AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1042300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042300 MtrunA17_Chr7g0266061 95.211 355 16 1 1 354 1 355 0.0 678
Msa1042300 MtrunA17_Chr1g0178931 63.607 305 108 3 41 344 37 339 1.50e-150 427
Msa1042300 MtrunA17_Chr1g0178941 57.391 345 130 9 19 353 22 359 1.21e-135 390
Msa1042300 MtrunA17_Chr1g0198381 51.875 320 139 7 41 354 2 312 1.09e-113 333
Msa1042300 MtrunA17_Chr1g0198351 47.634 317 152 6 41 352 43 350 1.83e-103 308
Msa1042300 MtrunA17_Chr1g0198391 45.349 344 140 10 34 344 26 354 1.96e-90 275
Msa1042300 MtrunA17_Chr1g0178961 56.364 220 92 4 134 352 1 217 2.16e-85 257
Msa1042300 MtrunA17_Chr1g0198401 46.154 260 131 4 90 344 8 263 1.49e-73 229
Msa1042300 MtrunA17_Chr1g0178951 60.000 110 35 4 23 129 5 108 1.53e-35 125
Msa1042300 MtrunA17_Chr8g0344941 30.063 316 191 12 42 336 42 348 1.50e-34 130
Msa1042300 MtrunA17_Chr2g0301641 31.746 315 182 12 42 333 44 348 3.56e-34 129
Msa1042300 MtrunA17_Chr8g0349341 31.975 319 182 13 42 339 38 342 1.45e-31 122
Msa1042300 MtrunA17_Chr8g0349321 28.895 353 206 15 8 335 6 338 2.16e-31 121
Msa1042300 MtrunA17_Chr3g0131321 28.840 319 193 11 40 334 33 341 2.14e-30 119
Msa1042300 MtrunA17_Chr1g0156921 29.363 361 223 15 1 339 1 351 3.01e-29 115
Msa1042300 MtrunA17_Chr1g0198361 45.802 131 65 4 151 278 3 130 3.58e-29 111
Msa1042300 MtrunA17_Chr8g0344931 32.268 313 173 17 42 333 38 332 5.88e-29 115
Msa1042300 MtrunA17_Chr5g0420811 30.545 275 164 10 37 294 29 293 6.74e-29 114
Msa1042300 MtrunA17_Chr4g0017431 27.914 326 201 12 39 339 29 345 4.94e-28 112
Msa1042300 MtrunA17_Chr1g0182811 28.916 332 191 16 41 343 33 348 2.76e-27 110
Msa1042300 MtrunA17_Chr7g0275291 26.462 325 201 11 42 335 34 351 6.85e-27 109
Msa1042300 MtrunA17_Chr2g0294301 29.841 315 189 11 43 335 37 341 1.75e-26 108
Msa1042300 MtrunA17_Chr5g0438621 29.747 316 191 14 39 333 28 333 3.33e-26 107
Msa1042300 MtrunA17_Chr5g0438631 27.679 336 193 15 39 343 26 342 4.52e-26 107
Msa1042300 MtrunA17_Chr3g0077581 27.606 355 214 14 6 333 4 342 5.73e-26 107
Msa1042300 MtrunA17_Chr4g0046151 27.778 342 204 15 39 349 34 363 7.61e-26 106
Msa1042300 MtrunA17_Chr5g0437421 27.523 327 199 16 42 341 33 348 8.25e-26 106
Msa1042300 MtrunA17_Chr1g0189891 30.599 317 176 15 42 333 30 327 2.58e-25 105
Msa1042300 MtrunA17_Chr1g0189901 26.852 324 208 12 42 345 32 346 5.40e-25 103
Msa1042300 MtrunA17_Chr7g0275001 26.543 324 206 11 42 343 26 339 6.05e-25 103
Msa1042300 MtrunA17_Chr8g0349301 29.483 329 188 17 10 314 8 316 6.38e-25 103
Msa1042300 MtrunA17_Chr2g0283191 27.467 375 202 19 7 340 12 357 8.43e-25 103
Msa1042300 MtrunA17_Chr2g0285061 27.187 320 190 11 43 335 34 337 9.45e-25 103
Msa1042300 MtrunA17_Chr3g0099231 25.000 332 215 14 35 343 22 342 1.03e-24 103
Msa1042300 MtrunA17_Chr5g0432101 27.647 340 203 16 40 350 32 357 1.04e-24 103
Msa1042300 MtrunA17_Chr5g0405831 27.451 357 211 17 6 337 18 351 1.65e-24 102
Msa1042300 MtrunA17_Chr3g0120861 28.358 335 208 14 39 352 36 359 4.97e-24 101
Msa1042300 MtrunA17_Chr1g0159971 24.800 375 218 11 11 343 23 375 5.46e-24 101
Msa1042300 MtrunA17_Chr4g0068441 26.250 320 210 9 43 343 37 349 5.48e-24 101
Msa1042300 MtrunA17_Chr3g0099151 25.758 330 203 15 42 343 88 403 6.18e-24 102
Msa1042300 MtrunA17_Chr8g0374101 25.978 358 215 16 7 334 11 348 6.92e-24 101
Msa1042300 MtrunA17_Chr5g0396511 28.438 320 182 14 43 333 48 349 7.34e-24 101
Msa1042300 MtrunA17_Chr3g0105401 30.341 323 181 15 39 333 26 332 8.63e-24 100
Msa1042300 MtrunA17_Chr3g0085231 28.616 318 182 11 39 334 29 323 9.16e-24 100
Msa1042300 MtrunA17_Chr7g0275011 26.667 315 196 10 42 333 35 337 1.12e-23 100
Msa1042300 MtrunA17_Chr5g0434621 26.752 314 197 10 43 335 27 328 1.50e-23 99.8
Msa1042300 MtrunA17_Chr8g0371491 26.453 344 204 16 25 339 22 345 1.66e-23 99.8
Msa1042300 MtrunA17_Chr5g0405821 26.944 360 210 17 6 337 18 352 1.84e-23 99.8
Msa1042300 MtrunA17_Chr5g0438641 29.338 317 191 13 39 333 30 335 2.04e-23 99.8
Msa1042300 MtrunA17_Chr3g0099161 25.076 327 208 14 42 343 93 407 2.09e-23 100
Msa1042300 MtrunA17_Chr1g0156901 26.997 363 220 17 3 343 19 358 2.74e-23 99.4
Msa1042300 MtrunA17_Chr7g0275021 26.790 377 221 20 3 349 7 358 4.93e-23 98.6
Msa1042300 MtrunA17_Chr3g0086641 27.171 357 203 15 7 335 15 342 5.43e-23 98.6
Msa1042300 MtrunA17_Chr1g0160031 24.800 375 220 13 7 343 15 365 7.63e-23 98.2
Msa1042300 MtrunA17_Chr2g0294311 28.571 322 192 15 42 334 33 345 8.32e-23 98.2
Msa1042300 MtrunA17_Chr1g0156911 27.451 357 223 16 1 336 1 342 8.67e-23 97.8
Msa1042300 MtrunA17_Chr1g0156891 25.348 359 225 13 6 343 16 352 1.35e-22 97.4
Msa1042300 MtrunA17_Chr4g0008851 24.595 370 223 15 1 343 7 347 2.70e-22 96.7
Msa1042300 MtrunA17_Chr7g0254461 25.664 339 208 10 42 343 44 375 2.98e-22 96.7
Msa1042300 MtrunA17_Chr6g0457921 26.393 341 202 16 34 343 21 343 4.21e-22 95.9
Msa1042300 MtrunA17_Chr7g0274991 24.465 327 212 10 42 345 34 348 4.66e-22 95.9
Msa1042300 MtrunA17_Chr8g0349331 28.779 344 184 16 8 334 6 305 5.61e-22 95.1
Msa1042300 MtrunA17_Chr2g0285001 26.062 353 208 17 10 337 9 333 5.70e-22 95.9
Msa1042300 MtrunA17_Chr3g0092131 26.006 323 206 12 43 343 25 336 6.09e-22 95.5
Msa1042300 MtrunA17_Chr1g0159981 25.936 374 219 13 7 343 22 374 8.91e-22 95.5
Msa1042300 MtrunA17_Chr3g0142921 26.852 324 204 12 42 343 37 349 1.04e-21 94.7
Msa1042300 MtrunA17_Chr1g0156931 26.946 334 209 16 39 349 39 360 1.17e-21 94.7
Msa1042300 MtrunA17_Chr1g0157001 28.391 317 188 12 46 338 41 342 2.33e-21 94.0
Msa1042300 MtrunA17_Chr1g0189931 27.301 326 200 13 42 343 33 345 2.71e-21 93.6
Msa1042300 MtrunA17_Chr8g0347751 26.163 344 193 15 35 335 33 358 3.39e-21 93.6
Msa1042300 MtrunA17_Chr4g0060811 25.466 322 209 11 43 343 29 340 4.11e-21 93.2
Msa1042300 MtrunA17_Chr3g0077571 25.568 352 211 12 6 334 6 329 4.32e-21 93.2
Msa1042300 MtrunA17_Chr2g0320671 26.970 330 206 11 39 345 28 345 1.10e-20 91.7
Msa1042300 MtrunA17_Chr8g0341001 26.220 328 212 13 39 345 30 348 1.54e-20 91.3
Msa1042300 MtrunA17_Chr1g0159991 26.525 377 213 14 7 343 12 364 1.60e-20 91.7
Msa1042300 MtrunA17_Chr2g0283481 24.096 332 219 9 40 343 46 372 5.46e-20 90.5
Msa1042300 MtrunA17_Chr1g0198411 77.358 53 10 1 41 93 32 82 5.82e-20 83.6
Msa1042300 MtrunA17_Chr3g0112821 26.284 331 202 14 42 343 31 348 6.10e-20 89.7
Msa1042300 MtrunA17_Chr2g0330781 26.426 333 215 12 34 345 24 347 7.81e-20 89.4
Msa1042300 MtrunA17_Chr2g0283511 25.382 327 211 10 46 343 36 358 1.29e-19 89.0
Msa1042300 MtrunA17_Chr8g0381581 24.047 341 210 10 42 343 41 371 1.62e-19 89.0
Msa1042300 MtrunA17_Chr4g0057991 23.547 344 221 10 41 354 39 370 3.62e-19 87.8
Msa1042300 MtrunA17_Chr8g0380041 27.302 315 195 13 43 335 33 335 3.98e-19 87.4
Msa1042300 MtrunA17_Chr4g0027521 26.814 317 204 13 39 334 25 334 5.74e-19 87.0
Msa1042300 MtrunA17_Chr1g0160011 25.067 375 220 14 7 343 15 366 9.17e-19 86.7
Msa1042300 MtrunA17_Chr3g0093031 25.970 335 203 14 42 343 31 353 1.36e-18 85.9
Msa1042300 MtrunA17_Chr7g0271551 25.000 320 206 9 42 338 37 345 2.90e-18 85.1
Msa1042300 MtrunA17_Chr7g0226911 24.403 377 235 14 6 343 3 368 5.65e-18 84.3
Msa1042300 MtrunA17_Chr3g0142941 27.134 328 199 17 39 343 45 355 1.02e-17 83.6
Msa1042300 MtrunA17_Chr8g0380031 28.049 328 185 15 39 343 82 381 1.31e-17 83.6
Msa1042300 MtrunA17_Chr8g0370951 27.528 356 204 18 6 333 10 339 1.43e-17 82.8
Msa1042300 MtrunA17_Chr2g0283501 22.796 329 212 9 40 335 30 349 1.80e-17 82.8
Msa1042300 MtrunA17_Chr2g0283531 24.695 328 218 8 42 343 32 356 2.04e-17 82.4
Msa1042300 MtrunA17_Chr2g0301581 25.223 337 199 13 33 339 26 339 4.98e-17 81.3
Msa1042300 MtrunA17_Chr7g0215961 27.358 318 177 14 42 333 34 323 5.07e-17 81.3
Msa1042300 MtrunA17_Chr7g0226941 26.100 341 209 14 42 348 34 365 1.25e-16 80.5
Msa1042300 MtrunA17_Chr3g0104821 25.816 337 204 15 42 343 45 370 1.75e-16 80.1
Msa1042300 MtrunA17_Chr8g0371481 25.816 337 213 16 30 343 33 355 2.12e-16 79.3
Msa1042300 MtrunA17_Chr0c01g0489581 27.322 366 209 19 8 343 3 341 2.33e-16 79.3
Msa1042300 MtrunA17_Chr0c01g0489571 27.322 366 209 19 8 343 3 341 2.51e-16 79.3
Msa1042300 MtrunA17_Chr1g0160101 21.925 374 240 11 6 343 14 371 3.22e-16 79.3
Msa1042300 MtrunA17_Chr2g0317271 27.576 330 192 17 42 343 31 341 3.59e-16 79.0
Msa1042300 MtrunA17_Chr8g0371471 24.926 337 215 16 30 343 33 354 8.28e-16 77.8
Msa1042300 MtrunA17_Chr2g0284921 25.868 317 197 12 39 334 32 331 2.81e-15 76.3
Msa1042300 MtrunA17_Chr6g0450711 22.561 328 223 10 42 343 123 445 7.54e-15 75.5
Msa1042300 MtrunA17_Chr3g0112691 25.000 332 200 15 42 339 31 347 2.48e-14 73.6
Msa1042300 MtrunA17_Chr8g0352901 21.846 325 218 10 42 335 29 348 4.47e-14 72.8
Msa1042300 MtrunA17_Chr8g0370981 26.897 290 186 12 27 294 29 314 4.52e-14 72.8
Msa1042300 MtrunA17_Chr2g0284991 23.562 365 205 17 10 339 9 334 4.53e-14 72.8
Msa1042300 MtrunA17_Chr2g0284951 23.919 347 213 12 10 334 9 326 1.79e-13 70.9
Msa1042300 MtrunA17_Chr6g0450701 23.053 321 214 10 42 335 40 354 1.50e-12 68.2
Msa1042300 MtrunA17_Chr6g0450731 24.545 330 203 15 42 343 34 345 2.35e-12 67.4
Msa1042300 MtrunA17_Chr1g0189921 36.937 111 57 4 41 147 31 132 4.52e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042300 AT5G03610.1 52.464 345 155 5 6 344 8 349 1.06e-125 365
Msa1042300 AT3G09930.2 49.541 327 154 7 25 343 22 345 3.28e-114 336
Msa1042300 AT3G09930.1 49.541 327 154 7 25 343 22 345 3.28e-114 336
Msa1042300 AT5G03600.1 42.122 311 167 7 37 343 10 311 5.58e-83 255
Msa1042300 AT5G03600.2 42.122 311 167 7 37 343 45 346 1.63e-82 255
Msa1042300 AT2G36325.1 41.479 311 169 7 40 343 46 350 2.20e-78 244
Msa1042300 AT5G03590.3 35.640 289 139 8 60 343 5 251 8.03e-55 181
Msa1042300 AT5G03590.1 31.142 289 121 9 60 343 5 220 4.88e-42 146
Msa1042300 AT5G03590.2 45.161 155 81 4 41 192 35 188 1.47e-34 126
Msa1042300 AT1G53920.1 29.429 350 223 12 9 341 17 359 3.55e-34 130
Msa1042300 AT1G20130.1 28.779 344 204 15 35 349 198 529 9.64e-30 119
Msa1042300 AT1G20130.2 28.779 344 204 15 35 349 178 509 1.00e-29 119
Msa1042300 AT1G58430.1 29.787 329 190 15 42 343 36 350 1.22e-28 114
Msa1042300 AT5G42170.1 27.913 369 222 18 7 343 4 360 2.57e-28 114
Msa1042300 AT2G31540.1 30.887 327 189 16 42 343 36 350 2.94e-28 113
Msa1042300 AT5G41890.1 27.273 319 203 12 43 335 33 348 3.46e-28 113
Msa1042300 AT1G59406.1 29.609 358 207 15 6 343 8 340 3.55e-28 113
Msa1042300 AT1G59030.1 29.609 358 207 15 6 343 8 340 3.55e-28 113
Msa1042300 AT1G58725.1 29.609 358 207 15 6 343 8 340 3.55e-28 113
Msa1042300 AT1G20120.1 29.762 336 200 15 42 354 79 401 9.03e-28 112
Msa1042300 AT5G45960.1 28.045 353 204 16 23 344 32 365 1.58e-27 111
Msa1042300 AT2G30310.1 29.179 329 188 16 42 341 35 347 2.19e-27 110
Msa1042300 AT2G40250.1 27.356 329 198 13 39 339 34 349 6.93e-27 109
Msa1042300 AT5G18430.1 28.940 349 195 15 11 333 12 333 7.03e-27 109
Msa1042300 AT3G14820.1 28.659 328 209 13 32 343 23 341 3.32e-26 107
Msa1042300 AT2G30220.1 28.571 329 190 16 42 341 34 346 4.10e-26 107
Msa1042300 AT1G58520.3 28.746 327 190 14 39 343 28 333 5.23e-26 107
Msa1042300 AT1G58525.1 28.746 327 190 14 39 343 28 333 5.23e-26 107
Msa1042300 AT1G75900.1 28.135 327 201 15 39 343 41 355 6.09e-26 107
Msa1042300 AT1G75930.1 26.875 320 197 11 40 339 28 330 6.11e-26 106
Msa1042300 AT1G33811.1 28.135 327 187 13 39 333 32 342 6.22e-26 107
Msa1042300 AT2G03980.2 27.796 313 193 14 42 333 44 344 8.90e-26 106
Msa1042300 AT2G03980.3 27.796 313 193 14 42 333 44 344 8.90e-26 106
Msa1042300 AT2G03980.1 27.796 313 193 14 42 333 44 344 8.90e-26 106
Msa1042300 AT2G03980.4 27.796 313 193 14 42 333 44 344 8.90e-26 106
Msa1042300 AT5G08460.1 27.070 314 202 11 42 334 50 357 9.79e-26 107
Msa1042300 AT3G50400.1 25.816 337 213 12 35 343 28 355 1.41e-25 106
Msa1042300 AT2G23540.1 26.016 369 211 16 4 334 15 359 2.13e-25 105
Msa1042300 AT2G24560.1 29.268 328 193 16 42 343 35 349 2.19e-25 105
Msa1042300 AT1G20135.1 29.358 327 176 13 40 339 28 326 2.80e-25 104
Msa1042300 AT1G75920.2 27.778 324 193 13 42 343 30 334 2.91e-25 104
Msa1042300 AT4G10950.2 28.125 320 193 12 39 334 69 375 3.28e-25 105
Msa1042300 AT1G75890.3 27.950 322 202 12 42 342 77 389 4.23e-25 105
Msa1042300 AT1G75890.2 27.950 322 202 12 42 342 48 360 4.35e-25 104
Msa1042300 AT5G33370.1 26.741 359 212 16 10 343 11 343 9.07e-25 103
Msa1042300 AT4G01130.1 25.507 345 212 11 34 339 22 360 1.10e-24 103
Msa1042300 AT1G75880.2 26.611 357 229 12 7 343 22 365 1.68e-24 103
Msa1042300 AT1G73610.1 26.462 359 209 12 3 339 6 331 1.78e-24 102
Msa1042300 AT1G54030.1 27.575 301 190 11 42 333 53 334 1.96e-24 103
Msa1042300 AT3G14220.1 28.481 316 194 14 42 341 33 332 1.97e-24 102
Msa1042300 AT1G54020.2 28.736 348 194 18 10 338 13 325 3.75e-24 102
Msa1042300 AT1G75880.1 26.536 358 229 12 7 343 22 366 4.79e-24 102
Msa1042300 AT3G48460.1 26.331 338 191 15 36 334 33 351 5.78e-24 102
Msa1042300 AT1G06990.1 26.687 326 195 14 42 339 38 347 9.48e-24 100
Msa1042300 AT4G28780.1 27.198 364 216 16 6 343 4 344 1.16e-23 100
Msa1042300 AT3G14225.2 28.135 327 196 12 40 339 36 350 2.67e-23 99.8
Msa1042300 AT1G75890.1 26.866 335 202 12 42 342 48 373 3.51e-23 99.8
Msa1042300 AT1G71250.1 25.364 343 219 13 13 333 17 344 3.80e-23 99.4
Msa1042300 AT4G10950.1 27.692 325 184 14 39 334 69 371 4.58e-23 99.8
Msa1042300 AT1G75910.1 27.134 328 191 13 42 343 29 334 4.91e-23 98.6
Msa1042300 AT5G63170.1 29.042 334 171 15 36 336 22 322 6.24e-23 98.2
Msa1042300 AT1G20132.1 26.415 318 205 13 36 333 56 364 6.92e-23 99.0
Msa1042300 AT5G37690.1 25.000 312 205 10 43 335 29 330 7.07e-23 98.6
Msa1042300 AT1G54010.1 26.727 333 216 13 11 333 14 328 8.26e-23 98.6
Msa1042300 AT3G04290.1 26.243 362 214 15 6 343 10 342 9.24e-23 98.2
Msa1042300 AT3G14225.1 27.795 331 196 12 40 339 36 354 1.06e-22 98.2
Msa1042300 AT5G33370.2 29.658 263 161 12 42 284 31 289 1.27e-22 97.4
Msa1042300 AT5G15720.1 27.492 331 196 13 32 333 20 335 2.02e-22 97.4
Msa1042300 AT5G45950.1 25.490 357 234 13 6 342 2 346 2.33e-22 97.1
Msa1042300 AT1G28600.1 26.525 377 213 16 7 343 4 356 2.99e-22 97.1
Msa1042300 AT2G27360.1 24.706 340 207 10 37 339 29 356 3.96e-22 96.7
Msa1042300 AT1G28640.1 25.348 359 223 11 7 334 8 352 4.16e-22 96.7
Msa1042300 AT1G71691.2 27.988 343 208 14 17 333 25 354 4.36e-22 96.7
Msa1042300 AT2G04570.1 27.711 332 197 17 39 343 26 341 4.69e-22 95.9
Msa1042300 AT1G23500.1 26.935 323 201 9 38 343 32 336 4.72e-22 95.9
Msa1042300 AT3G43570.1 25.915 355 198 13 8 343 3 311 4.91e-22 95.5
Msa1042300 AT5G45910.1 28.144 334 205 10 42 343 31 361 6.09e-22 95.9
Msa1042300 AT1G75920.4 26.490 302 185 12 60 343 24 306 8.78e-22 94.7
Msa1042300 AT3G53100.1 25.237 317 206 13 39 334 27 333 9.51e-22 95.1
Msa1042300 AT1G75920.1 26.549 339 193 14 42 343 25 344 1.36e-21 94.7
Msa1042300 AT1G29670.1 26.163 344 215 15 11 334 10 334 3.13e-21 94.0
Msa1042300 AT2G19060.1 27.184 309 194 10 43 335 32 325 6.69e-21 92.8
Msa1042300 AT1G71120.1 25.301 332 220 9 39 349 29 353 6.87e-21 92.8
Msa1042300 AT1G29660.1 26.649 379 198 19 7 344 10 349 8.35e-21 92.8
Msa1042300 AT4G26790.1 27.358 318 190 16 42 333 30 332 8.98e-21 92.4
Msa1042300 AT4G26790.2 27.358 318 190 16 42 333 30 332 8.98e-21 92.4
Msa1042300 AT1G29670.2 26.087 345 216 15 11 335 78 403 1.23e-20 92.8
Msa1042300 AT1G67830.1 24.556 338 212 10 42 343 31 361 1.59e-20 92.0
Msa1042300 AT1G54000.1 25.602 332 221 12 11 333 14 328 1.63e-20 92.0
Msa1042300 AT1G56670.1 25.543 368 227 10 3 346 14 358 1.63e-20 92.0
Msa1042300 AT2G24560.2 31.136 273 158 14 42 290 35 301 2.56e-20 90.5
Msa1042300 AT2G42990.1 27.273 319 195 16 39 333 26 331 2.82e-20 90.9
Msa1042300 AT5G40990.1 27.329 322 193 14 40 333 36 344 3.18e-20 91.3
Msa1042300 AT1G28650.1 24.346 382 216 15 7 343 10 363 3.71e-20 90.9
Msa1042300 AT3G14210.1 28.115 313 185 15 42 333 37 330 3.90e-20 91.3
Msa1042300 AT1G74460.1 25.697 323 207 11 43 343 25 336 4.05e-20 90.9
Msa1042300 AT5G22810.1 26.769 325 196 12 39 335 32 342 4.07e-20 90.5
Msa1042300 AT3G16370.1 27.103 321 198 11 39 335 28 336 5.37e-20 90.1
Msa1042300 AT1G28570.1 24.011 354 230 11 12 337 12 354 5.97e-20 90.5
Msa1042300 AT1G54030.2 28.163 245 158 9 42 280 53 285 9.58e-20 89.0
Msa1042300 AT1G53940.2 28.483 323 188 15 40 333 38 346 2.34e-19 88.6
Msa1042300 AT3G43550.1 29.699 266 159 11 39 284 28 285 3.18e-19 87.0
Msa1042300 AT4G18970.1 25.938 320 192 11 43 334 30 332 4.67e-19 87.8
Msa1042300 AT4G18970.2 25.938 320 192 11 43 334 30 332 7.10e-19 87.4
Msa1042300 AT1G28590.1 26.087 345 187 14 45 343 40 362 8.35e-19 87.4
Msa1042300 AT1G28670.1 24.044 366 230 11 7 339 8 358 9.60e-19 87.0
Msa1042300 AT1G28660.2 24.862 362 226 11 7 337 8 354 9.63e-19 87.0
Msa1042300 AT5G03820.1 27.381 336 199 13 39 345 31 350 1.70e-18 85.9
Msa1042300 AT5G03820.2 27.027 333 204 12 39 345 59 378 3.17e-18 85.5
Msa1042300 AT5G15720.2 28.369 282 163 11 32 284 20 291 3.37e-18 84.3
Msa1042300 AT5G45670.1 26.168 321 190 13 43 334 31 333 3.48e-18 85.1
Msa1042300 AT1G71691.3 28.571 294 176 11 17 284 25 310 4.08e-18 84.3
Msa1042300 AT2G19010.1 26.861 309 193 13 42 334 31 322 6.16e-18 84.3
Msa1042300 AT5G03810.1 25.526 333 208 11 39 345 28 346 7.23e-18 84.0
Msa1042300 AT1G31550.2 23.988 346 208 10 37 343 32 361 7.60e-18 84.3
Msa1042300 AT5G37690.2 24.038 312 200 11 43 335 29 322 8.44e-18 84.0
Msa1042300 AT1G28660.1 25.000 364 224 12 7 337 8 355 9.82e-18 84.0
Msa1042300 AT1G28610.2 23.324 343 214 12 37 343 27 356 1.00e-17 84.0
Msa1042300 AT2G19010.2 26.861 309 193 13 42 334 61 352 1.37e-17 83.6
Msa1042300 AT1G28580.1 23.839 323 210 9 45 337 41 357 5.40e-17 82.0
Msa1042300 AT5G55050.1 25.150 334 204 16 39 341 37 355 6.79e-17 81.6
Msa1042300 AT4G01130.2 25.177 282 174 9 34 284 22 297 1.35e-16 80.1
Msa1042300 AT1G09390.1 23.989 371 235 10 6 353 11 357 2.82e-16 79.7
Msa1042300 AT1G31550.1 24.566 346 203 12 37 343 32 358 3.10e-16 79.7
Msa1042300 AT2G19050.1 25.246 305 203 8 43 335 33 324 5.10e-16 78.6
Msa1042300 AT4G30140.1 26.471 306 192 11 43 333 35 322 5.10e-16 78.6
Msa1042300 AT1G56670.2 27.099 262 159 6 3 246 14 261 8.67e-16 77.4
Msa1042300 AT2G04020.2 24.290 317 157 11 42 333 44 302 1.98e-15 76.6
Msa1042300 AT2G04020.1 27.805 205 121 7 42 226 44 241 2.83e-15 75.5
Msa1042300 AT3G26430.1 23.747 379 226 16 6 343 6 362 7.66e-15 75.5
Msa1042300 AT3G27950.1 25.683 366 223 17 8 343 8 354 1.59e-14 74.3
Msa1042300 AT3G62280.1 26.154 325 189 16 42 335 37 341 1.75e-14 74.3
Msa1042300 AT2G19050.2 29.949 197 120 7 43 225 33 225 8.03e-14 71.2
Msa1042300 AT4G16230.1 27.411 197 123 6 43 220 32 227 4.37e-12 65.9
Msa1042300 AT3G62280.2 29.146 199 116 9 42 224 37 226 7.86e-12 65.9
Msa1042300 AT1G54790.3 23.077 338 209 13 45 343 36 361 6.35e-11 63.5

Find 97 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTAAATCTGCTTTCTTT+TGG 0.201805 7_1:-80131585 Msa1042300:CDS
ATAACGATTTCAACTGCTTT+TGG 0.232228 7_1:-80131358 Msa1042300:three_prime_UTR
ATGCCACAACATTTGAAATA+TGG 0.240247 7_1:-80133323 Msa1042300:CDS
GAATAATGTTAAGAAATATT+TGG 0.268269 7_1:-80131617 Msa1042300:CDS
TCCCAAAAGAAAGCAGATTT+AGG 0.287655 7_1:+80131583 None:intergenic
ATCAATTTCCTCAGGCTGTA+TGG 0.326225 7_1:+80133344 None:intergenic
AACTTTGCCTTTGGTGGTAC+TGG 0.331428 7_1:-80133296 Msa1042300:CDS
TGATCTGGGTTGTCATGTTT+GGG 0.333846 7_1:+80133249 None:intergenic
CCTTATGGTATCACCTTTCC+CGG 0.333994 7_1:-80136551 Msa1042300:CDS
TTGATCTGGGTTGTCATGTT+TGG 0.334896 7_1:+80133248 None:intergenic
TTATGATCATGATTATGTTT+TGG 0.340086 7_1:+80136659 None:intergenic
AAAGAGGTTTGGCTAATTCA+TGG 0.344372 7_1:-80136580 Msa1042300:CDS
TACCTGAGAGATGTAGAATA+AGG 0.354309 7_1:+80136798 None:intergenic
GAAACGGCCGGCAGGTTTGC+CGG 0.357885 7_1:+80136532 None:intergenic
GTATCAAAATTGTTTGTGTT+TGG 0.368114 7_1:-80136632 Msa1042300:CDS
TGTGAATGAACTATATATAA+TGG 0.373601 7_1:+80136979 None:intergenic
TCCATCTACACACAACATTC+AGG 0.377981 7_1:-80131701 Msa1042300:CDS
TGATTTCACTTTCAAATACT+TGG 0.383835 7_1:+80133373 None:intergenic
AAAACATAATCATGATCATA+AGG 0.389545 7_1:-80136657 Msa1042300:CDS
TGGGTTGTCATGTTTGGGCC+TGG 0.398569 7_1:+80133254 None:intergenic
ATATAGTTCATTCACACTAT+AGG 0.403807 7_1:-80136972 Msa1042300:five_prime_UTR
TCCTGAATGTTGTGTGTAGA+TGG 0.406938 7_1:+80131700 None:intergenic
TTGGTTCATCCTACGGAGGC+AGG 0.408520 7_1:-80131559 Msa1042300:CDS
AATTCATGGAAACATCCTTA+TGG 0.412685 7_1:-80136566 Msa1042300:CDS
CATTATTCGCATCAAAGGAT+TGG 0.422733 7_1:-80131953 Msa1042300:CDS
TTCACTTTCCACACTCATCA+TGG 0.427477 7_1:-80136852 Msa1042300:exon
ATTATTCGCATCAAAGGATT+GGG 0.434736 7_1:-80131952 Msa1042300:CDS
TTCCTTATTCTACATCTCTC+AGG 0.436950 7_1:-80136800 Msa1042300:intron
GTGAATAATCTACAACCAAT+TGG 0.439560 7_1:-80131913 Msa1042300:CDS
GTTGCTCTTGTCTCTGTCGC+TGG 0.439755 7_1:-80133167 Msa1042300:CDS
AAACGGCCGGCAGGTTTGCC+GGG 0.440962 7_1:+80136533 None:intergenic
TATGGAATGAACTTTGCCTT+TGG 0.442540 7_1:-80133305 Msa1042300:CDS
AAATAGTGCCAAGAAAAGAT+TGG 0.451598 7_1:-80131471 Msa1042300:three_prime_UTR
TTGGGATTTGGTTCATCCTA+CGG 0.473098 7_1:-80131566 Msa1042300:CDS
ACTCGTTACACGGTCACAAA+TGG 0.476614 7_1:-80133134 Msa1042300:CDS
GAAAATAAGAGAGAGGAGGA+AGG 0.477524 7_1:+80136820 None:intergenic
AATCTTTGTGATTGTGATGA+AGG 0.480818 7_1:+80136921 None:intergenic
ACCTTTCCCGGCAAACCTGC+CGG 0.480955 7_1:-80136539 Msa1042300:CDS
AAACATAATCATGATCATAA+GGG 0.483125 7_1:-80136656 Msa1042300:CDS
ATCAATGAAGCTATGAATGA+TGG 0.485195 7_1:+80131994 None:intergenic
TAAAGATTAAGAACTAAGAA+AGG 0.489601 7_1:+80131751 None:intergenic
GAGGATGAAGCTGTCATTGA+AGG 0.496487 7_1:+80131883 None:intergenic
GCCGGCAGGTTTGCCGGGAA+AGG 0.498713 7_1:+80136538 None:intergenic
ATTCCATATTTCAAATGTTG+TGG 0.498820 7_1:+80133320 None:intergenic
ATATTTATTTACAGGACAAA+GGG 0.499237 7_1:-80136705 Msa1042300:intron
TCAATTTCCTCAGGCTGTAT+GGG 0.499873 7_1:+80133345 None:intergenic
CAATGAATTTAACAAACAAA+AGG 0.501199 7_1:+80131400 None:intergenic
ACTAGTCGTGAATCTGTTGA+AGG 0.504599 7_1:+80131497 None:intergenic
CCGGGAAAGGTGATACCATA+AGG 0.507059 7_1:+80136551 None:intergenic
AAAATAAGAGAGAGGAGGAA+GGG 0.507765 7_1:+80136821 None:intergenic
AGGTAACATCAAAAGAGGTT+TGG 0.515214 7_1:-80136591 Msa1042300:CDS
TTGTTGGTTCAATTTGGTCA+CGG 0.515797 7_1:+80131792 None:intergenic
ACAAACATTATTCGCATCAA+AGG 0.516662 7_1:-80131958 Msa1042300:CDS
CTTGAGTTAAGAGTGTGTTA+TGG 0.516810 7_1:+80131815 None:intergenic
GGAATGAACTTTGCCTTTGG+TGG 0.526847 7_1:-80133302 Msa1042300:CDS
TATATTTATTTACAGGACAA+AGG 0.528173 7_1:-80136706 Msa1042300:intron
GTTGTGGCATCAATTTCCTC+AGG 0.528177 7_1:+80133336 None:intergenic
ATTGAAGGTAGACATCCAAT+TGG 0.532120 7_1:+80131898 None:intergenic
GGACTCTTCCGTCGGAGAAA+CGG 0.534235 7_1:+80136516 None:intergenic
TTCCTCAGGCTGTATGGGAC+TGG 0.535981 7_1:+80133350 None:intergenic
CCGTCGGAGAAACGGCCGGC+AGG 0.537870 7_1:+80136524 None:intergenic
GGTCACAAATGGCTCGGTTG+AGG 0.538864 7_1:-80133123 Msa1042300:intron
TTCGTTGCATTGTTTGAATG+AGG 0.541281 7_1:+80131864 None:intergenic
TGGCTACTTTGTTTGAGAGA+GGG 0.543968 7_1:+80136885 None:intergenic
AACTGAATTATTGATTTCTG+AGG 0.546149 7_1:+80133187 None:intergenic
GAATAAGGAAAATAAGAGAG+AGG 0.559792 7_1:+80136813 None:intergenic
GTGTTTGATACGTTGAATCC+AGG 0.559978 7_1:-80133272 Msa1042300:CDS
GTGGCTACTTTGTTTGAGAG+AGG 0.560715 7_1:+80136884 None:intergenic
TCTTTACGATAGTTTCATGT+CGG 0.562308 7_1:-80131734 Msa1042300:CDS
CCTGCCGGCCGTTTCTCCGA+CGG 0.566677 7_1:-80136524 Msa1042300:CDS
AAACGACTACACTCGTTACA+CGG 0.570553 7_1:-80133144 Msa1042300:CDS
GACACAGGTAACATCAAAAG+AGG 0.575949 7_1:-80136596 Msa1042300:CDS
ATGAGTGTGGAAAGTGAATG+AGG 0.584457 7_1:+80136857 None:intergenic
GGAAAGTGAATGAGGGATAG+TGG 0.587950 7_1:+80136865 None:intergenic
GCATGCCACCCTGCCTCCGT+AGG 0.589060 7_1:+80131550 None:intergenic
CTACTCACTCCAACACAACA+TGG 0.590586 7_1:+80131667 None:intergenic
TGGTTCATCCTACGGAGGCA+GGG 0.591879 7_1:-80131558 Msa1042300:CDS
TCTTCCGTCGGAGAAACGGC+CGG 0.593067 7_1:+80136520 None:intergenic
AAGTTGAGGCCATGTTGTGT+TGG 0.607650 7_1:-80131676 Msa1042300:CDS
TGAGTGTGGAAAGTGAATGA+GGG 0.608404 7_1:+80136858 None:intergenic
AGAGTCCTCACCGACTACAT+TGG 0.611378 7_1:-80136500 Msa1042300:intron
AAAGAAATCCATGATGAGTG+TGG 0.611854 7_1:+80136844 None:intergenic
GGAGATTCATATGCAGACAC+AGG 0.624374 7_1:-80136611 Msa1042300:CDS
GTCGGTGAGGACTCTTCCGT+CGG 0.625649 7_1:+80136508 None:intergenic
TAAGGAAAATAAGAGAGAGG+AGG 0.625688 7_1:+80136816 None:intergenic
GTGTGTTATGGTAAAGTGTG+AGG 0.626613 7_1:+80131827 None:intergenic
ACAACATTCAGGACAAGTTG+AGG 0.632946 7_1:-80131690 Msa1042300:CDS
CACCAGTCCCATACAGCCTG+AGG 0.637312 7_1:-80133352 Msa1042300:CDS
CTAGTCGTGAATCTGTTGAA+GGG 0.640533 7_1:+80131498 None:intergenic
TTACACGGTCACAAATGGCT+CGG 0.640697 7_1:-80133129 Msa1042300:CDS
AAACACACCAGTACCACCAA+AGG 0.644534 7_1:+80133289 None:intergenic
TTTATTTACAGGACAAAGGG+TGG 0.645883 7_1:-80136702 Msa1042300:intron
AACACACGTACCAATGTAGT+CGG 0.649118 7_1:+80136490 None:intergenic
GGATTTGGTTCATCCTACGG+AGG 0.678226 7_1:-80131563 Msa1042300:CDS
TTCATCCTACGGAGGCAGGG+TGG 0.704100 7_1:-80131555 Msa1042300:CDS
ACGTACCAATGTAGTCGGTG+AGG 0.706214 7_1:+80136495 None:intergenic
TGTTATGGTAAAGTGTGAGG+AGG 0.725810 7_1:+80131830 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATTTTTTGAAATAAAAA+TGG - chr7_1:80135223-80135242 Msa1042300:intron 10.0%
!!! CAAATTTTAATTTTACAATA+TGG + chr7_1:80135781-80135800 None:intergenic 10.0%
!! ATTGTAAAATTAAAATTTGA+TGG - chr7_1:80135782-80135801 Msa1042300:intron 10.0%
!! TGAATGTATAATTACTAAAA+GGG + chr7_1:80133599-80133618 None:intergenic 15.0%
!! TTGAATGTATAATTACTAAA+AGG + chr7_1:80133600-80133619 None:intergenic 15.0%
!!! TTAGTTACACTATTTTTAAT+TGG - chr7_1:80133829-80133848 Msa1042300:intron 15.0%
!!! ACTTTGAAATAAGAAAAATA+AGG + chr7_1:80134003-80134022 None:intergenic 15.0%
!! TAATTATCAATCATGTTATT+TGG - chr7_1:80134168-80134187 Msa1042300:intron 15.0%
!! TTCTATTCAAATGTAAATAA+TGG + chr7_1:80134226-80134245 None:intergenic 15.0%
!! ATTATTTACATTTGAATAGA+AGG - chr7_1:80134225-80134244 Msa1042300:intron 15.0%
!!! AAATTTGTTTTTCAGTAAAT+AGG + chr7_1:80134778-80134797 None:intergenic 15.0%
!! TAATCTTAAACAAATTATGT+TGG + chr7_1:80135325-80135344 None:intergenic 15.0%
!! TAGTAAAATATTACTATCTT+TGG - chr7_1:80135430-80135449 Msa1042300:intron 15.0%
!!! AAACCTAGTATATATATTTT+CGG - chr7_1:80135503-80135522 Msa1042300:intron 15.0%
!! ACAGATTAAATTATTTATTG+TGG + chr7_1:80136048-80136067 None:intergenic 15.0%
!! TATGAATAAATAATTTAGCA+AGG - chr7_1:80136113-80136132 Msa1042300:intron 15.0%
!! ATGAATAAATAATTTAGCAA+GGG - chr7_1:80136114-80136133 Msa1042300:intron 15.0%
!!! TTTAAATTGATCAACTTTTT+GGG + chr7_1:80136141-80136160 None:intergenic 15.0%
!!! ATTTAAATTGATCAACTTTT+TGG + chr7_1:80136142-80136161 None:intergenic 15.0%
!!! AACAATTTGTATATTTTGTA+GGG - chr7_1:80136253-80136272 Msa1042300:intron 15.0%
!! GAATAATGTTAAGAAATATT+TGG - chr7_1:80136657-80136676 Msa1042300:CDS 15.0%
!! TGTGAATGAACTATATATAA+TGG + chr7_1:80131298-80131317 None:intergenic 20.0%
!! TATATTTATTTACAGGACAA+AGG - chr7_1:80131568-80131587 Msa1042300:CDS 20.0%
!! ATATTTATTTACAGGACAAA+GGG - chr7_1:80131569-80131588 Msa1042300:CDS 20.0%
!!! TTATGATCATGATTATGTTT+TGG + chr7_1:80131618-80131637 None:intergenic 20.0%
!! AAAACATAATCATGATCATA+AGG - chr7_1:80131617-80131636 Msa1042300:CDS 20.0%
!! AAACATAATCATGATCATAA+GGG - chr7_1:80131618-80131637 Msa1042300:CDS 20.0%
!!! TCTGCTTTTATATACTTTAT+GGG - chr7_1:80132152-80132171 Msa1042300:intron 20.0%
!! CTAAACTATCTAAATATGAA+AGG + chr7_1:80132183-80132202 None:intergenic 20.0%
!!! AAATTGAGAGTGTTAATTTA+AGG - chr7_1:80132208-80132227 Msa1042300:intron 20.0%
!! TAATTTAAGGACTTAGTTAA+TGG - chr7_1:80132221-80132240 Msa1042300:intron 20.0%
!!! AACAACTTTTAGAAATATTG+AGG + chr7_1:80132298-80132317 None:intergenic 20.0%
!!! TTCAAAAAAAAAAAAGCGTA+AGG - chr7_1:80132440-80132459 Msa1042300:intron 20.0%
!!! ACATTTTTGTCTTATAACTT+TGG + chr7_1:80132605-80132624 None:intergenic 20.0%
!!! ATACTCTTAATTACCATTTT+TGG + chr7_1:80132653-80132672 None:intergenic 20.0%
!! TTCAGTGAACATAATTATAT+GGG + chr7_1:80132730-80132749 None:intergenic 20.0%
!! TTTCAGTGAACATAATTATA+TGG + chr7_1:80132731-80132750 None:intergenic 20.0%
!! GAAACTAGTTAATCAATATA+TGG - chr7_1:80132769-80132788 Msa1042300:intron 20.0%
!! TTTAGTAATCATTGCTTTAA+CGG - chr7_1:80133054-80133073 Msa1042300:intron 20.0%
!!! AATTGCTTATAATTGCTTTT+TGG + chr7_1:80133247-80133266 None:intergenic 20.0%
!! AAAGAAAGAGAATTGATAAA+GGG + chr7_1:80133370-80133389 None:intergenic 20.0%
!! TAAAGAAAGAGAATTGATAA+AGG + chr7_1:80133371-80133390 None:intergenic 20.0%
!!! TGACATTAATCTATTCATTT+TGG + chr7_1:80133867-80133886 None:intergenic 20.0%
!! ATAAGAAAAATAAGGATATC+CGG + chr7_1:80133995-80134014 None:intergenic 20.0%
!!! TGATTGATAATTACGTAAAT+GGG + chr7_1:80134161-80134180 None:intergenic 20.0%
!!! ATGATTGATAATTACGTAAA+TGG + chr7_1:80134162-80134181 None:intergenic 20.0%
!! AATGTTGTGTTTACAATAAT+TGG + chr7_1:80134297-80134316 None:intergenic 20.0%
!!! ATAATTAAGATTTTTAGTGC+AGG + chr7_1:80134662-80134681 None:intergenic 20.0%
!! ATCTTAACATTACATCTTAT+TGG - chr7_1:80135246-80135265 Msa1042300:intron 20.0%
!! ATAATTTAATAAACTACACG+TGG - chr7_1:80135389-80135408 Msa1042300:intron 20.0%
!! TTACCGAAAATATATATACT+AGG + chr7_1:80135509-80135528 None:intergenic 20.0%
!! AAAGAGCAAAGAAATATTAA+GGG + chr7_1:80135612-80135631 None:intergenic 20.0%
!! TAAAGAGCAAAGAAATATTA+AGG + chr7_1:80135613-80135632 None:intergenic 20.0%
!! ATTTCTTTGCTCTTTAATAT+AGG - chr7_1:80135617-80135636 Msa1042300:intron 20.0%
!! ATCATCTTATCTAATATTAG+AGG + chr7_1:80135700-80135719 None:intergenic 20.0%
!!! TTTTAATTTTACAATATGGG+TGG + chr7_1:80135777-80135796 None:intergenic 20.0%
!! ATAATTTAATCTGTAACACT+AGG - chr7_1:80136054-80136073 Msa1042300:intron 20.0%
!!! TTAAATTGATCAACTTTTTG+GGG + chr7_1:80136140-80136159 None:intergenic 20.0%
!!! TCAAAAGTCTAATTTGTATA+TGG + chr7_1:80136169-80136188 None:intergenic 20.0%
!!! GAACAATTTGTATATTTTGT+AGG - chr7_1:80136252-80136271 Msa1042300:intron 20.0%
!! TAAAGATTAAGAACTAAGAA+AGG + chr7_1:80136526-80136545 None:intergenic 20.0%
!! CAATGAATTTAACAAACAAA+AGG + chr7_1:80136877-80136896 None:intergenic 20.0%
! ATATAGTTCATTCACACTAT+AGG - chr7_1:80131302-80131321 Msa1042300:three_prime_UTR 25.0%
! GTATCAAAATTGTTTGTGTT+TGG - chr7_1:80131642-80131661 Msa1042300:CDS 25.0%
! ACATGAAAATCTTTCAATTC+AGG - chr7_1:80132097-80132116 Msa1042300:intron 25.0%
!!! GTCTGCTTTTATATACTTTA+TGG - chr7_1:80132151-80132170 Msa1042300:intron 25.0%
!!! AAAATGTGTCACTTTCAATA+TGG - chr7_1:80132618-80132637 Msa1042300:intron 25.0%
! ATGGATAATACTACCAAAAA+TGG - chr7_1:80132637-80132656 Msa1042300:intron 25.0%
!! TTTTTACAAAACACAGTTGT+AGG + chr7_1:80132703-80132722 None:intergenic 25.0%
! ACTAGTTAATCAATATATGG+TGG - chr7_1:80132772-80132791 Msa1042300:intron 25.0%
! CTAGTTAATCAATATATGGT+GGG - chr7_1:80132773-80132792 Msa1042300:intron 25.0%
! TAGTTAATCAATATATGGTG+GGG - chr7_1:80132774-80132793 Msa1042300:intron 25.0%
! TGCTAATTGTTTATCTATTC+TGG - chr7_1:80132835-80132854 Msa1042300:intron 25.0%
! AAAACAGTGCAAAAAAGAAA+GGG + chr7_1:80132931-80132950 None:intergenic 25.0%
! AAAAACAGTGCAAAAAAGAA+AGG + chr7_1:80132932-80132951 None:intergenic 25.0%
!!! AACTGCTTATAATTGCTTTT+TGG + chr7_1:80133173-80133192 None:intergenic 25.0%
!! AAACCAAACATGTTGTATTT+TGG + chr7_1:80133200-80133219 None:intergenic 25.0%
! AAAATACAACATGTTTGGTT+TGG - chr7_1:80133199-80133218 Msa1042300:CDS 25.0%
! ACTAAAATAGACATAGCTAA+AGG + chr7_1:80133402-80133421 None:intergenic 25.0%
!!! TAGCTATGTCTATTTTAGTA+AGG - chr7_1:80133403-80133422 Msa1042300:intron 25.0%
!!! AGCTATGTCTATTTTAGTAA+GGG - chr7_1:80133404-80133423 Msa1042300:intron 25.0%
!! TGACTTAAAATTTCCACTTT+TGG + chr7_1:80133469-80133488 None:intergenic 25.0%
! TAAACAAACTGAATGTTGTT+TGG + chr7_1:80133645-80133664 None:intergenic 25.0%
! ACTAAATTACAATGCTTCTT+AGG - chr7_1:80133959-80133978 Msa1042300:intron 25.0%
!!! CTACTTAATTTCTAGTACTT+CGG + chr7_1:80134119-80134138 None:intergenic 25.0%
! AAGTACTAGAAATTAAGTAG+AGG - chr7_1:80134119-80134138 Msa1042300:intron 25.0%
!!! AGAATACGTTTTTTCATGTT+TGG - chr7_1:80134443-80134462 Msa1042300:intron 25.0%
!! ATGTGAATCGCTTTAAATTT+AGG - chr7_1:80134567-80134586 Msa1042300:intron 25.0%
! ATTTAGGAAAAACTATACCT+AGG - chr7_1:80134583-80134602 Msa1042300:intron 25.0%
!!! CGTAATTTTTTTAAAGACCT+AGG + chr7_1:80134603-80134622 None:intergenic 25.0%
! ATATTGTTGAAAGTCTCATT+GGG - chr7_1:80134717-80134736 Msa1042300:intron 25.0%
!! AAGCTTTTGTATTTTTCTTC+TGG - chr7_1:80134825-80134844 Msa1042300:intron 25.0%
! TGATTTCACTTTCAAATACT+TGG + chr7_1:80134904-80134923 None:intergenic 25.0%
! ATTCCATATTTCAAATGTTG+TGG + chr7_1:80134957-80134976 None:intergenic 25.0%
! CTGTTGAAAAAAATTGATCT+GGG + chr7_1:80135042-80135061 None:intergenic 25.0%
! TCTGTTGAAAAAAATTGATC+TGG + chr7_1:80135043-80135062 None:intergenic 25.0%
!!! AACTGAATTATTGATTTCTG+AGG + chr7_1:80135090-80135109 None:intergenic 25.0%
! TGATGGAAATAATGAAATGA+TGG - chr7_1:80135799-80135818 Msa1042300:intron 25.0%
! ATAATGAAATGATGGCATTA+AGG - chr7_1:80135807-80135826 Msa1042300:intron 25.0%
!!! TTGGATTCTGTCTTATTTTA+AGG + chr7_1:80135864-80135883 None:intergenic 25.0%
!!! TTTTGTTTGTTGGTTCAATT+TGG + chr7_1:80136491-80136510 None:intergenic 25.0%
!!! TAGAATGATGTTTTGTTTGT+TGG + chr7_1:80136501-80136520 None:intergenic 25.0%
AATCTTTGTGATTGTGATGA+AGG + chr7_1:80131356-80131375 None:intergenic 30.0%
GAATAAGGAAAATAAGAGAG+AGG + chr7_1:80131464-80131483 None:intergenic 30.0%
AATTCATGGAAACATCCTTA+TGG - chr7_1:80131708-80131727 Msa1042300:CDS 30.0%
!! ATTTGTTGTAATGATGCAGT+TGG + chr7_1:80131815-80131834 None:intergenic 30.0%
TCATTAGTGAGTATTTGAGT+AGG + chr7_1:80132507-80132526 None:intergenic 30.0%
TAAACAATTAGCACGAGAAA+AGG + chr7_1:80132828-80132847 None:intergenic 30.0%
GGGTGTGCTAAAAATAAAAA+AGG + chr7_1:80132910-80132929 None:intergenic 30.0%
AAACAGTGCAAAAAAGAAAG+GGG + chr7_1:80132930-80132949 None:intergenic 30.0%
ATAAGAACAAAAGTCTGTGT+GGG + chr7_1:80133027-80133046 None:intergenic 30.0%
AATAAGAACAAAAGTCTGTG+TGG + chr7_1:80133028-80133047 None:intergenic 30.0%
TTTGAAAAGCTAAACCAAAC+AGG + chr7_1:80133139-80133158 None:intergenic 30.0%
TAGCCAAAATACAACATGTT+TGG - chr7_1:80133194-80133213 Msa1042300:CDS 30.0%
GGGCAATAAAGGAAAATAAT+AGG + chr7_1:80133350-80133369 None:intergenic 30.0%
GAATTGATAAAGGGCAATAA+AGG + chr7_1:80133361-80133380 None:intergenic 30.0%
! TGGGAGAATTGATTTATGTT+TGG + chr7_1:80133689-80133708 None:intergenic 30.0%
! ATTCTGACAGAATTGATTCT+GGG + chr7_1:80133708-80133727 None:intergenic 30.0%
AAAATAAGGATATCCGGAAT+CGG + chr7_1:80133989-80134008 None:intergenic 30.0%
AACACAACATTCTTTGACAT+AGG - chr7_1:80134306-80134325 Msa1042300:intron 30.0%
CCTTCTACATAGAGTTTAAA+AGG + chr7_1:80134355-80134374 None:intergenic 30.0%
! CCTTTTAAACTCTATGTAGA+AGG - chr7_1:80134352-80134371 Msa1042300:intron 30.0%
! TTTATTTGACGCAGCTTTTA+GGG - chr7_1:80134470-80134489 Msa1042300:intron 30.0%
TGATTTAAAGACTTGACTGA+GGG + chr7_1:80134547-80134566 None:intergenic 30.0%
TTGATTTAAAGACTTGACTG+AGG + chr7_1:80134548-80134567 None:intergenic 30.0%
! TTAGTGCAGGTTTAAAATTG+CGG + chr7_1:80134649-80134668 None:intergenic 30.0%
AAGAGGTTAACAAAACTCAT+CGG + chr7_1:80134688-80134707 None:intergenic 30.0%
ATGAGACTTTCAACAATATG+CGG + chr7_1:80134716-80134735 None:intergenic 30.0%
CATATTGTTGAAAGTCTCAT+TGG - chr7_1:80134716-80134735 Msa1042300:intron 30.0%
! ATGCCACAACATTTGAAATA+TGG - chr7_1:80134951-80134970 Msa1042300:intron 30.0%
TCATCTTGTCTAATGTTCTT+GGG + chr7_1:80135750-80135769 None:intergenic 30.0%
ATCATCTTGTCTAATGTTCT+TGG + chr7_1:80135751-80135770 None:intergenic 30.0%
! TCCAAACTTTACTCATTTTC+CGG - chr7_1:80135879-80135898 Msa1042300:intron 30.0%
!! GAAAAGAAGTATCTACCTAA+CGG + chr7_1:80135914-80135933 None:intergenic 30.0%
! GATACTTCTTTTCTGCTTAT+AGG - chr7_1:80135921-80135940 Msa1042300:intron 30.0%
GAAAGAATACCTCAATGTAA+GGG + chr7_1:80135969-80135988 None:intergenic 30.0%
TGAAAGAATACCTCAATGTA+AGG + chr7_1:80135970-80135989 None:intergenic 30.0%
! TGAGGTATTCTTTCATTGAT+AGG - chr7_1:80135975-80135994 Msa1042300:intron 30.0%
GAGGTCTTCTTTCATAAAAA+AGG - chr7_1:80136021-80136040 Msa1042300:intron 30.0%
ACAAACATTATTCGCATCAA+AGG - chr7_1:80136316-80136335 Msa1042300:intron 30.0%
ATTATTCGCATCAAAGGATT+GGG - chr7_1:80136322-80136341 Msa1042300:intron 30.0%
GTGAATAATCTACAACCAAT+TGG - chr7_1:80136361-80136380 Msa1042300:intron 30.0%
TCTTTACGATAGTTTCATGT+CGG - chr7_1:80136540-80136559 Msa1042300:CDS 30.0%
! AACCTAAATCTGCTTTCTTT+TGG - chr7_1:80136689-80136708 Msa1042300:CDS 30.0%
! ACCTAAATCTGCTTTCTTTT+GGG - chr7_1:80136690-80136709 Msa1042300:CDS 30.0%
AAATAGTGCCAAGAAAAGAT+TGG - chr7_1:80136803-80136822 Msa1042300:CDS 30.0%
! ATAACGATTTCAACTGCTTT+TGG - chr7_1:80136916-80136935 Msa1042300:five_prime_UTR 30.0%
!! TAACGATTTCAACTGCTTTT+GGG - chr7_1:80136917-80136936 Msa1042300:five_prime_UTR 30.0%
AAAGAAATCCATGATGAGTG+TGG + chr7_1:80131433-80131452 None:intergenic 35.0%
AAAATAAGAGAGAGGAGGAA+GGG + chr7_1:80131456-80131475 None:intergenic 35.0%
TAAGGAAAATAAGAGAGAGG+AGG + chr7_1:80131461-80131480 None:intergenic 35.0%
TTCCTTATTCTACATCTCTC+AGG - chr7_1:80131474-80131493 Msa1042300:three_prime_UTR 35.0%
TACCTGAGAGATGTAGAATA+AGG + chr7_1:80131479-80131498 None:intergenic 35.0%
TTTATTTACAGGACAAAGGG+TGG - chr7_1:80131572-80131591 Msa1042300:CDS 35.0%
AGGTAACATCAAAAGAGGTT+TGG - chr7_1:80131683-80131702 Msa1042300:CDS 35.0%
AAAGAGGTTTGGCTAATTCA+TGG - chr7_1:80131694-80131713 Msa1042300:CDS 35.0%
TCTTTCAATTCAGGACATGA+TGG - chr7_1:80132106-80132125 Msa1042300:intron 35.0%
CATTACCATTTCCTCTCTAT+GGG - chr7_1:80133113-80133132 Msa1042300:intron 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG + chr7_1:80133288-80133307 None:intergenic 35.0%
! GATTCTGACAGAATTGATTC+TGG + chr7_1:80133709-80133728 None:intergenic 35.0%
TCAATGACATAGTGTGTGTT+TGG + chr7_1:80133766-80133785 None:intergenic 35.0%
! ATATTTTGCTCGAAATGTCG+TGG + chr7_1:80133808-80133827 None:intergenic 35.0%
GATTAATGCAAAGTATGCAG+TGG + chr7_1:80133901-80133920 None:intergenic 35.0%
AAATAAGGATATCCGGAATC+GGG + chr7_1:80133988-80134007 None:intergenic 35.0%
CGTCAGATCATTGTGATAAA+AGG + chr7_1:80134038-80134057 None:intergenic 35.0%
! TTTTGCTGACAAAGTTAGAG+AGG + chr7_1:80134065-80134084 None:intergenic 35.0%
TTCGGCAACATGATTAAAGT+TGG + chr7_1:80134101-80134120 None:intergenic 35.0%
ACATTTGAATAGAAGGCAAG+CGG - chr7_1:80134232-80134251 Msa1042300:intron 35.0%
!!! ATTGGTTTTGCCTTCCAAAA+AGG + chr7_1:80134279-80134298 None:intergenic 35.0%
!! TTTCGATTTTCTAGCATCAG+AGG + chr7_1:80134385-80134404 None:intergenic 35.0%
AAAAGCTGCGTCAAATAAAG+TGG + chr7_1:80134469-80134488 None:intergenic 35.0%
!! CTTTATTTGACGCAGCTTTT+AGG - chr7_1:80134469-80134488 Msa1042300:intron 35.0%
AACAATATGCGGCAATTAAG+AGG + chr7_1:80134705-80134724 None:intergenic 35.0%
TATGGAATGAACTTTGCCTT+TGG - chr7_1:80134969-80134988 Msa1042300:intron 35.0%
ATGCTTATTAAGTGCAAACG+TGG - chr7_1:80135276-80135295 Msa1042300:intron 35.0%
ATAAACTACACGTGGAACTT+CGG - chr7_1:80135397-80135416 Msa1042300:intron 35.0%
CGAGTGTCATAAAGATACAA+TGG + chr7_1:80135589-80135608 None:intergenic 35.0%
ACCGGAAAATGAGTAAAGTT+TGG + chr7_1:80135883-80135902 None:intergenic 35.0%
! ACTTCTTTTCTGCTTATAGG+AGG - chr7_1:80135924-80135943 Msa1042300:intron 35.0%
TTTCTGCTTATAGGAGGAAA+TGG - chr7_1:80135930-80135949 Msa1042300:intron 35.0%
AGGAGGAAATGGACAAATAA+AGG - chr7_1:80135941-80135960 Msa1042300:intron 35.0%
ATAAAGGAACCCTTACATTG+AGG - chr7_1:80135957-80135976 Msa1042300:intron 35.0%
GAAAGAAGACCTCAATGTAA+GGG + chr7_1:80136014-80136033 None:intergenic 35.0%
TGAAAGAAGACCTCAATGTA+AGG + chr7_1:80136015-80136034 None:intergenic 35.0%
CATTATTCGCATCAAAGGAT+TGG - chr7_1:80136321-80136340 Msa1042300:intron 35.0%
ATTGAAGGTAGACATCCAAT+TGG + chr7_1:80136379-80136398 None:intergenic 35.0%
TTCGTTGCATTGTTTGAATG+AGG + chr7_1:80136413-80136432 None:intergenic 35.0%
! CTTGAGTTAAGAGTGTGTTA+TGG + chr7_1:80136462-80136481 None:intergenic 35.0%
!! TTGTTGGTTCAATTTGGTCA+CGG + chr7_1:80136485-80136504 None:intergenic 35.0%
!! GTGAGTAGCAAGTATTTTTG+TGG - chr7_1:80136622-80136641 Msa1042300:CDS 35.0%
TCCCAAAAGAAAGCAGATTT+AGG + chr7_1:80136694-80136713 None:intergenic 35.0%
!!! ATCTGCTTTCTTTTGGGATT+TGG - chr7_1:80136696-80136715 Msa1042300:intron 35.0%
! CACAAGAACCAATCTTTTCT+TGG + chr7_1:80136814-80136833 None:intergenic 35.0%
! TGGCTACTTTGTTTGAGAGA+GGG + chr7_1:80131392-80131411 None:intergenic 40.0%
TGAGTGTGGAAAGTGAATGA+GGG + chr7_1:80131419-80131438 None:intergenic 40.0%
ATGAGTGTGGAAAGTGAATG+AGG + chr7_1:80131420-80131439 None:intergenic 40.0%
TTCACTTTCCACACTCATCA+TGG - chr7_1:80131422-80131441 Msa1042300:three_prime_UTR 40.0%
GAAAATAAGAGAGAGGAGGA+AGG + chr7_1:80131457-80131476 None:intergenic 40.0%
GACACAGGTAACATCAAAAG+AGG - chr7_1:80131678-80131697 Msa1042300:CDS 40.0%
AACACACGTACCAATGTAGT+CGG + chr7_1:80131787-80131806 None:intergenic 40.0%
TACTCGCATCTTCAAGCATA+AGG - chr7_1:80132406-80132425 Msa1042300:intron 40.0%
GTTTATCTATTCTGGCGTTG+TGG - chr7_1:80132843-80132862 Msa1042300:intron 40.0%
CCATAGAGAGGAAATGGTAA+TGG + chr7_1:80133115-80133134 None:intergenic 40.0%
CCATTACCATTTCCTCTCTA+TGG - chr7_1:80133112-80133131 Msa1042300:intron 40.0%
AGCTAGGATTTGTAGCTTCA+TGG + chr7_1:80133272-80133291 None:intergenic 40.0%
!! GTGGCAGTATTGGTAAAAAG+AGG + chr7_1:80133789-80133808 None:intergenic 40.0%
ATGCAAAGTATGCAGTGGTT+TGG + chr7_1:80133896-80133915 None:intergenic 40.0%
! TTTTGCCTTCCAAAAAGGCT+TGG + chr7_1:80134274-80134293 None:intergenic 40.0%
!!! ATTAGGTGTCGGACCTTTTA+TGG + chr7_1:80134508-80134527 None:intergenic 40.0%
! TGCAGGTTTAAAATTGCGGT+GGG + chr7_1:80134645-80134664 None:intergenic 40.0%
TCAATTTCCTCAGGCTGTAT+GGG + chr7_1:80134932-80134951 None:intergenic 40.0%
ATCAATTTCCTCAGGCTGTA+TGG + chr7_1:80134933-80134952 None:intergenic 40.0%
GTGTTTGATACGTTGAATCC+AGG - chr7_1:80135002-80135021 Msa1042300:intron 40.0%
TGATCTGGGTTGTCATGTTT+GGG + chr7_1:80135028-80135047 None:intergenic 40.0%
TTGATCTGGGTTGTCATGTT+TGG + chr7_1:80135029-80135048 None:intergenic 40.0%
AAACGACTACACTCGTTACA+CGG - chr7_1:80135130-80135149 Msa1042300:intron 40.0%
! GTGCTTTAAGCATGCTATCT+CGG - chr7_1:80135364-80135383 Msa1042300:intron 40.0%
TACCTAACGGTAACATTGAC+CGG + chr7_1:80135901-80135920 None:intergenic 40.0%
TTCATTGATAGGATGCCCAA+TGG - chr7_1:80135986-80136005 Msa1042300:intron 40.0%
CTCAATGTAAGGGTTCCATT+GGG + chr7_1:80136004-80136023 None:intergenic 40.0%
TGTTATGGTAAAGTGTGAGG+AGG + chr7_1:80136447-80136466 None:intergenic 40.0%
GTGTGTTATGGTAAAGTGTG+AGG + chr7_1:80136450-80136469 None:intergenic 40.0%
TCCATCTACACACAACATTC+AGG - chr7_1:80136573-80136592 Msa1042300:CDS 40.0%
TCCTGAATGTTGTGTGTAGA+TGG + chr7_1:80136577-80136596 None:intergenic 40.0%
ACAACATTCAGGACAAGTTG+AGG - chr7_1:80136584-80136603 Msa1042300:CDS 40.0%
! TTGGGATTTGGTTCATCCTA+CGG - chr7_1:80136708-80136727 Msa1042300:intron 40.0%
CTAGTCGTGAATCTGTTGAA+GGG + chr7_1:80136779-80136798 None:intergenic 40.0%
ACTAGTCGTGAATCTGTTGA+AGG + chr7_1:80136780-80136799 None:intergenic 40.0%
! GTGGCTACTTTGTTTGAGAG+AGG + chr7_1:80131393-80131412 None:intergenic 45.0%
GGAAAGTGAATGAGGGATAG+TGG + chr7_1:80131412-80131431 None:intergenic 45.0%
GGAGATTCATATGCAGACAC+AGG - chr7_1:80131663-80131682 Msa1042300:CDS 45.0%
CCTTATGGTATCACCTTTCC+CGG - chr7_1:80131723-80131742 Msa1042300:CDS 45.0%
GACATGATGGCATCTTAAGC+AGG - chr7_1:80132119-80132138 Msa1042300:intron 45.0%
CTGGTTAAGGAAGCCAAAAG+TGG - chr7_1:80133453-80133472 Msa1042300:intron 45.0%
TCGAAATGTCGTGGCAGTAT+TGG + chr7_1:80133799-80133818 None:intergenic 45.0%
CTTCTTAGGATTCCCGATTC+CGG - chr7_1:80133973-80133992 Msa1042300:intron 45.0%
GTTTCACCACTTGTGGGATT+AGG + chr7_1:80134525-80134544 None:intergenic 45.0%
! GTGCAGGTTTAAAATTGCGG+TGG + chr7_1:80134646-80134665 None:intergenic 45.0%
GTTGTGGCATCAATTTCCTC+AGG + chr7_1:80134941-80134960 None:intergenic 45.0%
GGAATGAACTTTGCCTTTGG+TGG - chr7_1:80134972-80134991 Msa1042300:intron 45.0%
! AACTTTGCCTTTGGTGGTAC+TGG - chr7_1:80134978-80134997 Msa1042300:intron 45.0%
AAACACACCAGTACCACCAA+AGG + chr7_1:80134988-80135007 None:intergenic 45.0%
ACTCGTTACACGGTCACAAA+TGG - chr7_1:80135140-80135159 Msa1042300:intron 45.0%
TTACACGGTCACAAATGGCT+CGG - chr7_1:80135145-80135164 Msa1042300:intron 45.0%
TTCCGGTCAATGTTACCGTT+AGG - chr7_1:80135896-80135915 Msa1042300:intron 45.0%
CCTCAATGTAAGGGTTCCAT+TGG + chr7_1:80136005-80136024 None:intergenic 45.0%
CCAATGGAACCCTTACATTG+AGG - chr7_1:80136002-80136021 Msa1042300:intron 45.0%
GGCTCCACTCAAATTGTCTA+CGG - chr7_1:80136075-80136094 Msa1042300:intron 45.0%
GCTCCACTCAAATTGTCTAC+GGG - chr7_1:80136076-80136095 Msa1042300:intron 45.0%
GAACCCGTAGACAATTTGAG+TGG + chr7_1:80136082-80136101 None:intergenic 45.0%
GAGGATGAAGCTGTCATTGA+AGG + chr7_1:80136394-80136413 None:intergenic 45.0%
AAGTTGAGGCCATGTTGTGT+TGG - chr7_1:80136598-80136617 Msa1042300:CDS 45.0%
CTACTCACTCCAACACAACA+TGG + chr7_1:80136610-80136629 None:intergenic 45.0%
!! AAATTTATATATTTATTTAC+AGG - chr7_1:80131561-80131580 Msa1042300:CDS 5.0%
!!! AAATTTTAATTTTACAATAT+GGG + chr7_1:80135780-80135799 None:intergenic 5.0%
!! CTATAAATTTAAAAAAAAAA+AGG + chr7_1:80136192-80136211 None:intergenic 5.0%
CCGGGAAAGGTGATACCATA+AGG + chr7_1:80131726-80131745 None:intergenic 50.0%
! AGAGTCCTCACCGACTACAT+TGG - chr7_1:80131774-80131793 Msa1042300:CDS 50.0%
ACGTACCAATGTAGTCGGTG+AGG + chr7_1:80131782-80131801 None:intergenic 50.0%
GGTGGGGTTCATTTCTCTAC+TGG - chr7_1:80132790-80132809 Msa1042300:intron 50.0%
AAGTCTGTGTGGGCAAAGCT+TGG + chr7_1:80133017-80133036 None:intergenic 50.0%
ACAGGCCCATAGAGAGGAAA+TGG + chr7_1:80133121-80133140 None:intergenic 50.0%
TTCCTCTCTATGGGCCTGTT+TGG - chr7_1:80133122-80133141 Msa1042300:intron 50.0%
AACCAAACAGGCCCATAGAG+AGG + chr7_1:80133127-80133146 None:intergenic 50.0%
TAACTCCTTAACCAGTGCCC+CGG - chr7_1:80133555-80133574 Msa1042300:intron 50.0%
AAATGTTAACCAGTGCCCCC+GGG + chr7_1:80133576-80133595 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+CGG + chr7_1:80133577-80133596 None:intergenic 50.0%
CCACTTGTGGGATTAGGTGT+CGG + chr7_1:80134519-80134538 None:intergenic 50.0%
CTGAGGGTTTCACCACTTGT+GGG + chr7_1:80134531-80134550 None:intergenic 50.0%
ACTGAGGGTTTCACCACTTG+TGG + chr7_1:80134532-80134551 None:intergenic 50.0%
CGGTGGGATTGACGAAATCA+CGG + chr7_1:80134629-80134648 None:intergenic 50.0%
! GGATTTGGTTCATCCTACGG+AGG - chr7_1:80136711-80136730 Msa1042300:intron 50.0%
GGACTCTTCCGTCGGAGAAA+CGG + chr7_1:80131761-80131780 None:intergenic 55.0%
GTCATGTTAACCAGTGCCCC+CGG - chr7_1:80133426-80133445 Msa1042300:intron 55.0%
TCATGTTAACCAGTGCCCCC+GGG - chr7_1:80133427-80133446 Msa1042300:intron 55.0%
AACTCCTTAACCAGTGCCCC+GGG - chr7_1:80133556-80133575 Msa1042300:intron 55.0%
AATGTTAACCAGTGCCCCCG+GGG + chr7_1:80133575-80133594 None:intergenic 55.0%
! CGTCGCCAAGCCTTTTTGGA+AGG - chr7_1:80134266-80134285 Msa1042300:intron 55.0%
GCTGCCTGTCGCACCATAAA+AGG - chr7_1:80134492-80134511 Msa1042300:intron 55.0%
! CGGACCTTTTATGGTGCGAC+AGG + chr7_1:80134499-80134518 None:intergenic 55.0%
CCGACACCTAATCCCACAAG+TGG - chr7_1:80134516-80134535 Msa1042300:intron 55.0%
TTCCTCAGGCTGTATGGGAC+TGG + chr7_1:80134927-80134946 None:intergenic 55.0%
TGGGTTGTCATGTTTGGGCC+TGG + chr7_1:80135023-80135042 None:intergenic 55.0%
GTTGCTCTTGTCTCTGTCGC+TGG - chr7_1:80135107-80135126 Msa1042300:intron 55.0%
!! GGTCACAAATGGCTCGGTTG+AGG - chr7_1:80135151-80135170 Msa1042300:intron 55.0%
TTGGTTCATCCTACGGAGGC+AGG - chr7_1:80136715-80136734 Msa1042300:intron 55.0%
TGGTTCATCCTACGGAGGCA+GGG - chr7_1:80136716-80136735 Msa1042300:intron 55.0%
ACCTTTCCCGGCAAACCTGC+CGG - chr7_1:80131735-80131754 Msa1042300:CDS 60.0%
TCTTCCGTCGGAGAAACGGC+CGG + chr7_1:80131757-80131776 None:intergenic 60.0%
GTCGGTGAGGACTCTTCCGT+CGG + chr7_1:80131769-80131788 None:intergenic 60.0%
CATGTTAACCAGTGCCCCCG+GGG - chr7_1:80133428-80133447 Msa1042300:intron 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr7_1:80133445-80133464 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + chr7_1:80133446-80133465 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + chr7_1:80133447-80133466 None:intergenic 60.0%
GGCTTCCTTAACCAGTGCCC+CGG + chr7_1:80133448-80133467 None:intergenic 60.0%
ACTCCTTAACCAGTGCCCCG+GGG - chr7_1:80133557-80133576 Msa1042300:intron 60.0%
! GCTGCGTCGCCAAGCCTTTT+TGG - chr7_1:80134262-80134281 Msa1042300:intron 60.0%
CACCAGTCCCATACAGCCTG+AGG - chr7_1:80134922-80134941 Msa1042300:intron 60.0%
TTCATCCTACGGAGGCAGGG+TGG - chr7_1:80136719-80136738 Msa1042300:intron 60.0%
AAACGGCCGGCAGGTTTGCC+GGG + chr7_1:80131744-80131763 None:intergenic 65.0%
GAAACGGCCGGCAGGTTTGC+CGG + chr7_1:80131745-80131764 None:intergenic 65.0%
CTCCTTAACCAGTGCCCCGG+GGG - chr7_1:80133558-80133577 Msa1042300:intron 65.0%
GCCGGCAGGTTTGCCGGGAA+AGG + chr7_1:80131739-80131758 None:intergenic 70.0%
CCTGCCGGCCGTTTCTCCGA+CGG - chr7_1:80131750-80131769 Msa1042300:CDS 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr7_1:80133440-80133459 Msa1042300:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr7_1:80133440-80133459 None:intergenic 70.0%
GCATGCCACCCTGCCTCCGT+AGG + chr7_1:80136727-80136746 None:intergenic 70.0%
CCGTCGGAGAAACGGCCGGC+AGG + chr7_1:80131753-80131772 None:intergenic 75.0%
AACCAGTGCCCCCGGGGCAC+TGG - chr7_1:80133434-80133453 Msa1042300:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG + chr7_1:80133564-80133583 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr7_1:80133564-80133583 Msa1042300:intron 75.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr7_1:80133434-80133453 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 80131294 80137002 80131294 ID=Msa1042300;Name=Msa1042300
chr7_1 mRNA 80131294 80137002 80131294 ID=Msa1042300-mRNA-1;Parent=Msa1042300;Name=Msa1042300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=147|1|1|1|1|1|4|204|354
chr7_1 exon 80131294 80132022 80131294 ID=Msa1042300-mRNA-1:exon:21744;Parent=Msa1042300-mRNA-1
chr7_1 exon 80133124 80133395 80133124 ID=Msa1042300-mRNA-1:exon:21743;Parent=Msa1042300-mRNA-1
chr7_1 exon 80136501 80136713 80136501 ID=Msa1042300-mRNA-1:exon:21742;Parent=Msa1042300-mRNA-1
chr7_1 exon 80136801 80137002 80136801 ID=Msa1042300-mRNA-1:exon:21741;Parent=Msa1042300-mRNA-1
chr7_1 five_prime_UTR 80136856 80137002 80136856 ID=Msa1042300-mRNA-1:five_prime_utr;Parent=Msa1042300-mRNA-1
chr7_1 CDS 80136801 80136855 80136801 ID=Msa1042300-mRNA-1:cds;Parent=Msa1042300-mRNA-1
chr7_1 CDS 80136501 80136713 80136501 ID=Msa1042300-mRNA-1:cds;Parent=Msa1042300-mRNA-1
chr7_1 CDS 80133124 80133395 80133124 ID=Msa1042300-mRNA-1:cds;Parent=Msa1042300-mRNA-1
chr7_1 CDS 80131498 80132022 80131498 ID=Msa1042300-mRNA-1:cds;Parent=Msa1042300-mRNA-1
chr7_1 three_prime_UTR 80131294 80131497 80131294 ID=Msa1042300-mRNA-1:three_prime_utr;Parent=Msa1042300-mRNA-1
Gene Sequence

>Msa1042300

ATGGATTTCTTTCCCTTCCTCCTCTCTCTTATTTTCCTTATTCTACATCTCTCAGGACAAAGGGTGGTAGAAGCTGAAGCTAATCTTCCAAAACATAATCATGATCATAAGGGTGTATCAAAATTGTTTGTGTTTGGAGATTCATATGCAGACACAGGTAACATCAAAAGAGGTTTGGCTAATTCATGGAAACATCCTTATGGTATCACCTTTCCCGGCAAACCTGCCGGCCGTTTCTCCGACGGAAGAGTCCTCACCGACTACATTGCCAAGTATTTGAAAGTGAAATCACCAGTCCCATACAGCCTGAGGAAATTGATGCCACAACATTTGAAATATGGAATGAACTTTGCCTTTGGTGGTACTGGTGTGTTTGATACGTTGAATCCAGGCCCAAACATGACAACCCAGATCAATTTTTTTCAACAGATCATAAAAGACAAAGTGTACACAGCCTCAGAAATCAATAATTCAGTTGCTCTTGTCTCTGTCGCTGGAAACGACTACACTCGTTACACGGTCACAAATGGCTCGGTTGAGGGTTTACCATCATTCATAGCTTCATTGATTAATCAAACAATCACAAACATTATTCGCATCAAAGGATTGGGAGTGAAGAAAGTGATTGTGAATAATCTACAACCAATTGGATGTCTACCTTCAATGACAGCTTCATCCTCATTCAAACAATGCAACGAAACATCTAACAACCTCCTCACACTTTACCATAACACACTCTTAACTCAAGCCGTGACCAAATTGAACCAACAAACAAAACATCATTCTAAACCTTTCTTAGTTCTTAATCTTTACGATAGTTTCATGTCGGTGTTGAATCATCCATCTACACACAACATTCAGGACAAGTTGAGGCCATGTTGTGTTGGAGTGAGTAGCAAGTATTTTTGTGGAAGTGTTGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAGAAACCTAAATCTGCTTTCTTTTGGGATTTGGTTCATCCTACGGAGGCAGGGTGGCATGCTGTTTATAACAAGCTTCGAATAATGAATGCCCTTCAACAGATTCACGACTAG
Protein sequence

>Msa1042300

MDFFPFLLSLIFLILHLSGQRVVEAEANLPKHNHDHKGVSKLFVFGDSYADTGNIKRGLANSWKHPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPVPYSLRKLMPQHLKYGMNFAFGGTGVFDTLNPGPNMTTQINFFQQIIKDKVYTASEINNSVALVSVAGNDYTRYTVTNGSVEGLPSFIASLINQTITNIIRIKGLGVKKVIVNNLQPIGCLPSMTASSSFKQCNETSNNLLTLYHNTLLTQAVTKLNQQTKHHSKPFLVLNLYDSFMSVLNHPSTHNIQDKLRPCCVGVSSKYFCGSVDENNVKKYLVCEKPKSAFFWDLVHPTEAGWHAVYNKLRIMNALQQIHD*