA17_Chr3g0129051 41.985 131 46 2 3 103 83 213 2.48e-22 89.7
Msa0336430 MtrunA17_Chr3g0129061 41.985 131 46 2 3 103 83 213 2.70e-22 89.7
Msa0336430 MtrunA17_Chr7g0225221 35.404 161 69 3 2 131 78 234 6.15e-22 88.6
Msa0336430 MtrunA17_Chr4g0063671 37.162 148 63 2 9 127 79 225 7.88e-22 88.2
Msa0336430 MtrunA17_Chr3g0129041 43.200 125 41 2 9 103 89 213 8.94e-22 88.2
Msa0336430 MtrunA17_Chr2g0292291 36.000 150 65 3 9 128 91 239 2.21e-21 87.4
Msa0336430 MtrunA17_Chr2g0292151 37.086 151 64 3 2 121 82 232 2.60e-21 87.4
Msa0336430 MtrunA17_Chr8g0364291 32.051 156 74 3 8 132 83 237 4.92e-21 86.3
Msa0336430 MtrunA17_Chr4g0046131 33.333 159 74 3 5 132 101 258 5.42e-21 86.3
Msa0336430 MtrunA17_Chr1g0188431 35.570 149 59 4 2 120 92 233 5.61e-21 86.3
Msa0336430 MtrunA17_Chr5g0432341 36.301 146 53 3 9 121 86 224 5.66e-21 86.3
Msa0336430 MtrunA17_Chr5g0400331 40.984 122 42 2 9 100 87 208 1.20e-20 85.5
Msa0336430 MtrunA17_Chr2g0320071 40.800 125 44 2 9 103 86 210 1.41e-20 85.1
Msa0336430 MtrunA17_Chr2g0320051 40.800 125 44 2 9 103 86 210 2.66e-20 84.3
Msa0336430 MtrunA17_Chr5g0432321 47.126 87 39 1 35 121 13 92 3.60e-20 80.1
Msa0336430 MtrunA17_Chr2g0320061 40.800 125 44 2 9 103 86 210 5.04e-20 83.6
Msa0336430 MtrunA17_Chr4g0013201 37.097 124 48 2 8 101 106 229 5.20e-20 83.6
Msa0336430 MtrunA17_Chr4g0043391 37.209 129 51 2 3 101 82 210 5.41e-20 83.6
Msa0336430 MtrunA17_Chr2g0320101 40.000 125 45 2 9 103 86 210 6.18e-20 83.2
Msa0336430 MtrunA17_Chr3g0114461 45.833 96 43 3 38 132 19 106 1.14e-19 80.5
Msa0336430 MtrunA17_Chr2g0329641 31.915 141 65 2 10 121 96 234 1.58e-19 82.4
Msa0336430 MtrunA17_Chr1g0213061 39.695 131 48 3 3 103 82 211 1.70e-19 82.0
Msa0336430 MtrunA17_Chr4g0068621 36.000 150 62 4 3 121 93 239 2.33e-19 82.0
Msa0336430 MtrunA17_Chr4g0038171 37.209 129 51 2 3 101 79 207 2.41e-19 81.6
Msa0336430 MtrunA17_Chr4g0072091 46.429 84 45 0 38 121 144 227 2.73e-19 81.6
Msa0336430 MtrunA17_Chr5g0432331 34.932 146 55 3 9 121 117 255 3.43e-19 81.6
Msa0336430 MtrunA17_Chr5g0432441 38.028 142 50 4 8 118 90 224 4.09e-19 81.3
Msa0336430 MtrunA17_Chr5g0401431 32.484 157 73 3 6 129 85 241 4.30e-19 81.3
Msa0336430 MtrunA17_Chr2g0292281 45.833 96 50 2 33 127 39 133 2.23e-18 77.8
Msa0336430 MtrunA17_Chr1g0148021 32.298 161 76 3 2 129 80 240 2.88e-18 79.0
Msa0336430 MtrunA17_Chr7g0254201 30.464 151 72 3 3 122 75 223 4.54e-18 78.2
Msa0336430 MtrunA17_Chr2g0278671 36.667 150 64 3 2 122 76 223 4.87e-18 78.2
Msa0336430 MtrunA17_Chr5g0438021 36.429 140 52 3 9 118 92 224 5.54e-18 78.2
Msa0336430 MtrunA17_Chr7g0244461 34.266 143 57 3 9 121 81 216 9.78e-18 77.4
Msa0336430 MtrunA17_Chr4g0004591 41.573 89 51 1 37 125 157 244 1.91e-17 76.6
Msa0336430 MtrunA17_Chr7g0244451 33.793 145 59 3 8 122 84 221 2.13e-17 76.3
Msa0336430 MtrunA17_Chr4g0053871 33.125 160 69 4 3 129 82 236 2.55e-17 76.3
Msa0336430 MtrunA17_Chr2g0320031 37.398 123 47 2 9 101 87 209 4.09e-17 75.5
Msa0336430 MtrunA17_Chr6g0477071 33.333 147 62 3 3 120 109 248 4.73e-17 75.5
Msa0336430 MtrunA17_Chr4g0013171 34.641 153 60 5 2 121 80 225 4.84e-17 75.5
Msa0336430 MtrunA17_Chr5g0421411 30.612 147 70 4 8 123 41 186 7.35e-17 74.7
Msa0336430 MtrunA17_Chr2g0320091 35.294 153 61 4 9 131 86 230 1.27e-16 74.3
Msa0336430 MtrunA17_Chr4g0013821 32.680 153 73 4 9 131 89 241 1.55e-16 74.3
Msa0336430 MtrunA17_Chr2g0311251 33.103 145 68 1 6 121 70 214 2.33e-16 73.6
Msa0336430 MtrunA17_Chr7g0224371 36.296 135 53 3 8 112 91 222 2.63e-16 73.6
Msa0336430 MtrunA17_Chr1g0197411 28.758 153 77 3 6 127 87 238 5.15e-16 72.8
Msa0336430 MtrunA17_Chr2g0316481 32.414 145 69 1 6 121 136 280 6.53e-16 72.8
Msa0336430 MtrunA17_Chr4g0013181 33.987 153 61 5 2 121 112 257 9.86e-16 72.0
Msa0336430 MtrunA17_Chr2g0316791 32.414 145 69 1 6 121 136 280 1.65e-15 71.6
Msa0336430 MtrunA17_Chr4g0013191 29.452 146 66 3 8 123 106 244 1.66e-15 71.2
Msa0336430 MtrunA17_Chr3g0106901 30.556 144 63 3 9 122 92 228 3.84e-15 70.1
Msa0336430 MtrunA17_Chr4g0013721 31.690 142 67 2 9 120 161 302 5.68e-15 70.1
Msa0336430 MtrunA17_Chr2g0316191 31.034 145 71 1 6 121 136 280 4.32e-14 67.8
Msa0336430 MtrunA17_Chr3g0107881 29.605 152 67 3 3 121 82 226 5.44e-14 67.0
Msa0336430 MtrunA17_Chr6g0467161 40.625 96 48 4 38 132 165 252 2.87e-13 65.1
Msa0336430 MtrunA17_Chr6g0467121 32.895 152 63 5 9 129 132 275 3.59e-13 65.1
Msa0336430 MtrunA17_Chr4g0013811 45.312 64 35 0 38 101 15 78 5.41e-11 55.1
Msa0336430 MtrunA17_Chr2g0311241 38.095 84 52 0 38 121 221 304 6.94e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0336430 AT4G11290.1 61.392 158 32 1 4 132 82 239 3.38e-61 191
Msa0336430 AT1G05260.1 59.748 159 35 1 2 131 79 237 8.97e-59 184
Msa0336430 AT3G21770.1 55.000 160 43 1 2 132 82 241 1.15e-53 171
Msa0336430 AT5G15180.1 46.250 160 56 2 2 132 85 243 1.14e-40 138
Msa0336430 AT3G01190.1 46.250 160 54 3 2 132 79 235 5.99e-37 128
Msa0336430 AT1G05240.1 43.137 153 57 2 2 125 79 230 2.09e-35 124
Msa0336430 AT1G05250.1 43.137 153 57 2 2 125 79 230 2.09e-35 124
Msa0336430 AT2G39040.1 45.833 144 48 1 9 122 108 251 6.62e-33 118
Msa0336430 AT2G18150.1 43.662 142 50 2 10 121 98 239 9.85e-30 110
Msa0336430 AT3G03670.1 39.456 147 60 1 4 121 79 225 2.20e-29 108
Msa0336430 AT4G36430.1 41.060 151 58 3 2 121 83 233 3.47e-28 105
Msa0336430 AT5G51890.1 39.610 154 61 4 2 125 79 230 1.95e-25 98.6
Msa0336430 AT5G06730.1 37.500 144 60 2 8 121 93 236 3.30e-25 98.2
Msa0336430 AT5G06720.1 37.500 144 60 2 8 121 92 235 6.35e-25 97.4
Msa0336430 AT2G18140.1 38.732 142 57 2 10 121 97 238 8.45e-25 97.1
Msa0336430 AT3G50990.1 38.926 149 61 2 3 121 96 244 1.61e-24 96.3
Msa0336430 AT2G38390.1 39.241 158 65 3 3 129 86 243 2.59e-24 95.9
Msa0336430 AT1G49570.1 37.931 145 60 2 3 117 103 247 2.60e-24 95.9
Msa0336430 AT5G66390.1 41.259 143 54 2 9 121 94 236 3.24e-24 95.5
Msa0336430 AT1G44970.1 38.411 151 63 2 3 123 100 250 3.45e-24 95.5
Msa0336430 AT5G42180.1 34.266 143 64 2 8 121 83 224 2.29e-23 92.8
Msa0336430 AT3G32980.1 38.000 150 62 3 3 121 86 235 1.32e-22 91.3
Msa0336430 AT5G19890.1 38.194 144 58 3 9 122 88 230 1.90e-22 90.5
Msa0336430 AT2G38380.1 37.975 158 67 3 3 129 86 243 2.00e-22 90.9
Msa0336430 AT5G14130.1 36.667 150 64 2 2 120 85 234 2.63e-22 90.1
Msa0336430 AT5G14130.2 36.667 150 64 2 2 120 126 275 3.08e-22 90.5
Msa0336430 AT5G17820.1 37.419 155 63 4 2 127 77 226 3.73e-22 89.4
Msa0336430 AT4G33870.1 35.616 146 64 2 9 125 129 273 3.81e-22 90.5
Msa0336430 AT5G17820.2 37.419 155 63 4 2 127 130 279 1.00e-21 89.0
Msa0336430 AT2G41480.1 36.054 147 64 2 6 123 84 229 1.05e-21 88.6
Msa0336430 AT3G49110.1 38.667 150 61 3 3 121 88 237 3.02e-21 87.4
Msa0336430 AT4G08770.1 37.333 150 63 3 3 121 79 228 4.22e-21 87.0
Msa0336430 AT3G49120.1 38.000 150 62 3 3 121 87 236 1.02e-20 86.3
Msa0336430 AT5G05340.1 41.129 124 43 2 10 103 92 215 1.04e-20 85.9
Msa0336430 AT5G64120.1 36.620 142 59 3 10 122 94 233 5.90e-20 84.0
Msa0336430 AT4G08780.1 36.667 150 64 3 3 121 79 228 6.35e-20 84.0
Msa0336430 AT1G30870.1 33.562 146 66 3 10 126 110 253 1.35e-19 83.2
Msa0336430 AT2G35380.2 39.669 121 43 2 9 99 3 123 2.24e-19 81.3
Msa0336430 AT5G22410.1 34.459 148 63 3 9 125 86 230 4.58e-19 81.3
Msa0336430 AT4G25980.1 34.965 143 63 2 9 122 85 226 6.99e-19 80.9
Msa0336430 AT2G35380.1 39.669 121 43 2 9 99 91 211 7.79e-19 80.9
Msa0336430 AT2G18980.1 44.048 84 47 0 38 121 144 227 1.29e-18 80.1
Msa0336430 AT2G34060.1 34.000 150 68 2 3 121 99 248 5.52e-18 78.6
Msa0336430 AT5G58390.1 36.885 122 47 2 10 101 84 205 1.75e-17 77.0
Msa0336430 AT4G33420.1 34.899 149 60 4 2 120 90 231 2.48e-17 76.6
Msa0336430 AT4G33420.2 34.459 148 62 4 2 120 137 278 2.92e-17 76.6
Msa0336430 AT4G37530.2 40.217 92 55 0 38 129 150 241 7.07e-17 75.1
Msa0336430 AT4G16270.1 37.190 121 46 2 9 99 111 231 9.51e-17 75.1
Msa0336430 AT4G37530.1 40.217 92 55 0 38 129 150 241 1.35e-16 74.7
Msa0336430 AT4G37520.2 30.128 156 79 3 4 129 83 238 8.35e-16 72.4
Msa0336430 AT4G30170.1 40.476 84 50 0 38 121 146 229 1.07e-15 72.0
Msa0336430 AT4G37520.1 38.043 92 57 0 38 129 150 241 1.14e-15 72.0
Msa0336430 AT5G67400.1 31.973 147 67 3 8 121 87 233 1.15e-15 72.0
Msa0336430 AT5G58400.1 37.302 126 48 3 9 103 91 216 1.17e-15 72.0
Msa0336430 AT2G22420.1 30.405 148 73 2 3 120 78 225 1.41e-15 72.0
Msa0336430 AT1G71695.1 33.333 150 63 4 4 121 100 244 2.15e-15 71.6
Msa0336430 AT5G19880.1 33.103 145 66 3 8 121 87 231 2.47e-14 68.6
Msa0336430 AT4G17690.1 30.968 155 70 4 8 131 86 234 3.03e-14 68.2
Msa0336430 AT5G64100.1 30.435 138 65 2 9 117 95 230 3.91e-14 67.8
Msa0336430 AT4G26010.1 30.769 156 67 5 7 132 81 225 5.37e-14 67.4
Msa0336430 AT4G26010.2 31.169 154 65 5 9 132 111 253 5.49e-14 67.4
Msa0336430 AT2G24800.1 32.258 155 71 4 10 132 90 242 8.33e-14 67.0
Msa0336430 AT1G77100.1 34.932 146 57 5 10 125 85 222 4.39e-13 64.7
Msa0336430 AT5G47000.1 30.769 156 71 5 3 127 89 238 4.62e-13 64.7
Msa0336430 AT3G49960.1 35.870 92 59 0 38 129 150 241 5.37e-13 64.7
Msa0336430 AT4G31760.1 34.667 150 60 6 10 125 88 233 8.61e-13 63.9

Find 52 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAATCAATGGAGAAAA+TGG 0.079582 2_4:+55834573 Msa0336430:three_prime_UTR
GAAATACAAGGATCCATTTA+AGG 0.201889 2_4:-55835004 None:intergenic
CCTCCAAATCTTACTGTTAG+AGG 0.255087 2_4:+55833649 Msa0336430:CDS
ATCAAATGTGTTTCGACTTC+CGG 0.258605 2_4:-55834416 None:intergenic
CTTGATTGGCAAAGAGAGTT+TGG 0.269943 2_4:-55834028 None:intergenic
TCTTACACTTGAATGTCTTT+AGG 0.278429 2_4:-55834358 None:intergenic
AACCAAGGTGCATCCTTAAA+TGG 0.288049 2_4:+55834991 Msa0336430:three_prime_UTR
GAAGGTTGGTTGGTTACATT+AGG 0.327799 2_4:+55834897 Msa0336430:three_prime_UTR
TCAAATGTGTTTCGACTTCC+GGG 0.337076 2_4:-55834415 None:intergenic
TTCCAGTAAAATTGTATAAA+CGG 0.349083 2_4:-55834292 None:intergenic
AAAGACTTAGTCCTCCTATC+TGG 0.355421 2_4:+55834062 Msa0336430:CDS
AGTTTGGAGGGTGGTGAAGT+TGG 0.356287 2_4:-55834012 None:intergenic
GGAAAGTTCCAACAGGTAGA+AGG 0.373285 2_4:+55833934 Msa0336430:intron
ATATATTATTGACTCTGCTT+TGG 0.382069 2_4:-55834869 None:intergenic
AAGCCTCTAACAGTAAGATT+TGG 0.388544 2_4:-55833652 None:intergenic
GTCAATAATATATGTGTAGA+AGG 0.401632 2_4:+55834879 Msa0336430:three_prime_UTR
ACAATACACAATAGTCGAAA+TGG 0.401661 2_4:+55834390 Msa0336430:exon
AGTCGAAACACATTTGATCT+TGG 0.404166 2_4:+55834421 Msa0336430:three_prime_UTR
CAGGGTCACAAGGTGTGATT+AGG 0.404815 2_4:+55834614 Msa0336430:three_prime_UTR
CTTGTGACTCAATTCCTTCA+AGG 0.417393 2_4:+55834523 Msa0336430:three_prime_UTR
AGGGTGGTGAAGTTGGAAAA+TGG 0.423456 2_4:-55834005 None:intergenic
AAGGTTGGTTGGTTACATTA+GGG 0.425873 2_4:+55834898 Msa0336430:three_prime_UTR
CAAACTCTCTTTGCCAATCA+AGG 0.450028 2_4:+55834029 Msa0336430:CDS
TGCTGAATTTGCAAAATCAA+TGG 0.452311 2_4:+55834564 Msa0336430:three_prime_UTR
TGAATGTAATATTACCAGAT+AGG 0.455690 2_4:-55834076 None:intergenic
GCAAAATCAATGGAGAAAAT+GGG 0.466453 2_4:+55834574 Msa0336430:three_prime_UTR
GGACAAGTTAAAGTTAAGAC+AGG 0.485701 2_4:+55834595 Msa0336430:three_prime_UTR
CCTCTAACAGTAAGATTTGG+AGG 0.486565 2_4:-55833649 None:intergenic
TGGAGTCGTATCGAATTTGT+TGG 0.490287 2_4:+55833959 Msa0336430:CDS
ATAATATATGTGTAGAAGGT+TGG 0.490676 2_4:+55834883 Msa0336430:three_prime_UTR
TGTTGGTTTGTTGAGTTCAA+AGG 0.507278 2_4:-55833610 None:intergenic
CTTGTTGAAGCTGAATGCCC+TGG 0.535811 2_4:+55833700 Msa0336430:CDS
AGTCAAGTTGTCAAGAGAAG+AGG 0.538282 2_4:+55834451 Msa0336430:three_prime_UTR
TATATGTGTAGAAGGTTGGT+TGG 0.540580 2_4:+55834887 Msa0336430:three_prime_UTR
GTGAAGTTGGAAAATGGAGC+AGG 0.550766 2_4:-55833999 None:intergenic
ACATAATGTACCACCAAACC+AGG 0.555806 2_4:-55834792 None:intergenic
GAAAGTTCCAACAGGTAGAA+GGG 0.557568 2_4:+55833935 Msa0336430:intron
GTTCCAACAGGTAGAAGGGA+TGG 0.566917 2_4:+55833939 Msa0336430:intron
GATTGGCAAAGAGAGTTTGG+AGG 0.571052 2_4:-55834025 None:intergenic
ATTGGCAAAGAGAGTTTGGA+GGG 0.582534 2_4:-55834024 None:intergenic
GGCAAAGAGAGTTTGGAGGG+TGG 0.591559 2_4:-55834021 None:intergenic
GCATATTCACTATCAAGTGA+TGG 0.604475 2_4:-55834329 None:intergenic
ACAATAGTCGAAATGGACCC+CGG 0.608410 2_4:+55834397 Msa0336430:exon
AACTAATGTATTGAAATACA+AGG 0.615863 2_4:-55835016 None:intergenic
ATCCATTTAAGGATGCACCT+TGG 0.617866 2_4:-55834993 None:intergenic
ATGTAATATTACCAGATAGG+AGG 0.627130 2_4:-55834073 None:intergenic
CAGGGCATTCAGCTTCAACA+AGG 0.628010 2_4:-55833699 None:intergenic
AAAGTTAAGACAGGGTCACA+AGG 0.639191 2_4:+55834604 Msa0336430:three_prime_UTR
ATGAGAAGTTCTCTAAACCA+AGG 0.647882 2_4:+55834976 Msa0336430:three_prime_UTR
TGTTGAGACACAACATGACA+TGG 0.650318 2_4:-55834713 None:intergenic
CAAATGTGTTTCGACTTCCG+GGG 0.706421 2_4:-55834414 None:intergenic
GACAAGTTAAAGTTAAGACA+GGG 0.715537 2_4:+55834596 Msa0336430:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAATTTTAAGAACAAGT+GGG + chr2_4:55834745-55834764 Msa0336430:three_prime_UTR 15.0%
!!! TAATAATTTTAAGAACAAGT+GGG + chr2_4:55834745-55834764 Msa0336430:three_prime_UTR 15.0%
!! TTCCAGTAAAATTGTATAAA+CGG - chr2_4:55834295-55834314 None:intergenic 20.0%
!!! TTTATACAATTTTACTGGAA+AGG + chr2_4:55834295-55834314 Msa0336430:CDS 20.0%
!!! TTATACAATTTTACTGGAAA+GGG + chr2_4:55834296-55834315 Msa0336430:CDS 20.0%
!!! TTTATGTTGATTTGTGTTTT+TGG + chr2_4:55834671-55834690 Msa0336430:three_prime_UTR 20.0%
!!! TTATGTTGATTTGTGTTTTT+GGG + chr2_4:55834672-55834691 Msa0336430:three_prime_UTR 20.0%
!!! GTAATAATTTTAAGAACAAG+TGG + chr2_4:55834744-55834763 Msa0336430:three_prime_UTR 20.0%
!!! CAATTGTAATTTTTATTTCC+TGG + chr2_4:55834774-55834793 Msa0336430:three_prime_UTR 20.0%
!! AACTAATGTATTGAAATACA+AGG - chr2_4:55835019-55835038 None:intergenic 20.0%
!! TTCCAGTAAAATTGTATAAA+CGG - chr2_4:55834295-55834314 None:intergenic 20.0%
!!! TTTATACAATTTTACTGGAA+AGG + chr2_4:55834295-55834314 Msa0336430:CDS 20.0%
!!! TTATACAATTTTACTGGAAA+GGG + chr2_4:55834296-55834315 Msa0336430:CDS 20.0%
!!! TTTATGTTGATTTGTGTTTT+TGG + chr2_4:55834671-55834690 Msa0336430:three_prime_UTR 20.0%
!!! TTATGTTGATTTGTGTTTTT+GGG + chr2_4:55834672-55834691 Msa0336430:three_prime_UTR 20.0%
!!! GTAATAATTTTAAGAACAAG+TGG + chr2_4:55834744-55834763 Msa0336430:three_prime_UTR 20.0%
!!! CAATTGTAATTTTTATTTCC+TGG + chr2_4:55834774-55834793 Msa0336430:three_prime_UTR 20.0%
!! AACTAATGTATTGAAATACA+AGG - chr2_4:55835019-55835038 None:intergenic 20.0%
! ATTCTATCTTTAACAGACTA+AGG + chr2_4:55833792-55833811 Msa0336430:intron 25.0%
!! TTTTAAATCAAGTCCTTGAT+TGG - chr2_4:55834045-55834064 None:intergenic 25.0%
! TGAATGTAATATTACCAGAT+AGG - chr2_4:55834079-55834098 None:intergenic 25.0%
!!! GACCATGATTAAATTTTTTC+AGG + chr2_4:55834227-55834246 Msa0336430:intron 25.0%
! CACCTGAAAAAATTTAATCA+TGG - chr2_4:55834232-55834251 None:intergenic 25.0%
!! AACCGTTTATACAATTTTAC+TGG + chr2_4:55834290-55834309 Msa0336430:CDS 25.0%
!!! GTAATTTTTATTTCCTGGTT+TGG + chr2_4:55834779-55834798 Msa0336430:three_prime_UTR 25.0%
!!! ATATATTATTGACTCTGCTT+TGG - chr2_4:55834872-55834891 None:intergenic 25.0%
! GTCAATAATATATGTGTAGA+AGG + chr2_4:55834879-55834898 Msa0336430:three_prime_UTR 25.0%
! ATAATATATGTGTAGAAGGT+TGG + chr2_4:55834883-55834902 Msa0336430:three_prime_UTR 25.0%
! ATTCTATCTTTAACAGACTA+AGG + chr2_4:55833792-55833811 Msa0336430:intron 25.0%
!! TTTTAAATCAAGTCCTTGAT+TGG - chr2_4:55834045-55834064 None:intergenic 25.0%
! TGAATGTAATATTACCAGAT+AGG - chr2_4:55834079-55834098 None:intergenic 25.0%
!!! GACCATGATTAAATTTTTTC+AGG + chr2_4:55834227-55834246 Msa0336430:intron 25.0%
! CACCTGAAAAAATTTAATCA+TGG - chr2_4:55834232-55834251 None:intergenic 25.0%
!! AACCGTTTATACAATTTTAC+TGG + chr2_4:55834290-55834309 Msa0336430:CDS 25.0%
!!! GTAATTTTTATTTCCTGGTT+TGG + chr2_4:55834779-55834798 Msa0336430:three_prime_UTR 25.0%
!!! ATATATTATTGACTCTGCTT+TGG - chr2_4:55834872-55834891 None:intergenic 25.0%
! GTCAATAATATATGTGTAGA+AGG + chr2_4:55834879-55834898 Msa0336430:three_prime_UTR 25.0%
! ATAATATATGTGTAGAAGGT+TGG + chr2_4:55834883-55834902 Msa0336430:three_prime_UTR 25.0%
ATAGAATTGAGTACTTACTG+TGG - chr2_4:55833779-55833798 None:intergenic 30.0%
TTAAATAAGCCAATCCAAAC+AGG - chr2_4:55833818-55833837 None:intergenic 30.0%
AGCTTATCTACTGATACATT+TGG + chr2_4:55833882-55833901 Msa0336430:intron 30.0%
! ATTTGGTGATTTGTGATTTC+AGG + chr2_4:55833899-55833918 Msa0336430:intron 30.0%
! TTTGGTGATTTGTGATTTCA+GGG + chr2_4:55833900-55833919 Msa0336430:intron 30.0%
ATGTAATATTACCAGATAGG+AGG - chr2_4:55834076-55834095 None:intergenic 30.0%
TTTACCGACATAATTAGAGA+CGG + chr2_4:55834156-55834175 Msa0336430:intron 30.0%
! TTTTCCGTCTCTAATTATGT+CGG - chr2_4:55834163-55834182 None:intergenic 30.0%
TCTTACACTTGAATGTCTTT+AGG - chr2_4:55834361-55834380 None:intergenic 30.0%
ACAATACACAATAGTCGAAA+TGG + chr2_4:55834390-55834409 Msa0336430:exon 30.0%
TGCTGAATTTGCAAAATCAA+TGG + chr2_4:55834564-55834583 Msa0336430:three_prime_UTR 30.0%
TGCAAAATCAATGGAGAAAA+TGG + chr2_4:55834573-55834592 Msa0336430:three_prime_UTR 30.0%
GCAAAATCAATGGAGAAAAT+GGG + chr2_4:55834574-55834593 Msa0336430:three_prime_UTR 30.0%
GACAAGTTAAAGTTAAGACA+GGG + chr2_4:55834596-55834615 Msa0336430:three_prime_UTR 30.0%
!!! TTGATTTGTGTTTTTGGGTT+TGG + chr2_4:55834677-55834696 Msa0336430:three_prime_UTR 30.0%
!!! ATTTTTATTTCCTGGTTTGG+TGG + chr2_4:55834782-55834801 Msa0336430:three_prime_UTR 30.0%
GAAATACAAGGATCCATTTA+AGG - chr2_4:55835007-55835026 None:intergenic 30.0%
ATAGAATTGAGTACTTACTG+TGG - chr2_4:55833779-55833798 None:intergenic 30.0%
TTAAATAAGCCAATCCAAAC+AGG - chr2_4:55833818-55833837 None:intergenic 30.0%
AGCTTATCTACTGATACATT+TGG + chr2_4:55833882-55833901 Msa0336430:intron 30.0%
! ATTTGGTGATTTGTGATTTC+AGG + chr2_4:55833899-55833918 Msa0336430:intron 30.0%
! TTTGGTGATTTGTGATTTCA+GGG + chr2_4:55833900-55833919 Msa0336430:intron 30.0%
ATGTAATATTACCAGATAGG+AGG - chr2_4:55834076-55834095 None:intergenic 30.0%
TTTACCGACATAATTAGAGA+CGG + chr2_4:55834156-55834175 Msa0336430:intron 30.0%
! TTTTCCGTCTCTAATTATGT+CGG - chr2_4:55834163-55834182 None:intergenic 30.0%
TCTTACACTTGAATGTCTTT+AGG - chr2_4:55834361-55834380 None:intergenic 30.0%
ACAATACACAATAGTCGAAA+TGG + chr2_4:55834390-55834409 Msa0336430:exon 30.0%
TGCTGAATTTGCAAAATCAA+TGG + chr2_4:55834564-55834583 Msa0336430:three_prime_UTR 30.0%
TGCAAAATCAATGGAGAAAA+TGG + chr2_4:55834573-55834592 Msa0336430:three_prime_UTR 30.0%
GCAAAATCAATGGAGAAAAT+GGG + chr2_4:55834574-55834593 Msa0336430:three_prime_UTR 30.0%
GACAAGTTAAAGTTAAGACA+GGG + chr2_4:55834596-55834615 Msa0336430:three_prime_UTR 30.0%
!!! TTGATTTGTGTTTTTGGGTT+TGG + chr2_4:55834677-55834696 Msa0336430:three_prime_UTR 30.0%
!!! ATTTTTATTTCCTGGTTTGG+TGG + chr2_4:55834782-55834801 Msa0336430:three_prime_UTR 30.0%
GAAATACAAGGATCCATTTA+AGG - chr2_4:55835007-55835026 None:intergenic 30.0%
!! TGTTGGTTTGTTGAGTTCAA+AGG - chr2_4:55833613-55833632 None:intergenic 35.0%
!!! GAGCATTTTTTTCAGCTTGT+TGG - chr2_4:55833630-55833649 None:intergenic 35.0%
AAGCCTCTAACAGTAAGATT+TGG - chr2_4:55833655-55833674 None:intergenic 35.0%
GCATATTCACTATCAAGTGA+TGG - chr2_4:55834332-55834351 None:intergenic 35.0%
ATCAAATGTGTTTCGACTTC+CGG - chr2_4:55834419-55834438 None:intergenic 35.0%
AGTCGAAACACATTTGATCT+TGG + chr2_4:55834421-55834440 Msa0336430:three_prime_UTR 35.0%
!!! AATTTTCAAGTGAGCCTTGA+AGG - chr2_4:55834540-55834559 None:intergenic 35.0%
GGACAAGTTAAAGTTAAGAC+AGG + chr2_4:55834595-55834614 Msa0336430:three_prime_UTR 35.0%
! TATATGTGTAGAAGGTTGGT+TGG + chr2_4:55834887-55834906 Msa0336430:three_prime_UTR 35.0%
! AAGGTTGGTTGGTTACATTA+GGG + chr2_4:55834898-55834917 Msa0336430:three_prime_UTR 35.0%
ATGAGAAGTTCTCTAAACCA+AGG + chr2_4:55834976-55834995 Msa0336430:three_prime_UTR 35.0%
!! TGTTGGTTTGTTGAGTTCAA+AGG - chr2_4:55833613-55833632 None:intergenic 35.0%
!!! GAGCATTTTTTTCAGCTTGT+TGG - chr2_4:55833630-55833649 None:intergenic 35.0%
AAGCCTCTAACAGTAAGATT+TGG - chr2_4:55833655-55833674 None:intergenic 35.0%
GCATATTCACTATCAAGTGA+TGG - chr2_4:55834332-55834351 None:intergenic 35.0%
ATCAAATGTGTTTCGACTTC+CGG - chr2_4:55834419-55834438 None:intergenic 35.0%
AGTCGAAACACATTTGATCT+TGG + chr2_4:55834421-55834440 Msa0336430:three_prime_UTR 35.0%
!!! AATTTTCAAGTGAGCCTTGA+AGG - chr2_4:55834540-55834559 None:intergenic 35.0%
GGACAAGTTAAAGTTAAGAC+AGG + chr2_4:55834595-55834614 Msa0336430:three_prime_UTR 35.0%
! TATATGTGTAGAAGGTTGGT+TGG + chr2_4:55834887-55834906 Msa0336430:three_prime_UTR 35.0%
! AAGGTTGGTTGGTTACATTA+GGG + chr2_4:55834898-55834917 Msa0336430:three_prime_UTR 35.0%
ATGAGAAGTTCTCTAAACCA+AGG + chr2_4:55834976-55834995 Msa0336430:three_prime_UTR 35.0%
CCTCTAACAGTAAGATTTGG+AGG - chr2_4:55833652-55833671 None:intergenic 40.0%
CCTCCAAATCTTACTGTTAG+AGG + chr2_4:55833649-55833668 Msa0336430:CDS 40.0%
TTAACAGACTAAGGCCTGTT+TGG + chr2_4:55833801-55833820 Msa0336430:intron 40.0%
CCTGTTGGAACTTTCCAATA+TGG - chr2_4:55833930-55833949 None:intergenic 40.0%
CCATATTGGAAAGTTCCAAC+AGG + chr2_4:55833927-55833946 Msa0336430:intron 40.0%
GAAAGTTCCAACAGGTAGAA+GGG + chr2_4:55833935-55833954 Msa0336430:intron 40.0%
TGGAGTCGTATCGAATTTGT+TGG + chr2_4:55833959-55833978 Msa0336430:CDS 40.0%
ATTGGCAAAGAGAGTTTGGA+GGG - chr2_4:55834027-55834046 None:intergenic 40.0%
CTTGATTGGCAAAGAGAGTT+TGG - chr2_4:55834031-55834050 None:intergenic 40.0%
CAAACTCTCTTTGCCAATCA+AGG + chr2_4:55834029-55834048 Msa0336430:CDS 40.0%
AAAGACTTAGTCCTCCTATC+TGG + chr2_4:55834062-55834081 Msa0336430:CDS 40.0%
!!! TTTTCAGGTGCTCACACAAT+TGG + chr2_4:55834242-55834261 Msa0336430:intron 40.0%
TCAAATGTGTTTCGACTTCC+GGG - chr2_4:55834418-55834437 None:intergenic 40.0%
! AGTCAAGTTGTCAAGAGAAG+AGG + chr2_4:55834451-55834470 Msa0336430:three_prime_UTR 40.0%
CTTGTGACTCAATTCCTTCA+AGG + chr2_4:55834523-55834542 Msa0336430:three_prime_UTR 40.0%
AAAGTTAAGACAGGGTCACA+AGG + chr2_4:55834604-55834623 Msa0336430:three_prime_UTR 40.0%
TGTTGAGACACAACATGACA+TGG - chr2_4:55834716-55834735 None:intergenic 40.0%
ACATAATGTACCACCAAACC+AGG - chr2_4:55834795-55834814 None:intergenic 40.0%
! GAAGGTTGGTTGGTTACATT+AGG + chr2_4:55834897-55834916 Msa0336430:three_prime_UTR 40.0%
AACCAAGGTGCATCCTTAAA+TGG + chr2_4:55834991-55835010 Msa0336430:three_prime_UTR 40.0%
ATCCATTTAAGGATGCACCT+TGG - chr2_4:55834996-55835015 None:intergenic 40.0%
CCTCTAACAGTAAGATTTGG+AGG - chr2_4:55833652-55833671 None:intergenic 40.0%
CCTCCAAATCTTACTGTTAG+AGG + chr2_4:55833649-55833668 Msa0336430:CDS 40.0%
TTAACAGACTAAGGCCTGTT+TGG + chr2_4:55833801-55833820 Msa0336430:intron 40.0%
CCTGTTGGAACTTTCCAATA+TGG - chr2_4:55833930-55833949 None:intergenic 40.0%
CCATATTGGAAAGTTCCAAC+AGG + chr2_4:55833927-55833946 Msa0336430:intron 40.0%
GAAAGTTCCAACAGGTAGAA+GGG + chr2_4:55833935-55833954 Msa0336430:intron 40.0%
TGGAGTCGTATCGAATTTGT+TGG + chr2_4:55833959-55833978 Msa0336430:CDS 40.0%
ATTGGCAAAGAGAGTTTGGA+GGG - chr2_4:55834027-55834046 None:intergenic 40.0%
CTTGATTGGCAAAGAGAGTT+TGG - chr2_4:55834031-55834050 None:intergenic 40.0%
CAAACTCTCTTTGCCAATCA+AGG + chr2_4:55834029-55834048 Msa0336430:CDS 40.0%
AAAGACTTAGTCCTCCTATC+TGG + chr2_4:55834062-55834081 Msa0336430:CDS 40.0%
!!! TTTTCAGGTGCTCACACAAT+TGG + chr2_4:55834242-55834261 Msa0336430:intron 40.0%
TCAAATGTGTTTCGACTTCC+GGG - chr2_4:55834418-55834437 None:intergenic 40.0%
! AGTCAAGTTGTCAAGAGAAG+AGG + chr2_4:55834451-55834470 Msa0336430:three_prime_UTR 40.0%
CTTGTGACTCAATTCCTTCA+AGG + chr2_4:55834523-55834542 Msa0336430:three_prime_UTR 40.0%
AAAGTTAAGACAGGGTCACA+AGG + chr2_4:55834604-55834623 Msa0336430:three_prime_UTR 40.0%
TGTTGAGACACAACATGACA+TGG - chr2_4:55834716-55834735 None:intergenic 40.0%
ACATAATGTACCACCAAACC+AGG - chr2_4:55834795-55834814 None:intergenic 40.0%
! GAAGGTTGGTTGGTTACATT+AGG + chr2_4:55834897-55834916 Msa0336430:three_prime_UTR 40.0%
AACCAAGGTGCATCCTTAAA+TGG + chr2_4:55834991-55835010 Msa0336430:three_prime_UTR 40.0%
ATCCATTTAAGGATGCACCT+TGG - chr2_4:55834996-55835015 None:intergenic 40.0%
CAGCACAAGAAACAACACCA+GGG - chr2_4:55833720-55833739 None:intergenic 45.0%
TCAGCACAAGAAACAACACC+AGG - chr2_4:55833721-55833740 None:intergenic 45.0%
AGACTAAGGCCTGTTTGGAT+TGG + chr2_4:55833806-55833825 Msa0336430:intron 45.0%
! GGTGATTTGTGATTTCAGGG+TGG + chr2_4:55833903-55833922 Msa0336430:intron 45.0%
GATTTCAGGGTGGTCCATAT+TGG + chr2_4:55833913-55833932 Msa0336430:intron 45.0%
GGAAAGTTCCAACAGGTAGA+AGG + chr2_4:55833934-55833953 Msa0336430:intron 45.0%
GTGAAGTTGGAAAATGGAGC+AGG - chr2_4:55834002-55834021 None:intergenic 45.0%
AGGGTGGTGAAGTTGGAAAA+TGG - chr2_4:55834008-55834027 None:intergenic 45.0%
GATTGGCAAAGAGAGTTTGG+AGG - chr2_4:55834028-55834047 None:intergenic 45.0%
ACAATAGTCGAAATGGACCC+CGG + chr2_4:55834397-55834416 Msa0336430:exon 45.0%
CAAATGTGTTTCGACTTCCG+GGG - chr2_4:55834417-55834436 None:intergenic 45.0%
CAGCACAAGAAACAACACCA+GGG - chr2_4:55833720-55833739 None:intergenic 45.0%
TCAGCACAAGAAACAACACC+AGG - chr2_4:55833721-55833740 None:intergenic 45.0%
AGACTAAGGCCTGTTTGGAT+TGG + chr2_4:55833806-55833825 Msa0336430:intron 45.0%
! GGTGATTTGTGATTTCAGGG+TGG + chr2_4:55833903-55833922 Msa0336430:intron 45.0%
GATTTCAGGGTGGTCCATAT+TGG + chr2_4:55833913-55833932 Msa0336430:intron 45.0%
GGAAAGTTCCAACAGGTAGA+AGG + chr2_4:55833934-55833953 Msa0336430:intron 45.0%
GTGAAGTTGGAAAATGGAGC+AGG - chr2_4:55834002-55834021 None:intergenic 45.0%
AGGGTGGTGAAGTTGGAAAA+TGG - chr2_4:55834008-55834027 None:intergenic 45.0%
GATTGGCAAAGAGAGTTTGG+AGG - chr2_4:55834028-55834047 None:intergenic 45.0%
ACAATAGTCGAAATGGACCC+CGG + chr2_4:55834397-55834416 Msa0336430:exon 45.0%
CAAATGTGTTTCGACTTCCG+GGG - chr2_4:55834417-55834436 None:intergenic 45.0%
! CAGGGCATTCAGCTTCAACA+AGG - chr2_4:55833702-55833721 None:intergenic 50.0%
CTTGTTGAAGCTGAATGCCC+TGG + chr2_4:55833700-55833719 Msa0336430:CDS 50.0%
TGTGGCTGCAATAGAGTCTC+TGG - chr2_4:55833761-55833780 None:intergenic 50.0%
GTTCCAACAGGTAGAAGGGA+TGG + chr2_4:55833939-55833958 Msa0336430:intron 50.0%
ACTCCATCCCTTCTACCTGT+TGG - chr2_4:55833945-55833964 None:intergenic 50.0%
AGTTTGGAGGGTGGTGAAGT+TGG - chr2_4:55834015-55834034 None:intergenic 50.0%
GACGACGGTGCTTAATGCTA+AGG - chr2_4:55834109-55834128 None:intergenic 50.0%
TGAATTAGCGTGCACGACGA+CGG - chr2_4:55834124-55834143 None:intergenic 50.0%
CAGGGTCACAAGGTGTGATT+AGG + chr2_4:55834614-55834633 Msa0336430:three_prime_UTR 50.0%
! CAGGGCATTCAGCTTCAACA+AGG - chr2_4:55833702-55833721 None:intergenic 50.0%
CTTGTTGAAGCTGAATGCCC+TGG + chr2_4:55833700-55833719 Msa0336430:CDS 50.0%
TGTGGCTGCAATAGAGTCTC+TGG - chr2_4:55833761-55833780 None:intergenic 50.0%
GTTCCAACAGGTAGAAGGGA+TGG + chr2_4:55833939-55833958 Msa0336430:intron 50.0%
ACTCCATCCCTTCTACCTGT+TGG - chr2_4:55833945-55833964 None:intergenic 50.0%
AGTTTGGAGGGTGGTGAAGT+TGG - chr2_4:55834015-55834034 None:intergenic 50.0%
GACGACGGTGCTTAATGCTA+AGG - chr2_4:55834109-55834128 None:intergenic 50.0%
TGAATTAGCGTGCACGACGA+CGG - chr2_4:55834124-55834143 None:intergenic 50.0%
CAGGGTCACAAGGTGTGATT+AGG + chr2_4:55834614-55834633 Msa0336430:three_prime_UTR 50.0%
GGCAAAGAGAGTTTGGAGGG+TGG - chr2_4:55834024-55834043 None:intergenic 55.0%
GGCAAAGAGAGTTTGGAGGG+TGG - chr2_4:55834024-55834043 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 55833610 55835046 55833610 ID=Msa0336430;Name=Msa0336430
chr2_4 mRNA 55833610 55835046 55833610 ID=Msa0336430-mRNA-1;Parent=Msa0336430;Name=Msa0336430-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.5|0.33|1|0.5|0.33|3|643|133
chr2_4 exon 55833610 55833721 55833610 ID=Msa0336430-mRNA-1:exon:16978;Parent=Msa0336430-mRNA-1
chr2_4 exon 55833949 55834083 55833949 ID=Msa0336430-mRNA-1:exon:16979;Parent=Msa0336430-mRNA-1
chr2_4 exon 55834249 55835046 55834249 ID=Msa0336430-mRNA-1:exon:16980;Parent=Msa0336430-mRNA-1
chr2_4 CDS 55833610 55833721 55833610 ID=Msa0336430-mRNA-1:cds;Parent=Msa0336430-mRNA-1
chr2_4 CDS 55833949 55834083 55833949 ID=Msa0336430-mRNA-1:cds;Parent=Msa0336430-mRNA-1
chr2_4 CDS 55834249 55834403 55834249 ID=Msa0336430-mRNA-1:cds;Parent=Msa0336430-mRNA-1
chr2_4 three_prime_UTR 55834404 55835046 55834404 ID=Msa0336430-mRNA-1:three_prime_utr;Parent=Msa0336430-mRNA-1
Gene Sequence

>Msa0336430

CCTTTGAACTCAACAAACCAACAAGCTGAAAAAAATGCTCCTCCAAATCTTACTGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTAGAAGGGATGGAGTCGTATCGAATTTGTTGGAAGCAAATCAAAACATTCCTGCTCCATTTTCCAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTGATTTAAAAGACTTAGTCCTCCTATCTGGTGCTCACACAATTGGTATCTCACTTTGCACATCATTTTCAAACCGTTTATACAATTTTACTGGAAAGGGTGATCAAGATCCATCACTTGATAGTGAATATGCACAAAACCTAAAGACATTCAAGTGTAAGAACATCAATGACAATACACAATAG
Protein sequence

>Msa0336430

PLNSTNQQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGRRDGVVSNLLEANQNIPAPFSNFTTLQTLFANQGLDLKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDQDPSLDSEYAQNLKTFKCKNINDNTQ*