Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054640 | KEH40087.1 | 73.333 | 120 | 22 | 1 | 1 | 120 | 94 | 203 | 1.07e-54 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054640 | A0A072VE42 | 73.333 | 120 | 22 | 1 | 1 | 120 | 94 | 203 | 5.13e-55 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0054640 | 0.813030 | 3.145353e-51 | -8.615850e-47 |
| Msa0020630 | Msa0054640 | 0.817955 | 2.520385e-52 | -8.615850e-47 |
| Msa0027540 | Msa0054640 | 0.826048 | 3.359384e-54 | -8.615850e-47 |
| Msa0030730 | Msa0054640 | 0.812618 | 3.872131e-51 | -8.615850e-47 |
| Msa0032120 | Msa0054640 | 0.816400 | 5.638406e-52 | -8.615850e-47 |
| Msa0032400 | Msa0054640 | 0.804542 | 2.055173e-49 | -8.615850e-47 |
| Msa0037820 | Msa0054640 | 0.806800 | 6.899514e-50 | -8.615850e-47 |
| Msa0038350 | Msa0054640 | -0.817359 | 3.435839e-52 | -8.615850e-47 |
| Msa0048020 | Msa0054640 | 0.804328 | 2.277663e-49 | -8.615850e-47 |
| Msa0050430 | Msa0054640 | 0.801520 | 8.663304e-49 | -8.615850e-47 |
| Msa0050940 | Msa0054640 | 0.987274 | 1.134867e-169 | -8.615850e-47 |
| Msa0052080 | Msa0054640 | 0.800447 | 1.434975e-48 | -8.615850e-47 |
| Msa0054640 | Msa0055280 | 0.821191 | 4.603012e-53 | -8.615850e-47 |
| Msa0054640 | Msa0073820 | 0.802221 | 6.219325e-49 | -8.615850e-47 |
| Msa0054640 | Msa0075310 | 0.829246 | 5.729900e-55 | -8.615850e-47 |
| Msa0054640 | Msa0091770 | 0.812111 | 4.998036e-51 | -8.615850e-47 |
| Msa0054640 | Msa0094100 | 0.815251 | 1.017216e-51 | -8.615850e-47 |
| Msa0054640 | Msa0101060 | 0.819135 | 1.361215e-52 | -8.615850e-47 |
| Msa0054640 | Msa0101350 | 0.847898 | 8.638992e-60 | -8.615850e-47 |
| Msa0054640 | Msa0105340 | 0.811156 | 8.060063e-51 | -8.615850e-47 |
| Msa0054640 | Msa0105420 | 0.848037 | 7.908988e-60 | -8.615850e-47 |
| Msa0054640 | Msa0120330 | 0.844421 | 7.637778e-59 | -8.615850e-47 |
| Msa0054640 | Msa0137120 | -0.801607 | 8.312833e-49 | -8.615850e-47 |
| Msa0054640 | Msa0140910 | 0.808335 | 3.257886e-50 | -8.615850e-47 |
| Msa0054640 | Msa0141430 | 0.801168 | 1.022769e-48 | -8.615850e-47 |
| Msa0054640 | Msa0145670 | 0.983793 | 1.007375e-158 | -8.615850e-47 |
| Msa0054640 | Msa0149500 | 0.836071 | 1.159644e-56 | -8.615850e-47 |
| Msa0054640 | Msa0159750 | 0.813885 | 2.040459e-51 | -8.615850e-47 |
| Msa0054640 | Msa0162030 | 0.813685 | 2.258475e-51 | -8.615850e-47 |
| Msa0054640 | Msa0162050 | 0.824030 | 1.006592e-53 | -8.615850e-47 |
| Msa0054640 | Msa0162070 | 0.808663 | 2.773069e-50 | -8.615850e-47 |
| Msa0054640 | Msa0164360 | 0.813968 | 1.956854e-51 | -8.615850e-47 |
| Msa0054640 | Msa0168100 | 0.833885 | 4.124124e-56 | -8.615850e-47 |
| Msa0054640 | Msa0171780 | 0.803217 | 3.873773e-49 | -8.615850e-47 |
| Msa0054640 | Msa0172350 | 0.814824 | 1.265361e-51 | -8.615850e-47 |
| Msa0054640 | Msa0182930 | 0.800416 | 1.455874e-48 | -8.615850e-47 |
| Msa0054640 | Msa0183610 | 0.829095 | 6.236690e-55 | -8.615850e-47 |
| Msa0054640 | Msa0183620 | 0.823028 | 1.726978e-53 | -8.615850e-47 |
| Msa0054640 | Msa0185480 | 0.838586 | 2.633865e-57 | -8.615850e-47 |
| Msa0054640 | Msa0185700 | 0.807134 | 5.863551e-50 | -8.615850e-47 |
| Msa0054640 | Msa0196130 | -0.834471 | 2.940213e-56 | -8.615850e-47 |
| Msa0054640 | Msa0203640 | 0.803872 | 2.833165e-49 | -8.615850e-47 |
| Msa0054640 | Msa0207000 | 0.835464 | 1.652499e-56 | -8.615850e-47 |
| Msa0054640 | Msa0208390 | 0.814357 | 1.605514e-51 | -8.615850e-47 |
| Msa0054640 | Msa0208630 | 0.806495 | 8.001101e-50 | -8.615850e-47 |
| Msa0054640 | Msa0217400 | 0.816429 | 5.555112e-52 | -8.615850e-47 |
| Msa0054640 | Msa0227500 | 0.815820 | 7.598412e-52 | -8.615850e-47 |
| Msa0054640 | Msa0239660 | 0.803181 | 3.941312e-49 | -8.615850e-47 |
| Msa0054640 | Msa0252180 | 0.814678 | 1.363597e-51 | -8.615850e-47 |
| Msa0054640 | Msa0253370 | 0.802779 | 4.771375e-49 | -8.615850e-47 |
| Msa0054640 | Msa0257250 | 0.813200 | 2.887618e-51 | -8.615850e-47 |
| Msa0054640 | Msa0258670 | -0.800346 | 1.504850e-48 | -8.615850e-47 |
| Msa0054640 | Msa0265820 | 0.823924 | 1.065974e-53 | -8.615850e-47 |
| Msa0054640 | Msa0267760 | 0.823370 | 1.437031e-53 | -8.615850e-47 |
| Msa0054640 | Msa0269360 | 0.822597 | 2.174987e-53 | -8.615850e-47 |
| Msa0054640 | Msa0270270 | 0.803709 | 3.062412e-49 | -8.615850e-47 |
| Msa0054640 | Msa0272480 | -0.803374 | 3.593639e-49 | -8.615850e-47 |
| Msa0054640 | Msa0275670 | 0.821922 | 3.119605e-53 | -8.615850e-47 |
| Msa0054640 | Msa0282170 | 0.801366 | 9.317094e-49 | -8.615850e-47 |
| Msa0054640 | Msa0284780 | 0.803134 | 4.029411e-49 | -8.615850e-47 |
| Msa0054640 | Msa0288240 | 0.804054 | 2.597131e-49 | -8.615850e-47 |
| Msa0054640 | Msa0288330 | 0.820596 | 6.310760e-53 | -8.615850e-47 |
| Msa0054640 | Msa0296560 | 0.813260 | 2.801104e-51 | -8.615850e-47 |
| Msa0054640 | Msa0296760 | 0.833971 | 3.925124e-56 | -8.615850e-47 |
| Msa0054640 | Msa0298940 | 0.826298 | 2.929044e-54 | -8.615850e-47 |
| Msa0054640 | Msa0298970 | 0.832338 | 1.000599e-55 | -8.615850e-47 |
| Msa0054640 | Msa0301180 | 0.814049 | 1.877563e-51 | -8.615850e-47 |
| Msa0054640 | Msa0304740 | 0.814299 | 1.653195e-51 | -8.615850e-47 |
| Msa0054640 | Msa0311860 | 0.810890 | 9.203355e-51 | -8.615850e-47 |
| Msa0054640 | Msa0312690 | -0.805364 | 1.383275e-49 | -8.615850e-47 |
| Msa0054640 | Msa0316160 | -0.816295 | 5.952288e-52 | -8.615850e-47 |
| Msa0054640 | Msa0320540 | 0.812049 | 5.153841e-51 | -8.615850e-47 |
| Msa0054640 | Msa0325470 | 0.812199 | 4.781130e-51 | -8.615850e-47 |
| Msa0054640 | Msa0326670 | 0.826530 | 2.579736e-54 | -8.615850e-47 |
| Msa0054640 | Msa0331590 | 0.817426 | 3.317333e-52 | -8.615850e-47 |
| Msa0054640 | Msa0335040 | 0.812600 | 3.908309e-51 | -8.615850e-47 |
| Msa0054640 | Msa0342200 | 0.828335 | 9.519166e-55 | -8.615850e-47 |
| Msa0054640 | Msa0342340 | -0.809158 | 2.173003e-50 | -8.615850e-47 |
| Msa0054640 | Msa0351500 | 0.801153 | 1.029953e-48 | -8.615850e-47 |
| Msa0054640 | Msa0371610 | 0.801969 | 7.005815e-49 | -8.615850e-47 |
| Msa0054640 | Msa0374070 | 0.815221 | 1.032834e-51 | -8.615850e-47 |
| Msa0054640 | Msa0376510 | 0.804689 | 1.914396e-49 | -8.615850e-47 |
| Msa0054640 | Msa0378340 | 0.804054 | 2.596348e-49 | -8.615850e-47 |
| Msa0054640 | Msa0413740 | 0.800986 | 1.114037e-48 | -8.615850e-47 |
| Msa0054640 | Msa0414950 | -0.819506 | 1.120551e-52 | -8.615850e-47 |
| Msa0054640 | Msa0423250 | 0.818038 | 2.414899e-52 | -8.615850e-47 |
| Msa0054640 | Msa0423360 | -0.808905 | 2.461857e-50 | -8.615850e-47 |
| Msa0054640 | Msa0427690 | 0.804941 | 1.696220e-49 | -8.615850e-47 |
| Msa0054640 | Msa0431430 | 0.811291 | 7.533669e-51 | -8.615850e-47 |
| Msa0054640 | Msa0437710 | 0.834777 | 2.463563e-56 | -8.615850e-47 |
| Msa0054640 | Msa0442880 | 0.818429 | 1.969523e-52 | -8.615850e-47 |
| Msa0054640 | Msa0467920 | -0.810406 | 1.171207e-50 | -8.615850e-47 |
| Msa0054640 | Msa0469390 | 0.807293 | 5.425137e-50 | -8.615850e-47 |
| Msa0054640 | Msa0480320 | 0.819338 | 1.223876e-52 | -8.615850e-47 |
| Msa0054640 | Msa0490300 | 0.831276 | 1.829672e-55 | -8.615850e-47 |
| Msa0054640 | Msa0490350 | 0.825631 | 4.220163e-54 | -8.615850e-47 |
| Msa0054640 | Msa0508200 | 0.820465 | 6.760466e-53 | -8.615850e-47 |
| Msa0054640 | Msa0508610 | 0.801705 | 7.938403e-49 | -8.615850e-47 |
| Msa0054640 | Msa0508650 | 0.803291 | 3.739367e-49 | -8.615850e-47 |
| Msa0054640 | Msa0509970 | 0.837682 | 4.499611e-57 | -8.615850e-47 |
| Msa0054640 | Msa0516450 | 0.810359 | 1.198789e-50 | -8.615850e-47 |
| Msa0054640 | Msa0517340 | 0.802288 | 6.023496e-49 | -8.615850e-47 |
| Msa0054640 | Msa0518520 | 0.803107 | 4.082597e-49 | -8.615850e-47 |
| Msa0054640 | Msa0521880 | 0.811289 | 7.543961e-51 | -8.615850e-47 |
| Msa0054640 | Msa0524050 | 0.807634 | 4.592005e-50 | -8.615850e-47 |
| Msa0054640 | Msa0524120 | 0.816759 | 4.686838e-52 | -8.615850e-47 |
| Msa0054640 | Msa0524890 | -0.805020 | 1.633138e-49 | -8.615850e-47 |
| Msa0054640 | Msa0526640 | -0.800363 | 1.492461e-48 | -8.615850e-47 |
| Msa0054640 | Msa0526700 | 0.812907 | 3.347025e-51 | -8.615850e-47 |
| Msa0054640 | Msa0526710 | 0.817591 | 3.045698e-52 | -8.615850e-47 |
| Msa0054640 | Msa0535030 | 0.818553 | 1.846166e-52 | -8.615850e-47 |
| Msa0054640 | Msa0535060 | 0.823097 | 1.663428e-53 | -8.615850e-47 |
| Msa0054640 | Msa0538700 | 0.835380 | 1.735677e-56 | -8.615850e-47 |
| Msa0054640 | Msa0540070 | 0.804605 | 1.993337e-49 | -8.615850e-47 |
| Msa0054640 | Msa0540320 | 0.801174 | 1.019740e-48 | -8.615850e-47 |
| Msa0054640 | Msa0546380 | 0.820269 | 7.499129e-53 | -8.615850e-47 |
| Msa0054640 | Msa0557680 | 0.809661 | 1.694632e-50 | -8.615850e-47 |
| Msa0054640 | Msa0574170 | 0.826502 | 2.619791e-54 | -8.615850e-47 |
| Msa0054640 | Msa0575250 | 0.809935 | 1.479499e-50 | -8.615850e-47 |
| Msa0054640 | Msa0576420 | 0.820402 | 6.991474e-53 | -8.615850e-47 |
| Msa0054640 | Msa0581760 | 0.802351 | 5.847211e-49 | -8.615850e-47 |
| Msa0054640 | Msa0582110 | 0.824756 | 6.794336e-54 | -8.615850e-47 |
| Msa0054640 | Msa0583940 | 0.802770 | 4.791149e-49 | -8.615850e-47 |
| Msa0054640 | Msa0596100 | 0.805864 | 1.086359e-49 | -8.615850e-47 |
| Msa0054640 | Msa0604360 | 0.800273 | 1.556766e-48 | -8.615850e-47 |
| Msa0054640 | Msa0605620 | 0.813144 | 2.970460e-51 | -8.615850e-47 |
| Msa0054640 | Msa0619330 | 0.813065 | 3.090066e-51 | -8.615850e-47 |
| Msa0054640 | Msa0620640 | 0.829807 | 4.186016e-55 | -8.615850e-47 |
| Msa0054640 | Msa0621890 | 0.844854 | 5.839412e-59 | -8.615850e-47 |
| Msa0054640 | Msa0624730 | 0.816680 | 4.881243e-52 | -8.615850e-47 |
| Msa0054640 | Msa0638280 | 0.810963 | 8.873965e-51 | -8.615850e-47 |
| Msa0054640 | Msa0638320 | 0.815345 | 9.696788e-52 | -8.615850e-47 |
| Msa0054640 | Msa0647000 | 0.803759 | 2.990566e-49 | -8.615850e-47 |
| Msa0054640 | Msa0657670 | 0.826952 | 2.045697e-54 | -8.615850e-47 |
| Msa0054640 | Msa0659380 | 0.800637 | 1.312645e-48 | -8.615850e-47 |
| Msa0054640 | Msa0668090 | 0.820369 | 7.115143e-53 | -8.615850e-47 |
| Msa0054640 | Msa0674220 | 0.818213 | 2.204471e-52 | -8.615850e-47 |
| Msa0054640 | Msa0677270 | 0.811524 | 6.707046e-51 | -8.615850e-47 |
| Msa0054640 | Msa0677820 | 0.807842 | 4.147652e-50 | -8.615850e-47 |
| Msa0054640 | Msa0681890 | 0.807849 | 4.133983e-50 | -8.615850e-47 |
| Msa0054640 | Msa0697140 | 0.821901 | 3.154815e-53 | -8.615850e-47 |
| Msa0054640 | Msa0707780 | 0.812871 | 3.407940e-51 | -8.615850e-47 |
| Msa0054640 | Msa0710060 | 0.810357 | 1.200242e-50 | -8.615850e-47 |
| Msa0054640 | Msa0715310 | 0.812217 | 4.736813e-51 | -8.615850e-47 |
| Msa0054640 | Msa0716450 | 0.802818 | 4.682772e-49 | -8.615850e-47 |
| Msa0054640 | Msa0722930 | 0.801124 | 1.044224e-48 | -8.615850e-47 |
| Msa0054640 | Msa0723140 | 0.802130 | 6.492326e-49 | -8.615850e-47 |
| Msa0054640 | Msa0725480 | -0.821290 | 4.367355e-53 | -8.615850e-47 |
| Msa0054640 | Msa0726610 | 0.803962 | 2.713507e-49 | -8.615850e-47 |
| Msa0054640 | Msa0733000 | 0.811055 | 8.478108e-51 | -8.615850e-47 |
| Msa0054640 | Msa0740420 | 0.814047 | 1.879314e-51 | -8.615850e-47 |
| Msa0054640 | Msa0754720 | -0.830185 | 3.386691e-55 | -8.615850e-47 |
| Msa0054640 | Msa0756630 | -0.819456 | 1.150592e-52 | -8.615850e-47 |
| Msa0054640 | Msa0760380 | 0.800952 | 1.131849e-48 | -8.615850e-47 |
| Msa0054640 | Msa0766100 | -0.814629 | 1.397848e-51 | -8.615850e-47 |
| Msa0054640 | Msa0770430 | 0.818433 | 1.964762e-52 | -8.615850e-47 |
| Msa0054640 | Msa0792510 | 0.853389 | 2.468227e-61 | -8.615850e-47 |
| Msa0054640 | Msa0811510 | 0.811405 | 7.118068e-51 | -8.615850e-47 |
| Msa0054640 | Msa0820670 | 0.817471 | 3.242233e-52 | -8.615850e-47 |
| Msa0054640 | Msa0829620 | 0.806066 | 9.850901e-50 | -8.615850e-47 |
| Msa0054640 | Msa0837990 | 0.833510 | 5.117295e-56 | -8.615850e-47 |
| Msa0054640 | Msa0842230 | 0.802275 | 6.061526e-49 | -8.615850e-47 |
| Msa0054640 | Msa0847200 | 0.809567 | 1.775413e-50 | -8.615850e-47 |
| Msa0054640 | Msa0851740 | 0.803243 | 3.825795e-49 | -8.615850e-47 |
| Msa0054640 | Msa0867890 | 0.808260 | 3.379439e-50 | -8.615850e-47 |
| Msa0054640 | Msa0890250 | 0.817029 | 4.076120e-52 | -8.615850e-47 |
| Msa0054640 | Msa0896210 | 0.801777 | 7.671205e-49 | -8.615850e-47 |
| Msa0054640 | Msa0907700 | 0.815317 | 9.836908e-52 | -8.615850e-47 |
| Msa0054640 | Msa0909710 | 0.834900 | 2.293949e-56 | -8.615850e-47 |
| Msa0054640 | Msa0922540 | 0.806823 | 6.822902e-50 | -8.615850e-47 |
| Msa0054640 | Msa0925160 | 0.818480 | 1.917321e-52 | -8.615850e-47 |
| Msa0054640 | Msa0937940 | 0.818247 | 2.165648e-52 | -8.615850e-47 |
| Msa0054640 | Msa0944770 | 0.826723 | 2.319119e-54 | -8.615850e-47 |
| Msa0054640 | Msa0946120 | 0.813651 | 2.297875e-51 | -8.615850e-47 |
| Msa0054640 | Msa0951710 | 0.807305 | 5.393897e-50 | -8.615850e-47 |
| Msa0054640 | Msa0951720 | 0.808561 | 2.914773e-50 | -8.615850e-47 |
| Msa0054640 | Msa0969570 | 0.811341 | 7.348682e-51 | -8.615850e-47 |
| Msa0054640 | Msa0969700 | 0.814205 | 1.734480e-51 | -8.615850e-47 |
| Msa0054640 | Msa0970050 | 0.802372 | 5.789307e-49 | -8.615850e-47 |
| Msa0054640 | Msa0975080 | 0.802815 | 4.690967e-49 | -8.615850e-47 |
| Msa0054640 | Msa0977320 | 0.811780 | 5.900702e-51 | -8.615850e-47 |
| Msa0054640 | Msa0980440 | 0.823814 | 1.131264e-53 | -8.615850e-47 |
| Msa0054640 | Msa1008490 | 0.844609 | 6.798620e-59 | -8.615850e-47 |
| Msa0054640 | Msa1009000 | 0.825074 | 5.716596e-54 | -8.615850e-47 |
| Msa0054640 | Msa1014270 | 0.810891 | 9.198496e-51 | -8.615850e-47 |
| Msa0054640 | Msa1036390 | 0.863917 | 1.767419e-64 | -8.615850e-47 |
| Msa0054640 | Msa1037000 | 0.806023 | 1.006149e-49 | -8.615850e-47 |
| Msa0054640 | Msa1038050 | 0.818295 | 2.111981e-52 | -8.615850e-47 |
| Msa0054640 | Msa1040120 | 0.846563 | 2.007404e-59 | -8.615850e-47 |
| Msa0054640 | Msa1044340 | 0.803202 | 3.901305e-49 | -8.615850e-47 |
| Msa0054640 | Msa1046610 | 0.806611 | 7.561931e-50 | -8.615850e-47 |
| Msa0054640 | Msa1055260 | 0.816460 | 5.468880e-52 | -8.615850e-47 |
| Msa0054640 | Msa1055280 | 0.825311 | 5.024374e-54 | -8.615850e-47 |
| Msa0054640 | Msa1072350 | 0.810623 | 1.051163e-50 | -8.615850e-47 |
| Msa0054640 | Msa1073840 | 0.815274 | 1.005607e-51 | -8.615850e-47 |
| Msa0054640 | Msa1076680 | 0.866338 | 3.067360e-65 | -8.615850e-47 |
| Msa0054640 | Msa1083410 | 0.817792 | 2.743934e-52 | -8.615850e-47 |
| Msa0054640 | Msa1097380 | 0.809405 | 1.923715e-50 | -8.615850e-47 |
| Msa0054640 | Msa1098560 | 0.820754 | 5.804143e-53 | -8.615850e-47 |
| Msa0054640 | Msa1099030 | 0.810973 | 8.832564e-51 | -8.615850e-47 |
| Msa0054640 | Msa1106560 | 0.804808 | 1.808668e-49 | -8.615850e-47 |
| Msa0054640 | Msa1115330 | 0.800651 | 1.303927e-48 | -8.615850e-47 |
| Msa0054640 | Msa1118140 | 0.800275 | 1.555834e-48 | -8.615850e-47 |
| Msa0054640 | Msa1128160 | 0.829241 | 5.746051e-55 | -8.615850e-47 |
| Msa0054640 | Msa1129560 | 0.801270 | 9.745109e-49 | -8.615850e-47 |
| Msa0054640 | Msa1130360 | 0.802527 | 5.379030e-49 | -8.615850e-47 |
| Msa0054640 | Msa1154160 | 0.800171 | 1.633021e-48 | -8.615850e-47 |
| Msa0054640 | Msa1159100 | 0.814989 | 1.163156e-51 | -8.615850e-47 |
| Msa0054640 | Msa1159360 | 0.810669 | 1.027473e-50 | -8.615850e-47 |
| Msa0054640 | Msa1165360 | 0.827155 | 1.828862e-54 | -8.615850e-47 |
| Msa0054640 | Msa1171690 | 0.807955 | 3.925736e-50 | -8.615850e-47 |
| Msa0054640 | Msa1201990 | 0.811454 | 6.946644e-51 | -8.615850e-47 |
| Msa0054640 | Msa1204980 | -0.805552 | 1.263457e-49 | -8.615850e-47 |
| Msa0054640 | Msa1205010 | -0.812476 | 4.159612e-51 | -8.615850e-47 |
| Msa0054640 | Msa1206020 | 0.821229 | 4.512334e-53 | -8.615850e-47 |
| Msa0054640 | Msa1217860 | 0.818158 | 2.268298e-52 | -8.615850e-47 |
| Msa0054640 | Msa1220230 | 0.838944 | 2.127666e-57 | -8.615850e-47 |
| Msa0054640 | Msa1221200 | -0.823873 | 1.095720e-53 | -8.615850e-47 |
| Msa0054640 | Msa1222970 | 0.830073 | 3.606479e-55 | -8.615850e-47 |
| Msa0054640 | Msa1223460 | 0.817187 | 3.755674e-52 | -8.615850e-47 |
| Msa0054640 | Msa1228210 | 0.843103 | 1.721461e-58 | -8.615850e-47 |
| Msa0054640 | Msa1229660 | 0.803043 | 4.207375e-49 | -8.615850e-47 |
| Msa0054640 | Msa1242330 | 0.816968 | 4.205980e-52 | -8.615850e-47 |
| Msa0054640 | Msa1246740 | 0.801978 | 6.977195e-49 | -8.615850e-47 |
| Msa0054640 | Msa1254770 | 0.823141 | 1.625283e-53 | -8.615850e-47 |
| Msa0054640 | Msa1254800 | 0.817499 | 3.195543e-52 | -8.615850e-47 |
| Msa0054640 | Msa1256540 | -0.804134 | 2.498767e-49 | -8.615850e-47 |
| Msa0054640 | Msa1261470 | 0.802250 | 6.134530e-49 | -8.615850e-47 |
| Msa0054640 | Msa1264020 | 0.814068 | 1.859579e-51 | -8.615850e-47 |
| Msa0054640 | Msa1265960 | 0.850009 | 2.239617e-60 | -8.615850e-47 |
| Msa0054640 | Msa1271280 | 0.821893 | 3.168722e-53 | -8.615850e-47 |
| Msa0054640 | Msa1271300 | 0.816265 | 6.044763e-52 | -8.615850e-47 |
| Msa0054640 | Msa1280120 | 0.805488 | 1.302849e-49 | -8.615850e-47 |
| Msa0054640 | Msa1280130 | 0.803913 | 2.777517e-49 | -8.615850e-47 |
| Msa0054640 | Msa1288170 | 0.802085 | 6.632439e-49 | -8.615850e-47 |
| Msa0054640 | Msa1296960 | -0.800457 | 1.428630e-48 | -8.615850e-47 |
| Msa0054640 | Msa1297090 | 0.804454 | 2.143146e-49 | -8.615850e-47 |
| Msa0054640 | Msa1302150 | 0.814514 | 1.481780e-51 | -8.615850e-47 |
| Msa0054640 | Msa1304180 | 0.802799 | 4.726328e-49 | -8.615850e-47 |
| Msa0054640 | Msa1309240 | 0.802636 | 5.106464e-49 | -8.615850e-47 |
| Msa0054640 | Msa1326000 | 0.815641 | 8.332260e-52 | -8.615850e-47 |
| Msa0054640 | Msa1328850 | 0.816226 | 6.166832e-52 | -8.615850e-47 |
| Msa0054640 | Msa1329990 | 0.821653 | 3.600644e-53 | -8.615850e-47 |
| Msa0054640 | Msa1342430 | 0.836510 | 8.972608e-57 | -8.615850e-47 |
| Msa0054640 | Msa1343820 | 0.821996 | 2.999377e-53 | -8.615850e-47 |
| Msa0054640 | Msa1350840 | 0.805822 | 1.108746e-49 | -8.615850e-47 |
| Msa0054640 | Msa1358870 | -0.825846 | 3.750831e-54 | -8.615850e-47 |
| Msa0054640 | Msa1365040 | -0.806069 | 9.838595e-50 | -8.615850e-47 |
| Msa0054640 | Msa1367080 | 0.813407 | 2.599739e-51 | -8.615850e-47 |
| Msa0054640 | Msa1373950 | 0.845485 | 3.944542e-59 | -8.615850e-47 |
| Msa0054640 | Msa1384120 | -0.801133 | 1.039589e-48 | -8.615850e-47 |
| Msa0054640 | Msa1385620 | 0.810839 | 9.442091e-51 | -8.615850e-47 |
| Msa0054640 | Msa1385900 | 0.814185 | 1.752143e-51 | -8.615850e-47 |
| Msa0054640 | Msa1390310 | 0.819841 | 9.398883e-53 | -8.615850e-47 |
| Msa0054640 | Msa1394450 | 0.804096 | 2.545351e-49 | -8.615850e-47 |
| Msa0054640 | Msa1397540 | 0.802124 | 6.509432e-49 | -8.615850e-47 |
| Msa0054640 | Msa1398480 | 0.808450 | 3.078992e-50 | -8.615850e-47 |
| Msa0054640 | Msa1418200 | 0.808571 | 2.901351e-50 | -8.615850e-47 |
| Msa0054640 | Msa1423450 | 0.823290 | 1.499526e-53 | -8.615850e-47 |
| Msa0054640 | Msa1427760 | 0.839709 | 1.347481e-57 | -8.615850e-47 |
| Msa0054640 | Msa1427820 | 0.803967 | 2.706652e-49 | -8.615850e-47 |
| Msa0054640 | Msa1427830 | 0.804661 | 1.940307e-49 | -8.615850e-47 |
| Msa0054640 | Msa1429250 | 0.805466 | 1.317097e-49 | -8.615850e-47 |
| Msa0054640 | Msa1431000 | 0.842549 | 2.416839e-58 | -8.615850e-47 |
| Msa0054640 | Msa1439960 | 0.807070 | 6.048187e-50 | -8.615850e-47 |
| Msa0054640 | Msa1447230 | 0.804748 | 1.861549e-49 | -8.615850e-47 |
| Msa0054640 | Msa1447560 | 0.801528 | 8.627565e-49 | -8.615850e-47 |
| Msa0054640 | Msa1454100 | 0.807784 | 4.267377e-50 | -8.615850e-47 |
| Msa0054640 | Msa1454290 | -0.801579 | 8.424807e-49 | -8.615850e-47 |
| Msa0054640 | Msa1456810 | 0.823548 | 1.305560e-53 | -8.615850e-47 |
| Msa0054640 | Msa1461250 | -0.824437 | 8.075874e-54 | -8.615850e-47 |
| Msa0054640 | Msa1465900 | 0.804767 | 1.844157e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054640 | MtrunA17_Chr8g0341541 | 64.706 | 119 | 32 | 1 | 2 | 120 | 123 | 231 | 6.71e-42 | 145 |
| Msa0054640 | MtrunA17_Chr1g0154541 | 82.857 | 70 | 12 | 0 | 1 | 70 | 24 | 93 | 3.54e-40 | 129 |
| Msa0054640 | MtrunA17_Chr8g0341561 | 51.087 | 92 | 43 | 1 | 31 | 120 | 1 | 92 | 2.44e-19 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0054640 | AT1G51720.4 | 55.932 | 118 | 42 | 2 | 3 | 120 | 124 | 231 | 9.26e-35 | 125 |
| Msa0054640 | AT1G51720.2 | 55.932 | 118 | 42 | 2 | 3 | 120 | 124 | 231 | 2.46e-34 | 124 |
| Msa0054640 | AT1G51720.1 | 55.932 | 118 | 42 | 2 | 3 | 120 | 124 | 231 | 2.68e-34 | 125 |
| Msa0054640 | AT1G51720.3 | 55.932 | 118 | 42 | 2 | 3 | 120 | 124 | 231 | 2.68e-34 | 125 |
Find 176 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATTGATTTAGAAAT+TGG | 0.182727 | 1_2:+9329921 | Msa0054640:five_prime_UTR |
| TTTCTGATCAAACATGATTT+TGG | 0.192248 | 1_2:-9331758 | None:intergenic |
| ATTCTAAAGCTACACTAAAA+AGG | 0.202720 | 1_2:+9331240 | Msa0054640:CDS |
| TGCTATGTCTGTAGAGAATT+TGG | 0.214183 | 1_2:+9330190 | Msa0054640:CDS |
| ATTGGTAATACTACAGTAAT+TGG | 0.223166 | 1_2:+9329959 | Msa0054640:five_prime_UTR |
| ATATTAATATTATCCTCTTT+TGG | 0.231847 | 1_2:-9331915 | None:intergenic |
| TTTATATTAGGTTTATATAT+TGG | 0.252291 | 1_2:-9331730 | None:intergenic |
| AATGGTTTGCCTGTTGAATC+TGG | 0.261134 | 1_2:+9332388 | Msa0054640:three_prime_UTR |
| GAGCATCTACATCTATGTTT+TGG | 0.271503 | 1_2:-9329157 | None:intergenic |
| TTGTATAATCTTTGCGCTCC+TGG | 0.276804 | 1_2:-9334648 | None:intergenic |
| CAGATTTCTGCTTTGTGCTC+TGG | 0.291560 | 1_2:-9334400 | None:intergenic |
| GTCAAGCCCGTTAACATAAA+AGG | 0.293370 | 1_2:+9330352 | Msa0054640:CDS |
| TTACATATTTATTGCATGTT+TGG | 0.293744 | 1_2:-9331811 | None:intergenic |
| CAAATTTGATGTAAAACTTA+AGG | 0.294936 | 1_2:+9331463 | Msa0054640:three_prime_UTR |
| TTCACTGTGAAGCATGTATT+TGG | 0.298588 | 1_2:-9331985 | None:intergenic |
| CACTTTCTTTCAAATTCTTA+AGG | 0.298986 | 1_2:+9329206 | Msa0054640:five_prime_UTR |
| ATCTGAGGAACTCCCTAAAA+TGG | 0.323801 | 1_2:+9334543 | Msa0054640:three_prime_UTR |
| AAAATATTTAAATCTAGATT+CGG | 0.324510 | 1_2:-9332009 | None:intergenic |
| ACACAGAATTTCATACAAAA+AGG | 0.336784 | 1_2:-9332235 | None:intergenic |
| AAATACAGTTCTAAAACATT+AGG | 0.336812 | 1_2:-9331403 | None:intergenic |
| AGTATTATATTAATGATAAT+CGG | 0.346642 | 1_2:+9332033 | Msa0054640:three_prime_UTR |
| TGTATAATCTTTGCGCTCCT+GGG | 0.347101 | 1_2:-9334647 | None:intergenic |
| ACTCTTCATGGGCAGGTGTT+AGG | 0.364413 | 1_2:-9334084 | None:intergenic |
| AGTAATTGGTGTGCCATTGC+GGG | 0.367017 | 1_2:+9329973 | Msa0054640:five_prime_UTR |
| AGTATTATATTAATGATAAT+CGG | 0.372934 | 1_2:+9332076 | Msa0054640:three_prime_UTR |
| TTCTGTGTAGTTTGAAAGTC+CGG | 0.374914 | 1_2:+9332250 | Msa0054640:three_prime_UTR |
| TGGTGTTTCGGAAATCAAAA+TGG | 0.376269 | 1_2:-9329137 | None:intergenic |
| AGGTTGTGAGGAGGTGTATT+GGG | 0.378063 | 1_2:+9331598 | Msa0054640:three_prime_UTR |
| CTCCTTTCAATGTAAACCTT+GGG | 0.381244 | 1_2:-9331626 | None:intergenic |
| CAGCATCAAAGTGGTGTAGA+TGG | 0.384070 | 1_2:+9332364 | Msa0054640:three_prime_UTR |
| GCATGTTTGGATACACAATA+TGG | 0.394437 | 1_2:-9331798 | None:intergenic |
| CTCTTCCATCAGCGAGGGAT+TGG | 0.401499 | 1_2:+9334333 | Msa0054640:three_prime_UTR |
| AAATTTGATGTAAAACTTAA+GGG | 0.402139 | 1_2:+9331464 | Msa0054640:three_prime_UTR |
| CTGTTGAATCTGGGTGTGCC+TGG | 0.408185 | 1_2:+9332398 | Msa0054640:three_prime_UTR |
| TCTGATCATGAAACTCTTCA+TGG | 0.408689 | 1_2:-9334096 | None:intergenic |
| TTCAATTAGTAGCGGATTTG+CGG | 0.410105 | 1_2:+9331962 | Msa0054640:three_prime_UTR |
| AGTGATCTTACAACGTATCT+TGG | 0.410668 | 1_2:+9332426 | Msa0054640:three_prime_UTR |
| GAGGTTGTGAGGAGGTGTAT+TGG | 0.413244 | 1_2:+9331597 | Msa0054640:three_prime_UTR |
| ATTCCAGTAAAATCTCTTGA+TGG | 0.413383 | 1_2:+9334445 | Msa0054640:three_prime_UTR |
| TCGTGAGGCCGAGTTCATTC+AGG | 0.413513 | 1_2:+9331268 | Msa0054640:CDS |
| TCCCACCAGCGTCAATAATC+TGG | 0.415486 | 1_2:-9332289 | None:intergenic |
| AAATATTTAAATCTAGATTC+GGG | 0.424799 | 1_2:-9332008 | None:intergenic |
| GCCCTTCTCTTTACCGCACG+TGG | 0.428781 | 1_2:+9331876 | Msa0054640:three_prime_UTR |
| GGAGATGAGCAGAATTCTAA+TGG | 0.428811 | 1_2:+9328985 | Msa0054640:five_prime_UTR |
| AAAATGGAAGATTTGAAGAA+TGG | 0.435371 | 1_2:-9329121 | None:intergenic |
| ATTCCAGTCGAATCGAGGTT+TGG | 0.437091 | 1_2:+9331535 | Msa0054640:three_prime_UTR |
| TCAAACAAAAGATGGTAGAT+AGG | 0.439997 | 1_2:-9332204 | None:intergenic |
| TGGACTTGGAGAACTTCAAT+TGG | 0.441003 | 1_2:+9329941 | Msa0054640:five_prime_UTR |
| AATGAGCTGTCACCTACAAA+TGG | 0.442025 | 1_2:+9330128 | Msa0054640:five_prime_UTR |
| GTGTGGCTTGAGATTGTGTT+CGG | 0.447874 | 1_2:-9332491 | None:intergenic |
| TGATATGAGTTCTATTCAAC+AGG | 0.450605 | 1_2:+9329869 | Msa0054640:five_prime_UTR |
| CAGGCACACCCAGATTCAAC+AGG | 0.452283 | 1_2:-9332397 | None:intergenic |
| CAAAGTGGTGTAGATGGAAA+TGG | 0.454103 | 1_2:+9332370 | Msa0054640:three_prime_UTR |
| GTTCAGATTTACATGGTTGA+GGG | 0.460325 | 1_2:+9332316 | Msa0054640:three_prime_UTR |
| TGATCAGACATTTGCTCCAC+AGG | 0.463827 | 1_2:+9334141 | Msa0054640:three_prime_UTR |
| CAGCTACCTTCATTCCCGTT+AGG | 0.464402 | 1_2:-9330232 | None:intergenic |
| AGTTCAGATTTACATGGTTG+AGG | 0.468878 | 1_2:+9332315 | Msa0054640:three_prime_UTR |
| AACCCAAGGTTTACATTGAA+AGG | 0.469453 | 1_2:+9331624 | Msa0054640:three_prime_UTR |
| ATCGACACAAGCCCATTTGT+AGG | 0.471123 | 1_2:-9330140 | None:intergenic |
| AAACCGGCTTGTAACTTGTA+AGG | 0.473647 | 1_2:-9331689 | None:intergenic |
| TCTCCTTTCAATGTAAACCT+TGG | 0.474054 | 1_2:-9331627 | None:intergenic |
| AGGCATCACTTGGTTGTGAT+TGG | 0.474545 | 1_2:+9329897 | Msa0054640:five_prime_UTR |
| TTCCATCAGCGAGGGATTGG+AGG | 0.477699 | 1_2:+9334336 | Msa0054640:three_prime_UTR |
| ATTGATTTAGAAATTGGACT+TGG | 0.482224 | 1_2:+9329927 | Msa0054640:five_prime_UTR |
| TTAACTCATCCATACAAAAC+CGG | 0.483519 | 1_2:-9331705 | None:intergenic |
| GCAGGCAGCTCCAGTGCTAG+TGG | 0.489009 | 1_2:+9334190 | Msa0054640:three_prime_UTR |
| GAGAGATATGTTGCTTATGA+TGG | 0.489533 | 1_2:+9331836 | Msa0054640:three_prime_UTR |
| CAGTAATTGGTGTGCCATTG+CGG | 0.489630 | 1_2:+9329972 | Msa0054640:five_prime_UTR |
| TCAATGTTGCTGCCGACCAC+TGG | 0.491799 | 1_2:+9329822 | Msa0054640:five_prime_UTR |
| ATGGTTTGCCTGTTGAATCT+GGG | 0.491828 | 1_2:+9332389 | Msa0054640:three_prime_UTR |
| AGACGCTTATTGTCTTCAAT+CGG | 0.493517 | 1_2:+9330306 | Msa0054640:CDS |
| GTTTACATTGAAAGGAGATA+AGG | 0.493782 | 1_2:+9331632 | Msa0054640:three_prime_UTR |
| CCATCGCGCCACTCACTACA+TGG | 0.498663 | 1_2:+9329076 | Msa0054640:five_prime_UTR |
| CTCAGATTCAGCAAGTGAAT+AGG | 0.498959 | 1_2:+9330074 | Msa0054640:five_prime_UTR |
| TTCTCTTTACCGCACGTGGG+TGG | 0.501934 | 1_2:+9331880 | Msa0054640:three_prime_UTR |
| TGAAAACATCAAACAAAAGA+TGG | 0.505067 | 1_2:-9332212 | None:intergenic |
| CAATCCCTCGCTGATGGAAG+AGG | 0.507485 | 1_2:-9334332 | None:intergenic |
| TCTTTACCGCACGTGGGTGG+AGG | 0.511049 | 1_2:+9331883 | Msa0054640:three_prime_UTR |
| ATTATTATTGTGATCTTCGA+GGG | 0.511112 | 1_2:-9330272 | None:intergenic |
| TTGTAAGATCACTTTGCGCC+AGG | 0.512310 | 1_2:-9332416 | None:intergenic |
| CAGACATAGCAGAAAATCCT+TGG | 0.512560 | 1_2:-9330178 | None:intergenic |
| GTAGAAGTTCCGATGGATCA+TGG | 0.515239 | 1_2:+9334278 | Msa0054640:three_prime_UTR |
| CGCACGTGGGTGGAGGTTGG+TGG | 0.516607 | 1_2:+9331890 | Msa0054640:three_prime_UTR |
| TACCGCACGTGGGTGGAGGT+TGG | 0.518453 | 1_2:+9331887 | Msa0054640:three_prime_UTR |
| CATTAATATAATACTTGCAA+CGG | 0.520425 | 1_2:-9332068 | None:intergenic |
| TTGCTGCCGACCACTGGAGT+AGG | 0.520582 | 1_2:+9329828 | Msa0054640:five_prime_UTR |
| GAATGAGGTTGATGAGAAGC+AGG | 0.521334 | 1_2:+9334480 | Msa0054640:three_prime_UTR |
| TCATGAAACTCTTCATGGGC+AGG | 0.521376 | 1_2:-9334091 | None:intergenic |
| ACTATCACTTCCACTAGCAC+TGG | 0.522218 | 1_2:-9334200 | None:intergenic |
| ACCCTCCAATCCCTCGCTGA+TGG | 0.524742 | 1_2:-9334338 | None:intergenic |
| AAAGTAACAAGAACATAAAG+AGG | 0.526451 | 1_2:+9331578 | Msa0054640:three_prime_UTR |
| AACATCGGAGAAATCCTAAC+GGG | 0.526867 | 1_2:+9330218 | Msa0054640:CDS |
| AGAAATCCTAACGGGAATGA+AGG | 0.527355 | 1_2:+9330226 | Msa0054640:CDS |
| GCTTGTAACTTGTAAGGCAA+GGG | 0.530784 | 1_2:-9331683 | None:intergenic |
| TGAAAATAGTTTATAAAGAG+TGG | 0.532196 | 1_2:+9331657 | Msa0054640:three_prime_UTR |
| CAAACTCTTGAGAGAGTCAT+CGG | 0.533852 | 1_2:+9331308 | Msa0054640:CDS |
| GATTATAGTGACAGTAGGGC+AGG | 0.534366 | 1_2:+9334172 | Msa0054640:three_prime_UTR |
| ATGAGCTGTCACCTACAAAT+GGG | 0.538116 | 1_2:+9330129 | Msa0054640:five_prime_UTR |
| GGCTTGTAACTTGTAAGGCA+AGG | 0.539244 | 1_2:-9331684 | None:intergenic |
| GAGGTTGGTGGCCCCAAAAG+AGG | 0.539544 | 1_2:+9331902 | Msa0054640:three_prime_UTR |
| AATTATTATTGTGATCTTCG+AGG | 0.540997 | 1_2:-9330273 | None:intergenic |
| ACACCAAACCTCGATTCGAC+TGG | 0.541447 | 1_2:-9331538 | None:intergenic |
| AGCAGAAGTAGAAGTTCCGA+TGG | 0.544025 | 1_2:+9334271 | Msa0054640:three_prime_UTR |
| TCTTGTCAAAATGCGGTCAC+AGG | 0.545559 | 1_2:+9332465 | Msa0054640:three_prime_UTR |
| ACACAATATGGTGTCAAATG+TGG | 0.546797 | 1_2:-9331786 | None:intergenic |
| CACAATATGGTGTCAAATGT+GGG | 0.551299 | 1_2:-9331785 | None:intergenic |
| ACCCACGTGCGGTAAAGAGA+AGG | 0.554176 | 1_2:-9331878 | None:intergenic |
| GAAAGTAACAGTAGCGACAG+TGG | 0.556540 | 1_2:+9334223 | Msa0054640:three_prime_UTR |
| TACCAGATTATTGACGCTGG+TGG | 0.556709 | 1_2:+9332287 | Msa0054640:three_prime_UTR |
| ACAGGCACAGAGGCATCACT+TGG | 0.559286 | 1_2:+9329887 | Msa0054640:five_prime_UTR |
| GATTATTGACGCTGGTGGGA+AGG | 0.559463 | 1_2:+9332292 | Msa0054640:three_prime_UTR |
| ATGTCTGTAGAGAATTTGGC+TGG | 0.559466 | 1_2:+9330194 | Msa0054640:CDS |
| GAGAATTTGGCTGGAAACAT+CGG | 0.559645 | 1_2:+9330203 | Msa0054640:CDS |
| CTGATCATGAAACTCTTCAT+GGG | 0.568087 | 1_2:-9334095 | None:intergenic |
| TTGCCTTACAAGTTACAAGC+CGG | 0.568841 | 1_2:+9331686 | Msa0054640:three_prime_UTR |
| CCATGTAGTGAGTGGCGCGA+TGG | 0.569475 | 1_2:-9329076 | None:intergenic |
| TGGAAAATCTACGCAGAATG+AGG | 0.569803 | 1_2:+9334465 | Msa0054640:three_prime_UTR |
| TGTTGTTAAAAGTTGGAGTG+AGG | 0.570100 | 1_2:+9330105 | Msa0054640:five_prime_UTR |
| GGAAGGAGTTCAGATTTACA+TGG | 0.572256 | 1_2:+9332309 | Msa0054640:three_prime_UTR |
| GCGATGGAGATTGTGTTAAG+AGG | 0.574384 | 1_2:-9329060 | None:intergenic |
| ATTATAAAGTAACCGTTGCA+TGG | 0.579176 | 1_2:+9332099 | Msa0054640:three_prime_UTR |
| CCCTTCTCTTTACCGCACGT+GGG | 0.579977 | 1_2:+9331877 | Msa0054640:three_prime_UTR |
| GGAAGATTTGAAGAATGGAA+AGG | 0.583032 | 1_2:-9329116 | None:intergenic |
| GCATGTTGAGAGCAAGCAGA+TGG | 0.584090 | 1_2:+9330012 | Msa0054640:five_prime_UTR |
| AGCGACAGTGGAAGTGACAG+TGG | 0.584113 | 1_2:+9334235 | Msa0054640:three_prime_UTR |
| CCCACGTGCGGTAAAGAGAA+GGG | 0.584382 | 1_2:-9331877 | None:intergenic |
| AATCGATTCCAGTCGAATCG+AGG | 0.587256 | 1_2:+9331530 | Msa0054640:three_prime_UTR |
| CTGTGGATTTCAATTAGTAG+CGG | 0.587969 | 1_2:+9331954 | Msa0054640:three_prime_UTR |
| AAACTCTTGAGAGAGTCATC+GGG | 0.590180 | 1_2:+9331309 | Msa0054640:CDS |
| TCCATCAGCGAGGGATTGGA+GGG | 0.593348 | 1_2:+9334337 | Msa0054640:three_prime_UTR |
| ATATGATTATCAACAGCCCC+AGG | 0.594026 | 1_2:+9334630 | Msa0054640:three_prime_UTR |
| TTCATCCCTACTCCAGTGGT+CGG | 0.595067 | 1_2:-9329834 | None:intergenic |
| AAAATATGCAGAAGAGACAA+AGG | 0.596330 | 1_2:+9334600 | Msa0054640:three_prime_UTR |
| ACTCTCACTCCATGATCCAT+CGG | 0.596420 | 1_2:-9334287 | None:intergenic |
| GTATAATCTTTGCGCTCCTG+GGG | 0.596744 | 1_2:-9334646 | None:intergenic |
| ATATATAAGAATACCATCGC+AGG | 0.603433 | 1_2:+9332175 | Msa0054640:three_prime_UTR |
| CAAGAGTTTGAACTACCTTG+TGG | 0.604602 | 1_2:-9331295 | None:intergenic |
| ACCAGATTATTGACGCTGGT+GGG | 0.607256 | 1_2:+9332288 | Msa0054640:three_prime_UTR |
| TGAGAGCAAGCAGATGGTGG+TGG | 0.612195 | 1_2:+9330018 | Msa0054640:five_prime_UTR |
| TGAATGAACTCGGCCTCACG+AGG | 0.613144 | 1_2:-9331266 | None:intergenic |
| CTTGTAACTTGTAAGGCAAG+GGG | 0.613780 | 1_2:-9331682 | None:intergenic |
| AGGAGCGCAAAGATTATACA+AGG | 0.614784 | 1_2:+9334650 | Msa0054640:three_prime_UTR |
| TTAGGTACTGATCTGAGTTG+TGG | 0.617162 | 1_2:+9330479 | Msa0054640:intron |
| TGCTGCCGACCACTGGAGTA+GGG | 0.617548 | 1_2:+9329829 | Msa0054640:five_prime_UTR |
| CACCAACCTCCACCCACGTG+CGG | 0.622694 | 1_2:-9331889 | None:intergenic |
| TCTGCAAAAGATCCCCGCAA+TGG | 0.624441 | 1_2:-9329986 | None:intergenic |
| CTAAGAATCTTGTCAAAATG+CGG | 0.624992 | 1_2:+9332458 | Msa0054640:three_prime_UTR |
| ATGTGAAAGACGGAATGCCA+AGG | 0.626691 | 1_2:+9330161 | Msa0054640:exon |
| AGATAGGAACTAACCTGCGA+TGG | 0.630479 | 1_2:-9332188 | None:intergenic |
| TTCACCACACGTGCATACTG+TGG | 0.631677 | 1_2:+9331937 | Msa0054640:three_prime_UTR |
| AAGAACATAAAGAGGTTGTG+AGG | 0.633363 | 1_2:+9331586 | Msa0054640:three_prime_UTR |
| GTAATTGGTGTGCCATTGCG+GGG | 0.634642 | 1_2:+9329974 | Msa0054640:five_prime_UTR |
| GTTCATTCAGGCAGTCCACA+AGG | 0.636078 | 1_2:+9331280 | Msa0054640:CDS |
| GTGGACTGCCTGAATGAACT+CGG | 0.638172 | 1_2:-9331276 | None:intergenic |
| GGGATTGGAGGGTACTGATG+AGG | 0.640194 | 1_2:+9334348 | Msa0054640:three_prime_UTR |
| GATCAGACATTTGCTCCACA+TGG | 0.640613 | 1_2:+9334112 | Msa0054640:three_prime_UTR |
| CATCATCACCATGTAGTGAG+TGG | 0.643124 | 1_2:-9329084 | None:intergenic |
| AGCTTTGAACAGCATCAAAG+TGG | 0.644455 | 1_2:+9332355 | Msa0054640:three_prime_UTR |
| GATACCTCTTCCATCAGCGA+GGG | 0.647002 | 1_2:+9334328 | Msa0054640:three_prime_UTR |
| AACATAAAGAGGTTGTGAGG+AGG | 0.648063 | 1_2:+9331589 | Msa0054640:three_prime_UTR |
| TCGTACCAGATTATTGACGC+TGG | 0.652352 | 1_2:+9332284 | Msa0054640:three_prime_UTR |
| CAGACATTTGCTCCACAGGG+AGG | 0.660250 | 1_2:+9334145 | Msa0054640:three_prime_UTR |
| AAACATCGGAGAAATCCTAA+CGG | 0.661748 | 1_2:+9330217 | Msa0054640:CDS |
| ATAATTCATCCCTACTCCAG+TGG | 0.662386 | 1_2:-9329838 | None:intergenic |
| TGGAGTGAGAGTAGTAGTGA+CGG | 0.666612 | 1_2:+9334298 | Msa0054640:three_prime_UTR |
| AAATTAGGTACACCATGCAA+CGG | 0.675669 | 1_2:-9332111 | None:intergenic |
| GATCAGACATTTGCTCCACA+GGG | 0.681606 | 1_2:+9334142 | Msa0054640:three_prime_UTR |
| TGTTGAGAGCAAGCAGATGG+TGG | 0.681866 | 1_2:+9330015 | Msa0054640:five_prime_UTR |
| GCTTGTGTCGATGTGAAAGA+CGG | 0.687824 | 1_2:+9330151 | Msa0054640:five_prime_UTR |
| AGTAGGGATGAATTATGCAA+TGG | 0.690983 | 1_2:+9329845 | Msa0054640:five_prime_UTR |
| GTCTGATCATGAAGTCCATG+TGG | 0.692214 | 1_2:-9334127 | None:intergenic |
| AAATCCACAGTATGCACGTG+TGG | 0.703677 | 1_2:-9331941 | None:intergenic |
| TGATACCTCTTCCATCAGCG+AGG | 0.704191 | 1_2:+9334327 | Msa0054640:three_prime_UTR |
| CTATAATCAAAACCTCCCTG+TGG | 0.708081 | 1_2:-9334157 | None:intergenic |
| GTTCTATTCAACAGGCACAG+AGG | 0.726872 | 1_2:+9329877 | Msa0054640:five_prime_UTR |
| AGTGTGTGACAATACTTGTG+TGG | 0.743585 | 1_2:-9332508 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAATTTAATATTATTC+AGG | - | chr1_2:9331060-9331079 | None:intergenic | 10.0% |
| !! | TTTATATTAGGTTTATATAT+TGG | - | chr1_2:9331733-9331752 | None:intergenic | 10.0% |
| !!! | ATTTTGGTAAAATTTATATT+AGG | - | chr1_2:9331745-9331764 | None:intergenic | 10.0% |
| !! | AAAATATTTAAATCTAGATT+CGG | - | chr1_2:9332012-9332031 | None:intergenic | 10.0% |
| !! | AGTATTATATTAATGATAAT+CGG | + | chr1_2:9332033-9332052 | Msa0054640:three_prime_UTR | 10.0% |
| !! | AGTATTATATTAATGATAAT+CGG | + | chr1_2:9332033-9332052 | Msa0054640:three_prime_UTR | 10.0% |
| !!! | TATCTTAATATATTTTTAGA+TGG | + | chr1_2:9332710-9332729 | Msa0054640:intron | 10.0% |
| !! | CAAATTTGATTATTATTTGT+GGG | + | chr1_2:9329270-9329289 | Msa0054640:intron | 15.0% |
| !! | AAATGATTGTTAATTGAAAT+AGG | + | chr1_2:9329403-9329422 | Msa0054640:intron | 15.0% |
| !! | ATTCACATAATAATATCAAA+AGG | - | chr1_2:9329694-9329713 | None:intergenic | 15.0% |
| !!! | TTTAATATGATTTCTAAAAG+AGG | + | chr1_2:9329726-9329745 | Msa0054640:intron | 15.0% |
| !!! | ATTTTTCTAATATTTGAGTT+AGG | + | chr1_2:9330461-9330480 | Msa0054640:intron | 15.0% |
| !! | ACCAATAATTAAAATGATTT+GGG | - | chr1_2:9330527-9330546 | None:intergenic | 15.0% |
| !!! | TTTAATTTCTTGATAAAAGA+TGG | + | chr1_2:9331148-9331167 | Msa0054640:intron | 15.0% |
| !! | AAATTTGATGTAAAACTTAA+GGG | + | chr1_2:9331464-9331483 | Msa0054640:three_prime_UTR | 15.0% |
| !!! | TATTAATATTATCCTCTTTT+GGG | - | chr1_2:9331917-9331936 | None:intergenic | 15.0% |
| !!! | ATATTAATATTATCCTCTTT+TGG | - | chr1_2:9331918-9331937 | None:intergenic | 15.0% |
| !! | AAATATTTAAATCTAGATTC+GGG | - | chr1_2:9332011-9332030 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGTTAATTTATCA+CGG | + | chr1_2:9332633-9332652 | Msa0054640:intron | 15.0% |
| !! | ACTTTATGTGAAAATAAAAT+CGG | - | chr1_2:9333724-9333743 | None:intergenic | 15.0% |
| !! | GCAAATTTGATTATTATTTG+TGG | + | chr1_2:9329269-9329288 | Msa0054640:intron | 20.0% |
| !! | TTCAAACTCAAATAAAGTAA+TGG | - | chr1_2:9329328-9329347 | None:intergenic | 20.0% |
| !! | AATAGGTACTCATTAAATAT+AGG | + | chr1_2:9329420-9329439 | Msa0054640:intron | 20.0% |
| !! | ATAGGTACTCATTAAATATA+GGG | + | chr1_2:9329421-9329440 | Msa0054640:intron | 20.0% |
| !! | ACATTTATGTATTTGAAAGA+AGG | + | chr1_2:9329470-9329489 | Msa0054640:intron | 20.0% |
| !! | AGAAAAATGTTGTTAAAAGT+TGG | + | chr1_2:9330098-9330117 | Msa0054640:five_prime_UTR | 20.0% |
| !! | CATTAAATCAAATATGTTCA+TGG | + | chr1_2:9330428-9330447 | Msa0054640:intron | 20.0% |
| !! | CCAATAATTAAAATGATTTG+GGG | - | chr1_2:9330526-9330545 | None:intergenic | 20.0% |
| !! | GACCAATAATTAAAATGATT+TGG | - | chr1_2:9330528-9330547 | None:intergenic | 20.0% |
| !! | TATATATTCATCATGAACAT+GGG | - | chr1_2:9330550-9330569 | None:intergenic | 20.0% |
| !! | TTATATATTCATCATGAACA+TGG | - | chr1_2:9330551-9330570 | None:intergenic | 20.0% |
| !!! | GTTGAGAACATAATTTTATT+TGG | + | chr1_2:9330672-9330691 | Msa0054640:intron | 20.0% |
| !!! | AAATACAGTTCTAAAACATT+AGG | - | chr1_2:9331406-9331425 | None:intergenic | 20.0% |
| !! | CAAATTTGATGTAAAACTTA+AGG | + | chr1_2:9331463-9331482 | Msa0054640:three_prime_UTR | 20.0% |
| !! | TGAAAATAGTTTATAAAGAG+TGG | + | chr1_2:9331657-9331676 | Msa0054640:three_prime_UTR | 20.0% |
| !! | TTACATATTTATTGCATGTT+TGG | - | chr1_2:9331814-9331833 | None:intergenic | 20.0% |
| !!! | ATTAATATTATCCTCTTTTG+GGG | - | chr1_2:9331916-9331935 | None:intergenic | 20.0% |
| !! | CATTAATATAATACTTGCAA+CGG | - | chr1_2:9332071-9332090 | None:intergenic | 20.0% |
| !!! | TTTTGGAAAACAATCAAATT+AGG | - | chr1_2:9332129-9332148 | None:intergenic | 20.0% |
| !! | AATTAACAAGAAAAAGGATA+GGG | - | chr1_2:9332628-9332647 | None:intergenic | 20.0% |
| !! | AAATTAACAAGAAAAAGGAT+AGG | - | chr1_2:9332629-9332648 | None:intergenic | 20.0% |
| !! | GTGATAAATTAACAAGAAAA+AGG | - | chr1_2:9332634-9332653 | None:intergenic | 20.0% |
| !!! | ATATATTTTTAGATGGTAAG+TGG | + | chr1_2:9332717-9332736 | Msa0054640:intron | 20.0% |
| !!! | TAATGATTTTTATTTTGCTC+AGG | + | chr1_2:9332926-9332945 | Msa0054640:intron | 20.0% |
| !! | AATGGCAGAATATAAATAAT+AGG | + | chr1_2:9333249-9333268 | Msa0054640:intron | 20.0% |
| !!! | TTTTTATTGTAACATTTCCT+AGG | + | chr1_2:9333370-9333389 | Msa0054640:intron | 20.0% |
| !! | ACAATGGAAATTAATATTGA+TGG | - | chr1_2:9333443-9333462 | None:intergenic | 20.0% |
| !! | ATCAATATTAATTTCCATTG+TGG | + | chr1_2:9333442-9333461 | Msa0054640:intron | 20.0% |
| !!! | GTTAATTGTCTTATTGTTAT+TGG | - | chr1_2:9333534-9333553 | None:intergenic | 20.0% |
| ! | AAAATGGAAGATTTGAAGAA+TGG | - | chr1_2:9329124-9329143 | None:intergenic | 25.0% |
| ! | CACTTTCTTTCAAATTCTTA+AGG | + | chr1_2:9329206-9329225 | Msa0054640:five_prime_UTR | 25.0% |
| ! | GTATTTGAAAGAAGGAATAT+TGG | + | chr1_2:9329478-9329497 | Msa0054640:intron | 25.0% |
| !! | GAAAAAAGTTTGTTCCTAAA+CGG | - | chr1_2:9329672-9329691 | None:intergenic | 25.0% |
| !! | GACAGAAAACGAATAATTTT+AGG | + | chr1_2:9329777-9329796 | Msa0054640:intron | 25.0% |
| !!! | AACGAATAATTTTAGGTTTG+CGG | + | chr1_2:9329784-9329803 | Msa0054640:intron | 25.0% |
| !! | GAAGAGATTGATTTAGAAAT+TGG | + | chr1_2:9329921-9329940 | Msa0054640:five_prime_UTR | 25.0% |
| !! | ATTGATTTAGAAATTGGACT+TGG | + | chr1_2:9329927-9329946 | Msa0054640:five_prime_UTR | 25.0% |
| !! | ATTGGTAATACTACAGTAAT+TGG | + | chr1_2:9329959-9329978 | Msa0054640:five_prime_UTR | 25.0% |
| ! | ATTATTATTGTGATCTTCGA+GGG | - | chr1_2:9330275-9330294 | None:intergenic | 25.0% |
| ! | AATTATTATTGTGATCTTCG+AGG | - | chr1_2:9330276-9330295 | None:intergenic | 25.0% |
| !! | AGCTGTAATTTTATATTTGG+AGG | - | chr1_2:9330332-9330351 | None:intergenic | 25.0% |
| !! | GACAGCTGTAATTTTATATT+TGG | - | chr1_2:9330335-9330354 | None:intergenic | 25.0% |
| !!! | CCCCAAATCATTTTAATTAT+TGG | + | chr1_2:9330523-9330542 | Msa0054640:intron | 25.0% |
| ! | AACTCTAAACAGAATAAACA+GGG | - | chr1_2:9330851-9330870 | None:intergenic | 25.0% |
| ! | AAACTCTAAACAGAATAAAC+AGG | - | chr1_2:9330852-9330871 | None:intergenic | 25.0% |
| !! | TATTCTGTTTAGAGTTTGTT+TGG | + | chr1_2:9330855-9330874 | Msa0054640:intron | 25.0% |
| ! | CTTCAATCATAGAAATTGTT+AGG | - | chr1_2:9331194-9331213 | None:intergenic | 25.0% |
| !!! | ATTCTAAAGCTACACTAAAA+AGG | + | chr1_2:9331240-9331259 | Msa0054640:CDS | 25.0% |
| !!! | TTCTAAAGCTACACTAAAAA+GGG | + | chr1_2:9331241-9331260 | Msa0054640:CDS | 25.0% |
| ! | AAAGTAACAAGAACATAAAG+AGG | + | chr1_2:9331578-9331597 | Msa0054640:three_prime_UTR | 25.0% |
| !! | TTTCTGATCAAACATGATTT+TGG | - | chr1_2:9331761-9331780 | None:intergenic | 25.0% |
| !!! | CTTATGATGGACTAAAAAAT+GGG | + | chr1_2:9331849-9331868 | Msa0054640:three_prime_UTR | 25.0% |
| !! | AAAAAAGTTTGTCACGTTTT+TGG | - | chr1_2:9332146-9332165 | None:intergenic | 25.0% |
| ! | TGAAAACATCAAACAAAAGA+TGG | - | chr1_2:9332215-9332234 | None:intergenic | 25.0% |
| ! | ACACAGAATTTCATACAAAA+AGG | - | chr1_2:9332238-9332257 | None:intergenic | 25.0% |
| !! | AGACAATATTTTCAAAGACA+TGG | - | chr1_2:9332584-9332603 | None:intergenic | 25.0% |
| ! | CTTCTAAATGAATTGATTAG+TGG | + | chr1_2:9333192-9333211 | Msa0054640:intron | 25.0% |
| ! | TAAATGAATTGATTAGTGGT+GGG | + | chr1_2:9333196-9333215 | Msa0054640:intron | 25.0% |
| !!! | ATAATAGGATTAGCTATTCT+TGG | + | chr1_2:9333264-9333283 | Msa0054640:intron | 25.0% |
| !!! | TAATAGGATTAGCTATTCTT+GGG | + | chr1_2:9333265-9333284 | Msa0054640:intron | 25.0% |
| ! | CTAGTGTTAAAAGTCTAAAT+AGG | + | chr1_2:9333656-9333675 | Msa0054640:intron | 25.0% |
| ! | GTGCACCTTAAATAAATTAT+GGG | - | chr1_2:9333787-9333806 | None:intergenic | 25.0% |
| ! | AGTGCACCTTAAATAAATTA+TGG | - | chr1_2:9333788-9333807 | None:intergenic | 25.0% |
| ! | TAAATAGTCTAATAGCTACA+TGG | + | chr1_2:9333941-9333960 | Msa0054640:intron | 25.0% |
| ! | TTGAATTTAAAGAGAATGAG+AGG | - | chr1_2:9334030-9334049 | None:intergenic | 25.0% |
| !!! | TTTTGATTATAGTGACAGTA+GGG | + | chr1_2:9334168-9334187 | Msa0054640:three_prime_UTR | 25.0% |
| !! | TTTTCTAACTCTATCAGAAA+TGG | - | chr1_2:9334584-9334603 | None:intergenic | 25.0% |
| !!! | AAGGAGTTTGTTTTATGAAA+GGG | + | chr1_2:9334669-9334688 | Msa0054640:three_prime_UTR | 25.0% |
| TGCTTACCCAACAAAAAAAA+AGG | + | chr1_2:9329014-9329033 | Msa0054640:five_prime_UTR | 30.0% | |
| !!! | GTATGGCCTTTTTTTTTGTT+GGG | - | chr1_2:9329023-9329042 | None:intergenic | 30.0% |
| !!! | TGTATGGCCTTTTTTTTTGT+TGG | - | chr1_2:9329024-9329043 | None:intergenic | 30.0% |
| !!! | ACATCTATGTTTTGGTGTTT+CGG | - | chr1_2:9329152-9329171 | None:intergenic | 30.0% |
| GATTATTATTTGTGGGTCAT+TGG | + | chr1_2:9329277-9329296 | Msa0054640:intron | 30.0% | |
| AAAATTATGAGCTTCTGTTG+TGG | + | chr1_2:9329370-9329389 | Msa0054640:intron | 30.0% | |
| CTCATTAAATATAGGGTTGA+TGG | + | chr1_2:9329428-9329447 | Msa0054640:intron | 30.0% | |
| TCAAAATAGTAGCATTGTCA+AGG | - | chr1_2:9329504-9329523 | None:intergenic | 30.0% | |
| ATTGCTTGGCTTAATTTAGT+TGG | - | chr1_2:9329547-9329566 | None:intergenic | 30.0% | |
| TGAATGATACTTCAGATTGA+TGG | + | chr1_2:9329577-9329596 | Msa0054640:intron | 30.0% | |
| TGATATGAGTTCTATTCAAC+AGG | + | chr1_2:9329869-9329888 | Msa0054640:five_prime_UTR | 30.0% | |
| AGATGTCAAAAAGATGCATT+TGG | + | chr1_2:9330583-9330602 | Msa0054640:intron | 30.0% | |
| AGTGGTCAATAAAAATGGTA+AGG | - | chr1_2:9330760-9330779 | None:intergenic | 30.0% | |
| TGCAAAGTGGTCAATAAAAA+TGG | - | chr1_2:9330765-9330784 | None:intergenic | 30.0% | |
| ACTCTAAACAGAATAAACAG+GGG | - | chr1_2:9330850-9330869 | None:intergenic | 30.0% | |
| ATCAATCTCTGTATCTGTTA+TGG | + | chr1_2:9330984-9331003 | Msa0054640:intron | 30.0% | |
| TGCACACTGAAATTTCAAAA+TGG | - | chr1_2:9331094-9331113 | None:intergenic | 30.0% | |
| AATTAAATAGTGCGCAGTTA+AGG | - | chr1_2:9331135-9331154 | None:intergenic | 30.0% | |
| ! | AAAAGATGGTTGCATTGTTT+TGG | + | chr1_2:9331162-9331181 | Msa0054640:intron | 30.0% |
| ! | AAAGATGGTTGCATTGTTTT+GGG | + | chr1_2:9331163-9331182 | Msa0054640:intron | 30.0% |
| GTTTACATTGAAAGGAGATA+AGG | + | chr1_2:9331632-9331651 | Msa0054640:three_prime_UTR | 30.0% | |
| TTAACTCATCCATACAAAAC+CGG | - | chr1_2:9331708-9331727 | None:intergenic | 30.0% | |
| !! | GCTTATGATGGACTAAAAAA+TGG | + | chr1_2:9331848-9331867 | Msa0054640:three_prime_UTR | 30.0% |
| ATTATAAAGTAACCGTTGCA+TGG | + | chr1_2:9332056-9332075 | Msa0054640:three_prime_UTR | 30.0% | |
| ATATATAAGAATACCATCGC+AGG | + | chr1_2:9332175-9332194 | Msa0054640:three_prime_UTR | 30.0% | |
| TCAAACAAAAGATGGTAGAT+AGG | - | chr1_2:9332207-9332226 | None:intergenic | 30.0% | |
| CTAAGAATCTTGTCAAAATG+CGG | + | chr1_2:9332458-9332477 | Msa0054640:three_prime_UTR | 30.0% | |
| ! | TAAGGAGTGTATAACAAGTA+AGG | - | chr1_2:9332534-9332553 | None:intergenic | 30.0% |
| ! | TAAGAGTGTGATAACAAGTA+AGG | - | chr1_2:9332552-9332571 | None:intergenic | 30.0% |
| TGTTAATGAGAACATACACA+TGG | + | chr1_2:9332671-9332690 | Msa0054640:intron | 30.0% | |
| ! | ACTCGCATTTATAACTTTTG+AGG | + | chr1_2:9332769-9332788 | Msa0054640:intron | 30.0% |
| ! | CTCGCATTTATAACTTTTGA+GGG | + | chr1_2:9332770-9332789 | Msa0054640:intron | 30.0% |
| !!! | GCTTAGTTTTAAAGTCTTGA+CGG | + | chr1_2:9332869-9332888 | Msa0054640:intron | 30.0% |
| !! | TAGTATGCATGTTTTTGAAG+GGG | - | chr1_2:9333065-9333084 | None:intergenic | 30.0% |
| !! | CTAGTATGCATGTTTTTGAA+GGG | - | chr1_2:9333066-9333085 | None:intergenic | 30.0% |
| TGATTATTGTGGAATATGGT+AGG | + | chr1_2:9333098-9333117 | Msa0054640:intron | 30.0% | |
| GATTATTGTGGAATATGGTA+GGG | + | chr1_2:9333099-9333118 | Msa0054640:intron | 30.0% | |
| ATTATTGTGGAATATGGTAG+GGG | + | chr1_2:9333100-9333119 | Msa0054640:intron | 30.0% | |
| CTAAATGAATTGATTAGTGG+TGG | + | chr1_2:9333195-9333214 | Msa0054640:intron | 30.0% | |
| ! | AAAGTCTTTTACAGGTCAAA+TGG | - | chr1_2:9333613-9333632 | None:intergenic | 30.0% |
| ! | TTTTCACATAAAGTTAACCG+TGG | + | chr1_2:9333730-9333749 | Msa0054640:intron | 30.0% |
| TTGGGCCCATAATTTATTTA+AGG | + | chr1_2:9333779-9333798 | Msa0054640:intron | 30.0% | |
| TAACGAAAAAAAAGGGTTCT+AGG | - | chr1_2:9333865-9333884 | None:intergenic | 30.0% | |
| TGCACTGTAACGAAAAAAAA+GGG | - | chr1_2:9333872-9333891 | None:intergenic | 30.0% | |
| ! | GTTAGGTTATGATTTTCTTC+AGG | - | chr1_2:9334070-9334089 | None:intergenic | 30.0% |
| !!! | GTTTTGATTATAGTGACAGT+AGG | + | chr1_2:9334167-9334186 | Msa0054640:three_prime_UTR | 30.0% |
| ! | TCAAGAGATTTTACTGGAAT+GGG | - | chr1_2:9334445-9334464 | None:intergenic | 30.0% |
| ! | ATCAAGAGATTTTACTGGAA+TGG | - | chr1_2:9334446-9334465 | None:intergenic | 30.0% |
| ATTCCAGTAAAATCTCTTGA+TGG | + | chr1_2:9334445-9334464 | Msa0054640:three_prime_UTR | 30.0% | |
| ! | TTTCCATCAAGAGATTTTAC+TGG | - | chr1_2:9334451-9334470 | None:intergenic | 30.0% |
| TATTGAAAAAGACTCATCTG+AGG | + | chr1_2:9334528-9334547 | Msa0054640:three_prime_UTR | 30.0% | |
| AAAATATGCAGAAGAGACAA+AGG | + | chr1_2:9334600-9334619 | Msa0054640:three_prime_UTR | 30.0% | |
| !!! | CAAGGAGTTTGTTTTATGAA+AGG | + | chr1_2:9334668-9334687 | Msa0054640:three_prime_UTR | 30.0% |
| !!! | AGGAGTTTGTTTTATGAAAG+GGG | + | chr1_2:9334670-9334689 | Msa0054640:three_prime_UTR | 30.0% |
| ! | TGTTCGTGTTGCATTTTGTA+TGG | - | chr1_2:9329040-9329059 | None:intergenic | 35.0% |
| GGAAGATTTGAAGAATGGAA+AGG | - | chr1_2:9329119-9329138 | None:intergenic | 35.0% | |
| TGGTGTTTCGGAAATCAAAA+TGG | - | chr1_2:9329140-9329159 | None:intergenic | 35.0% | |
| ! | GAGCATCTACATCTATGTTT+TGG | - | chr1_2:9329160-9329179 | None:intergenic | 35.0% |
| CATGATGAAATCAAGCTTCT+GGG | + | chr1_2:9329240-9329259 | Msa0054640:intron | 35.0% | |
| ! | TTCAGCTTTATAGCATTGCT+TGG | - | chr1_2:9329561-9329580 | None:intergenic | 35.0% |
| GTCATATCTAGTGTTTGTGT+CGG | + | chr1_2:9329633-9329652 | Msa0054640:intron | 35.0% | |
| !!! | ATAATTTTAGGTTTGCGGAG+AGG | + | chr1_2:9329789-9329808 | Msa0054640:intron | 35.0% |
| !!! | TAATTTTAGGTTTGCGGAGA+GGG | + | chr1_2:9329790-9329809 | Msa0054640:intron | 35.0% |
| AGTAGGGATGAATTATGCAA+TGG | + | chr1_2:9329845-9329864 | Msa0054640:five_prime_UTR | 35.0% | |
| TGTTGTTAAAAGTTGGAGTG+AGG | + | chr1_2:9330105-9330124 | Msa0054640:five_prime_UTR | 35.0% | |
| TGCTATGTCTGTAGAGAATT+TGG | + | chr1_2:9330190-9330209 | Msa0054640:CDS | 35.0% | |
| AAACATCGGAGAAATCCTAA+CGG | + | chr1_2:9330217-9330236 | Msa0054640:CDS | 35.0% | |
| AGACGCTTATTGTCTTCAAT+CGG | + | chr1_2:9330306-9330325 | Msa0054640:CDS | 35.0% | |
| ! | TGGCCAACCTTTTATGTTAA+CGG | - | chr1_2:9330362-9330381 | None:intergenic | 35.0% |
| TGATCAAATGTTGAATGCTG+CGG | - | chr1_2:9330645-9330664 | None:intergenic | 35.0% | |
| GGTGTTTCCAGATAATTCTA+TGG | + | chr1_2:9330693-9330712 | Msa0054640:intron | 35.0% | |
| TCGTATGCCATAGAATTATC+TGG | - | chr1_2:9330703-9330722 | None:intergenic | 35.0% | |
| TAAGAGGGAACAAGGAAAAA+TGG | - | chr1_2:9330726-9330745 | None:intergenic | 35.0% | |
| !! | TCAGTGACAGAATCTAGTTT+TGG | + | chr1_2:9330789-9330808 | Msa0054640:intron | 35.0% |
| !!! | CAGTGACAGAATCTAGTTTT+GGG | + | chr1_2:9330790-9330809 | Msa0054640:intron | 35.0% |
| ACAGATACAGAGATTGATAG+AGG | - | chr1_2:9330982-9331001 | None:intergenic | 35.0% | |
| AGCTGTAATGTCAAAAACAG+TGG | + | chr1_2:9331212-9331231 | Msa0054640:intron | 35.0% | |
| GCTGTAATGTCAAAAACAGT+GGG | + | chr1_2:9331213-9331232 | Msa0054640:intron | 35.0% | |
| !!! | CTCAGTGAGTTTTGTTCAAA+TGG | + | chr1_2:9331339-9331358 | Msa0054640:exon | 35.0% |
| AAGAACATAAAGAGGTTGTG+AGG | + | chr1_2:9331586-9331605 | Msa0054640:three_prime_UTR | 35.0% | |
| AACCCAAGGTTTACATTGAA+AGG | + | chr1_2:9331624-9331643 | Msa0054640:three_prime_UTR | 35.0% | |
| CTCCTTTCAATGTAAACCTT+GGG | - | chr1_2:9331629-9331648 | None:intergenic | 35.0% | |
| TCTCCTTTCAATGTAAACCT+TGG | - | chr1_2:9331630-9331649 | None:intergenic | 35.0% | |
| ! | CACAATATGGTGTCAAATGT+GGG | - | chr1_2:9331788-9331807 | None:intergenic | 35.0% |
| ! | ACACAATATGGTGTCAAATG+TGG | - | chr1_2:9331789-9331808 | None:intergenic | 35.0% |
| GCATGTTTGGATACACAATA+TGG | - | chr1_2:9331801-9331820 | None:intergenic | 35.0% | |
| ! | GAGAGATATGTTGCTTATGA+TGG | + | chr1_2:9331836-9331855 | Msa0054640:three_prime_UTR | 35.0% |
| !! | GATGGACTAAAAAATGGGTT+CGG | + | chr1_2:9331854-9331873 | Msa0054640:three_prime_UTR | 35.0% |
| CTGTGGATTTCAATTAGTAG+CGG | + | chr1_2:9331954-9331973 | Msa0054640:three_prime_UTR | 35.0% | |
| !! | TTCAATTAGTAGCGGATTTG+CGG | + | chr1_2:9331962-9331981 | Msa0054640:three_prime_UTR | 35.0% |
| TTCACTGTGAAGCATGTATT+TGG | - | chr1_2:9331988-9332007 | None:intergenic | 35.0% | |
| AAATTAGGTACACCATGCAA+CGG | - | chr1_2:9332114-9332133 | None:intergenic | 35.0% | |
| TTCTGTGTAGTTTGAAAGTC+CGG | + | chr1_2:9332250-9332269 | Msa0054640:three_prime_UTR | 35.0% | |
| TGGTACGAAGAAAAAACAAC+CGG | - | chr1_2:9332272-9332291 | None:intergenic | 35.0% | |
| AGTTCAGATTTACATGGTTG+AGG | + | chr1_2:9332315-9332334 | Msa0054640:three_prime_UTR | 35.0% | |
| GTTCAGATTTACATGGTTGA+GGG | + | chr1_2:9332316-9332335 | Msa0054640:three_prime_UTR | 35.0% | |
| AGTGATCTTACAACGTATCT+TGG | + | chr1_2:9332426-9332445 | Msa0054640:three_prime_UTR | 35.0% | |
| AATTTATCACGGCTTGCATT+TGG | + | chr1_2:9332644-9332663 | Msa0054640:intron | 35.0% | |
| GTGTTAAATTACTCGTGTCT+AGG | + | chr1_2:9332989-9333008 | Msa0054640:intron | 35.0% | |
| TAAATTACTCGTGTCTAGGT+TGG | + | chr1_2:9332993-9333012 | Msa0054640:intron | 35.0% | |
| !!! | TTTTGAAGGGGGTTTGTTAA+CGG | - | chr1_2:9333053-9333072 | None:intergenic | 35.0% |
| !! | AGTATGCATGTTTTTGAAGG+GGG | - | chr1_2:9333064-9333083 | None:intergenic | 35.0% |
| !! | CCTAGTATGCATGTTTTTGA+AGG | - | chr1_2:9333067-9333086 | None:intergenic | 35.0% |
| CCTTCAAAAACATGCATACT+AGG | + | chr1_2:9333064-9333083 | Msa0054640:intron | 35.0% | |
| ACATGCATACTAGGTGAAAT+TGG | + | chr1_2:9333073-9333092 | Msa0054640:intron | 35.0% | |
| CATGCATACTAGGTGAAATT+GGG | + | chr1_2:9333074-9333093 | Msa0054640:intron | 35.0% | |
| ATGCATACTAGGTGAAATTG+GGG | + | chr1_2:9333075-9333094 | Msa0054640:intron | 35.0% | |
| TGAAATTGGGGTGATTATTG+TGG | + | chr1_2:9333087-9333106 | Msa0054640:intron | 35.0% | |
| TTATTGTGGAATATGGTAGG+GGG | + | chr1_2:9333101-9333120 | Msa0054640:intron | 35.0% | |
| ! | TCTTGGGTGTAGATTGATTT+AGG | + | chr1_2:9333281-9333300 | Msa0054640:intron | 35.0% |
| CAGATCTTCTCTAAATTCCA+AGG | - | chr1_2:9333341-9333360 | None:intergenic | 35.0% | |
| TATAGAACAGTACAGTAGAG+CGG | - | chr1_2:9333477-9333496 | None:intergenic | 35.0% | |
| TGACCTGTAAAAGACTTTCT+TGG | + | chr1_2:9333615-9333634 | Msa0054640:intron | 35.0% | |
| ! | GAACCAAGAAAGTCTTTTAC+AGG | - | chr1_2:9333621-9333640 | None:intergenic | 35.0% |
| !!! | TACTGCAAGTGTGTCTTTTT+TGG | + | chr1_2:9333760-9333779 | Msa0054640:intron | 35.0% |
| !!! | ACTGCAAGTGTGTCTTTTTT+GGG | + | chr1_2:9333761-9333780 | Msa0054640:intron | 35.0% |
| GTGCACTGTAACGAAAAAAA+AGG | - | chr1_2:9333873-9333892 | None:intergenic | 35.0% | |
| ! | TTTTCGTTACAGTGCACATA+AGG | + | chr1_2:9333876-9333895 | Msa0054640:intron | 35.0% |
| ! | CACATAAGGTTTTCTGTGAA+TGG | + | chr1_2:9333890-9333909 | Msa0054640:intron | 35.0% |
| CTGATCATGAAACTCTTCAT+GGG | - | chr1_2:9334098-9334117 | None:intergenic | 35.0% | |
| TCTGATCATGAAACTCTTCA+TGG | - | chr1_2:9334099-9334118 | None:intergenic | 35.0% | |
| ! | AGATTTTACTGGAATGGGTA+AGG | - | chr1_2:9334440-9334459 | None:intergenic | 35.0% |
| GGAGATGAGCAGAATTCTAA+TGG | + | chr1_2:9328985-9329004 | Msa0054640:five_prime_UTR | 40.0% | |
| CCAGAAGCTTGATTTCATCA+TGG | - | chr1_2:9329242-9329261 | None:intergenic | 40.0% | |
| CCATGATGAAATCAAGCTTC+TGG | + | chr1_2:9329239-9329258 | Msa0054640:intron | 40.0% | |
| ! | ATGAGCTTCTGTTGTGGTTT+TGG | + | chr1_2:9329376-9329395 | Msa0054640:intron | 40.0% |
| ! | TGAGCTTCTGTTGTGGTTTT+GGG | + | chr1_2:9329377-9329396 | Msa0054640:intron | 40.0% |
| GTGCTTCATAGTTTCCGTTT+AGG | + | chr1_2:9329655-9329674 | Msa0054640:intron | 40.0% | |
| ATAATTCATCCCTACTCCAG+TGG | - | chr1_2:9329841-9329860 | None:intergenic | 40.0% | |
| TGGACTTGGAGAACTTCAAT+TGG | + | chr1_2:9329941-9329960 | Msa0054640:five_prime_UTR | 40.0% | |
| CTCAGATTCAGCAAGTGAAT+AGG | + | chr1_2:9330074-9330093 | Msa0054640:five_prime_UTR | 40.0% | |
| AATGAGCTGTCACCTACAAA+TGG | + | chr1_2:9330128-9330147 | Msa0054640:five_prime_UTR | 40.0% | |
| ATGAGCTGTCACCTACAAAT+GGG | + | chr1_2:9330129-9330148 | Msa0054640:five_prime_UTR | 40.0% | |
| CAGACATAGCAGAAAATCCT+TGG | - | chr1_2:9330181-9330200 | None:intergenic | 40.0% | |
| ATGTCTGTAGAGAATTTGGC+TGG | + | chr1_2:9330194-9330213 | Msa0054640:CDS | 40.0% | |
| GAGAATTTGGCTGGAAACAT+CGG | + | chr1_2:9330203-9330222 | Msa0054640:CDS | 40.0% | |
| AACATCGGAGAAATCCTAAC+GGG | + | chr1_2:9330218-9330237 | Msa0054640:CDS | 40.0% | |
| AGAAATCCTAACGGGAATGA+AGG | + | chr1_2:9330226-9330245 | Msa0054640:CDS | 40.0% | |
| GTCAAGCCCGTTAACATAAA+AGG | + | chr1_2:9330352-9330371 | Msa0054640:CDS | 40.0% | |
| AGCCCGTTAACATAAAAGGT+TGG | + | chr1_2:9330356-9330375 | Msa0054640:intron | 40.0% | |
| ! | GGCCAACCTTTTATGTTAAC+GGG | - | chr1_2:9330361-9330380 | None:intergenic | 40.0% |
| GCTATTATAGCATGCTGAGA+TGG | - | chr1_2:9330382-9330401 | None:intergenic | 40.0% | |
| !! | TTAGGTACTGATCTGAGTTG+TGG | + | chr1_2:9330479-9330498 | Msa0054640:intron | 40.0% |
| AAGGAACAACGAGAGTAAGA+GGG | - | chr1_2:9330741-9330760 | None:intergenic | 40.0% | |
| TAAGGAACAACGAGAGTAAG+AGG | - | chr1_2:9330742-9330761 | None:intergenic | 40.0% | |
| TGTCACTGACATATGCAAAG+TGG | - | chr1_2:9330778-9330797 | None:intergenic | 40.0% | |
| GGAAAGAAGCAGAAAGCTTT+CGG | - | chr1_2:9331039-9331058 | None:intergenic | 40.0% | |
| CAAGAGTTTGAACTACCTTG+TGG | - | chr1_2:9331298-9331317 | None:intergenic | 40.0% | |
| CAAACTCTTGAGAGAGTCAT+CGG | + | chr1_2:9331308-9331327 | Msa0054640:CDS | 40.0% | |
| AAACTCTTGAGAGAGTCATC+GGG | + | chr1_2:9331309-9331328 | Msa0054640:CDS | 40.0% | |
| AACATAAAGAGGTTGTGAGG+AGG | + | chr1_2:9331589-9331608 | Msa0054640:three_prime_UTR | 40.0% | |
| ! | CTTGTAACTTGTAAGGCAAG+GGG | - | chr1_2:9331685-9331704 | None:intergenic | 40.0% |
| ! | GCTTGTAACTTGTAAGGCAA+GGG | - | chr1_2:9331686-9331705 | None:intergenic | 40.0% |
| TTGCCTTACAAGTTACAAGC+CGG | + | chr1_2:9331686-9331705 | Msa0054640:three_prime_UTR | 40.0% | |
| !! | AAACCGGCTTGTAACTTGTA+AGG | - | chr1_2:9331692-9331711 | None:intergenic | 40.0% |
| !! | AGTTACAAGCCGGTTTTGTA+TGG | + | chr1_2:9331696-9331715 | Msa0054640:three_prime_UTR | 40.0% |
| GGAAGGAGTTCAGATTTACA+TGG | + | chr1_2:9332309-9332328 | Msa0054640:three_prime_UTR | 40.0% | |
| !! | AGCTTTGAACAGCATCAAAG+TGG | + | chr1_2:9332355-9332374 | Msa0054640:three_prime_UTR | 40.0% |
| CAAAGTGGTGTAGATGGAAA+TGG | + | chr1_2:9332370-9332389 | Msa0054640:three_prime_UTR | 40.0% | |
| ! | AATGGTTTGCCTGTTGAATC+TGG | + | chr1_2:9332388-9332407 | Msa0054640:three_prime_UTR | 40.0% |
| ! | ATGGTTTGCCTGTTGAATCT+GGG | + | chr1_2:9332389-9332408 | Msa0054640:three_prime_UTR | 40.0% |
| AGTGTGTGACAATACTTGTG+TGG | - | chr1_2:9332511-9332530 | None:intergenic | 40.0% | |
| AGATGGTAAGTGGTAACTAG+TGG | + | chr1_2:9332727-9332746 | Msa0054640:intron | 40.0% | |
| ATAAATGCCAAGCAACTGCT+AGG | + | chr1_2:9332832-9332851 | Msa0054640:intron | 40.0% | |
| TAAATGCCAAGCAACTGCTA+GGG | + | chr1_2:9332833-9332852 | Msa0054640:intron | 40.0% | |
| GGGGTGATTATTGTGGAATA+TGG | + | chr1_2:9333094-9333113 | Msa0054640:intron | 40.0% | |
| TAGGACAACTGTCAATTGCT+GGG | - | chr1_2:9333154-9333173 | None:intergenic | 40.0% | |
| TGTCCTAGCACTTAGTTAGT+TGG | + | chr1_2:9333167-9333186 | Msa0054640:intron | 40.0% | |
| AATAGAATCAGGGACAAGCA+AGG | + | chr1_2:9333224-9333243 | Msa0054640:intron | 40.0% | |
| ATAGAATCAGGGACAAGCAA+GGG | + | chr1_2:9333225-9333244 | Msa0054640:intron | 40.0% | |
| ! | GGTGTAGATTGATTTAGGAC+TGG | + | chr1_2:9333286-9333305 | Msa0054640:intron | 40.0% |
| ! | TGATTTAGGACTGGAGTAAG+TGG | + | chr1_2:9333295-9333314 | Msa0054640:intron | 40.0% |
| TCAACAAGATTGCAGAACCT+AGG | - | chr1_2:9333390-9333409 | None:intergenic | 40.0% | |
| TGATGGTTACTCACATCCTT+CGG | - | chr1_2:9333426-9333445 | None:intergenic | 40.0% | |
| ACTTGCAGTACTAGTATCCA+CGG | - | chr1_2:9333750-9333769 | None:intergenic | 40.0% | |
| CTATAATCAAAACCTCCCTG+TGG | - | chr1_2:9334160-9334179 | None:intergenic | 40.0% | |
| TGGAAAATCTACGCAGAATG+AGG | + | chr1_2:9334465-9334484 | Msa0054640:three_prime_UTR | 40.0% | |
| ATCTGAGGAACTCCCTAAAA+TGG | + | chr1_2:9334543-9334562 | Msa0054640:three_prime_UTR | 40.0% | |
| !! | TTGTAGTCAGCGCCATTTTA+GGG | - | chr1_2:9334558-9334577 | None:intergenic | 40.0% |
| !! | TTTGTAGTCAGCGCCATTTT+AGG | - | chr1_2:9334559-9334578 | None:intergenic | 40.0% |
| ATATGATTATCAACAGCCCC+AGG | + | chr1_2:9334630-9334649 | Msa0054640:three_prime_UTR | 40.0% | |
| TGTATAATCTTTGCGCTCCT+GGG | - | chr1_2:9334650-9334669 | None:intergenic | 40.0% | |
| TTGTATAATCTTTGCGCTCC+TGG | - | chr1_2:9334651-9334670 | None:intergenic | 40.0% | |
| ! | AGGAGCGCAAAGATTATACA+AGG | + | chr1_2:9334650-9334669 | Msa0054640:three_prime_UTR | 40.0% |
| GCGATGGAGATTGTGTTAAG+AGG | - | chr1_2:9329063-9329082 | None:intergenic | 45.0% | |
| CATCATCACCATGTAGTGAG+TGG | - | chr1_2:9329087-9329106 | None:intergenic | 45.0% | |
| GTTCTATTCAACAGGCACAG+AGG | + | chr1_2:9329877-9329896 | Msa0054640:five_prime_UTR | 45.0% | |
| AGGCATCACTTGGTTGTGAT+TGG | + | chr1_2:9329897-9329916 | Msa0054640:five_prime_UTR | 45.0% | |
| ! | CAGTAATTGGTGTGCCATTG+CGG | + | chr1_2:9329972-9329991 | Msa0054640:five_prime_UTR | 45.0% |
| ! | AGTAATTGGTGTGCCATTGC+GGG | + | chr1_2:9329973-9329992 | Msa0054640:five_prime_UTR | 45.0% |
| ATCGACACAAGCCCATTTGT+AGG | - | chr1_2:9330143-9330162 | None:intergenic | 45.0% | |
| ! | GCTTGTGTCGATGTGAAAGA+CGG | + | chr1_2:9330151-9330170 | Msa0054640:five_prime_UTR | 45.0% |
| ATGTGAAAGACGGAATGCCA+AGG | + | chr1_2:9330161-9330180 | Msa0054640:exon | 45.0% | |
| AACGAGAGTAAGAGGGAACA+AGG | - | chr1_2:9330734-9330753 | None:intergenic | 45.0% | |
| !!! | TCTAGTTTTGGGCAAAGCCT+TGG | + | chr1_2:9330801-9330820 | Msa0054640:intron | 45.0% |
| !!! | CTAGTTTTGGGCAAAGCCTT+GGG | + | chr1_2:9330802-9330821 | Msa0054640:intron | 45.0% |
| ! | GCTTCAGTGGGCTTTAGTTT+GGG | + | chr1_2:9330824-9330843 | Msa0054640:intron | 45.0% |
| ACTAAAAAGGGATCCTCGTG+AGG | + | chr1_2:9331253-9331272 | Msa0054640:CDS | 45.0% | |
| ! | AATCGATTCCAGTCGAATCG+AGG | + | chr1_2:9331530-9331549 | Msa0054640:three_prime_UTR | 45.0% |
| ATTCCAGTCGAATCGAGGTT+TGG | + | chr1_2:9331535-9331554 | Msa0054640:three_prime_UTR | 45.0% | |
| ! | AGGTTGTGAGGAGGTGTATT+GGG | + | chr1_2:9331598-9331617 | Msa0054640:three_prime_UTR | 45.0% |
| GGTGTATTGGGAAAAACCCA+AGG | + | chr1_2:9331610-9331629 | Msa0054640:three_prime_UTR | 45.0% | |
| ! | GGCTTGTAACTTGTAAGGCA+AGG | - | chr1_2:9331687-9331706 | None:intergenic | 45.0% |
| AAATCCACAGTATGCACGTG+TGG | - | chr1_2:9331944-9331963 | None:intergenic | 45.0% | |
| AGATAGGAACTAACCTGCGA+TGG | - | chr1_2:9332191-9332210 | None:intergenic | 45.0% | |
| TCGTACCAGATTATTGACGC+TGG | + | chr1_2:9332284-9332303 | Msa0054640:three_prime_UTR | 45.0% | |
| TACCAGATTATTGACGCTGG+TGG | + | chr1_2:9332287-9332306 | Msa0054640:three_prime_UTR | 45.0% | |
| ACCAGATTATTGACGCTGGT+GGG | + | chr1_2:9332288-9332307 | Msa0054640:three_prime_UTR | 45.0% | |
| CAGCATCAAAGTGGTGTAGA+TGG | + | chr1_2:9332364-9332383 | Msa0054640:three_prime_UTR | 45.0% | |
| TTGTAAGATCACTTTGCGCC+AGG | - | chr1_2:9332419-9332438 | None:intergenic | 45.0% | |
| TCTTGTCAAAATGCGGTCAC+AGG | + | chr1_2:9332465-9332484 | Msa0054640:three_prime_UTR | 45.0% | |
| GTGTGGCTTGAGATTGTGTT+CGG | - | chr1_2:9332494-9332513 | None:intergenic | 45.0% | |
| GTCAATTGCTGGGTTGTTAC+TGG | - | chr1_2:9333144-9333163 | None:intergenic | 45.0% | |
| CTAGGACAACTGTCAATTGC+TGG | - | chr1_2:9333155-9333174 | None:intergenic | 45.0% | |
| GCTCCAACTAACTAAGTGCT+AGG | - | chr1_2:9333173-9333192 | None:intergenic | 45.0% | |
| GTGGGAGCTCAATAGAATCA+GGG | + | chr1_2:9333214-9333233 | Msa0054640:intron | 45.0% | |
| TTAGGACTGGAGTAAGTGGA+AGG | + | chr1_2:9333299-9333318 | Msa0054640:intron | 45.0% | |
| TAGGACTGGAGTAAGTGGAA+GGG | + | chr1_2:9333300-9333319 | Msa0054640:intron | 45.0% | |
| !! | TTCCAAGGACTCTAGAATCC+AGG | - | chr1_2:9333326-9333345 | None:intergenic | 45.0% |
| TGATTCAGAGTTCAGACCGA+AGG | + | chr1_2:9333407-9333426 | Msa0054640:intron | 45.0% | |
| TCATGAAACTCTTCATGGGC+AGG | - | chr1_2:9334094-9334113 | None:intergenic | 45.0% | |
| GATCAGACATTTGCTCCACA+TGG | + | chr1_2:9334112-9334131 | Msa0054640:three_prime_UTR | 45.0% | |
| GTCTGATCATGAAGTCCATG+TGG | - | chr1_2:9334130-9334149 | None:intergenic | 45.0% | |
| TGATCAGACATTTGCTCCAC+AGG | + | chr1_2:9334111-9334130 | Msa0054640:three_prime_UTR | 45.0% | |
| GATCAGACATTTGCTCCACA+GGG | + | chr1_2:9334112-9334131 | Msa0054640:three_prime_UTR | 45.0% | |
| GATTATAGTGACAGTAGGGC+AGG | + | chr1_2:9334172-9334191 | Msa0054640:three_prime_UTR | 45.0% | |
| ACTATCACTTCCACTAGCAC+TGG | - | chr1_2:9334203-9334222 | None:intergenic | 45.0% | |
| GAAAGTAACAGTAGCGACAG+TGG | + | chr1_2:9334223-9334242 | Msa0054640:three_prime_UTR | 45.0% | |
| AGCAGAAGTAGAAGTTCCGA+TGG | + | chr1_2:9334271-9334290 | Msa0054640:three_prime_UTR | 45.0% | |
| GTAGAAGTTCCGATGGATCA+TGG | + | chr1_2:9334278-9334297 | Msa0054640:three_prime_UTR | 45.0% | |
| ACTCTCACTCCATGATCCAT+CGG | - | chr1_2:9334290-9334309 | None:intergenic | 45.0% | |
| TGGAGTGAGAGTAGTAGTGA+CGG | + | chr1_2:9334298-9334317 | Msa0054640:three_prime_UTR | 45.0% | |
| CAGATTTCTGCTTTGTGCTC+TGG | - | chr1_2:9334403-9334422 | None:intergenic | 45.0% | |
| !! | GAATGAGGTTGATGAGAAGC+AGG | + | chr1_2:9334480-9334499 | Msa0054640:three_prime_UTR | 45.0% |
| GTATAATCTTTGCGCTCCTG+GGG | - | chr1_2:9334649-9334668 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTTTAATTTACATT+AGG | - | chr1_2:9331503-9331522 | None:intergenic | 5.0% |
| TGCATCAACACACGTGGCAT+CGG | - | chr1_2:9329608-9329627 | None:intergenic | 50.0% | |
| CACTGATGCATCAACACACG+TGG | - | chr1_2:9329614-9329633 | None:intergenic | 50.0% | |
| TTCATCCCTACTCCAGTGGT+CGG | - | chr1_2:9329837-9329856 | None:intergenic | 50.0% | |
| ! | GTAATTGGTGTGCCATTGCG+GGG | + | chr1_2:9329974-9329993 | Msa0054640:five_prime_UTR | 50.0% |
| TCTGCAAAAGATCCCCGCAA+TGG | - | chr1_2:9329989-9330008 | None:intergenic | 50.0% | |
| ! | ATTGCGGGGATCTTTTGCAG+AGG | + | chr1_2:9329988-9330007 | Msa0054640:five_prime_UTR | 50.0% |
| GCATGTTGAGAGCAAGCAGA+TGG | + | chr1_2:9330012-9330031 | Msa0054640:five_prime_UTR | 50.0% | |
| TGTTGAGAGCAAGCAGATGG+TGG | + | chr1_2:9330015-9330034 | Msa0054640:five_prime_UTR | 50.0% | |
| CAGCTACCTTCATTCCCGTT+AGG | - | chr1_2:9330235-9330254 | None:intergenic | 50.0% | |
| ! | GGCTTCAGTGGGCTTTAGTT+TGG | + | chr1_2:9330823-9330842 | Msa0054640:intron | 50.0% |
| GTGCGCAGTTAAGGTGTATC+AGG | - | chr1_2:9331126-9331145 | None:intergenic | 50.0% | |
| ! | GTGGACTGCCTGAATGAACT+CGG | - | chr1_2:9331279-9331298 | None:intergenic | 50.0% |
| GTTCATTCAGGCAGTCCACA+AGG | + | chr1_2:9331280-9331299 | Msa0054640:CDS | 50.0% | |
| ! | ACACCAAACCTCGATTCGAC+TGG | - | chr1_2:9331541-9331560 | None:intergenic | 50.0% |
| ! | GAGGTTGTGAGGAGGTGTAT+TGG | + | chr1_2:9331597-9331616 | Msa0054640:three_prime_UTR | 50.0% |
| TTCACCACACGTGCATACTG+TGG | + | chr1_2:9331937-9331956 | Msa0054640:three_prime_UTR | 50.0% | |
| TCCCACCAGCGTCAATAATC+TGG | - | chr1_2:9332292-9332311 | None:intergenic | 50.0% | |
| GATTATTGACGCTGGTGGGA+AGG | + | chr1_2:9332292-9332311 | Msa0054640:three_prime_UTR | 50.0% | |
| TCATTGCCCTAGCAGTTGCT+TGG | - | chr1_2:9332842-9332861 | None:intergenic | 50.0% | |
| GGTGGGAGCTCAATAGAATC+AGG | + | chr1_2:9333213-9333232 | Msa0054640:intron | 50.0% | |
| TCAGGGACAAGCAAGGGAAA+TGG | + | chr1_2:9333231-9333250 | Msa0054640:intron | 50.0% | |
| GTACAGTAGAGCGGAGCAAA+GGG | - | chr1_2:9333468-9333487 | None:intergenic | 50.0% | |
| AGTACAGTAGAGCGGAGCAA+AGG | - | chr1_2:9333469-9333488 | None:intergenic | 50.0% | |
| ACTCTTCATGGGCAGGTGTT+AGG | - | chr1_2:9334087-9334106 | None:intergenic | 50.0% | |
| TGATACCTCTTCCATCAGCG+AGG | + | chr1_2:9334327-9334346 | Msa0054640:three_prime_UTR | 50.0% | |
| GATACCTCTTCCATCAGCGA+GGG | + | chr1_2:9334328-9334347 | Msa0054640:three_prime_UTR | 50.0% | |
| TCAATGTTGCTGCCGACCAC+TGG | + | chr1_2:9329822-9329841 | Msa0054640:five_prime_UTR | 55.0% | |
| !! | ACAGGCACAGAGGCATCACT+TGG | + | chr1_2:9329887-9329906 | Msa0054640:five_prime_UTR | 55.0% |
| ! | TGAGAGCAAGCAGATGGTGG+TGG | + | chr1_2:9330018-9330037 | Msa0054640:five_prime_UTR | 55.0% |
| GCAAAGCCTTGGGCTTCAGT+GGG | + | chr1_2:9330812-9330831 | Msa0054640:intron | 55.0% | |
| CTAAAGCCCACTGAAGCCCA+AGG | - | chr1_2:9330821-9330840 | None:intergenic | 55.0% | |
| TGAATGAACTCGGCCTCACG+AGG | - | chr1_2:9331269-9331288 | None:intergenic | 55.0% | |
| TCGTGAGGCCGAGTTCATTC+AGG | + | chr1_2:9331268-9331287 | Msa0054640:CDS | 55.0% | |
| CCCACGTGCGGTAAAGAGAA+GGG | - | chr1_2:9331880-9331899 | None:intergenic | 55.0% | |
| CCCTTCTCTTTACCGCACGT+GGG | + | chr1_2:9331877-9331896 | Msa0054640:three_prime_UTR | 55.0% | |
| ACCCACGTGCGGTAAAGAGA+AGG | - | chr1_2:9331881-9331900 | None:intergenic | 55.0% | |
| TTCTCTTTACCGCACGTGGG+TGG | + | chr1_2:9331880-9331899 | Msa0054640:three_prime_UTR | 55.0% | |
| CAGGCACACCCAGATTCAAC+AGG | - | chr1_2:9332400-9332419 | None:intergenic | 55.0% | |
| CTGTTGAATCTGGGTGTGCC+TGG | + | chr1_2:9332398-9332417 | Msa0054640:three_prime_UTR | 55.0% | |
| !! | GGCCTGGATTCTAGAGTCCT+TGG | + | chr1_2:9333321-9333340 | Msa0054640:intron | 55.0% |
| CAGACATTTGCTCCACAGGG+AGG | + | chr1_2:9334145-9334164 | Msa0054640:three_prime_UTR | 55.0% | |
| AGCGACAGTGGAAGTGACAG+TGG | + | chr1_2:9334235-9334254 | Msa0054640:three_prime_UTR | 55.0% | |
| CAATCCCTCGCTGATGGAAG+AGG | - | chr1_2:9334335-9334354 | None:intergenic | 55.0% | |
| CTCTTCCATCAGCGAGGGAT+TGG | + | chr1_2:9334333-9334352 | Msa0054640:three_prime_UTR | 55.0% | |
| TTCCATCAGCGAGGGATTGG+AGG | + | chr1_2:9334336-9334355 | Msa0054640:three_prime_UTR | 55.0% | |
| TCCATCAGCGAGGGATTGGA+GGG | + | chr1_2:9334337-9334356 | Msa0054640:three_prime_UTR | 55.0% | |
| !! | GGGATTGGAGGGTACTGATG+AGG | + | chr1_2:9334348-9334367 | Msa0054640:three_prime_UTR | 55.0% |
| CCATGTAGTGAGTGGCGCGA+TGG | - | chr1_2:9329079-9329098 | None:intergenic | 60.0% | |
| CCATCGCGCCACTCACTACA+TGG | + | chr1_2:9329076-9329095 | Msa0054640:five_prime_UTR | 60.0% | |
| TTGCTGCCGACCACTGGAGT+AGG | + | chr1_2:9329828-9329847 | Msa0054640:five_prime_UTR | 60.0% | |
| TGCTGCCGACCACTGGAGTA+GGG | + | chr1_2:9329829-9329848 | Msa0054640:five_prime_UTR | 60.0% | |
| GGCAAAGCCTTGGGCTTCAG+TGG | + | chr1_2:9330811-9330830 | Msa0054640:intron | 60.0% | |
| GCCCTTCTCTTTACCGCACG+TGG | + | chr1_2:9331876-9331895 | Msa0054640:three_prime_UTR | 60.0% | |
| TCTTTACCGCACGTGGGTGG+AGG | + | chr1_2:9331883-9331902 | Msa0054640:three_prime_UTR | 60.0% | |
| !! | GAGGTTGGTGGCCCCAAAAG+AGG | + | chr1_2:9331902-9331921 | Msa0054640:three_prime_UTR | 60.0% |
| CTGGAGTAAGTGGAAGGGCC+TGG | + | chr1_2:9333305-9333324 | Msa0054640:intron | 60.0% | |
| AGCGGAGCAAAGGGCCACAA+TGG | - | chr1_2:9333459-9333478 | None:intergenic | 60.0% | |
| ACCCTCCAATCCCTCGCTGA+TGG | - | chr1_2:9334341-9334360 | None:intergenic | 60.0% | |
| TACCGCACGTGGGTGGAGGT+TGG | + | chr1_2:9331887-9331906 | Msa0054640:three_prime_UTR | 65.0% | |
| CACCAACCTCCACCCACGTG+CGG | - | chr1_2:9331892-9331911 | None:intergenic | 65.0% | |
| GCAGGCAGCTCCAGTGCTAG+TGG | + | chr1_2:9334190-9334209 | Msa0054640:three_prime_UTR | 65.0% | |
| CGCACGTGGGTGGAGGTTGG+TGG | + | chr1_2:9331890-9331909 | Msa0054640:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 9328983 | 9334709 | 9328983 | ID=Msa0054640;Name=Msa0054640 |
| chr1_2 | mRNA | 9328983 | 9334709 | 9328983 | ID=Msa0054640-mRNA-1;Parent=Msa0054640;Name=Msa0054640-mRNA-1;_AED=0.17;_eAED=0.17;_QI=621|0.5|0.8|1|0.25|0|5|1816|120 |
| chr1_2 | exon | 9328983 | 9329227 | 9328983 | ID=Msa0054640-mRNA-1:exon:3429;Parent=Msa0054640-mRNA-1 |
| chr1_2 | exon | 9329799 | 9330373 | 9329799 | ID=Msa0054640-mRNA-1:exon:3430;Parent=Msa0054640-mRNA-1 |
| chr1_2 | exon | 9330483 | 9330513 | 9330483 | ID=Msa0054640-mRNA-1:exon:3431;Parent=Msa0054640-mRNA-1 |
| chr1_2 | exon | 9331214 | 9332515 | 9331214 | ID=Msa0054640-mRNA-1:exon:3432;Parent=Msa0054640-mRNA-1 |
| chr1_2 | exon | 9334063 | 9334709 | 9334063 | ID=Msa0054640-mRNA-1:exon:3433;Parent=Msa0054640-mRNA-1 |
| chr1_2 | five_prime_UTR | 9328983 | 9329227 | 9328983 | ID=Msa0054640-mRNA-1:five_prime_utr;Parent=Msa0054640-mRNA-1 |
| chr1_2 | five_prime_UTR | 9329799 | 9330174 | 9329799 | ID=Msa0054640-mRNA-1:five_prime_utr;Parent=Msa0054640-mRNA-1 |
| chr1_2 | CDS | 9330175 | 9330373 | 9330175 | ID=Msa0054640-mRNA-1:cds;Parent=Msa0054640-mRNA-1 |
| chr1_2 | CDS | 9330483 | 9330513 | 9330483 | ID=Msa0054640-mRNA-1:cds;Parent=Msa0054640-mRNA-1 |
| chr1_2 | CDS | 9331214 | 9331346 | 9331214 | ID=Msa0054640-mRNA-1:cds;Parent=Msa0054640-mRNA-1 |
| chr1_2 | three_prime_UTR | 9331347 | 9332515 | 9331347 | ID=Msa0054640-mRNA-1:three_prime_utr;Parent=Msa0054640-mRNA-1 |
| chr1_2 | three_prime_UTR | 9334063 | 9334709 | 9334063 | ID=Msa0054640-mRNA-1:three_prime_utr;Parent=Msa0054640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
