AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171690 MtrunA17_Chr3g0127031 95.390 564 26 0 18 581 1 564 0.0 1058
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171690 AT5G53080.1 57.576 528 222 1 56 581 37 564 0.0 598

Find 133 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTCTTTGTGAGGTTAAA+TGG 0.148805 8_1:-1516319 Msa1171690:three_prime_UTR
CACCCTCTTTCATTGGATTC+AGG 0.207485 8_1:-1519749 Msa1171690:intron
ATGTGGTGCATCGTCCTTTA+AGG 0.225818 8_1:+1518404 None:intergenic
GCTGAATTACTCCATACTTC+TGG 0.251548 8_1:-1517342 Msa1171690:CDS
ATCCTTTCTCTTGGATAATC+AGG 0.268976 8_1:+1516615 None:intergenic
GGAGAAAATGATGGAAGAAT+TGG 0.269813 8_1:-1517658 Msa1171690:CDS
TACATTGTGGAGAGGATTTA+TGG 0.277215 8_1:-1518294 Msa1171690:intron
CCAGCATGTAATCACTCTTT+TGG 0.280025 8_1:-1517913 Msa1171690:CDS
TATTCTTGTTACGCCTCATT+TGG 0.281152 8_1:-1517991 Msa1171690:CDS
ACAAAATGCTTCATGCATTA+AGG 0.296012 8_1:+1516412 None:intergenic
CGCATCCGTGAAAAGGCATT+TGG 0.302103 8_1:-1516895 Msa1171690:CDS
CATATGGTTCATCACTAAAT+TGG 0.312283 8_1:-1516464 Msa1171690:exon
GTTCCATCACCCTCTTTCAT+TGG 0.314733 8_1:-1519756 Msa1171690:CDS
GCAAAAGCTCTTGGTTCAAT+TGG 0.329290 8_1:-1517963 Msa1171690:CDS
AACATATACACAAAAGTATA+TGG 0.333209 8_1:-1517679 Msa1171690:CDS
TTTATTCAAACGTGCTCTTA+AGG 0.344816 8_1:-1517430 Msa1171690:CDS
ATTTGCATTAAGAAGGTCTA+TGG 0.350419 8_1:+1519199 None:intergenic
CCACGAAGTGATGCTCGTTT+AGG 0.354513 8_1:-1519417 Msa1171690:CDS
AGATTCAATACTTATGCATA+TGG 0.358609 8_1:-1518379 Msa1171690:CDS
CATATTAGCACTTGGTTACA+TGG 0.361389 8_1:-1519111 Msa1171690:CDS
AGAAGTTGTCGATACCTTAA+AGG 0.364632 8_1:-1518418 Msa1171690:CDS
AAGCTTACCTCCCAGAAGTA+TGG 0.367519 8_1:+1517331 None:intergenic
CGGCTTAATGCTGGCACTAA+AGG 0.370326 8_1:-1519158 Msa1171690:CDS
ATTTCTTTGTGAGGTTAAAT+GGG 0.372744 8_1:-1516318 Msa1171690:three_prime_UTR
AAAATGACTTTCTGCATCAT+TGG 0.373578 8_1:+1517809 None:intergenic
CAGCAACTTTGAGAAAGAAT+TGG 0.381841 8_1:-1519276 Msa1171690:CDS
ATTCTTGTTACGCCTCATTT+GGG 0.384347 8_1:-1517990 Msa1171690:CDS
ATGCATGTCAGGGGAGGCTT+TGG 0.385246 8_1:-1516708 Msa1171690:intron
TGTTGGTTATCTGTTAAATT+CGG 0.389764 8_1:-1519069 Msa1171690:intron
AGGTGCTGAAAGTAAGGATT+TGG 0.391390 8_1:-1517880 Msa1171690:CDS
CTGAATTACTCCATACTTCT+GGG 0.392390 8_1:-1517341 Msa1171690:CDS
GAAGCTAGAAATGGTCCTAA+TGG 0.393809 8_1:+1519488 None:intergenic
GTTGTACCTTTACTTAGTCT+TGG 0.402641 8_1:-1517858 Msa1171690:CDS
AAGAGGATAAAGCGCCGTAT+TGG 0.403357 8_1:+1519853 None:intergenic
TATCATGTGTGTTGCTAAGC+TGG 0.404372 8_1:+1517113 None:intergenic
TCTTAATGCAAATTATGAAA+TGG 0.407203 8_1:-1519189 Msa1171690:CDS
ACTGTCATCTTTACCAAGTC+TGG 0.409745 8_1:+1516664 None:intergenic
AGAGGATAAAGCGCCGTATT+GGG 0.422267 8_1:+1519854 None:intergenic
GTATACTACTTAGATAAGTT+AGG 0.422605 8_1:-1516548 Msa1171690:CDS
CACCTCCAATTGTCTTCGTC+GGG 0.426601 8_1:+1519384 None:intergenic
CATGTCCGAATCCTTTCTCT+TGG 0.428885 8_1:+1516606 None:intergenic
TTTCATAATTTGCATTAAGA+AGG 0.432722 8_1:+1519192 None:intergenic
GTCACCGGAGAACAGTATAA+TGG 0.436670 8_1:-1517385 Msa1171690:CDS
TGTACCTCTCTGTAATCAAT+AGG 0.440395 8_1:+1517151 None:intergenic
AAAGGCTAAGGAGTGTGAAT+TGG 0.440607 8_1:+1516269 None:intergenic
AGAAGGAAGAGAGATATTAG+AGG 0.448038 8_1:-1517178 Msa1171690:CDS
TTAATGTGTGTTGTCAATCA+TGG 0.450454 8_1:-1516382 Msa1171690:three_prime_UTR
AAATAGAGGTGCTGAAAGTA+AGG 0.452020 8_1:-1517886 Msa1171690:CDS
TGACAACACACATTAACATA+TGG 0.454276 8_1:+1516389 None:intergenic
AAGCTAGAAATGGTCCTAAT+GGG 0.455185 8_1:+1519489 None:intergenic
CAGCTCCCGACGAAGACAAT+TGG 0.460475 8_1:-1519389 Msa1171690:CDS
GCACGGATAACCTTCTCTGC+AGG 0.465290 8_1:+1516504 None:intergenic
TTGGGTATGGCAAAAGCTCT+TGG 0.466663 8_1:-1517972 Msa1171690:CDS
CACGGATGCGTAAAACCTCC+AGG 0.470890 8_1:+1516908 None:intergenic
AGGGGAACTGCTGTCTGCCT+TGG 0.474769 8_1:-1516345 Msa1171690:three_prime_UTR
TAGGAAGAAATATAAGCATA+TGG 0.476228 8_1:-1516480 Msa1171690:CDS
TAAAGCGCCGTATTGGGCTG+TGG 0.479236 8_1:+1519860 None:intergenic
AGAGGGTGATGGAACAAAAC+AGG 0.480276 8_1:+1519764 None:intergenic
TGAAATGCAGAAGCTAGAAA+TGG 0.483695 8_1:+1519479 None:intergenic
GTGAAAGAGCGGCTTAATGC+TGG 0.485836 8_1:-1519167 Msa1171690:CDS
TTCGCGAAGTCATTAGAACT+TGG 0.487758 8_1:-1519450 Msa1171690:CDS
ATTATCCAAGAGAAAGGATT+CGG 0.491963 8_1:-1516611 Msa1171690:CDS
TGTTACGCCTCATTTGGGTA+TGG 0.497153 8_1:-1517985 Msa1171690:CDS
AAAGAATTGGAGGAATTGTT+CGG 0.497560 8_1:-1519263 Msa1171690:CDS
GTAGCTGCAAGTTGCAACAT+AGG 0.503628 8_1:+1516973 None:intergenic
GATTCAATACTTATGCATAT+GGG 0.505489 8_1:-1518378 Msa1171690:CDS
GCACTTGGTTACATGGCTGT+TGG 0.509178 8_1:-1519104 Msa1171690:CDS
CTTATATTTCTTCCTAAGCA+CGG 0.513677 8_1:+1516487 None:intergenic
CAACTTTGAGAAAGAATTGG+AGG 0.515276 8_1:-1519273 Msa1171690:CDS
AGAGAAGGTTATCCGTGCTT+AGG 0.516989 8_1:-1516499 Msa1171690:CDS
CCTAAACGAGCATCACTTCG+TGG 0.519247 8_1:+1519417 None:intergenic
GAACAAATTTGAAGACTCAC+TGG 0.521362 8_1:-1518337 Msa1171690:CDS
TCATTAGAACTTGGAGGGAC+GGG 0.521457 8_1:-1519441 Msa1171690:CDS
GGAGATCATTCTCTTCCTGT+TGG 0.521643 8_1:-1516874 Msa1171690:intron
AAAGTATATGGAGAAAATGA+TGG 0.522288 8_1:-1517667 Msa1171690:CDS
GCTCAAGTGAAGTGTGCTCT+AGG 0.526312 8_1:-1517616 Msa1171690:intron
ATCCTGATTATCCAAGAGAA+AGG 0.530040 8_1:-1516617 Msa1171690:CDS
AAAAGCTTCCCCTGCAGAGA+AGG 0.530458 8_1:-1516514 Msa1171690:CDS
ACACCTCCAATTGTCTTCGT+CGG 0.531057 8_1:+1519383 None:intergenic
ATCATGTGTGTTGCTAAGCT+GGG 0.537536 8_1:+1517114 None:intergenic
CTTGGTGATATTTCTTTGTG+AGG 0.540407 8_1:-1516327 Msa1171690:three_prime_UTR
AGCTATACATTATACCCATT+AGG 0.542016 8_1:-1519503 Msa1171690:CDS
CTCACTGGACACATATCAAA+GGG 0.542709 8_1:-1518322 Msa1171690:CDS
GTTGGAGACTTGAAGTATGT+TGG 0.543920 8_1:-1519086 Msa1171690:CDS
GTCATTAGAACTTGGAGGGA+CGG 0.545187 8_1:-1519442 Msa1171690:CDS
CAGTATAATGGAAAAGATGA+GGG 0.546450 8_1:-1517373 Msa1171690:CDS
TAGCTGCAAGTTGCAACATA+GGG 0.546816 8_1:+1516974 None:intergenic
GAACCTGAATCCAATGAAAG+AGG 0.550486 8_1:+1519746 None:intergenic
GTGTCTATTCAAGCCAGACT+TGG 0.550978 8_1:-1516677 Msa1171690:CDS
GCGAAGTCATTAGAACTTGG+AGG 0.553693 8_1:-1519447 Msa1171690:CDS
ACAGTATAATGGAAAAGATG+AGG 0.554987 8_1:-1517374 Msa1171690:CDS
CACGGATAACCTTCTCTGCA+GGG 0.555081 8_1:+1516505 None:intergenic
CTCCCGACGAAGACAATTGG+AGG 0.557801 8_1:-1519386 Msa1171690:intron
ATTCGGACATGAGAGTGAGC+AGG 0.562524 8_1:-1516594 Msa1171690:CDS
TAAGTCCCAAACAAAGGCTA+AGG 0.566314 8_1:+1516257 None:intergenic
AGAAGCAGAGAAACTCGCCC+TGG 0.567980 8_1:-1516926 Msa1171690:CDS
TACAGAGAGGTACAAAGGAA+AGG 0.570695 8_1:-1517142 Msa1171690:CDS
ACATAGGGAAGCTGATGGAC+TGG 0.571586 8_1:+1516989 None:intergenic
ACGTGCTCTTAAGGTCATGA+AGG 0.572087 8_1:-1517421 Msa1171690:CDS
CTTACTTCAAGAGGACAAGA+AGG 0.574909 8_1:-1517195 Msa1171690:intron
CCAAAAGAGTGATTACATGC+TGG 0.579083 8_1:+1517913 None:intergenic
CGAAGTCATTAGAACTTGGA+GGG 0.581229 8_1:-1519446 Msa1171690:CDS
AAATGATGGAAGAATTGGAA+TGG 0.582126 8_1:-1517653 Msa1171690:CDS
TAATAGCCCACAGCCCAATA+CGG 0.582329 8_1:-1519867 Msa1171690:five_prime_UTR
CAAATCATGATAAAGCATAA+CGG 0.586673 8_1:-1517021 Msa1171690:CDS
GTCTTCAAATTTGTTCAATG+CGG 0.589742 8_1:+1518344 None:intergenic
AATCCAATGAAAGAGGGTGA+TGG 0.596105 8_1:+1519753 None:intergenic
GGACTCAAATTACATGTCAC+CGG 0.596445 8_1:-1517400 Msa1171690:CDS
TGCTGGCACTAAAGGCATAG+AGG 0.599485 8_1:-1519150 Msa1171690:CDS
ACTCACTGGACACATATCAA+AGG 0.601175 8_1:-1518323 Msa1171690:CDS
AATGCTTCATGCATTAAGGA+AGG 0.603353 8_1:+1516416 None:intergenic
AACGAAGGAACACATAGAAG+AGG 0.604609 8_1:+1519836 None:intergenic
AAAGCGCCGTATTGGGCTGT+GGG 0.609680 8_1:+1519861 None:intergenic
TTGCAACATAGGGAAGCTGA+TGG 0.612312 8_1:+1516984 None:intergenic
AACCTGAATCCAATGAAAGA+GGG 0.613573 8_1:+1519747 None:intergenic
TCAAAGGGCTGTCTACATTG+TGG 0.614616 8_1:-1518307 Msa1171690:CDS
TCTTGCAATGAGAGAGCATG+TGG 0.623593 8_1:+1519582 None:intergenic
AGATTGCCAAGACTAAGTAA+AGG 0.624430 8_1:+1517852 None:intergenic
TTGATTACAGAGAGGTACAA+AGG 0.629542 8_1:-1517147 Msa1171690:CDS
ATCTCGCAACTTCGTACACA+CGG 0.633480 8_1:-1517089 Msa1171690:CDS
GTTGAGTTGCGAAGTTACAG+AGG 0.638573 8_1:-1519811 Msa1171690:CDS
AGCAGAGAAACTCGCCCTGG+AGG 0.648249 8_1:-1516923 Msa1171690:CDS
ACGGATAACCTTCTCTGCAG+GGG 0.654802 8_1:+1516506 None:intergenic
ATTATGAAATGGTGAAAGAG+CGG 0.664891 8_1:-1519178 Msa1171690:CDS
GGGCTGTCTACATTGTGGAG+AGG 0.670249 8_1:-1518302 Msa1171690:CDS
ACGGATGCGTAAAACCTCCA+GGG 0.672923 8_1:+1516909 None:intergenic
TTCGCAACTCAACAGAACGA+AGG 0.689617 8_1:+1519821 None:intergenic
TGGCACTAAAGGCATAGAGG+AGG 0.696456 8_1:-1519147 Msa1171690:CDS
ATAAGTATTGAATCTAGATG+TGG 0.709685 8_1:+1518387 None:intergenic
ACGGTCAAAGAATTATGCAG+AGG 0.715366 8_1:-1517070 Msa1171690:CDS
CTCACAAAGAAATATCACCA+AGG 0.722380 8_1:+1516328 None:intergenic
AATTACTCCATACTTCTGGG+AGG 0.730279 8_1:-1517338 Msa1171690:intron
AGTGCCTATTGATTACAGAG+AGG 0.754196 8_1:-1517155 Msa1171690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACACAAAAAAAAAAAAAA+AGG + chr8_1:1518633-1518652 None:intergenic 10.0%
!!! TTCAAATTTTAACAACAATT+TGG + chr8_1:1517613-1517632 None:intergenic 15.0%
!!! TTATTTATTGTTTTTCACTA+GGG - chr8_1:1518439-1518458 Msa1171690:intron 15.0%
!!! ATATACAATATATTTTTGCA+GGG - chr8_1:1518673-1518692 Msa1171690:intron 15.0%
!!! GTAGTATACAATTTTTTTAA+GGG + chr8_1:1519587-1519606 None:intergenic 15.0%
!!! AGTAGTATACAATTTTTTTA+AGG + chr8_1:1519588-1519607 None:intergenic 15.0%
!! AGTGAAAAAAATGATTAAGA+TGG - chr8_1:1516909-1516928 Msa1171690:CDS 20.0%
!! GTGAAAAAAATGATTAAGAT+GGG - chr8_1:1516910-1516929 Msa1171690:CDS 20.0%
!!! TTTCATAATTTGCATTAAGA+AGG + chr8_1:1516957-1516976 None:intergenic 20.0%
!! TCTTAATGCAAATTATGAAA+TGG - chr8_1:1516957-1516976 Msa1171690:CDS 20.0%
!!! TTTTTGTACAATGAGAATAA+AGG - chr8_1:1517305-1517324 Msa1171690:intron 20.0%
!! AAGAATTATAATGTGAATAC+CGG + chr8_1:1518115-1518134 None:intergenic 20.0%
!!! CACATTATAATTCTTCTTTT+AGG - chr8_1:1518120-1518139 Msa1171690:intron 20.0%
!!! TATAATTCTTCTTTTAGGTA+AGG - chr8_1:1518125-1518144 Msa1171690:intron 20.0%
!! TTGAAGGAGAAAAAAAAATT+AGG + chr8_1:1518377-1518396 None:intergenic 20.0%
!! ACTAATACACTAAATATTGA+AGG + chr8_1:1518393-1518412 None:intergenic 20.0%
!!! CTTATTTATTGTTTTTCACT+AGG - chr8_1:1518438-1518457 Msa1171690:intron 20.0%
!!! AACATATACACAAAAGTATA+TGG - chr8_1:1518467-1518486 Msa1171690:intron 20.0%
!!! GATATACAATATATTTTTGC+AGG - chr8_1:1518672-1518691 Msa1171690:intron 20.0%
!! TAGAACTATTATAAACTTCA+GGG + chr8_1:1519332-1519351 None:intergenic 20.0%
! ACATATGGAATTTGAAAAGA+AGG + chr8_1:1516425-1516444 None:intergenic 25.0%
! TAAAGCAAGAGTAAAACATA+TGG + chr8_1:1516440-1516459 None:intergenic 25.0%
! TATGAACAACTATAAGAGTT+GGG + chr8_1:1516472-1516491 None:intergenic 25.0%
! TTATGAACAACTATAAGAGT+TGG + chr8_1:1516473-1516492 None:intergenic 25.0%
!! TGTTGGTTATCTGTTAAATT+CGG - chr8_1:1517077-1517096 Msa1171690:CDS 25.0%
! ACTTAAGAATCCAGATTTAT+TGG - chr8_1:1517265-1517284 Msa1171690:intron 25.0%
! ATTCTCATTGTACAAAAATC+TGG + chr8_1:1517303-1517322 None:intergenic 25.0%
! GTTAAGCTTGAATGAATAAA+CGG - chr8_1:1517388-1517407 Msa1171690:CDS 25.0%
! GATTTGACTGCATATATTAT+TGG + chr8_1:1517417-1517436 None:intergenic 25.0%
! AAATGTTGCAATAATGAGTT+TGG + chr8_1:1517583-1517602 None:intergenic 25.0%
!!! ATAAGTATTGAATCTAGATG+TGG + chr8_1:1517762-1517781 None:intergenic 25.0%
! AGATTCAATACTTATGCATA+TGG - chr8_1:1517767-1517786 Msa1171690:intron 25.0%
! GATTCAATACTTATGCATAT+GGG - chr8_1:1517768-1517787 Msa1171690:intron 25.0%
! AACATGAAAAACATTGCTAA+CGG + chr8_1:1517891-1517910 None:intergenic 25.0%
!!! AAATAATAACAAGAGTGCTA+TGG + chr8_1:1517975-1517994 None:intergenic 25.0%
!!! ATTTACCGACATTTTTCAAT+TGG - chr8_1:1517991-1518010 Msa1171690:CDS 25.0%
!!! TTTACCGACATTTTTCAATT+GGG - chr8_1:1517992-1518011 Msa1171690:CDS 25.0%
! AAAGTATATGGAGAAAATGA+TGG - chr8_1:1518479-1518498 Msa1171690:intron 25.0%
! AAAAAAAGGAAAGAAAAACC+CGG + chr8_1:1518619-1518638 None:intergenic 25.0%
!!! TTTTTTGTGTTATCAAGCTT+AGG - chr8_1:1518641-1518660 Msa1171690:intron 25.0%
! CAAATCATGATAAAGCATAA+CGG - chr8_1:1519125-1519144 Msa1171690:CDS 25.0%
!!! CTTCTTCATCATTTTTCAAA+TGG + chr8_1:1519205-1519224 None:intergenic 25.0%
! CTAGAACTATTATAAACTTC+AGG + chr8_1:1519333-1519352 None:intergenic 25.0%
! ATTATTCAGATGATTCTGTT+TGG - chr8_1:1519359-1519378 Msa1171690:intron 25.0%
! ATTGTATATTATGCATGTCA+GGG - chr8_1:1519428-1519447 Msa1171690:CDS 25.0%
! GTATACTACTTAGATAAGTT+AGG - chr8_1:1519598-1519617 Msa1171690:CDS 25.0%
! TAGGAAGAAATATAAGCATA+TGG - chr8_1:1519666-1519685 Msa1171690:intron 25.0%
! TATTTCTTTGTGAGGTTAAA+TGG - chr8_1:1519827-1519846 Msa1171690:CDS 25.0%
! ATTTCTTTGTGAGGTTAAAT+GGG - chr8_1:1519828-1519847 Msa1171690:CDS 25.0%
ATGCTATCTGTTCTTCTATT+AGG - chr8_1:1516526-1516545 Msa1171690:CDS 30.0%
AGCTATACATTATACCCATT+AGG - chr8_1:1516643-1516662 Msa1171690:CDS 30.0%
AAAGAATTGGAGGAATTGTT+CGG - chr8_1:1516883-1516902 Msa1171690:CDS 30.0%
ATTTGCATTAAGAAGGTCTA+TGG + chr8_1:1516950-1516969 None:intergenic 30.0%
ATTATGAAATGGTGAAAGAG+CGG - chr8_1:1516968-1516987 Msa1171690:CDS 30.0%
!! GTTTTAGACATATTAGCACT+TGG - chr8_1:1517027-1517046 Msa1171690:CDS 30.0%
TTCAACTAATTCATACCATG+CGG + chr8_1:1517174-1517193 None:intergenic 30.0%
CTATGATCATCCAATAAATC+TGG + chr8_1:1517278-1517297 None:intergenic 30.0%
CAGATTTATTGGATGATCAT+AGG - chr8_1:1517276-1517295 Msa1171690:intron 30.0%
TTGTACAATGAGAATAAAGG+AGG - chr8_1:1517308-1517327 Msa1171690:intron 30.0%
TTGACTGCATATATTATTGG+TGG + chr8_1:1517414-1517433 None:intergenic 30.0%
GAAAATATGCTTGTAAGACA+AGG + chr8_1:1517449-1517468 None:intergenic 30.0%
! AGTTTTCTTTGTATCTGTCT+TGG - chr8_1:1517544-1517563 Msa1171690:intron 30.0%
! GTCTTCAAATTTGTTCAATG+CGG + chr8_1:1517805-1517824 None:intergenic 30.0%
! TTTTCACTCAATAAGAGAGT+GGG - chr8_1:1517920-1517939 Msa1171690:CDS 30.0%
TACACAGATAATTTCCTCTA+AGG + chr8_1:1518067-1518086 None:intergenic 30.0%
!! TGCTACATTTTTCAGAATTC+CGG - chr8_1:1518093-1518112 Msa1171690:intron 30.0%
!!! ACTCTTTTGGAATCAAATAG+AGG - chr8_1:1518246-1518265 Msa1171690:intron 30.0%
AAAATGACTTTCTGCATCAT+TGG + chr8_1:1518340-1518359 None:intergenic 30.0%
!!! ATGCAGAAAGTCATTTTTCT+AGG - chr8_1:1518343-1518362 Msa1171690:CDS 30.0%
! AAATGATGGAAGAATTGGAA+TGG - chr8_1:1518493-1518512 Msa1171690:intron 30.0%
! CTTTTGTTCTCTCTTCAAAT+GGG - chr8_1:1518578-1518597 Msa1171690:intron 30.0%
! TTTTGTTCTCTCTTCAAATG+GGG - chr8_1:1518579-1518598 Msa1171690:intron 30.0%
AAAAAAGGAAAGAAAAACCC+GGG + chr8_1:1518618-1518637 None:intergenic 30.0%
TTTATTCAAACGTGCTCTTA+AGG - chr8_1:1518716-1518735 Msa1171690:intron 30.0%
! TTTTCCATTATACTGTTCTC+CGG + chr8_1:1518768-1518787 None:intergenic 30.0%
! ACAGTATAATGGAAAAGATG+AGG - chr8_1:1518772-1518791 Msa1171690:intron 30.0%
! CAGTATAATGGAAAAGATGA+GGG - chr8_1:1518773-1518792 Msa1171690:intron 30.0%
! AGCTTTATAAACTTGGTAGT+AGG - chr8_1:1518833-1518852 Msa1171690:intron 30.0%
CAATCAATGTCAGTTTCATA+AGG + chr8_1:1519412-1519431 None:intergenic 30.0%
GATTGTATATTATGCATGTC+AGG - chr8_1:1519427-1519446 Msa1171690:CDS 30.0%
TTGTATATTATGCATGTCAG+GGG - chr8_1:1519429-1519448 Msa1171690:CDS 30.0%
ATTATCCAAGAGAAAGGATT+CGG - chr8_1:1519535-1519554 Msa1171690:CDS 30.0%
CTTATATTTCTTCCTAAGCA+CGG + chr8_1:1519662-1519681 None:intergenic 30.0%
CATATGGTTCATCACTAAAT+TGG - chr8_1:1519682-1519701 Msa1171690:intron 30.0%
ACAAAATGCTTCATGCATTA+AGG + chr8_1:1519737-1519756 None:intergenic 30.0%
TGACAACACACATTAACATA+TGG + chr8_1:1519760-1519779 None:intergenic 30.0%
TTAATGTGTGTTGTCAATCA+TGG - chr8_1:1519764-1519783 Msa1171690:CDS 30.0%
!!! AAATGGGATTGTTTTTGTTC+AGG - chr8_1:1519844-1519863 Msa1171690:exon 30.0%
!! TACAGAGGTTTTGTGTACTA+TGG - chr8_1:1516350-1516369 Msa1171690:three_prime_UTR 35.0%
AACCTGAATCCAATGAAAGA+GGG + chr8_1:1516402-1516421 None:intergenic 35.0%
ATCTGTTCTTCTATTAGGAC+TGG - chr8_1:1516531-1516550 Msa1171690:CDS 35.0%
AAGCTAGAAATGGTCCTAAT+GGG + chr8_1:1516660-1516679 None:intergenic 35.0%
TGAAATGCAGAAGCTAGAAA+TGG + chr8_1:1516670-1516689 None:intergenic 35.0%
! CAGCAACTTTGAGAAAGAAT+TGG - chr8_1:1516870-1516889 Msa1171690:intron 35.0%
! CAACTTTGAGAAAGAATTGG+AGG - chr8_1:1516873-1516892 Msa1171690:intron 35.0%
CATATTAGCACTTGGTTACA+TGG - chr8_1:1517035-1517054 Msa1171690:CDS 35.0%
! CTGAAGAGTATACAAGAGAA+GGG + chr8_1:1517118-1517137 None:intergenic 35.0%
! ACTGAAGAGTATACAAGAGA+AGG + chr8_1:1517119-1517138 None:intergenic 35.0%
GAGAGAAGAACAACAGAAAT+TGG + chr8_1:1517636-1517655 None:intergenic 35.0%
ATCGACAACTTCTTTCAACT+GGG + chr8_1:1517721-1517740 None:intergenic 35.0%
TATCGACAACTTCTTTCAAC+TGG + chr8_1:1517722-1517741 None:intergenic 35.0%
AGAAGTTGTCGATACCTTAA+AGG - chr8_1:1517728-1517747 Msa1171690:intron 35.0%
GAACAAATTTGAAGACTCAC+TGG - chr8_1:1517809-1517828 Msa1171690:CDS 35.0%
TACATTGTGGAGAGGATTTA+TGG - chr8_1:1517852-1517871 Msa1171690:CDS 35.0%
! GTTTTCACTCAATAAGAGAG+TGG - chr8_1:1517919-1517938 Msa1171690:CDS 35.0%
TGTGCCCAATTGAAAAATGT+CGG + chr8_1:1517999-1518018 None:intergenic 35.0%
! CTAAGGTATCTGTCTAGAAA+TGG + chr8_1:1518050-1518069 None:intergenic 35.0%
TTTCTAGACAGATACCTTAG+AGG - chr8_1:1518050-1518069 Msa1171690:intron 35.0%
TATTCTTGTTACGCCTCATT+TGG - chr8_1:1518155-1518174 Msa1171690:intron 35.0%
ATTCTTGTTACGCCTCATTT+GGG - chr8_1:1518156-1518175 Msa1171690:intron 35.0%
!! AAATAGAGGTGCTGAAAGTA+AGG - chr8_1:1518260-1518279 Msa1171690:intron 35.0%
GTTGTACCTTTACTTAGTCT+TGG - chr8_1:1518288-1518307 Msa1171690:intron 35.0%
AGATTGCCAAGACTAAGTAA+AGG + chr8_1:1518297-1518316 None:intergenic 35.0%
! GGAGAAAATGATGGAAGAAT+TGG - chr8_1:1518488-1518507 Msa1171690:intron 35.0%
! GCTTTTGTTCTCTCTTCAAA+TGG - chr8_1:1518577-1518596 Msa1171690:intron 35.0%
AAAAAGGAAAGAAAAACCCG+GGG + chr8_1:1518617-1518636 None:intergenic 35.0%
CTGAATTACTCCATACTTCT+GGG - chr8_1:1518805-1518824 Msa1171690:intron 35.0%
! GGAGGTAAGCTTTATAAACT+TGG - chr8_1:1518826-1518845 Msa1171690:intron 35.0%
ATGTAACTCAACACTTACTG+TGG - chr8_1:1518918-1518937 Msa1171690:intron 35.0%
AGAAGGAAGAGAGATATTAG+AGG - chr8_1:1518968-1518987 Msa1171690:intron 35.0%
TGTACCTCTCTGTAATCAAT+AGG + chr8_1:1518998-1519017 None:intergenic 35.0%
! TTGATTACAGAGAGGTACAA+AGG - chr8_1:1518999-1519018 Msa1171690:intron 35.0%
ATCCTGATTATCCAAGAGAA+AGG - chr8_1:1519529-1519548 Msa1171690:CDS 35.0%
ATCCTTTCTCTTGGATAATC+AGG + chr8_1:1519534-1519553 None:intergenic 35.0%
AATGCTTCATGCATTAAGGA+AGG + chr8_1:1519733-1519752 None:intergenic 35.0%
! TCATGGTTTTTACTTCAGTG+AGG - chr8_1:1519781-1519800 Msa1171690:CDS 35.0%
! CATGGTTTTTACTTCAGTGA+GGG - chr8_1:1519782-1519801 Msa1171690:CDS 35.0%
! ATGGTTTTTACTTCAGTGAG+GGG - chr8_1:1519783-1519802 Msa1171690:CDS 35.0%
CTCACAAAGAAATATCACCA+AGG + chr8_1:1519821-1519840 None:intergenic 35.0%
! CTTGGTGATATTTCTTTGTG+AGG - chr8_1:1519819-1519838 Msa1171690:CDS 35.0%
!!! GGATTGTTTTTGTTCAGGTT+TGG - chr8_1:1519849-1519868 Msa1171690:exon 35.0%
AACGAAGGAACACATAGAAG+AGG + chr8_1:1516313-1516332 None:intergenic 40.0%
AATCCAATGAAAGAGGGTGA+TGG + chr8_1:1516396-1516415 None:intergenic 40.0%
GAACCTGAATCCAATGAAAG+AGG + chr8_1:1516403-1516422 None:intergenic 40.0%
GAACAACTATAAGAGTTGGG+TGG + chr8_1:1516469-1516488 None:intergenic 40.0%
GAAGCTAGAAATGGTCCTAA+TGG + chr8_1:1516661-1516680 None:intergenic 40.0%
TTCGCGAAGTCATTAGAACT+TGG - chr8_1:1516696-1516715 Msa1171690:CDS 40.0%
CGAAGTCATTAGAACTTGGA+GGG - chr8_1:1516700-1516719 Msa1171690:CDS 40.0%
! AGACAATTGGAGGTGTGAAT+TGG - chr8_1:1516770-1516789 Msa1171690:intron 40.0%
GTTGGAGACTTGAAGTATGT+TGG - chr8_1:1517060-1517079 Msa1171690:CDS 40.0%
! AAGAGTATACAAGAGAAGGG+TGG + chr8_1:1517115-1517134 None:intergenic 40.0%
ATAAAGGAGGAGTCAGTTGT+TGG - chr8_1:1517321-1517340 Msa1171690:intron 40.0%
TGCTGATAGAAAGATAGCGT+GGG + chr8_1:1517495-1517514 None:intergenic 40.0%
ATGCTGATAGAAAGATAGCG+TGG + chr8_1:1517496-1517515 None:intergenic 40.0%
CATCACATCTTTGACTCTCT+TGG - chr8_1:1517513-1517532 Msa1171690:intron 40.0%
AATCCACACCAAAGAGAAAG+TGG + chr8_1:1517680-1517699 None:intergenic 40.0%
ACTCACTGGACACATATCAA+AGG - chr8_1:1517823-1517842 Msa1171690:CDS 40.0%
CTCACTGGACACATATCAAA+GGG - chr8_1:1517824-1517843 Msa1171690:CDS 40.0%
TCAATAAGAGAGTGGGTGTT+AGG - chr8_1:1517927-1517946 Msa1171690:CDS 40.0%
CAATAAGAGAGTGGGTGTTA+GGG - chr8_1:1517928-1517947 Msa1171690:CDS 40.0%
GCAAAAGCTCTTGGTTCAAT+TGG - chr8_1:1518183-1518202 Msa1171690:intron 40.0%
CCAAAAGAGTGATTACATGC+TGG + chr8_1:1518236-1518255 None:intergenic 40.0%
! CCAGCATGTAATCACTCTTT+TGG - chr8_1:1518233-1518252 Msa1171690:intron 40.0%
!! AGGTGCTGAAAGTAAGGATT+TGG - chr8_1:1518266-1518285 Msa1171690:intron 40.0%
GGACTCAAATTACATGTCAC+CGG - chr8_1:1518746-1518765 Msa1171690:intron 40.0%
GCTGAATTACTCCATACTTC+TGG - chr8_1:1518804-1518823 Msa1171690:intron 40.0%
AATTACTCCATACTTCTGGG+AGG - chr8_1:1518808-1518827 Msa1171690:intron 40.0%
GGAGCAAAAGATTAAGACCA+AGG - chr8_1:1518854-1518873 Msa1171690:intron 40.0%
TCCTATTGCCTTACTTCAAG+AGG - chr8_1:1518942-1518961 Msa1171690:intron 40.0%
TCCTCTTGAAGTAAGGCAAT+AGG + chr8_1:1518946-1518965 None:intergenic 40.0%
CTTCTTGTCCTCTTGAAGTA+AGG + chr8_1:1518953-1518972 None:intergenic 40.0%
CTTACTTCAAGAGGACAAGA+AGG - chr8_1:1518951-1518970 Msa1171690:intron 40.0%
! AGTGCCTATTGATTACAGAG+AGG - chr8_1:1518991-1519010 Msa1171690:intron 40.0%
! TACAGAGAGGTACAAAGGAA+AGG - chr8_1:1519004-1519023 Msa1171690:intron 40.0%
! ATCATGTGTGTTGCTAAGCT+GGG + chr8_1:1519035-1519054 None:intergenic 40.0%
! TATCATGTGTGTTGCTAAGC+TGG + chr8_1:1519036-1519055 None:intergenic 40.0%
ACGGTCAAAGAATTATGCAG+AGG - chr8_1:1519076-1519095 Msa1171690:CDS 40.0%
TAGCTGCAAGTTGCAACATA+GGG + chr8_1:1519175-1519194 None:intergenic 40.0%
! GATCTCCAAATGCCTTTTCA+CGG + chr8_1:1519259-1519278 None:intergenic 40.0%
! GAGAAGGGAATTTTACCAAC+AGG + chr8_1:1519290-1519309 None:intergenic 40.0%
TATATTATGCATGTCAGGGG+AGG - chr8_1:1519432-1519451 Msa1171690:CDS 40.0%
ACTGTCATCTTTACCAAGTC+TGG + chr8_1:1519485-1519504 None:intergenic 40.0%
! AAAGGCTAAGGAGTGTGAAT+TGG + chr8_1:1519880-1519899 None:intergenic 40.0%
TAATAGCCCACAGCCCAATA+CGG - chr8_1:1516279-1516298 Msa1171690:three_prime_UTR 45.0%
!! AGAGGATAAAGCGCCGTATT+GGG + chr8_1:1516295-1516314 None:intergenic 45.0%
!! AAGAGGATAAAGCGCCGTAT+TGG + chr8_1:1516296-1516315 None:intergenic 45.0%
TTCGCAACTCAACAGAACGA+AGG + chr8_1:1516328-1516347 None:intergenic 45.0%
! GTTGAGTTGCGAAGTTACAG+AGG - chr8_1:1516335-1516354 Msa1171690:three_prime_UTR 45.0%
!! AGAGGGTGATGGAACAAAAC+AGG + chr8_1:1516385-1516404 None:intergenic 45.0%
GTTCCATCACCCTCTTTCAT+TGG - chr8_1:1516390-1516409 Msa1171690:three_prime_UTR 45.0%
CACCCTCTTTCATTGGATTC+AGG - chr8_1:1516397-1516416 Msa1171690:three_prime_UTR 45.0%
! TCTTGCAATGAGAGAGCATG+TGG + chr8_1:1516567-1516586 None:intergenic 45.0%
GCGAAGTCATTAGAACTTGG+AGG - chr8_1:1516699-1516718 Msa1171690:CDS 45.0%
GTCATTAGAACTTGGAGGGA+CGG - chr8_1:1516704-1516723 Msa1171690:intron 45.0%
TCATTAGAACTTGGAGGGAC+GGG - chr8_1:1516705-1516724 Msa1171690:intron 45.0%
ACACCTCCAATTGTCTTCGT+CGG + chr8_1:1516766-1516785 None:intergenic 45.0%
TGCAGAACTTGCAGAGTCAA+TGG + chr8_1:1516839-1516858 None:intergenic 45.0%
TCTCAAAGTTGCTGCATCAG+TGG + chr8_1:1516864-1516883 None:intergenic 45.0%
AGTATACAAGAGAAGGGTGG+AGG + chr8_1:1517112-1517131 None:intergenic 45.0%
! GATTTCTTGTTGTGTCCGCA+TGG - chr8_1:1517156-1517175 Msa1171690:CDS 45.0%
TGATAGAAAGATAGCGTGGG+TGG + chr8_1:1517492-1517511 None:intergenic 45.0%
ATGTGGTGCATCGTCCTTTA+AGG + chr8_1:1517745-1517764 None:intergenic 45.0%
TCAAAGGGCTGTCTACATTG+TGG - chr8_1:1517839-1517858 Msa1171690:CDS 45.0%
TGTTACGCCTCATTTGGGTA+TGG - chr8_1:1518161-1518180 Msa1171690:intron 45.0%
! GCTTTTGCCATACCCAAATG+AGG + chr8_1:1518171-1518190 None:intergenic 45.0%
TTGGGTATGGCAAAAGCTCT+TGG - chr8_1:1518174-1518193 Msa1171690:intron 45.0%
TTCAAATGGGGTCCAAGTAC+AGG - chr8_1:1518591-1518610 Msa1171690:intron 45.0%
ACGTGCTCTTAAGGTCATGA+AGG - chr8_1:1518725-1518744 Msa1171690:intron 45.0%
GTCACCGGAGAACAGTATAA+TGG - chr8_1:1518761-1518780 Msa1171690:intron 45.0%
AAGCTTACCTCCCAGAAGTA+TGG + chr8_1:1518818-1518837 None:intergenic 45.0%
CCTACTGTGTTCTTACTCCT+TGG + chr8_1:1518874-1518893 None:intergenic 45.0%
CCAAGGAGTAAGAACACAGT+AGG - chr8_1:1518871-1518890 Msa1171690:intron 45.0%
ATCTCGCAACTTCGTACACA+CGG - chr8_1:1519057-1519076 Msa1171690:intron 45.0%
TTGCAACATAGGGAAGCTGA+TGG + chr8_1:1519165-1519184 None:intergenic 45.0%
GTAGCTGCAAGTTGCAACAT+AGG + chr8_1:1519176-1519195 None:intergenic 45.0%
! GGTTTTACGCATCCGTGAAA+AGG - chr8_1:1519244-1519263 Msa1171690:CDS 45.0%
GGAGATCATTCTCTTCCTGT+TGG - chr8_1:1519272-1519291 Msa1171690:CDS 45.0%
! CATGTTTTCACGGAGGAGAA+GGG + chr8_1:1519305-1519324 None:intergenic 45.0%
! TCAGGGTGACCATGTTTTCA+CGG + chr8_1:1519315-1519334 None:intergenic 45.0%
GTGTCTATTCAAGCCAGACT+TGG - chr8_1:1519469-1519488 Msa1171690:CDS 45.0%
CATGTCCGAATCCTTTCTCT+TGG + chr8_1:1519543-1519562 None:intergenic 45.0%
AGAGAAGGTTATCCGTGCTT+AGG - chr8_1:1519647-1519666 Msa1171690:intron 45.0%
CCTAAACGAGCATCACTTCG+TGG + chr8_1:1516732-1516751 None:intergenic 50.0%
CCACGAAGTGATGCTCGTTT+AGG - chr8_1:1516729-1516748 Msa1171690:intron 50.0%
CACCTCCAATTGTCTTCGTC+GGG + chr8_1:1516765-1516784 None:intergenic 50.0%
GTGAAAGAGCGGCTTAATGC+TGG - chr8_1:1516979-1516998 Msa1171690:CDS 50.0%
CGGCTTAATGCTGGCACTAA+AGG - chr8_1:1516988-1517007 Msa1171690:CDS 50.0%
! TGCTGGCACTAAAGGCATAG+AGG - chr8_1:1516996-1517015 Msa1171690:CDS 50.0%
! TGGCACTAAAGGCATAGAGG+AGG - chr8_1:1516999-1517018 Msa1171690:CDS 50.0%
GCACTTGGTTACATGGCTGT+TGG - chr8_1:1517042-1517061 Msa1171690:CDS 50.0%
ACCAAAGAGAAAGTGGAGCG+AGG + chr8_1:1517673-1517692 None:intergenic 50.0%
GCTCCACTTTCTCTTTGGTG+TGG - chr8_1:1517674-1517693 Msa1171690:CDS 50.0%
GCTCAAGTGAAGTGTGCTCT+AGG - chr8_1:1518530-1518549 Msa1171690:intron 50.0%
! ACATAGGGAAGCTGATGGAC+TGG + chr8_1:1519160-1519179 None:intergenic 50.0%
ACGGATGCGTAAAACCTCCA+GGG + chr8_1:1519240-1519259 None:intergenic 50.0%
!! CGCATCCGTGAAAAGGCATT+TGG - chr8_1:1519251-1519270 Msa1171690:CDS 50.0%
! CCATGTTTTCACGGAGGAGA+AGG + chr8_1:1519306-1519325 None:intergenic 50.0%
CCTTCTCCTCCGTGAAAACA+TGG - chr8_1:1519303-1519322 Msa1171690:intron 50.0%
ATTCGGACATGAGAGTGAGC+AGG - chr8_1:1519552-1519571 Msa1171690:CDS 50.0%
AAAAGCTTCCCCTGCAGAGA+AGG - chr8_1:1519632-1519651 Msa1171690:intron 50.0%
ACGGATAACCTTCTCTGCAG+GGG + chr8_1:1519643-1519662 None:intergenic 50.0%
CACGGATAACCTTCTCTGCA+GGG + chr8_1:1519644-1519663 None:intergenic 50.0%
!! AAAGCGCCGTATTGGGCTGT+GGG + chr8_1:1516288-1516307 None:intergenic 55.0%
!! TAAAGCGCCGTATTGGGCTG+TGG + chr8_1:1516289-1516308 None:intergenic 55.0%
CAGCTCCCGACGAAGACAAT+TGG - chr8_1:1516757-1516776 Msa1171690:intron 55.0%
CTCCCGACGAAGACAATTGG+AGG - chr8_1:1516760-1516779 Msa1171690:intron 55.0%
GCCTCGCTCCACTTTCTCTT+TGG - chr8_1:1517669-1517688 Msa1171690:CDS 55.0%
GGGCTGTCTACATTGTGGAG+AGG - chr8_1:1517844-1517863 Msa1171690:CDS 55.0%
AAAAACCCGGGGCCTGTACT+TGG + chr8_1:1518606-1518625 None:intergenic 55.0%
AGAAGCAGAGAAACTCGCCC+TGG - chr8_1:1519220-1519239 Msa1171690:CDS 55.0%
CACGGATGCGTAAAACCTCC+AGG + chr8_1:1519241-1519260 None:intergenic 55.0%
! GGGTGACCATGTTTTCACGG+AGG + chr8_1:1519312-1519331 None:intergenic 55.0%
ATGCATGTCAGGGGAGGCTT+TGG - chr8_1:1519438-1519457 Msa1171690:CDS 55.0%
GCACGGATAACCTTCTCTGC+AGG + chr8_1:1519645-1519664 None:intergenic 55.0%
AGCAGAGAAACTCGCCCTGG+AGG - chr8_1:1519223-1519242 Msa1171690:CDS 60.0%
AGGGGAACTGCTGTCTGCCT+TGG - chr8_1:1519801-1519820 Msa1171690:CDS 60.0%
TGGGGTCCAAGTACAGGCCC+CGG - chr8_1:1518597-1518616 Msa1171690:intron 65.0%
GGGGTCCAAGTACAGGCCCC+GGG - chr8_1:1518598-1518617 Msa1171690:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 1516268 1519900 1516268 ID=Msa1171690;Name=Msa1171690
chr8_1 mRNA 1516268 1519900 1516268 ID=Msa1171690-mRNA-1;Parent=Msa1171690;Name=Msa1171690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=50|1|1|1|1|1|9|201|581
chr8_1 exon 1516268 1516719 1516268 ID=Msa1171690-mRNA-1:exon:476;Parent=Msa1171690-mRNA-1
chr8_1 exon 1516875 1517206 1516875 ID=Msa1171690-mRNA-1:exon:475;Parent=Msa1171690-mRNA-1
chr8_1 exon 1517339 1517474 1517339 ID=Msa1171690-mRNA-1:exon:474;Parent=Msa1171690-mRNA-1
chr8_1 exon 1517617 1517708 1517617 ID=Msa1171690-mRNA-1:exon:473;Parent=Msa1171690-mRNA-1
chr8_1 exon 1517804 1518026 1517804 ID=Msa1171690-mRNA-1:exon:472;Parent=Msa1171690-mRNA-1
chr8_1 exon 1518295 1518445 1518295 ID=Msa1171690-mRNA-1:exon:471;Parent=Msa1171690-mRNA-1
chr8_1 exon 1519070 1519295 1519070 ID=Msa1171690-mRNA-1:exon:470;Parent=Msa1171690-mRNA-1
chr8_1 exon 1519387 1519620 1519387 ID=Msa1171690-mRNA-1:exon:469;Parent=Msa1171690-mRNA-1
chr8_1 exon 1519750 1519900 1519750 ID=Msa1171690-mRNA-1:exon:468;Parent=Msa1171690-mRNA-1
chr8_1 five_prime_UTR 1519851 1519900 1519851 ID=Msa1171690-mRNA-1:five_prime_utr;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1519750 1519850 1519750 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1519387 1519620 1519387 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1519070 1519295 1519070 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1518295 1518445 1518295 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1517804 1518026 1517804 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1517617 1517708 1517617 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1517339 1517474 1517339 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1516875 1517206 1516875 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 CDS 1516469 1516719 1516469 ID=Msa1171690-mRNA-1:cds;Parent=Msa1171690-mRNA-1
chr8_1 three_prime_UTR 1516268 1516468 1516268 ID=Msa1171690-mRNA-1:three_prime_utr;Parent=Msa1171690-mRNA-1
Gene Sequence

>Msa1171690

ATGTGTTCCTTCGTTCTGTTGAGTTGCGAAGTTACAGAGGTTTTGTGTACTATGGAAGCTTCATCCTGTTTTGTTCCATCACCCTCTTTCATTGGATTCAGGACTGGCAAAGAGCGTCCACATGCTCTCTCATTGCAAGAATTCAAAAGAATAATAAGCTTTTCAGTTTGTAATCAAAAGCAAAATTACAATCAAAAGCTATACATTATACCCATTAGGACCATTTCTAGCTTCTGCATTTCAAGATCTTTCGCGAAGTCATTAGAACTTGGAGGGACGGGACCACGAAGTGATGCTCGTTTAGGTTATTCAGCTCCCGACGAAGACAATTGGAGCAACTTTGAGAAAGAATTGGAGGAATTGTTCGGTGAAGTGAAAAAAATGATTAAGATGGGAAAGAAAAGTGATGCCATAGACCTTCTTAATGCAAATTATGAAATGGTGAAAGAGCGGCTTAATGCTGGCACTAAAGGCATAGAGGAGGCTGCAGTTTTAGACATATTAGCACTTGGTTACATGGCTGTTGGAGACTTGAAGTATGTTGGTTATCTGTTAAATTCGTTGAAAGAAGTTGTCGATACCTTAAAGGACGATGCACCACATCTAGATTCAATACTTATGCATATGGGAAATATGTATGCCGCATTGAACAAATTTGAAGACTCACTGGACACATATCAAAGGGCTGTCTACATTGTGGAGAGGATTTATGGTAAGGATAGCACTATTCTTGTTACGCCTCATTTGGGTATGGCAAAAGCTCTTGGTTCAATTGGAAAAACAACAAAAGCAATAAAGATATACCAGCATGTAATCACTCTTTTGGAATCAAATAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTAGTCTTGGCAATCTTTTACTGAAAGAAGAAAGAGCCAATGATGCAGAAAGTCATTTTTCTAGGGTTCTAAACATATACACAAAAGTATATGGAGAAAATGATGGAAGAATTGGAATGGCTATGAGCTCTCTAGCTCAAGTGAAGTGTGCTCTAGGGAAGTCAGATGAAGCGATTCATTTATTCAAACGTGCTCTTAAGGTCATGAAGGACTCAAATTACATGTCACCGGAGAACAGTATAATGGAAAAGATGAGGGTAGATCTTGCTGAATTACTCCATACTTCTGGGAGAGGACAAGAAGGAAGAGAGATATTAGAGGAGTGCCTATTGATTACAGAGAGGTACAAAGGAAAGGAGCATCCCAGCTTAGCAACACACATGATAAATCTCGCAACTTCGTACACACGGTCAAAGAATTATGCAGAGGCTGAGCATTTGCTAAGAAGAAGTTTGCAAATCATGATAAAGCATAACGGAACTGATGACCAGTCCATCAGCTTCCCTATGTTGCAACTTGCAGCTACACTATACCATTTGAAAAATGATGAAGAAGCAGAGAAACTCGCCCTGGAGGTTTTACGCATCCGTGAAAAGGCATTTGGAGATCATTCTCTTCCTGTTGGGGAGGCTTTGGACTGCTTAGTGTCTATTCAAGCCAGACTTGGTAAAGATGACAGTGAGTTACTTGAGCTGCTGAGAAGAATCCTGATTATCCAAGAGAAAGGATTCGGACATGAGAGTGAGCAGGTTTTGCTTACCCTTAAAAAAATTGTATACTACTTAGATAAGTTAGGAAGAAAAGATGAAAAGCTTCCCCTGCAGAGAAGGTTATCCGTGCTTAGGAAGAAATATAAGCATATGGTTCATCACTAA

Protein sequence

>Msa1171690

MCSFVLLSCEVTEVLCTMEASSCFVPSPSFIGFRTGKERPHALSLQEFKRIISFSVCNQKQNYNQKLYIIPIRTISSFCISRSFAKSLELGGTGPRSDARLGYSAPDEDNWSNFEKELEELFGEVKKMIKMGKKSDAIDLLNANYEMVKERLNAGTKGIEEAAVLDILALGYMAVGDLKYVGYLLNSLKEVVDTLKDDAPHLDSILMHMGNMYAALNKFEDSLDTYQRAVYIVERIYGKDSTILVTPHLGMAKALGSIGKTTKAIKIYQHVITLLESNRGAESKDLVVPLLSLGNLLLKEERANDAESHFSRVLNIYTKVYGENDGRIGMAMSSLAQVKCALGKSDEAIHLFKRALKVMKDSNYMSPENSIMEKMRVDLAELLHTSGRGQEGREILEECLLITERYKGKEHPSLATHMINLATSYTRSKNYAEAEHLLRRSLQIMIKHNGTDDQSISFPMLQLAATLYHLKNDEEAEKLALEVLRIREKAFGDHSLPVGEALDCLVSIQARLGKDDSELLELLRRILIIQEKGFGHESEQVLLTLKKIVYYLDKLGRKDEKLPLQRRLSVLRKKYKHMVHH*