Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394450 | XP_024641228.1 | 84.712 | 713 | 53 | 4 | 22 | 685 | 1 | 706 | 0.0 | 1189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394450 | sp|B3CLY6|TILS_WOLPP | 28.839 | 267 | 134 | 6 | 110 | 350 | 17 | 253 | 6.99e-23 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394450 | A0A0C3VZL5 | 84.669 | 711 | 53 | 4 | 22 | 683 | 1 | 704 | 0.0 | 1184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054640 | Msa1394450 | 0.804096 | 2.545351e-49 | -8.615850e-47 |
| Msa1394450 | Msa1456810 | 0.805123 | 1.554007e-49 | -8.615850e-47 |
| Msa0674220 | Msa1394450 | 0.802553 | 5.310860e-49 | -8.615850e-47 |
| Msa0712980 | Msa1394450 | 0.802263 | 6.096372e-49 | -8.615850e-47 |
| Msa0207000 | Msa1394450 | 0.806933 | 6.464985e-50 | -8.615850e-47 |
| Msa1297090 | Msa1394450 | 0.819249 | 1.282453e-52 | -8.615850e-47 |
| Msa0376510 | Msa1394450 | 0.808249 | 3.397735e-50 | -8.615850e-47 |
| Msa0425050 | Msa1394450 | 0.806132 | 9.542540e-50 | -8.615850e-47 |
| Msa0270270 | Msa1394450 | 0.801098 | 1.056800e-48 | -8.615850e-47 |
| Msa0296760 | Msa1394450 | 0.807544 | 4.799704e-50 | -8.615850e-47 |
| Msa1171690 | Msa1394450 | 0.825971 | 3.503178e-54 | -8.615850e-47 |
| Msa0965200 | Msa1394450 | 0.917842 | 3.241485e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394450 | MtrunA17_Chr6g0485791 | 86.595 | 373 | 27 | 3 | 22 | 372 | 1 | 372 | 0.0 | 625 |
| Msa1394450 | MtrunA17_Chr6g0485801 | 89.172 | 314 | 27 | 1 | 372 | 685 | 10 | 316 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394450 | AT3G24560.2 | 44.813 | 723 | 277 | 13 | 22 | 685 | 1 | 660 | 0.0 | 546 |
| Msa1394450 | AT3G24560.1 | 45.328 | 503 | 198 | 8 | 212 | 685 | 8 | 462 | 5.64e-129 | 389 |
| Msa1394450 | AT3G24560.3 | 45.328 | 503 | 198 | 8 | 212 | 685 | 2 | 456 | 6.27e-129 | 389 |
Find 175 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTGTGCGGCCTCTTC+TGG | 0.128207 | tig0021787:-82162 | Msa1394450:CDS |
| TCATGATTGCAAGGATATTT+TGG | 0.176239 | tig0021787:-78487 | Msa1394450:three_prime_UTR |
| TCAGCAAATTCCATCTTTAA+AGG | 0.198649 | tig0021787:+80016 | None:intergenic |
| CTTTCCGATTTAGTTGATTA+TGG | 0.233286 | tig0021787:-79611 | Msa1394450:CDS |
| ATTTCTTTCCTTGGTCTTGC+AGG | 0.253441 | tig0021787:-81433 | Msa1394450:intron |
| GCTTCATCCAGAACTGATTC+AGG | 0.262848 | tig0021787:+79866 | None:intergenic |
| TACTGGCAAGTTATGGCTTC+TGG | 0.264429 | tig0021787:+78347 | None:intergenic |
| ATGGAAGTTGAATGATAAAA+TGG | 0.265012 | tig0021787:-79645 | Msa1394450:CDS |
| CAAGCATTGCTCTTGCTTGA+TGG | 0.271547 | tig0021787:-78602 | Msa1394450:CDS |
| TCCTATTCCGTGTGAATAAC+TGG | 0.290837 | tig0021787:+81961 | None:intergenic |
| CCTGATGAAATTTCTTTCCT+TGG | 0.294656 | tig0021787:-81442 | Msa1394450:CDS |
| AGCAAGAAACCGACCGCTTC+AGG | 0.299346 | tig0021787:-79787 | Msa1394450:CDS |
| GTGTATGCATAGGGAAAATC+TGG | 0.300879 | tig0021787:+82219 | None:intergenic |
| AAGCTTCTCCTTGCAGCAAC+TGG | 0.300949 | tig0021787:+79326 | None:intergenic |
| CTGTCAGCTTTGGGAGTCTC+TGG | 0.304586 | tig0021787:-83318 | Msa1394450:intron |
| TCGTAACCGCGTTTCTCAAA+TGG | 0.309716 | tig0021787:-83136 | Msa1394450:CDS |
| GATGAAACAGAGGAAGGTTT+TGG | 0.330354 | tig0021787:+85066 | None:intergenic |
| TTTCTTAGTAAAATATGATT+TGG | 0.340149 | tig0021787:-78109 | Msa1394450:three_prime_UTR |
| AGAAGGATGCCTTGATTTGC+CGG | 0.348038 | tig0021787:+82179 | None:intergenic |
| GTCAGAAATGGCTCCAACTT+TGG | 0.353963 | tig0021787:+79763 | None:intergenic |
| CGCTGGTTGTTACCTTTGTC+CGG | 0.354780 | tig0021787:-80095 | Msa1394450:CDS |
| CCATGTTGATTGATCAGAAC+AGG | 0.354843 | tig0021787:+79302 | None:intergenic |
| TGTCCGGATCCTGGTTCTAA+AGG | 0.363993 | tig0021787:-80079 | Msa1394450:CDS |
| TAACCACAGCATGATGTATT+AGG | 0.365616 | tig0021787:+81682 | None:intergenic |
| GTTCCGACTGAAAGAGGTTA+TGG | 0.372302 | tig0021787:-85208 | Msa1394450:CDS |
| GACATGCAGAAATCACTCTT+TGG | 0.377797 | tig0021787:+81742 | None:intergenic |
| TTCGGGCAATTCGCTTCAGC+CGG | 0.382554 | tig0021787:-79705 | Msa1394450:CDS |
| GATGCTTAACATGATCTATA+AGG | 0.388009 | tig0021787:-78230 | Msa1394450:three_prime_UTR |
| ACAGCAATGCTCAATTGATA+TGG | 0.391669 | tig0021787:-85001 | Msa1394450:CDS |
| GTAACAAAGTACAGTGGAAC+AGG | 0.395195 | tig0021787:-85245 | Msa1394450:CDS |
| CATTGCTTTACCTTTAAAGA+TGG | 0.397110 | tig0021787:-80026 | Msa1394450:CDS |
| AGGTCATAGCTCATTCATAT+AGG | 0.404232 | tig0021787:-78542 | Msa1394450:exon |
| TTAAGACTTTCTCGAAATAG+TGG | 0.404893 | tig0021787:-82275 | Msa1394450:CDS |
| ATCAAACCACACCATAGAAT+TGG | 0.408439 | tig0021787:-84934 | Msa1394450:intron |
| ACATAGGTTTAGCTTATGTT+TGG | 0.412372 | tig0021787:-85267 | None:intergenic |
| TTTGTTCATGTTCTTCATCC+AGG | 0.412525 | tig0021787:-78193 | Msa1394450:three_prime_UTR |
| GTCCGGATCCTGGTTCTAAA+GGG | 0.413050 | tig0021787:-80078 | Msa1394450:CDS |
| TGTTACCTTTGTCCGGATCC+TGG | 0.416475 | tig0021787:-80088 | Msa1394450:CDS |
| TGTGAACCCTGAATCAGTTC+TGG | 0.416926 | tig0021787:-79873 | Msa1394450:CDS |
| GACAGTAGTGGTTTCGTTGA+CGG | 0.418599 | tig0021787:-83222 | Msa1394450:CDS |
| AGTGGTGTGCTTGGACTTGC+AGG | 0.422762 | tig0021787:-82257 | Msa1394450:CDS |
| CAGTACAAGAATGCTATTGT+AGG | 0.430481 | tig0021787:+79814 | None:intergenic |
| GATCTATAAGGAATGTAGAT+TGG | 0.430606 | tig0021787:-78218 | Msa1394450:three_prime_UTR |
| CGTAACCGCGTTTCTCAAAT+GGG | 0.431052 | tig0021787:-83135 | Msa1394450:intron |
| TCCACTTCCATCTGGAGTCC+TGG | 0.431298 | tig0021787:+78175 | None:intergenic |
| GGGGCAGTGCTGTTACTTCA+TGG | 0.438369 | tig0021787:-79684 | Msa1394450:CDS |
| CAACACTCCAATCTGGTGTT+TGG | 0.438925 | tig0021787:+82486 | None:intergenic |
| AGAACAGCAAACTAGGACTC+TGG | 0.440719 | tig0021787:+80054 | None:intergenic |
| CATGTTCTACTGGCAAGTTA+TGG | 0.442767 | tig0021787:+78340 | None:intergenic |
| CATGCCATAATCAACTAAAT+CGG | 0.443098 | tig0021787:+79607 | None:intergenic |
| GGTCATAGCTCATTCATATA+GGG | 0.450315 | tig0021787:-78541 | Msa1394450:exon |
| TGGGTCTTCTACCCACTCTT+CGG | 0.451167 | tig0021787:+81995 | None:intergenic |
| TGTTGCTCGTCTTGTGTGGT+TGG | 0.453908 | tig0021787:-79557 | Msa1394450:CDS |
| TCGGGCAATTCGCTTCAGCC+GGG | 0.455571 | tig0021787:-79704 | Msa1394450:CDS |
| ACCAGTTATTCACACGGAAT+AGG | 0.457760 | tig0021787:-81962 | Msa1394450:CDS |
| ACATTTCAAGTCAACCGAAA+AGG | 0.458200 | tig0021787:-78408 | Msa1394450:three_prime_UTR |
| TCGGTTGACTTGAAATGTGT+TGG | 0.459493 | tig0021787:+78413 | None:intergenic |
| TATGAGGTTATGTCAGCAAA+TGG | 0.461068 | tig0021787:-79437 | Msa1394450:CDS |
| CGGTTGACTTGAAATGTGTT+GGG | 0.463168 | tig0021787:+78414 | None:intergenic |
| TCTTTGTCCTTCTAAAATTG+AGG | 0.463457 | tig0021787:-81472 | Msa1394450:CDS |
| CTAATAAGCTCATGTTCTAC+TGG | 0.464965 | tig0021787:+78330 | None:intergenic |
| TTTGAGCATCCACTTCCATC+TGG | 0.465303 | tig0021787:+78167 | None:intergenic |
| CATTTCAAGTCAACCGAAAA+GGG | 0.480333 | tig0021787:-78407 | Msa1394450:three_prime_UTR |
| CAATAAGCAACACTCCAATC+TGG | 0.481490 | tig0021787:+82479 | None:intergenic |
| CCAAGGAAAGAAATTTCATC+AGG | 0.482131 | tig0021787:+81442 | None:intergenic |
| TTGTGTGGTTGGTCATGATC+AGG | 0.484210 | tig0021787:-79546 | Msa1394450:CDS |
| AGCTTCTCCTTGCAGCAACT+GGG | 0.486330 | tig0021787:+79327 | None:intergenic |
| TCTAGGAGAATGGATATGGC+TGG | 0.492827 | tig0021787:-84958 | Msa1394450:CDS |
| TGGTTTCGTTGACGGTCTGT+TGG | 0.492958 | tig0021787:-83214 | Msa1394450:CDS |
| TGTCAACAGAACAGCAAACT+AGG | 0.493201 | tig0021787:+80047 | None:intergenic |
| CTTCATCCAGAACTGATTCA+GGG | 0.493219 | tig0021787:+79867 | None:intergenic |
| GCGCTTTGTGTGTTAACTGC+TGG | 0.494182 | tig0021787:-83279 | Msa1394450:CDS |
| TTGAATGATAAAATGGATAG+AGG | 0.494833 | tig0021787:-79638 | Msa1394450:CDS |
| TCCTTTGAAAATTCCAGAAG+AGG | 0.495496 | tig0021787:+82149 | None:intergenic |
| ACTTGAAATGTGTTGGGTCA+AGG | 0.503880 | tig0021787:+78420 | None:intergenic |
| TGCACATCATGCTGATGACC+AGG | 0.504382 | tig0021787:-82458 | Msa1394450:intron |
| TGTCAAGTTCCGGCAAATCA+AGG | 0.508502 | tig0021787:-82188 | Msa1394450:CDS |
| CTTTGATGTGAGGTCAGAAA+TGG | 0.517701 | tig0021787:+79751 | None:intergenic |
| AAGAATCTGTAAATCTATAA+CGG | 0.517946 | tig0021787:+81491 | None:intergenic |
| CGATTTAGTTGATTATGGCA+TGG | 0.518478 | tig0021787:-79606 | Msa1394450:CDS |
| TTGGCGATAATTGTCGATCA+TGG | 0.518584 | tig0021787:-83195 | Msa1394450:CDS |
| AGCTAACCAATTCTATGGTG+TGG | 0.525883 | tig0021787:+84928 | None:intergenic |
| TAACTTCATGCTTTGATGTG+AGG | 0.526260 | tig0021787:+79741 | None:intergenic |
| GGCATATGATTGAATCTGAT+TGG | 0.528374 | tig0021787:-79511 | Msa1394450:CDS |
| AGGTGTAAAAGGTGAGAAAA+CGG | 0.530607 | tig0021787:+85090 | None:intergenic |
| CTTGAAATGTGTTGGGTCAA+GGG | 0.530966 | tig0021787:+78421 | None:intergenic |
| CTCTTGCTTGATGGTGCACG+TGG | 0.531446 | tig0021787:-78593 | Msa1394450:CDS |
| CAGTAGGAATGTGTATGCAT+AGG | 0.532798 | tig0021787:+82209 | None:intergenic |
| GACCGCTTCAGGTCCAAAGT+TGG | 0.534045 | tig0021787:-79776 | Msa1394450:CDS |
| TAGAACTCGATTTCTGCCGC+TGG | 0.534683 | tig0021787:-80112 | Msa1394450:CDS |
| AGTAGGAATGTGTATGCATA+GGG | 0.538302 | tig0021787:+82210 | None:intergenic |
| GTCTGTGCCAAACACCAGAT+TGG | 0.538922 | tig0021787:-82493 | Msa1394450:CDS |
| CGGGCAATTCGCTTCAGCCG+GGG | 0.540803 | tig0021787:-79703 | Msa1394450:CDS |
| ATGTTGGTGATGACAGGAAT+AGG | 0.542172 | tig0021787:+85178 | None:intergenic |
| CAGCATGATGTATTAGGCTA+TGG | 0.543182 | tig0021787:+81688 | None:intergenic |
| CACACAAAGCGCTATACTGT+CGG | 0.544499 | tig0021787:+83290 | None:intergenic |
| AGAGTGATGTTGGTGATGAC+AGG | 0.545772 | tig0021787:+85172 | None:intergenic |
| CCGAAAATTCCACTTGGAGG+AGG | 0.546194 | tig0021787:-78562 | Msa1394450:CDS |
| TTCAAAGGAAGACATGTACA+AGG | 0.549089 | tig0021787:-82135 | Msa1394450:intron |
| AAAATCAAATTCAAATCACT+TGG | 0.549617 | tig0021787:-79927 | Msa1394450:CDS |
| CCAGAAGAGGCCGCACAAGA+AGG | 0.550475 | tig0021787:+82162 | None:intergenic |
| AACTTTGGACCTGAAGCGGT+CGG | 0.551677 | tig0021787:+79778 | None:intergenic |
| GTGTTTGCAGAGAGTGATGT+TGG | 0.552219 | tig0021787:+85162 | None:intergenic |
| GCAGTCAATGAGATTAGAAG+AGG | 0.552557 | tig0021787:+78134 | None:intergenic |
| TCCAGGACTCCAGATGGAAG+TGG | 0.552996 | tig0021787:-78176 | Msa1394450:three_prime_UTR |
| ACAAGAATGCTATTGTAGGT+TGG | 0.553354 | tig0021787:+79818 | None:intergenic |
| GGCTTCTGGTGACTGTGGCT+AGG | 0.554711 | tig0021787:+78361 | None:intergenic |
| GACCCTTTAGAACCAGGATC+CGG | 0.556740 | tig0021787:+80076 | None:intergenic |
| AAATGGAAACACGAAGATGA+TGG | 0.559024 | tig0021787:-79420 | Msa1394450:CDS |
| ATGAAGTAACAGCACTGCCC+CGG | 0.559487 | tig0021787:+79686 | None:intergenic |
| CTCCAACTTTGGACCTGAAG+CGG | 0.561562 | tig0021787:+79774 | None:intergenic |
| ACATTCCTACTGTCAAGTTC+CGG | 0.561720 | tig0021787:-82198 | Msa1394450:CDS |
| AAGCCGAAAATTCCACTTGG+AGG | 0.562305 | tig0021787:-78565 | Msa1394450:CDS |
| TACAGTGGAACAGGGTGAAG+TGG | 0.563016 | tig0021787:-85236 | Msa1394450:CDS |
| CACAGACATCATGAAAGACT+TGG | 0.563529 | tig0021787:+82509 | None:intergenic |
| GTCAATACAATTGATTACAA+AGG | 0.567176 | tig0021787:-78087 | Msa1394450:three_prime_UTR |
| TCTCGAAATAGTGGTGTGCT+TGG | 0.568705 | tig0021787:-82266 | Msa1394450:CDS |
| CCCACTCTTCGGTACCTCCT+CGG | 0.570491 | tig0021787:+82006 | None:intergenic |
| ACACAAAGCGCTATACTGTC+GGG | 0.571073 | tig0021787:+83291 | None:intergenic |
| TTGCTGTGAATAAGAAGAAG+AGG | 0.572179 | tig0021787:+85017 | None:intergenic |
| GGGAAAATCTGGGAGGTGAA+AGG | 0.573824 | tig0021787:+82230 | None:intergenic |
| CCTGTTCTGATCAATCAACA+TGG | 0.574410 | tig0021787:-79302 | Msa1394450:CDS |
| ATTTCTTTAGTGATCATCGT+GGG | 0.578132 | tig0021787:-78254 | Msa1394450:three_prime_UTR |
| ACTGCTGGTGCTAATTCTGT+TGG | 0.579854 | tig0021787:-83249 | Msa1394450:CDS |
| TTTAGTCAAGCTGGTAAAAG+GGG | 0.583206 | tig0021787:-78285 | Msa1394450:three_prime_UTR |
| TCTGTTGGCACTGACAGTAG+TGG | 0.585532 | tig0021787:-83234 | Msa1394450:CDS |
| TCAGCTTTGGGAGTCTCTGG+TGG | 0.585701 | tig0021787:-83315 | Msa1394450:intron |
| GCCGAGGAGGTACCGAAGAG+TGG | 0.590730 | tig0021787:-82007 | Msa1394450:CDS |
| ACTGCTGGATGGAAAACTGC+TGG | 0.593742 | tig0021787:-83264 | Msa1394450:CDS |
| CACTAAATATCATGATTGCA+AGG | 0.594337 | tig0021787:-78496 | Msa1394450:three_prime_UTR |
| ATTTGCCGGAACTTGACAGT+AGG | 0.595231 | tig0021787:+82193 | None:intergenic |
| AACGCGGTTACGAACAATGT+TGG | 0.598056 | tig0021787:+83146 | None:intergenic |
| GTATTGTGTTGCCGATGAGT+TGG | 0.599404 | tig0021787:-79969 | Msa1394450:CDS |
| GATTATGGCATGGATTTGAG+TGG | 0.600876 | tig0021787:-79596 | Msa1394450:CDS |
| TGGATCGATTCATGCTAACA+TGG | 0.602890 | tig0021787:-79664 | Msa1394450:CDS |
| GTTATGGCTTCTGGTGACTG+TGG | 0.602926 | tig0021787:+78356 | None:intergenic |
| TCTTCATCCAGGACTCCAGA+TGG | 0.609712 | tig0021787:-78182 | Msa1394450:three_prime_UTR |
| AAGTCTTAAAATAAATAACT+CGG | 0.610951 | tig0021787:+82289 | None:intergenic |
| CTGTGAATAAGAAGAAGAGG+AGG | 0.612612 | tig0021787:+85020 | None:intergenic |
| TAGAACCAGGATCCGGACAA+AGG | 0.612693 | tig0021787:+80083 | None:intergenic |
| ACACTGGCATAGTGCAGACA+TGG | 0.614739 | tig0021787:+79386 | None:intergenic |
| TATAAGCCGAAAATTCCACT+TGG | 0.618772 | tig0021787:-78568 | Msa1394450:CDS |
| CTGAAGCGAATTGCCCGAAG+TGG | 0.618867 | tig0021787:+79709 | None:intergenic |
| CTGACCTAGACACTTCATGC+AGG | 0.621380 | tig0021787:-83029 | Msa1394450:intron |
| AATCAATCCCAGTTGCTGCA+AGG | 0.623665 | tig0021787:-79334 | Msa1394450:CDS |
| GAGCTATGACCTCCTCCAAG+TGG | 0.626735 | tig0021787:+78553 | None:intergenic |
| TTTGTGTGTTAACTGCTGGA+TGG | 0.627514 | tig0021787:-83275 | Msa1394450:CDS |
| TCACACGGAATAGGATACGA+AGG | 0.630977 | tig0021787:-81953 | Msa1394450:CDS |
| CATAAGTACCTGCAAGACCA+AGG | 0.631073 | tig0021787:+81425 | None:intergenic |
| ACTCTGGACCCTTTAGAACC+AGG | 0.631377 | tig0021787:+80070 | None:intergenic |
| CCGAGGAGGTACCGAAGAGT+GGG | 0.632247 | tig0021787:-82006 | Msa1394450:CDS |
| GTGCCATAACCTCTTTCAGT+CGG | 0.638556 | tig0021787:+85205 | None:intergenic |
| CATGGTGATGAAACAGAGGA+AGG | 0.639486 | tig0021787:+85060 | None:intergenic |
| CTGAAAGAGGTTATGGCACG+AGG | 0.643350 | tig0021787:-85201 | Msa1394450:CDS |
| TTATCTTCACAGATATGCCG+AGG | 0.643407 | tig0021787:-82023 | Msa1394450:intron |
| ATGATCAGGTTCTTGAAGTG+CGG | 0.645433 | tig0021787:-79532 | Msa1394450:CDS |
| ATCAAAACCAGTTATTCACA+CGG | 0.663399 | tig0021787:-81968 | Msa1394450:CDS |
| TAGCCTAATACATCATGCTG+TGG | 0.665156 | tig0021787:-81685 | Msa1394450:CDS |
| GAAATGTGTTGGGTCAAGGG+TGG | 0.666291 | tig0021787:+78424 | None:intergenic |
| GAACACACTGTGAAGCAACA+TGG | 0.669432 | tig0021787:+85042 | None:intergenic |
| GGAAGTGGATGCTCAAATTG+TGG | 0.671678 | tig0021787:-78161 | Msa1394450:three_prime_UTR |
| GCAACATGGTGATGAAACAG+AGG | 0.672809 | tig0021787:+85056 | None:intergenic |
| ATCAAGGCATCCTTCTTGTG+CGG | 0.673151 | tig0021787:-82172 | Msa1394450:CDS |
| TAGAACATGAGCTTATTAGA+CGG | 0.673295 | tig0021787:-78326 | Msa1394450:three_prime_UTR |
| TGTATGCATAGGGAAAATCT+GGG | 0.676324 | tig0021787:+82220 | None:intergenic |
| CACACGGAATAGGATACGAA+GGG | 0.678715 | tig0021787:-81952 | Msa1394450:CDS |
| CGGACAAAGGTAACAACCAG+CGG | 0.685318 | tig0021787:+80096 | None:intergenic |
| GATCACTAAAGAAATCTCGA+TGG | 0.689060 | tig0021787:+78262 | None:intergenic |
| TAACAAAGTACAGTGGAACA+GGG | 0.701130 | tig0021787:-85244 | Msa1394450:CDS |
| TGTTTGGTAACAAAGTACAG+TGG | 0.704782 | tig0021787:-85251 | Msa1394450:CDS |
| GATTTCTTTAGTGATCATCG+TGG | 0.705115 | tig0021787:-78255 | Msa1394450:three_prime_UTR |
| ACCCACCCATTTGAGAAACG+CGG | 0.710609 | tig0021787:+83130 | None:intergenic |
| TCTTCACAGATATGCCGAGG+AGG | 0.719122 | tig0021787:-82020 | Msa1394450:intron |
| ACGTGCAGAGAGTAAAGACG+AGG | 0.743127 | tig0021787:-83169 | Msa1394450:CDS |
| ATGCATAGGGAAAATCTGGG+AGG | 0.764660 | tig0021787:+82223 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAAAAATTTAATCTTTTA+TGG | - | tig0021787:78375-78394 | Msa1394450:three_prime_UTR | 10.0% |
| !!! | AGAAAAATTTAATCTTTTAT+GGG | - | tig0021787:78376-78395 | Msa1394450:three_prime_UTR | 10.0% |
| !! | AGAAAAATTTAATCTTTATT+GGG | - | tig0021787:78998-79017 | Msa1394450:intron | 10.0% |
| !!! | TCTTATTTTTTTGTTTTTTA+AGG | + | tig0021787:82725-82744 | None:intergenic | 10.0% |
| !! | AAAAAACAAAAAAATAAGAT+TGG | - | tig0021787:82726-82745 | Msa1394450:intron | 10.0% |
| !! | CAGAAAAATTTAATCTTTAT+TGG | - | tig0021787:78997-79016 | Msa1394450:intron | 15.0% |
| !! | TAAGATATTGATATAACAAA+AGG | - | tig0021787:79217-79236 | Msa1394450:intron | 15.0% |
| !! | AAGTCTTAAAATAAATAACT+CGG | + | tig0021787:80959-80978 | None:intergenic | 15.0% |
| !!! | TTTTCTGGTTTTAATAATAT+GGG | - | tig0021787:81413-81432 | Msa1394450:intron | 15.0% |
| !! | AATTGTAAAAGTTATAATGA+AGG | + | tig0021787:82397-82416 | None:intergenic | 15.0% |
| !!! | ATCCTCTTTTTTTTTTTTTT+TGG | + | tig0021787:82657-82676 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTTTTTAAGGTT+GGG | + | tig0021787:82720-82739 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTTTTTAAGGT+TGG | + | tig0021787:82721-82740 | None:intergenic | 15.0% |
| !!! | TCCACTTTTTTAATTATTAT+CGG | - | tig0021787:83011-83030 | Msa1394450:intron | 15.0% |
| !! | AGTTAATTATCAAGAAATAT+CGG | + | tig0021787:84097-84116 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAAATTGAAG+TGG | + | tig0021787:84207-84226 | None:intergenic | 15.0% |
| !! | TTAACTCCAATAATTATTAT+TGG | - | tig0021787:84432-84451 | Msa1394450:intron | 15.0% |
| !! | TTTCTTAGTAAAATATGATT+TGG | - | tig0021787:85136-85155 | Msa1394450:CDS | 15.0% |
| !!! | TGTTTTGCTATTTTAAATTT+TGG | + | tig0021787:85235-85254 | None:intergenic | 15.0% |
| !!! | AAAGTTTGAAACTTTTTGAT+GGG | + | tig0021787:78133-78152 | None:intergenic | 20.0% |
| !!! | AATATAGACAAGTTTTTTCT+AGG | - | tig0021787:78270-78289 | Msa1394450:three_prime_UTR | 20.0% |
| !!! | ATTTTGAAAAAGTGATTTGA+AGG | - | tig0021787:78726-78745 | Msa1394450:intron | 20.0% |
| !!! | TATATAGATTTTGACATGTT+TGG | + | tig0021787:78910-78929 | None:intergenic | 20.0% |
| !!! | GTTTTGTTATTTGTACAATT+TGG | - | tig0021787:79023-79042 | Msa1394450:intron | 20.0% |
| !! | CTTATAACATTAAGTATTTG+TGG | - | tig0021787:79193-79212 | Msa1394450:intron | 20.0% |
| !! | TGCAAAATAGTTTATGAATA+AGG | - | tig0021787:79759-79778 | Msa1394450:CDS | 20.0% |
| !! | TGTCGTGTTAATAAAATATT+AGG | - | tig0021787:80338-80357 | Msa1394450:intron | 20.0% |
| !! | TTCATTTGTAATTGCTAATA+AGG | - | tig0021787:80414-80433 | Msa1394450:intron | 20.0% |
| !!! | AACGATATAAATAGTGTTTT+TGG | - | tig0021787:80513-80532 | Msa1394450:intron | 20.0% |
| !!! | CTTTTCTGGTTTTAATAATA+TGG | - | tig0021787:81412-81431 | Msa1394450:intron | 20.0% |
| !! | ACATAAAGTAGAATTCAAAT+AGG | + | tig0021787:81637-81656 | None:intergenic | 20.0% |
| !! | GTTTATATAATTGCATTCTA+TGG | - | tig0021787:81676-81695 | Msa1394450:CDS | 20.0% |
| !! | AAGAATCTGTAAATCTATAA+CGG | + | tig0021787:81757-81776 | None:intergenic | 20.0% |
| !! | CAAATTGAAAAACTAAAGTA+CGG | - | tig0021787:82173-82192 | Msa1394450:CDS | 20.0% |
| !! | AAATTGAAAAACTAAAGTAC+GGG | - | tig0021787:82174-82193 | Msa1394450:CDS | 20.0% |
| !!! | TTTTTTTTTTGGAGAAAATG+AGG | + | tig0021787:82646-82665 | None:intergenic | 20.0% |
| !! | CTCCAAAAAAAAAAAAAAAG+AGG | - | tig0021787:82652-82671 | Msa1394450:intron | 20.0% |
| !!! | TGAAATTGTATGATAATGTT+AGG | + | tig0021787:82890-82909 | None:intergenic | 20.0% |
| !! | AAAATCAAATTCAAATCACT+TGG | - | tig0021787:83318-83337 | Msa1394450:intron | 20.0% |
| !! | AAAATTGTGTTATGATTACA+TGG | + | tig0021787:84375-84394 | None:intergenic | 20.0% |
| !! | TAGACACCAATAATAATTAT+TGG | + | tig0021787:84441-84460 | None:intergenic | 20.0% |
| !! | TAAGCATTAAATTATTAGAG+AGG | + | tig0021787:84534-84553 | None:intergenic | 20.0% |
| !!! | TAAATTTTCTCACTTCAAAT+TGG | + | tig0021787:84795-84814 | None:intergenic | 20.0% |
| !!! | GAAAGTTTGAAACTTTTTGA+TGG | + | tig0021787:78134-78153 | None:intergenic | 25.0% |
| ! | AAAAAAGCTAACCAATTCTA+TGG | + | tig0021787:78325-78344 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTTTGTGTGATT+TGG | - | tig0021787:78401-78420 | Msa1394450:three_prime_UTR | 25.0% |
| ! | AACTACACATACAACAAAAA+GGG | + | tig0021787:78433-78452 | None:intergenic | 25.0% |
| ! | AAACTACACATACAACAAAA+AGG | + | tig0021787:78434-78453 | None:intergenic | 25.0% |
| ! | AAGTTAGAATCAAATCTTAG+AGG | - | tig0021787:78859-78878 | Msa1394450:intron | 25.0% |
| !! | AGATTAAATTTTTCTGTGTG+AGG | + | tig0021787:78993-79012 | None:intergenic | 25.0% |
| ! | AGCTACACATATAACAAAAA+GGG | + | tig0021787:79055-79074 | None:intergenic | 25.0% |
| ! | AAGCTACACATATAACAAAA+AGG | + | tig0021787:79056-79075 | None:intergenic | 25.0% |
| ! | CATTTGGAAAAGCTTATTTA+AGG | - | tig0021787:79136-79155 | Msa1394450:intron | 25.0% |
| !! | TAATCGAATATTTTGCATAC+TGG | + | tig0021787:79361-79380 | None:intergenic | 25.0% |
| !!! | ACATAGCTATAAGTTGTTTT+CGG | - | tig0021787:79380-79399 | Msa1394450:CDS | 25.0% |
| ! | GTTTATTAGAGCTTATCTAT+TGG | + | tig0021787:79710-79729 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCTTTTTCTCTC+TGG | - | tig0021787:79865-79884 | Msa1394450:CDS | 25.0% |
| ! | ACAGAAAACATGAAAGTAAA+CGG | - | tig0021787:80638-80657 | Msa1394450:intron | 25.0% |
| !!! | ATTGTGGATTTTAACTTCTT+TGG | - | tig0021787:80703-80722 | Msa1394450:intron | 25.0% |
| !!! | TTTTAACTTCTTTGGACTTT+AGG | - | tig0021787:80711-80730 | Msa1394450:intron | 25.0% |
| ! | AGTCTCGTTTGAAAATAATA+TGG | + | tig0021787:80854-80873 | None:intergenic | 25.0% |
| ! | AAACGAGACTAAAATAAGAT+TGG | - | tig0021787:80864-80883 | Msa1394450:intron | 25.0% |
| !! | GGAGAAAATTGAATTTTTGA+AGG | - | tig0021787:80885-80904 | Msa1394450:intron | 25.0% |
| ! | TAAACATTCCAATAAGAGAT+GGG | + | tig0021787:81178-81197 | None:intergenic | 25.0% |
| !!! | ATAACTGGTTTTGATTTGTT+GGG | + | tig0021787:81272-81291 | None:intergenic | 25.0% |
| !!! | AATAACTGGTTTTGATTTGT+TGG | + | tig0021787:81273-81292 | None:intergenic | 25.0% |
| ! | TTAAAACCAGAAAAGAATGT+TGG | + | tig0021787:81407-81426 | None:intergenic | 25.0% |
| ! | TTAATAATATGGGTGAGTAA+TGG | - | tig0021787:81423-81442 | Msa1394450:intron | 25.0% |
| ! | AAACCATCATTTGAATAACT+CGG | + | tig0021787:81451-81470 | None:intergenic | 25.0% |
| ! | TTTCTCAAAAAACAAAGCTA+CGG | - | tig0021787:82041-82060 | Msa1394450:intron | 25.0% |
| !!! | TTTAGCGTCGTAATTTTTTT+GGG | + | tig0021787:82148-82167 | None:intergenic | 25.0% |
| !! | TTTTAGCGTCGTAATTTTTT+TGG | + | tig0021787:82149-82168 | None:intergenic | 25.0% |
| !!! | CGTACTTTAGTTTTTCAATT+TGG | + | tig0021787:82175-82194 | None:intergenic | 25.0% |
| ! | CTTAATATCTATGCATGAAT+AGG | - | tig0021787:82203-82222 | Msa1394450:CDS | 25.0% |
| ! | TAAATAGATTTACCTTGCAT+GGG | + | tig0021787:82850-82869 | None:intergenic | 25.0% |
| ! | GCCGATAATAATTAAAAAAG+TGG | + | tig0021787:83015-83034 | None:intergenic | 25.0% |
| ! | ATAGTTAAAAACACTGACAT+TGG | + | tig0021787:83059-83078 | None:intergenic | 25.0% |
| !! | TATAATCTTTTCCAACTCAT+CGG | + | tig0021787:83290-83309 | None:intergenic | 25.0% |
| ! | ATGGAAGTTGAATGATAAAA+TGG | - | tig0021787:83600-83619 | Msa1394450:intron | 25.0% |
| ! | TTGAATGATAAAATGGATAG+AGG | - | tig0021787:83607-83626 | Msa1394450:intron | 25.0% |
| !!! | GATTGATTTTAACAAAACGA+GGG | + | tig0021787:83899-83918 | None:intergenic | 25.0% |
| !! | AATTGTCCTATTTTATCTGT+AGG | - | tig0021787:84036-84055 | Msa1394450:intron | 25.0% |
| ! | CTTATTCCTACAGATAAAAT+AGG | + | tig0021787:84045-84064 | None:intergenic | 25.0% |
| ! | GTCAATACAATTGATTACAA+AGG | - | tig0021787:85158-85177 | Msa1394450:CDS | 25.0% |
| !!! | GAAACTTTTTGATGGGTTTT+TGG | + | tig0021787:78126-78145 | None:intergenic | 30.0% |
| !!! | ACAAGTTTTTTCTAGGAGAA+TGG | - | tig0021787:78277-78296 | Msa1394450:three_prime_UTR | 30.0% |
| !! | TTTTTCTAGGAGAATGGATA+TGG | - | tig0021787:78283-78302 | Msa1394450:three_prime_UTR | 30.0% |
| ! | GTAGTTTTTGTTAGAATCCA+AGG | - | tig0021787:78447-78466 | Msa1394450:three_prime_UTR | 30.0% |
| !! | CATCATATTGACTTTAACCT+TGG | + | tig0021787:78467-78486 | None:intergenic | 30.0% |
| CAAGGTTAAAGTCAATATGA+TGG | - | tig0021787:78465-78484 | Msa1394450:three_prime_UTR | 30.0% | |
| AAGAACAATGTGATGGTAAA+TGG | - | tig0021787:78597-78616 | Msa1394450:CDS | 30.0% | |
| ATGGTAAATGGTTGTATGTT+TGG | - | tig0021787:78609-78628 | Msa1394450:CDS | 30.0% | |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | - | tig0021787:78621-78640 | Msa1394450:intron | 30.0% |
| ! | GAAGACAAAATTGATTCTAG+AGG | - | tig0021787:78645-78664 | Msa1394450:intron | 30.0% |
| AAGGTGAAGTGATTTATGTT+TGG | - | tig0021787:78745-78764 | Msa1394450:intron | 30.0% | |
| TCTAACTTGAAGCTAGAAAT+TGG | + | tig0021787:78847-78866 | None:intergenic | 30.0% | |
| !! | CATCATATTGACTTTAAGCT+TGG | + | tig0021787:79089-79108 | None:intergenic | 30.0% |
| CAAGCTTAAAGTCAATATGA+TGG | - | tig0021787:79087-79106 | Msa1394450:intron | 30.0% | |
| ! | TTTTAGCACATTGAGTCATT+TGG | - | tig0021787:79120-79139 | Msa1394450:intron | 30.0% |
| !! | GAAACAACTTACTGCTTTTA+TGG | + | tig0021787:79264-79283 | None:intergenic | 30.0% |
| !! | AGACTTTTTGAGAGAGTTTA+CGG | + | tig0021787:79286-79305 | None:intergenic | 30.0% |
| !! | GAATATTTTGCATACTGGTT+TGG | + | tig0021787:79356-79375 | None:intergenic | 30.0% |
| TAATTAAGCGCTTATAGCAT+AGG | - | tig0021787:79479-79498 | Msa1394450:CDS | 30.0% | |
| !!! | GCTACTTTTATAAGTTATCC+TGG | - | tig0021787:79585-79604 | Msa1394450:CDS | 30.0% |
| ! | AAACTATTTTGCAAGAAGTC+TGG | + | tig0021787:79752-79771 | None:intergenic | 30.0% |
| !! | GTCTAAATTTGGCTGTTTTA+TGG | - | tig0021787:80136-80155 | Msa1394450:intron | 30.0% |
| GTGAGATTGTTAATTGTGAT+TGG | - | tig0021787:80247-80266 | Msa1394450:intron | 30.0% | |
| ! | CCATTTTCAGTTCAACTTAT+AGG | + | tig0021787:80616-80635 | None:intergenic | 30.0% |
| ! | CCTATAAGTTGAACTGAAAA+TGG | - | tig0021787:80613-80632 | Msa1394450:intron | 30.0% |
| CAGAAAACATGAAAGTAAAC+GGG | - | tig0021787:80639-80658 | Msa1394450:intron | 30.0% | |
| !! | AAAGTATTGCCAATTAAACC+TGG | + | tig0021787:80808-80827 | None:intergenic | 30.0% |
| ! | TCATTTCTGAGAAATTATGC+AGG | - | tig0021787:80933-80952 | Msa1394450:intron | 30.0% |
| TTAAGACTTTCTCGAAATAG+TGG | - | tig0021787:80970-80989 | Msa1394450:intron | 30.0% | |
| !!! | CATTTTTTCCCATCTCTTAT+TGG | - | tig0021787:81167-81186 | Msa1394450:intron | 30.0% |
| GTAAACATTCCAATAAGAGA+TGG | + | tig0021787:81179-81198 | None:intergenic | 30.0% | |
| ATCAAAACCAGTTATTCACA+CGG | - | tig0021787:81277-81296 | Msa1394450:intron | 30.0% | |
| AAGTCATTGTTAAGTTCTTC+TGG | - | tig0021787:81381-81400 | Msa1394450:intron | 30.0% | |
| ATTCTACTTTATGTTGAGTG+TGG | - | tig0021787:81643-81662 | Msa1394450:intron | 30.0% | |
| ATAACCAATATCGTAGAATC+AGG | + | tig0021787:81716-81735 | None:intergenic | 30.0% | |
| !!! | TATTGGTTATTTTTGCAGCA+TGG | - | tig0021787:81726-81745 | Msa1394450:CDS | 30.0% |
| !! | TCTTTGTCCTTCTAAAATTG+AGG | - | tig0021787:81773-81792 | Msa1394450:intron | 30.0% |
| GAGTATGCACATACAAATAA+AGG | + | tig0021787:81878-81897 | None:intergenic | 30.0% | |
| TTCTCAAAAAACAAAGCTAC+GGG | - | tig0021787:82042-82061 | Msa1394450:intron | 30.0% | |
| AATAGTGATATTGGCACTAT+TGG | + | tig0021787:82241-82260 | None:intergenic | 30.0% | |
| ! | TAGTCTTTTTACTGAAGATG+AGG | + | tig0021787:82269-82288 | None:intergenic | 30.0% |
| GAAACAATAATGTGGGATAT+TGG | + | tig0021787:82373-82392 | None:intergenic | 30.0% | |
| TGAAGGAGAAACAATAATGT+GGG | + | tig0021787:82380-82399 | None:intergenic | 30.0% | |
| ATGAAGGAGAAACAATAATG+TGG | + | tig0021787:82381-82400 | None:intergenic | 30.0% | |
| ! | ACTAAATCTTCTGCTCTTTT+AGG | - | tig0021787:82451-82470 | Msa1394450:intron | 30.0% |
| AACTCAAACTTGAGAGAAAT+TGG | + | tig0021787:82574-82593 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTAAGGTTGGGTA+CGG | + | tig0021787:82715-82734 | None:intergenic | 30.0% |
| ! | AAAATAAGATTGGTGCTTCA+TGG | - | tig0021787:82736-82755 | Msa1394450:intron | 30.0% |
| GTAAATAGATTTACCTTGCA+TGG | + | tig0021787:82851-82870 | None:intergenic | 30.0% | |
| ! | CATTGCTTTACCTTTAAAGA+TGG | - | tig0021787:83219-83238 | Msa1394450:CDS | 30.0% |
| TCAGCAAATTCCATCTTTAA+AGG | + | tig0021787:83232-83251 | None:intergenic | 30.0% | |
| CTTTCCGATTTAGTTGATTA+TGG | - | tig0021787:83634-83653 | Msa1394450:intron | 30.0% | |
| CATGCCATAATCAACTAAAT+CGG | + | tig0021787:83641-83660 | None:intergenic | 30.0% | |
| ! | CTCATATTCTGTGAAGTTTT+TGG | + | tig0021787:83794-83813 | None:intergenic | 30.0% |
| CAAAAACTTCACAGAATATG+AGG | - | tig0021787:83792-83811 | Msa1394450:intron | 30.0% | |
| !! | GGATTGATTTTAACAAAACG+AGG | + | tig0021787:83900-83919 | None:intergenic | 30.0% |
| GAATAAGTTACAGTTGCAAT+TGG | - | tig0021787:84058-84077 | Msa1394450:intron | 30.0% | |
| CTTCATCGTATATAAAACCA+AGG | + | tig0021787:84347-84366 | None:intergenic | 30.0% | |
| ATTGTGTTATGATTACATGG+AGG | + | tig0021787:84372-84391 | None:intergenic | 30.0% | |
| CACTAAATATCATGATTGCA+AGG | - | tig0021787:84749-84768 | Msa1394450:intron | 30.0% | |
| ! | TCATGATTGCAAGGATATTT+TGG | - | tig0021787:84758-84777 | Msa1394450:intron | 30.0% |
| TAGAACATGAGCTTATTAGA+CGG | - | tig0021787:84919-84938 | Msa1394450:intron | 30.0% | |
| ! | TTTTAGTCAAGCTGGTAAAA+GGG | - | tig0021787:84959-84978 | Msa1394450:CDS | 30.0% |
| ATTTCTTTAGTGATCATCGT+GGG | - | tig0021787:84991-85010 | Msa1394450:CDS | 30.0% | |
| GATGCTTAACATGATCTATA+AGG | - | tig0021787:85015-85034 | Msa1394450:CDS | 30.0% | |
| GATCTATAAGGAATGTAGAT+TGG | - | tig0021787:85027-85046 | Msa1394450:CDS | 30.0% | |
| ! | TGTTTGGTAACAAAGTACAG+TGG | - | tig0021787:77994-78013 | Msa1394450:three_prime_UTR | 35.0% |
| TAACAAAGTACAGTGGAACA+GGG | - | tig0021787:78001-78020 | Msa1394450:three_prime_UTR | 35.0% | |
| !!! | TTTTGATGGGTTTTTGGAGA+AGG | + | tig0021787:78120-78139 | None:intergenic | 35.0% |
| AGGTGTAAAAGGTGAGAAAA+CGG | + | tig0021787:78158-78177 | None:intergenic | 35.0% | |
| !!! | AAGGTTTTGGAAGGTGTAAA+AGG | + | tig0021787:78169-78188 | None:intergenic | 35.0% |
| TTGCTGTGAATAAGAAGAAG+AGG | + | tig0021787:78231-78250 | None:intergenic | 35.0% | |
| ACAGCAATGCTCAATTGATA+TGG | - | tig0021787:78244-78263 | Msa1394450:three_prime_UTR | 35.0% | |
| ATCAAACCACACCATAGAAT+TGG | - | tig0021787:78311-78330 | Msa1394450:three_prime_UTR | 35.0% | |
| TTTCCTATCACTCTTGTTCA+TGG | - | tig0021787:78345-78364 | Msa1394450:three_prime_UTR | 35.0% | |
| !!! | ATTTTGCTATTTGTGCTGCT+TGG | - | tig0021787:78533-78552 | Msa1394450:exon | 35.0% |
| CAAGCTTAAGAACAATGTGA+TGG | - | tig0021787:78590-78609 | Msa1394450:CDS | 35.0% | |
| AAATCAATTCTTGTCACCAC+CGG | + | tig0021787:78695-78714 | None:intergenic | 35.0% | |
| ! | TATACCTCGAGAGTCAATTT+TGG | - | tig0021787:78926-78945 | Msa1394450:intron | 35.0% |
| ! | AGCTTATTTAAGGCTCTGTT+TGG | - | tig0021787:79146-79165 | Msa1394450:intron | 35.0% |
| !!! | AGTTGCTTTTAGTCTCTGTT+TGG | - | tig0021787:79446-79465 | Msa1394450:CDS | 35.0% |
| CTTATTTCAATATGCTCTCC+AGG | + | tig0021787:79606-79625 | None:intergenic | 35.0% | |
| !! | TGGTCTATAAAGCTTTGGAT+TGG | + | tig0021787:79732-79751 | None:intergenic | 35.0% |
| AAGTCTGGTCTATAAAGCTT+TGG | + | tig0021787:79737-79756 | None:intergenic | 35.0% | |
| TTCTTTGCATCACTAGCATA+CGG | + | tig0021787:79841-79860 | None:intergenic | 35.0% | |
| !! | TCTTGCAATTGACCTTGTTT+TGG | + | tig0021787:80285-80304 | None:intergenic | 35.0% |
| GTGTTCTCAGAAAATAAACG+AGG | + | tig0021787:80364-80383 | None:intergenic | 35.0% | |
| ATGTAGTGAACAGTTGTGAT+AGG | - | tig0021787:80450-80469 | Msa1394450:intron | 35.0% | |
| TGTAGTGAACAGTTGTGATA+GGG | - | tig0021787:80451-80470 | Msa1394450:intron | 35.0% | |
| TCGATAAAGTGTGCTAATTG+TGG | - | tig0021787:80687-80706 | Msa1394450:intron | 35.0% | |
| TGTATGCATAGGGAAAATCT+GGG | + | tig0021787:81028-81047 | None:intergenic | 35.0% | |
| AGTAGGAATGTGTATGCATA+GGG | + | tig0021787:81038-81057 | None:intergenic | 35.0% | |
| ! | TCCTTTGAAAATTCCAGAAG+AGG | + | tig0021787:81099-81118 | None:intergenic | 35.0% |
| TTCAAAGGAAGACATGTACA+AGG | - | tig0021787:81110-81129 | Msa1394450:intron | 35.0% | |
| TAACCACAGCATGATGTATT+AGG | + | tig0021787:81566-81585 | None:intergenic | 35.0% | |
| ! | CACATGTCCTCAATTTTAGA+AGG | + | tig0021787:81783-81802 | None:intergenic | 35.0% |
| CCAAGGAAAGAAATTTCATC+AGG | + | tig0021787:81806-81825 | None:intergenic | 35.0% | |
| CCTGATGAAATTTCTTTCCT+TGG | - | tig0021787:81803-81822 | Msa1394450:intron | 35.0% | |
| CTTATTTGCTTCTGTCTTTG+TGG | + | tig0021787:81944-81963 | None:intergenic | 35.0% | |
| CAAAGACAGAAGCAAATAAG+AGG | - | tig0021787:81944-81963 | Msa1394450:CDS | 35.0% | |
| GAGGAAGGAAATAGTGATAT+TGG | + | tig0021787:82250-82269 | None:intergenic | 35.0% | |
| ! | CTTTTTACTGAAGATGAGGA+AGG | + | tig0021787:82265-82284 | None:intergenic | 35.0% |
| GATGAATGGAATCTATCTGA+CGG | + | tig0021787:82346-82365 | None:intergenic | 35.0% | |
| ACAATAATGTGGGATATTGG+TGG | + | tig0021787:82370-82389 | None:intergenic | 35.0% | |
| CGAGTTCTACAGCATAATTA+TGG | + | tig0021787:83122-83141 | None:intergenic | 35.0% | |
| ACAAGAATGCTATTGTAGGT+TGG | + | tig0021787:83430-83449 | None:intergenic | 35.0% | |
| CAGTACAAGAATGCTATTGT+AGG | + | tig0021787:83434-83453 | None:intergenic | 35.0% | |
| TAACTTCATGCTTTGATGTG+AGG | + | tig0021787:83507-83526 | None:intergenic | 35.0% | |
| ! | AGTTAAAAATGCTGCCACTT+CGG | - | tig0021787:83522-83541 | Msa1394450:intron | 35.0% |
| CGATTTAGTTGATTATGGCA+TGG | - | tig0021787:83639-83658 | Msa1394450:intron | 35.0% | |
| GGCATATGATTGAATCTGAT+TGG | - | tig0021787:83734-83753 | Msa1394450:intron | 35.0% | |
| TATGAGGTTATGTCAGCAAA+TGG | - | tig0021787:83808-83827 | Msa1394450:intron | 35.0% | |
| AAATGGAAACACGAAGATGA+TGG | - | tig0021787:83825-83844 | Msa1394450:intron | 35.0% | |
| AGTAAGAGAGGTTAACTTAC+TGG | + | tig0021787:83985-84004 | None:intergenic | 35.0% | |
| AATCGCTATGATAGTAAGAG+AGG | + | tig0021787:83997-84016 | None:intergenic | 35.0% | |
| !! | CAATCTATGAAGCATTGACA+TGG | + | tig0021787:84490-84509 | None:intergenic | 35.0% |
| AGAGGATGTGATCTGATTAT+TGG | + | tig0021787:84516-84535 | None:intergenic | 35.0% | |
| TATAAGCCGAAAATTCCACT+TGG | - | tig0021787:84677-84696 | Msa1394450:intron | 35.0% | |
| AGGTCATAGCTCATTCATAT+AGG | - | tig0021787:84703-84722 | Msa1394450:intron | 35.0% | |
| GGTCATAGCTCATTCATATA+GGG | - | tig0021787:84704-84723 | Msa1394450:intron | 35.0% | |
| !! | TGATTGCAAGGATATTTTGG+TGG | - | tig0021787:84761-84780 | Msa1394450:intron | 35.0% |
| ! | ACATTTCAAGTCAACCGAAA+AGG | - | tig0021787:84837-84856 | Msa1394450:intron | 35.0% |
| ! | CATTTCAAGTCAACCGAAAA+GGG | - | tig0021787:84838-84857 | Msa1394450:intron | 35.0% |
| CTAATAAGCTCATGTTCTAC+TGG | + | tig0021787:84918-84937 | None:intergenic | 35.0% | |
| ! | CTTTTACCAGCTTGACTAAA+AGG | + | tig0021787:84960-84979 | None:intergenic | 35.0% |
| ! | CTTTTAGTCAAGCTGGTAAA+AGG | - | tig0021787:84958-84977 | Msa1394450:CDS | 35.0% |
| TTTAGTCAAGCTGGTAAAAG+GGG | - | tig0021787:84960-84979 | Msa1394450:CDS | 35.0% | |
| GATCACTAAAGAAATCTCGA+TGG | + | tig0021787:84986-85005 | None:intergenic | 35.0% | |
| GATTTCTTTAGTGATCATCG+TGG | - | tig0021787:84990-85009 | Msa1394450:CDS | 35.0% | |
| TTTGTTCATGTTCTTCATCC+AGG | - | tig0021787:85052-85071 | Msa1394450:CDS | 35.0% | |
| GTAACAAAGTACAGTGGAAC+AGG | - | tig0021787:78000-78019 | Msa1394450:three_prime_UTR | 40.0% | |
| ! | GTTTTTGTTCCGACTGAAAG+AGG | - | tig0021787:78031-78050 | Msa1394450:three_prime_UTR | 40.0% |
| !! | ATGTTGGTGATGACAGGAAT+AGG | + | tig0021787:78070-78089 | None:intergenic | 40.0% |
| !!! | AAACAGAGGAAGGTTTTGGA+AGG | + | tig0021787:78178-78197 | None:intergenic | 40.0% |
| ! | GATGAAACAGAGGAAGGTTT+TGG | + | tig0021787:78182-78201 | None:intergenic | 40.0% |
| CTGTGAATAAGAAGAAGAGG+AGG | + | tig0021787:78228-78247 | None:intergenic | 40.0% | |
| AGCTAACCAATTCTATGGTG+TGG | + | tig0021787:78320-78339 | None:intergenic | 40.0% | |
| TGACCATGAACAAGAGTGAT+AGG | + | tig0021787:78351-78370 | None:intergenic | 40.0% | |
| TGTAGAGATGTTCTCGTGTT+TGG | - | tig0021787:78668-78687 | Msa1394450:intron | 40.0% | |
| !!! | AATTTTGGCTCCTTCAGAAG+TGG | - | tig0021787:78941-78960 | Msa1394450:intron | 40.0% |
| ! | ATGTTTGGTTCCACTTCTGA+AGG | + | tig0021787:78954-78973 | None:intergenic | 40.0% |
| ! | TGAACCAAGAAGGGTATGTT+TGG | + | tig0021787:78969-78988 | None:intergenic | 40.0% |
| AAGCACTTGTGAGACTGTTT+GGG | + | tig0021787:79684-79703 | None:intergenic | 40.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | + | tig0021787:79685-79704 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCCTGTCAGCTTT+GGG | - | tig0021787:79918-79937 | Msa1394450:CDS | 40.0% |
| TTTGTGTGTTAACTGCTGGA+TGG | - | tig0021787:79970-79989 | Msa1394450:CDS | 40.0% | |
| TTGGCGATAATTGTCGATCA+TGG | - | tig0021787:80050-80069 | Msa1394450:CDS | 40.0% | |
| CAAATGGGTGGGTCTAAATT+TGG | - | tig0021787:80125-80144 | Msa1394450:intron | 40.0% | |
| ! | GTTAATTGTGATTGGCCAAG+TGG | - | tig0021787:80255-80274 | Msa1394450:intron | 40.0% |
| GAGAAGATGAAAGAGAAGCT+AGG | - | tig0021787:80473-80492 | Msa1394450:intron | 40.0% | |
| TTCCCAGCACAAACATCTAA+GGG | + | tig0021787:80665-80684 | None:intergenic | 40.0% | |
| ATTCCCAGCACAAACATCTA+AGG | + | tig0021787:80666-80685 | None:intergenic | 40.0% | |
| CACAGACATCATGAAAGACT+TGG | + | tig0021787:80739-80758 | None:intergenic | 40.0% | |
| CAATAAGCAACACTCCAATC+TGG | + | tig0021787:80769-80788 | None:intergenic | 40.0% | |
| TGCTGATGACCAGGTTTAAT+TGG | - | tig0021787:80796-80815 | Msa1394450:intron | 40.0% | |
| GTGTATGCATAGGGAAAATC+TGG | + | tig0021787:81029-81048 | None:intergenic | 40.0% | |
| CAGTAGGAATGTGTATGCAT+AGG | + | tig0021787:81039-81058 | None:intergenic | 40.0% | |
| ACATTCCTACTGTCAAGTTC+CGG | - | tig0021787:81047-81066 | Msa1394450:intron | 40.0% | |
| !!! | GCCTCTTCTGGAATTTTCAA+AGG | - | tig0021787:81095-81114 | Msa1394450:intron | 40.0% |
| AAGGAAGACATGTACAAGGT+TGG | - | tig0021787:81114-81133 | Msa1394450:intron | 40.0% | |
| TTATCTTCACAGATATGCCG+AGG | - | tig0021787:81222-81241 | Msa1394450:intron | 40.0% | |
| ACCAGTTATTCACACGGAAT+AGG | - | tig0021787:81283-81302 | Msa1394450:intron | 40.0% | |
| TCCTATTCCGTGTGAATAAC+TGG | + | tig0021787:81287-81306 | None:intergenic | 40.0% | |
| ! | TTCTGGCCAACATTCTTTTC+TGG | - | tig0021787:81398-81417 | Msa1394450:intron | 40.0% |
| GCTCCGAGTTATTCAAATGA+TGG | - | tig0021787:81445-81464 | Msa1394450:CDS | 40.0% | |
| GACATGCAGAAATCACTCTT+TGG | + | tig0021787:81506-81525 | None:intergenic | 40.0% | |
| CAGCATGATGTATTAGGCTA+TGG | + | tig0021787:81560-81579 | None:intergenic | 40.0% | |
| TAGCCTAATACATCATGCTG+TGG | - | tig0021787:81560-81579 | Msa1394450:intron | 40.0% | |
| CAATATCGTAGAATCAGGAC+AGG | + | tig0021787:81711-81730 | None:intergenic | 40.0% | |
| CTGTCCTGATTCTACGATAT+TGG | - | tig0021787:81709-81728 | Msa1394450:CDS | 40.0% | |
| !! | ATTTCTTTCCTTGGTCTTGC+AGG | - | tig0021787:81812-81831 | Msa1394450:intron | 40.0% |
| !! | AAAAGACTAGCTTCCATGCT+AGG | - | tig0021787:82280-82299 | Msa1394450:CDS | 40.0% |
| CTTCTTGTGCTGAGAGAAAT+TGG | + | tig0021787:82522-82541 | None:intergenic | 40.0% | |
| TCAGCACAAGAAGAAGAACT+TGG | - | tig0021787:82529-82548 | Msa1394450:intron | 40.0% | |
| ! | TTTAAGGTTGGGTACGGTAA+TGG | + | tig0021787:82709-82728 | None:intergenic | 40.0% |
| GTCTGAAAGCTACGTAGTAT+CGG | - | tig0021787:82936-82955 | Msa1394450:intron | 40.0% | |
| TGTCAACAGAACAGCAAACT+AGG | + | tig0021787:83201-83220 | None:intergenic | 40.0% | |
| !! | TGCATCAGATGTCCACTTTT+TGG | - | tig0021787:83348-83367 | Msa1394450:intron | 40.0% |
| ! | CTTCATCCAGAACTGATTCA+GGG | + | tig0021787:83381-83400 | None:intergenic | 40.0% |
| CTTTGATGTGAGGTCAGAAA+TGG | + | tig0021787:83497-83516 | None:intergenic | 40.0% | |
| ! | GTTAAAAATGCTGCCACTTC+GGG | - | tig0021787:83523-83542 | Msa1394450:intron | 40.0% |
| ! | TGGATCGATTCATGCTAACA+TGG | - | tig0021787:83581-83600 | Msa1394450:intron | 40.0% |
| GATTATGGCATGGATTTGAG+TGG | - | tig0021787:83649-83668 | Msa1394450:intron | 40.0% | |
| ATGATCAGGTTCTTGAAGTG+CGG | - | tig0021787:83713-83732 | Msa1394450:intron | 40.0% | |
| TGCCAGTGTATCAGCAAAAA+AGG | - | tig0021787:83873-83892 | Msa1394450:intron | 40.0% | |
| ! | CCATGTTGATTGATCAGAAC+AGG | + | tig0021787:83946-83965 | None:intergenic | 40.0% |
| CCTGTTCTGATCAATCAACA+TGG | - | tig0021787:83943-83962 | Msa1394450:intron | 40.0% | |
| ! | AGGATGAAGTTCTAGCTAGA+GGG | + | tig0021787:84327-84346 | None:intergenic | 40.0% |
| ! | AAGGATGAAGTTCTAGCTAG+AGG | + | tig0021787:84328-84347 | None:intergenic | 40.0% |
| TCTAGCTAGAACTTCATCCT+TGG | - | tig0021787:84327-84346 | Msa1394450:intron | 40.0% | |
| TGAGTTCAGCACTTGACATT+TGG | - | tig0021787:84573-84592 | Msa1394450:intron | 40.0% | |
| CTTGAAATGTGTTGGGTCAA+GGG | + | tig0021787:84827-84846 | None:intergenic | 40.0% | |
| ACTTGAAATGTGTTGGGTCA+AGG | + | tig0021787:84828-84847 | None:intergenic | 40.0% | |
| !! | CGGTTGACTTGAAATGTGTT+GGG | + | tig0021787:84834-84853 | None:intergenic | 40.0% |
| !! | TCGGTTGACTTGAAATGTGT+TGG | + | tig0021787:84835-84854 | None:intergenic | 40.0% |
| !! | ATTTTTCGACGTGCCCTTTT+CGG | + | tig0021787:84854-84873 | None:intergenic | 40.0% |
| CATGTTCTACTGGCAAGTTA+TGG | + | tig0021787:84908-84927 | None:intergenic | 40.0% | |
| ! | ATAGAGCCTTTTAGTCAAGC+TGG | - | tig0021787:84951-84970 | Msa1394450:CDS | 40.0% |
| GCAGTCAATGAGATTAGAAG+AGG | + | tig0021787:85114-85133 | None:intergenic | 40.0% | |
| GTTCCGACTGAAAGAGGTTA+TGG | - | tig0021787:78037-78056 | Msa1394450:three_prime_UTR | 45.0% | |
| GTGCCATAACCTCTTTCAGT+CGG | + | tig0021787:78043-78062 | None:intergenic | 45.0% | |
| !! | AGAGTGATGTTGGTGATGAC+AGG | + | tig0021787:78076-78095 | None:intergenic | 45.0% |
| GTGTTTGCAGAGAGTGATGT+TGG | + | tig0021787:78086-78105 | None:intergenic | 45.0% | |
| ! | CATGGTGATGAAACAGAGGA+AGG | + | tig0021787:78188-78207 | None:intergenic | 45.0% |
| ! | GCAACATGGTGATGAAACAG+AGG | + | tig0021787:78192-78211 | None:intergenic | 45.0% |
| GAACACACTGTGAAGCAACA+TGG | + | tig0021787:78206-78225 | None:intergenic | 45.0% | |
| TCTAGGAGAATGGATATGGC+TGG | - | tig0021787:78287-78306 | Msa1394450:three_prime_UTR | 45.0% | |
| AGATGTTCTCGTGTTTGGTC+CGG | - | tig0021787:78673-78692 | Msa1394450:intron | 45.0% | |
| GGAACCAAACATACCCTTCT+TGG | - | tig0021787:78962-78981 | Msa1394450:intron | 45.0% | |
| GTGTGAGGATGAACCAAGAA+GGG | + | tig0021787:78978-78997 | None:intergenic | 45.0% | |
| TGTGTGAGGATGAACCAAGA+AGG | + | tig0021787:78979-78998 | None:intergenic | 45.0% | |
| ! | GCTTCTTTTCCTGTCAGCTT+TGG | - | tig0021787:79917-79936 | Msa1394450:CDS | 45.0% |
| ! | ACACAAAGCGCTATACTGTC+GGG | + | tig0021787:79957-79976 | None:intergenic | 45.0% |
| ! | CACACAAAGCGCTATACTGT+CGG | + | tig0021787:79958-79977 | None:intergenic | 45.0% |
| ! | ACTGCTGGTGCTAATTCTGT+TGG | - | tig0021787:79996-80015 | Msa1394450:CDS | 45.0% |
| GACAGTAGTGGTTTCGTTGA+CGG | - | tig0021787:80023-80042 | Msa1394450:CDS | 45.0% | |
| AACGCGGTTACGAACAATGT+TGG | + | tig0021787:80102-80121 | None:intergenic | 45.0% | |
| TCGTAACCGCGTTTCTCAAA+TGG | - | tig0021787:80109-80128 | Msa1394450:CDS | 45.0% | |
| CGTAACCGCGTTTCTCAAAT+GGG | - | tig0021787:80110-80129 | Msa1394450:CDS | 45.0% | |
| ! | GATTCCTGCATGAAGTGTCT+AGG | + | tig0021787:80223-80242 | None:intergenic | 45.0% |
| CAACACTCCAATCTGGTGTT+TGG | + | tig0021787:80762-80781 | None:intergenic | 45.0% | |
| TCTCGAAATAGTGGTGTGCT+TGG | - | tig0021787:80979-80998 | Msa1394450:intron | 45.0% | |
| ATGCATAGGGAAAATCTGGG+AGG | + | tig0021787:81025-81044 | None:intergenic | 45.0% | |
| ATTTGCCGGAACTTGACAGT+AGG | + | tig0021787:81055-81074 | None:intergenic | 45.0% | |
| TGTCAAGTTCCGGCAAATCA+AGG | - | tig0021787:81057-81076 | Msa1394450:intron | 45.0% | |
| !! | AGAAGGATGCCTTGATTTGC+CGG | + | tig0021787:81069-81088 | None:intergenic | 45.0% |
| ! | ATCAAGGCATCCTTCTTGTG+CGG | - | tig0021787:81073-81092 | Msa1394450:intron | 45.0% |
| TCACACGGAATAGGATACGA+AGG | - | tig0021787:81292-81311 | Msa1394450:intron | 45.0% | |
| CACACGGAATAGGATACGAA+GGG | - | tig0021787:81293-81312 | Msa1394450:intron | 45.0% | |
| CATAAGTACCTGCAAGACCA+AGG | + | tig0021787:81823-81842 | None:intergenic | 45.0% | |
| ! | TGCAACACAGGAAAGTACGT+AGG | + | tig0021787:81997-82016 | None:intergenic | 45.0% |
| ACGTACTTTCCTGTGTTGCA+CGG | - | tig0021787:81997-82016 | Msa1394450:CDS | 45.0% | |
| AACAAAGCTACGGGTACGTT+AGG | - | tig0021787:82051-82070 | Msa1394450:intron | 45.0% | |
| TTCTCTGGATGAACCTAGCA+TGG | + | tig0021787:82296-82315 | None:intergenic | 45.0% | |
| !! | TGAGGTTGCTAGTCTTTCTC+TGG | + | tig0021787:82311-82330 | None:intergenic | 45.0% |
| GGGATATTGGTGGAGATGAA+TGG | + | tig0021787:82360-82379 | None:intergenic | 45.0% | |
| CACGGGTACGTTTAGCAAAA+TGG | - | tig0021787:82799-82818 | Msa1394450:intron | 45.0% | |
| !! | GGAAAGTACCACTGAAGCAT+GGG | + | tig0021787:82829-82848 | None:intergenic | 45.0% |
| ACGGACAGGCTTTCGATATA+AGG | + | tig0021787:82964-82983 | None:intergenic | 45.0% | |
| AGAACAGCAAACTAGGACTC+TGG | + | tig0021787:83194-83213 | None:intergenic | 45.0% | |
| GTATTGTGTTGCCGATGAGT+TGG | - | tig0021787:83276-83295 | Msa1394450:CDS | 45.0% | |
| CAGGGTTCACATCCAAAAAG+TGG | + | tig0021787:83363-83382 | None:intergenic | 45.0% | |
| TGTGAACCCTGAATCAGTTC+TGG | - | tig0021787:83372-83391 | Msa1394450:intron | 45.0% | |
| ! | GCTTCATCCAGAACTGATTC+AGG | + | tig0021787:83382-83401 | None:intergenic | 45.0% |
| GTCAGAAATGGCTCCAACTT+TGG | + | tig0021787:83485-83504 | None:intergenic | 45.0% | |
| ! | CTTTTGTTGCTCGTCTTGTG+TGG | - | tig0021787:83684-83703 | Msa1394450:intron | 45.0% |
| ! | TTGTGTGGTTGGTCATGATC+AGG | - | tig0021787:83699-83718 | Msa1394450:intron | 45.0% |
| !!! | GGCCTTTTTTGCTGATACAC+TGG | + | tig0021787:83878-83897 | None:intergenic | 45.0% |
| AATCAATCCCAGTTGCTGCA+AGG | - | tig0021787:83911-83930 | Msa1394450:intron | 45.0% | |
| ACACTGCCACTACAGAATGA+AGG | - | tig0021787:84123-84142 | Msa1394450:intron | 45.0% | |
| GACACTCCTTCATTCTGTAG+TGG | + | tig0021787:84132-84151 | None:intergenic | 45.0% | |
| ! | CAAGCATTGCTCTTGCTTGA+TGG | - | tig0021787:84643-84662 | Msa1394450:intron | 45.0% |
| AAGCCGAAAATTCCACTTGG+AGG | - | tig0021787:84680-84699 | Msa1394450:intron | 45.0% | |
| ! | CCTCCTCCAAGTGGAATTTT+CGG | + | tig0021787:84686-84705 | None:intergenic | 45.0% |
| TACTGGCAAGTTATGGCTTC+TGG | + | tig0021787:84901-84920 | None:intergenic | 45.0% | |
| TTTGAGCATCCACTTCCATC+TGG | + | tig0021787:85081-85100 | None:intergenic | 45.0% | |
| GGAAGTGGATGCTCAAATTG+TGG | - | tig0021787:85084-85103 | Msa1394450:CDS | 45.0% | |
| TACAGTGGAACAGGGTGAAG+TGG | - | tig0021787:78009-78028 | Msa1394450:three_prime_UTR | 50.0% | |
| CTGAAAGAGGTTATGGCACG+AGG | - | tig0021787:78044-78063 | Msa1394450:three_prime_UTR | 50.0% | |
| ! | GGAGCCAAAATTGACTCTCG+AGG | + | tig0021787:78933-78952 | None:intergenic | 50.0% |
| GCGCTTTGTGTGTTAACTGC+TGG | - | tig0021787:79966-79985 | Msa1394450:CDS | 50.0% | |
| ACTGCTGGATGGAAAACTGC+TGG | - | tig0021787:79981-80000 | Msa1394450:CDS | 50.0% | |
| !! | TCTGTTGGCACTGACAGTAG+TGG | - | tig0021787:80011-80030 | Msa1394450:CDS | 50.0% |
| TGGTTTCGTTGACGGTCTGT+TGG | - | tig0021787:80031-80050 | Msa1394450:CDS | 50.0% | |
| ACGTGCAGAGAGTAAAGACG+AGG | - | tig0021787:80076-80095 | Msa1394450:CDS | 50.0% | |
| AACCGCGTTTCTCAAATGGG+TGG | - | tig0021787:80113-80132 | Msa1394450:intron | 50.0% | |
| ACCGCGTTTCTCAAATGGGT+GGG | - | tig0021787:80114-80133 | Msa1394450:intron | 50.0% | |
| ACCCACCCATTTGAGAAACG+CGG | + | tig0021787:80118-80137 | None:intergenic | 50.0% | |
| CTGACCTAGACACTTCATGC+AGG | - | tig0021787:80216-80235 | Msa1394450:intron | 50.0% | |
| !!! | CCTTGTTTTGGCTTGCCACT+TGG | + | tig0021787:80273-80292 | None:intergenic | 50.0% |
| CCAAGTGGCAAGCCAAAACA+AGG | - | tig0021787:80270-80289 | Msa1394450:intron | 50.0% | |
| AAGAAGCTGCTCGTGACATG+AGG | - | tig0021787:80301-80320 | Msa1394450:intron | 50.0% | |
| GGCCCTTAGATGTTTGTGCT+GGG | - | tig0021787:80660-80679 | Msa1394450:intron | 50.0% | |
| GTCTGTGCCAAACACCAGAT+TGG | - | tig0021787:80752-80771 | Msa1394450:intron | 50.0% | |
| TGCACATCATGCTGATGACC+AGG | - | tig0021787:80787-80806 | Msa1394450:intron | 50.0% | |
| GGGAAAATCTGGGAGGTGAA+AGG | + | tig0021787:81018-81037 | None:intergenic | 50.0% | |
| TCTTCACAGATATGCCGAGG+AGG | - | tig0021787:81225-81244 | Msa1394450:intron | 50.0% | |
| TGGGTCTTCTACCCACTCTT+CGG | + | tig0021787:81253-81272 | None:intergenic | 50.0% | |
| CGTACTTTCCTGTGTTGCAC+GGG | - | tig0021787:81998-82017 | Msa1394450:CDS | 50.0% | |
| TGACGGAGCTGGTATTCTTG+AGG | + | tig0021787:82329-82348 | None:intergenic | 50.0% | |
| TGGAATCTATCTGACGGAGC+TGG | + | tig0021787:82340-82359 | None:intergenic | 50.0% | |
| !! | TAATGGTGCTGCAGTGGTAC+TGG | + | tig0021787:82692-82711 | None:intergenic | 50.0% |
| TTTGCTAAACGTACCCGTGC+CGG | + | tig0021787:82798-82817 | None:intergenic | 50.0% | |
| ! | ATGGAGTACCCATGCTTCAG+TGG | - | tig0021787:82818-82837 | Msa1394450:intron | 50.0% |
| !! | GGGAAAGTACCACTGAAGCA+TGG | + | tig0021787:82830-82849 | None:intergenic | 50.0% |
| CAGTGGTACTTTCCCATGCA+AGG | - | tig0021787:82835-82854 | Msa1394450:intron | 50.0% | |
| TAGAACTCGATTTCTGCCGC+TGG | - | tig0021787:83133-83152 | Msa1394450:intron | 50.0% | |
| CGGACAAAGGTAACAACCAG+CGG | + | tig0021787:83152-83171 | None:intergenic | 50.0% | |
| ! | CGCTGGTTGTTACCTTTGTC+CGG | - | tig0021787:83150-83169 | Msa1394450:CDS | 50.0% |
| TGTTACCTTTGTCCGGATCC+TGG | - | tig0021787:83157-83176 | Msa1394450:CDS | 50.0% | |
| TAGAACCAGGATCCGGACAA+AGG | + | tig0021787:83165-83184 | None:intergenic | 50.0% | |
| !! | TGTCCGGATCCTGGTTCTAA+AGG | - | tig0021787:83166-83185 | Msa1394450:CDS | 50.0% |
| !! | GTCCGGATCCTGGTTCTAAA+GGG | - | tig0021787:83167-83186 | Msa1394450:CDS | 50.0% |
| !! | GACCCTTTAGAACCAGGATC+CGG | + | tig0021787:83172-83191 | None:intergenic | 50.0% |
| !! | ACTCTGGACCCTTTAGAACC+AGG | + | tig0021787:83178-83197 | None:intergenic | 50.0% |
| AACTTTGGACCTGAAGCGGT+CGG | + | tig0021787:83470-83489 | None:intergenic | 50.0% | |
| CTCCAACTTTGGACCTGAAG+CGG | + | tig0021787:83474-83493 | None:intergenic | 50.0% | |
| ATGAAGTAACAGCACTGCCC+CGG | + | tig0021787:83562-83581 | None:intergenic | 50.0% | |
| TGTTGCTCGTCTTGTGTGGT+TGG | - | tig0021787:83688-83707 | Msa1394450:intron | 50.0% | |
| ACACTGGCATAGTGCAGACA+TGG | + | tig0021787:83862-83881 | None:intergenic | 50.0% | |
| AGCTTCTCCTTGCAGCAACT+GGG | + | tig0021787:83921-83940 | None:intergenic | 50.0% | |
| AAGCTTCTCCTTGCAGCAAC+TGG | + | tig0021787:83922-83941 | None:intergenic | 50.0% | |
| CCGAAAATTCCACTTGGAGG+AGG | - | tig0021787:84683-84702 | Msa1394450:intron | 50.0% | |
| GAAATGTGTTGGGTCAAGGG+TGG | + | tig0021787:84824-84843 | None:intergenic | 50.0% | |
| GTTATGGCTTCTGGTGACTG+TGG | + | tig0021787:84892-84911 | None:intergenic | 50.0% | |
| TCTTCATCCAGGACTCCAGA+TGG | - | tig0021787:85063-85082 | Msa1394450:CDS | 50.0% | |
| TGTTCTCGTGTTTGGTCCGG+TGG | - | tig0021787:78676-78695 | Msa1394450:intron | 55.0% | |
| CAGAGACTCCCAAAGCTGAC+AGG | + | tig0021787:79929-79948 | None:intergenic | 55.0% | |
| !! | CTGTCAGCTTTGGGAGTCTC+TGG | - | tig0021787:79927-79946 | Msa1394450:CDS | 55.0% |
| !! | TCAGCTTTGGGAGTCTCTGG+TGG | - | tig0021787:79930-79949 | Msa1394450:CDS | 55.0% |
| GGGCCCTTAGATGTTTGTGC+TGG | - | tig0021787:80659-80678 | Msa1394450:intron | 55.0% | |
| AGTGGTGTGCTTGGACTTGC+AGG | - | tig0021787:80988-81007 | Msa1394450:intron | 55.0% | |
| TTTCCTGTGTTGCACGGGTG+CGG | - | tig0021787:82003-82022 | Msa1394450:CDS | 55.0% | |
| ! | GTGCTGCAGTGGTACTGGAA+GGG | + | tig0021787:82687-82706 | None:intergenic | 55.0% |
| !! | GTACGGTAATGGTGCTGCAG+TGG | + | tig0021787:82698-82717 | None:intergenic | 55.0% |
| TTGCTAAACGTACCCGTGCC+GGG | + | tig0021787:82797-82816 | None:intergenic | 55.0% | |
| AGCAAGAAACCGACCGCTTC+AGG | - | tig0021787:83458-83477 | Msa1394450:intron | 55.0% | |
| GACCGCTTCAGGTCCAAAGT+TGG | - | tig0021787:83469-83488 | Msa1394450:intron | 55.0% | |
| CTGAAGCGAATTGCCCGAAG+TGG | + | tig0021787:83539-83558 | None:intergenic | 55.0% | |
| TTCGGGCAATTCGCTTCAGC+CGG | - | tig0021787:83540-83559 | Msa1394450:intron | 55.0% | |
| ! | GGGGCAGTGCTGTTACTTCA+TGG | - | tig0021787:83561-83580 | Msa1394450:intron | 55.0% |
| !! | CTCTTGCTTGATGGTGCACG+TGG | - | tig0021787:84652-84671 | Msa1394450:intron | 55.0% |
| GAGCTATGACCTCCTCCAAG+TGG | + | tig0021787:84695-84714 | None:intergenic | 55.0% | |
| TCCAGGACTCCAGATGGAAG+TGG | - | tig0021787:85069-85088 | Msa1394450:CDS | 55.0% | |
| ! | TCCACTTCCATCTGGAGTCC+TGG | + | tig0021787:85073-85092 | None:intergenic | 55.0% |
| CCAGAAGAGGCCGCACAAGA+AGG | + | tig0021787:81086-81105 | None:intergenic | 60.0% | |
| CCTTCTTGTGCGGCCTCTTC+TGG | - | tig0021787:81083-81102 | Msa1394450:intron | 60.0% | |
| CCCACTCTTCGGTACCTCCT+CGG | + | tig0021787:81242-81261 | None:intergenic | 60.0% | |
| !! | CCGAGGAGGTACCGAAGAGT+GGG | - | tig0021787:81239-81258 | Msa1394450:intron | 60.0% |
| TTCCTGTGTTGCACGGGTGC+GGG | - | tig0021787:82004-82023 | Msa1394450:CDS | 60.0% | |
| ! | GGTGCTGCAGTGGTACTGGA+AGG | + | tig0021787:82688-82707 | None:intergenic | 60.0% |
| TCGGGCAATTCGCTTCAGCC+GGG | - | tig0021787:83541-83560 | Msa1394450:intron | 60.0% | |
| GGCTTCTGGTGACTGTGGCT+AGG | + | tig0021787:84887-84906 | None:intergenic | 60.0% | |
| !! | GCCGAGGAGGTACCGAAGAG+TGG | - | tig0021787:81238-81257 | Msa1394450:intron | 65.0% |
| TACCCGCACCCGTGCAACAC+AGG | + | tig0021787:82009-82028 | None:intergenic | 65.0% | |
| GTGTTGCACGGGTGCGGGTA+CGG | - | tig0021787:82009-82028 | Msa1394450:CDS | 65.0% | |
| TGTTGCACGGGTGCGGGTAC+GGG | - | tig0021787:82010-82029 | Msa1394450:CDS | 65.0% | |
| ACGGGTGCGGGTACGGGATA+CGG | - | tig0021787:82016-82035 | Msa1394450:intron | 65.0% | |
| ACCAGTACCCGCGCAGTACC+CGG | - | tig0021787:82776-82795 | Msa1394450:intron | 65.0% | |
| CGGGCAATTCGCTTCAGCCG+GGG | - | tig0021787:83542-83561 | Msa1394450:intron | 65.0% | |
| TACCCGCGCAGTACCCGGCA+CGG | - | tig0021787:82781-82800 | Msa1394450:intron | 70.0% | |
| ! | TACCCGTGCCGGGTACTGCG+CGG | + | tig0021787:82787-82806 | None:intergenic | 70.0% |
| ! | GCCGGGTACTGCGCGGGTAC+TGG | + | tig0021787:82780-82799 | None:intergenic | 75.0% |
| ACCCGCGCAGTACCCGGCAC+GGG | - | tig0021787:82782-82801 | Msa1394450:intron | 75.0% | |
| ! | ACCCGTGCCGGGTACTGCGC+GGG | + | tig0021787:82786-82805 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021787 | gene | 77993 | 85274 | 77993 | ID=Msa1394450;Name=Msa1394450 |
| tig0021787 | mRNA | 77993 | 85274 | 77993 | ID=Msa1394450-mRNA-1;Parent=Msa1394450;Name=Msa1394450-mRNA-1;_AED=0.13;_eAED=0.14;_QI=0|0.66|0.8|1|0.77|0.9|10|550|685 |
| tig0021787 | exon | 77993 | 78635 | 77993 | ID=Msa1394450-mRNA-1:exon:14356;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 79283 | 80131 | 79283 | ID=Msa1394450-mRNA-1:exon:14355;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 81434 | 81523 | 81434 | ID=Msa1394450-mRNA-1:exon:14354;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 81674 | 81783 | 81674 | ID=Msa1394450-mRNA-1:exon:14353;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 81931 | 82033 | 81931 | ID=Msa1394450-mRNA-1:exon:14352;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 82136 | 82312 | 82136 | ID=Msa1394450-mRNA-1:exon:14351;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 82459 | 82534 | 82459 | ID=Msa1394450-mRNA-1:exon:14350;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 83021 | 83042 | 83021 | ID=Msa1394450-mRNA-1:exon:14349;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 83136 | 83333 | 83136 | ID=Msa1394450-mRNA-1:exon:14348;Parent=Msa1394450-mRNA-1 |
| tig0021787 | exon | 84935 | 85274 | 84935 | ID=Msa1394450-mRNA-1:exon:14347;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 84935 | 85274 | 84935 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 83136 | 83333 | 83136 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 83021 | 83042 | 83021 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 82459 | 82534 | 82459 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 82136 | 82312 | 82136 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 81931 | 82033 | 81931 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 81674 | 81783 | 81674 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 81434 | 81523 | 81434 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 79283 | 80131 | 79283 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | CDS | 78543 | 78635 | 78543 | ID=Msa1394450-mRNA-1:cds;Parent=Msa1394450-mRNA-1 |
| tig0021787 | three_prime_UTR | 77993 | 78542 | 77993 | ID=Msa1394450-mRNA-1:three_prime_utr;Parent=Msa1394450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
