Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406570 | XP_003610262.1 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406570 | sp|Q24JJ9|NUP43_ARATH | 59.664 | 357 | 125 | 6 | 8 | 350 | 9 | 360 | 1.64e-142 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406570 | G7JFH6 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1403420 | Msa1406570 | 0.802054 | 6.728336e-49 | -8.615850e-47 |
| Msa1404870 | Msa1406570 | 0.820243 | 7.603567e-53 | -8.615850e-47 |
| Msa1225700 | Msa1406570 | 0.802690 | 4.976662e-49 | -8.615850e-47 |
| Msa0449210 | Msa1406570 | 0.818120 | 2.313549e-52 | -8.615850e-47 |
| Msa1079440 | Msa1406570 | 0.824965 | 6.064740e-54 | -8.615850e-47 |
| Msa1148910 | Msa1406570 | 0.800618 | 1.324529e-48 | -8.615850e-47 |
| Msa1215580 | Msa1406570 | 0.823421 | 1.397785e-53 | -8.615850e-47 |
| Msa1222370 | Msa1406570 | 0.956395 | 3.265355e-114 | -8.615850e-47 |
| Msa0532070 | Msa1406570 | 0.814774 | 1.297973e-51 | -8.615850e-47 |
| Msa0876800 | Msa1406570 | 0.823485 | 1.350626e-53 | -8.615850e-47 |
| Msa0881070 | Msa1406570 | 0.996129 | 9.615095e-224 | -8.615850e-47 |
| Msa0979060 | Msa1406570 | 0.812199 | 4.781649e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406570 | MtrunA17_Chr4g0073531 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406570 | AT4G30840.1 | 59.664 | 357 | 125 | 6 | 8 | 350 | 9 | 360 | 1.67e-143 | 410 |
Find 132 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCATTTATTTGCAAATT+TGG | 0.052006 | tig0023210:-87400 | Msa1406570:three_prime_UTR |
| TGGACCTGTTTCTCAGTTTA+AGG | 0.171125 | tig0023210:-89767 | Msa1406570:CDS |
| ATTAGTATGAAAATGGATTT+TGG | 0.204144 | tig0023210:-87486 | Msa1406570:three_prime_UTR |
| TAAAGCCATTAGTATGAAAA+TGG | 0.210501 | tig0023210:-87493 | Msa1406570:three_prime_UTR |
| TTTCTCAGTTTAAGGGTAAT+TGG | 0.233378 | tig0023210:-89759 | Msa1406570:intron |
| CTTTCGAATTCCAATCTTCA+TGG | 0.235878 | tig0023210:-90182 | Msa1406570:CDS |
| GGATGATGGGAAGGTGAATT+TGG | 0.249012 | tig0023210:-89941 | Msa1406570:CDS |
| ATGTTATTGTCTTGTCAATA+TGG | 0.252900 | tig0023210:+87650 | None:intergenic |
| CTAGACTATGCGCGAATTGC+AGG | 0.286349 | tig0023210:-90411 | Msa1406570:five_prime_UTR |
| TTGCATTTATTTGCAAATTT+GGG | 0.308084 | tig0023210:-87399 | Msa1406570:three_prime_UTR |
| GCATAGTCTAGTGAGGAAAA+TGG | 0.313592 | tig0023210:+90423 | None:intergenic |
| CAACAACCGATTATACTTTC+AGG | 0.318334 | tig0023210:-88288 | Msa1406570:CDS |
| GCTACTGGTGGGTATGGATT+TGG | 0.325102 | tig0023210:-89820 | Msa1406570:CDS |
| TCTCAGGCTGCTGGCTCCTT+AGG | 0.338414 | tig0023210:-88342 | Msa1406570:intron |
| AATTCGAAAGAGAGTGGATT+TGG | 0.343817 | tig0023210:+90195 | None:intergenic |
| TGGCTCCTTAGGTACTGTTT+TGG | 0.346745 | tig0023210:-88331 | Msa1406570:CDS |
| TTTCTTATACGTCAGTGAAA+TGG | 0.356506 | tig0023210:-89861 | Msa1406570:CDS |
| GGTATGGATTTGGTCTTCAT+TGG | 0.362645 | tig0023210:-89810 | Msa1406570:CDS |
| TGTTCGGAGGATGGAATTCT+TGG | 0.363425 | tig0023210:-88135 | Msa1406570:CDS |
| TAGATACTCTATGAGACTTA+AGG | 0.374668 | tig0023210:+87277 | None:intergenic |
| GGTTCTGCCAGCAGCTCAAT+AGG | 0.375269 | tig0023210:+87995 | None:intergenic |
| TGTGTTACTGTTGGGGATGA+TGG | 0.376446 | tig0023210:-89955 | Msa1406570:CDS |
| TTCTTATACGTCAGTGAAAT+GGG | 0.381312 | tig0023210:-89860 | Msa1406570:CDS |
| ATCAATATCAAAGCTATTGA+TGG | 0.381344 | tig0023210:+87967 | None:intergenic |
| ATGGATTTGGTCTTCATTGG+TGG | 0.382216 | tig0023210:-89807 | Msa1406570:CDS |
| GGGTTGAGTGTGTTACTGTT+GGG | 0.384462 | tig0023210:-89963 | Msa1406570:CDS |
| GATTTCGATGGAAGAGAGAT+TGG | 0.389652 | tig0023210:+90230 | None:intergenic |
| TGTATCTGAGGTATCTGTTT+CGG | 0.394410 | tig0023210:-90037 | Msa1406570:CDS |
| GCCGTCACTGCCATTGCAAA+AGG | 0.394520 | tig0023210:+90366 | None:intergenic |
| TATCGTAAATTGTTTGATAG+TGG | 0.394791 | tig0023210:-89892 | Msa1406570:CDS |
| GTGGATTTGGTTTGAAAGAG+TGG | 0.395902 | tig0023210:+90208 | None:intergenic |
| GAAGTGTTGCATTGATTTGA+TGG | 0.396062 | tig0023210:-89992 | Msa1406570:CDS |
| GGGGTTGAGTGTGTTACTGT+TGG | 0.397372 | tig0023210:-89964 | Msa1406570:CDS |
| GGACCTGTTTCTCAGTTTAA+GGG | 0.397416 | tig0023210:-89766 | Msa1406570:CDS |
| AATATCTGAAAGTGAGGTTT+GGG | 0.399294 | tig0023210:-88223 | Msa1406570:CDS |
| TTTGTAGCTGATGGAAGAAC+TGG | 0.403878 | tig0023210:-87569 | Msa1406570:three_prime_UTR |
| TGATTGATTTCTGAAGGAAC+TGG | 0.403888 | tig0023210:+90124 | None:intergenic |
| TTACCCTTAAACTGAGAAAC+AGG | 0.414892 | tig0023210:+89763 | None:intergenic |
| TTACAAAAGAACAATACATT+TGG | 0.415390 | tig0023210:+87513 | None:intergenic |
| AGACAAGTATGCTTTCTTGA+TGG | 0.424181 | tig0023210:+89315 | None:intergenic |
| CCTGTTCCTGAAAGTATAAT+CGG | 0.424667 | tig0023210:+88282 | None:intergenic |
| GATGTTCCCTCTCAGGCTGC+TGG | 0.425293 | tig0023210:-88351 | Msa1406570:intron |
| CAATATCTGAAAGTGAGGTT+TGG | 0.428174 | tig0023210:-88224 | Msa1406570:CDS |
| CCGATTATACTTTCAGGAAC+AGG | 0.429224 | tig0023210:-88282 | Msa1406570:CDS |
| TCTCCTGTGGAGTTTGCTAC+TGG | 0.430125 | tig0023210:-89835 | Msa1406570:CDS |
| CGTAAATTGTTTGATAGTGG+TGG | 0.430467 | tig0023210:-89889 | Msa1406570:CDS |
| ATATCATGGCAGGTAAAATC+CGG | 0.434710 | tig0023210:+88157 | None:intergenic |
| AAGGAGAAGTCCATGAAGAT+TGG | 0.440850 | tig0023210:+90172 | None:intergenic |
| TGGATTTGGTCTTCATTGGT+GGG | 0.443183 | tig0023210:-89806 | Msa1406570:CDS |
| ATGAAGATACAATGACAATC+AGG | 0.445627 | tig0023210:+87364 | None:intergenic |
| CGTCGATGTATTTGTATTGT+GGG | 0.450312 | tig0023210:+90322 | None:intergenic |
| TTTACCTGCCATGATATGTT+CGG | 0.454935 | tig0023210:-88151 | Msa1406570:CDS |
| GAGTTTGCTACTGGTGGGTA+TGG | 0.455560 | tig0023210:-89826 | Msa1406570:CDS |
| TGCATTGATTTGATGGATGG+TGG | 0.458625 | tig0023210:-89985 | Msa1406570:CDS |
| AGATACTCTATGAGACTTAA+GGG | 0.469455 | tig0023210:+87278 | None:intergenic |
| ACAGGAGCAGGTGATGGGGC+TGG | 0.475195 | tig0023210:-88264 | Msa1406570:CDS |
| GCATTGATTTGATGGATGGT+GGG | 0.475819 | tig0023210:-89984 | Msa1406570:CDS |
| ACTTTCAGATATTGACTGAA+TGG | 0.476450 | tig0023210:+88233 | None:intergenic |
| ATCAAGAAAGCATACTTGTC+TGG | 0.477902 | tig0023210:-89313 | Msa1406570:intron |
| TTCGGAGAATGAGCTTCACT+TGG | 0.482774 | tig0023210:-90019 | Msa1406570:CDS |
| CATAGTCTAGTGAGGAAAAT+GGG | 0.483109 | tig0023210:+90424 | None:intergenic |
| CATTTATTTGCAAATTTGGG+TGG | 0.484430 | tig0023210:-87396 | Msa1406570:three_prime_UTR |
| AGAGAGATTGGAATCGAAAT+CGG | 0.485461 | tig0023210:+90242 | None:intergenic |
| TCCATCCTCCGAACATATCA+TGG | 0.485871 | tig0023210:+88143 | None:intergenic |
| TTGAGAGATGAGATTGGTGA+AGG | 0.487769 | tig0023210:+90153 | None:intergenic |
| CATTAGCAGCATGTATGAAA+GGG | 0.488645 | tig0023210:-87438 | Msa1406570:three_prime_UTR |
| CCTGTGGAGTTTGCTACTGG+TGG | 0.490836 | tig0023210:-89832 | Msa1406570:CDS |
| CGGTTGAATGCGGATAGAAC+TGG | 0.492534 | tig0023210:+90285 | None:intergenic |
| GGAGAATGAGCTTCACTTGG+AGG | 0.495077 | tig0023210:-90016 | Msa1406570:CDS |
| ATTGTTTGATAGTGGTGGGT+TGG | 0.495671 | tig0023210:-89884 | Msa1406570:CDS |
| GCATTAGCAGCATGTATGAA+AGG | 0.496238 | tig0023210:-87439 | Msa1406570:three_prime_UTR |
| CAGGAACAGGAGCAGGTGAT+GGG | 0.496867 | tig0023210:-88269 | Msa1406570:CDS |
| AATACATCGACGCCGTTCGT+TGG | 0.497405 | tig0023210:-90311 | Msa1406570:CDS |
| GCGTCGATGTATTTGTATTG+TGG | 0.497450 | tig0023210:+90321 | None:intergenic |
| ATCGCCGCTTCAACTTCCTC+CGG | 0.500028 | tig0023210:-90102 | Msa1406570:CDS |
| TGAGGAACCTATTGAGCTGC+TGG | 0.501027 | tig0023210:-88002 | Msa1406570:CDS |
| CATTGATTTGATGGATGGTG+GGG | 0.506353 | tig0023210:-89983 | Msa1406570:CDS |
| TCAGGAACAGGAGCAGGTGA+TGG | 0.509341 | tig0023210:-88270 | Msa1406570:CDS |
| CCGTCACTGCCATTGCAAAA+GGG | 0.511367 | tig0023210:+90367 | None:intergenic |
| GTGTTACTGTTGGGGATGAT+GGG | 0.513691 | tig0023210:-89954 | Msa1406570:CDS |
| AAGGTGAATTTGGTTACTGT+TGG | 0.514962 | tig0023210:-89931 | Msa1406570:CDS |
| GATTGGAATTCGAAAGAGAG+TGG | 0.515493 | tig0023210:+90189 | None:intergenic |
| TACTGTTGGGGATGATGGGA+AGG | 0.517431 | tig0023210:-89950 | Msa1406570:CDS |
| ATACTTTCAGGAACAGGAGC+AGG | 0.522485 | tig0023210:-88276 | Msa1406570:CDS |
| GAACAAGAAGTGAAGTGAAC+CGG | 0.527173 | tig0023210:+90083 | None:intergenic |
| CGGCGATGATTGATTTCTGA+AGG | 0.529444 | tig0023210:+90118 | None:intergenic |
| CGATGCGAGGCTTGTATCTG+AGG | 0.530352 | tig0023210:-90049 | Msa1406570:CDS |
| GAGGATTTGAGAGATGAGAT+TGG | 0.539351 | tig0023210:+90147 | None:intergenic |
| AACTGAGAAACAGGTCCACC+GGG | 0.540426 | tig0023210:+89772 | None:intergenic |
| TCCTCCGAACATATCATGGC+AGG | 0.540812 | tig0023210:+88147 | None:intergenic |
| ATTTATTTGCAAATTTGGGT+GGG | 0.541888 | tig0023210:-87395 | Msa1406570:three_prime_UTR |
| TGTTGCATTGATTTGATGGA+TGG | 0.542643 | tig0023210:-89988 | Msa1406570:CDS |
| GCCATGATATGTTCGGAGGA+TGG | 0.543883 | tig0023210:-88144 | Msa1406570:CDS |
| GGTTGAGTGTGTTACTGTTG+GGG | 0.546749 | tig0023210:-89962 | Msa1406570:CDS |
| GAGAATGAGCTTCACTTGGA+GGG | 0.549667 | tig0023210:-90015 | Msa1406570:CDS |
| ATGTGATATGTAGTTTAGAG+TGG | 0.549807 | tig0023210:-87683 | Msa1406570:CDS |
| GAAATCGGAAGTAGCGAGAA+CGG | 0.550581 | tig0023210:+90257 | None:intergenic |
| CCAAGCCAAAACAGTACCTA+AGG | 0.551483 | tig0023210:+88326 | None:intergenic |
| ATCTGAAAGTGAGGTTTGGG+AGG | 0.562054 | tig0023210:-88220 | Msa1406570:CDS |
| ATTTGTATTGTGGGAATCTG+TGG | 0.564070 | tig0023210:+90331 | None:intergenic |
| CTCAGATACAAGCCTCGCAT+CGG | 0.564804 | tig0023210:+90050 | None:intergenic |
| AGTGAAATGGGCTTCTCCTG+TGG | 0.565210 | tig0023210:-89848 | Msa1406570:CDS |
| TTTGAAAGAGTGGATTTCGA+TGG | 0.570567 | tig0023210:+90218 | None:intergenic |
| GATTGATTTCTGAAGGAACT+GGG | 0.570627 | tig0023210:+90125 | None:intergenic |
| CTGTGGAGTTTGCTACTGGT+GGG | 0.571129 | tig0023210:-89831 | Msa1406570:CDS |
| AGATACAAGCCTCGCATCGG+TGG | 0.575163 | tig0023210:+90053 | None:intergenic |
| AAACTGAGAAACAGGTCCAC+CGG | 0.575931 | tig0023210:+89771 | None:intergenic |
| TATTGATCGACATAATCCAT+TGG | 0.579252 | tig0023210:-87951 | Msa1406570:intron |
| ATTCTTGGCGTGATTGAGCA+AGG | 0.582274 | tig0023210:-88120 | Msa1406570:intron |
| ACCTGCCATGATATGTTCGG+AGG | 0.585049 | tig0023210:-88148 | Msa1406570:CDS |
| AGAATGAGCTTCACTTGGAG+GGG | 0.586057 | tig0023210:-90014 | Msa1406570:CDS |
| GTAAATTGTTTGATAGTGGT+GGG | 0.592376 | tig0023210:-89888 | Msa1406570:CDS |
| TGTGATATGTAGTTTAGAGT+GGG | 0.593378 | tig0023210:-87682 | Msa1406570:CDS |
| TCAGTCAATATCTGAAAGTG+AGG | 0.610452 | tig0023210:-88229 | Msa1406570:CDS |
| TGGTGGGATCAGAGAAAACC+CGG | 0.615892 | tig0023210:-89790 | Msa1406570:CDS |
| TATCATGGCAGGTAAAATCC+GGG | 0.619066 | tig0023210:+88158 | None:intergenic |
| AACGGCGAAGCGGTTGAATG+CGG | 0.627680 | tig0023210:+90275 | None:intergenic |
| TCGCTGATTCCACCGATGCG+AGG | 0.633426 | tig0023210:-90062 | Msa1406570:CDS |
| TGAACCGGAGGAAGTTGAAG+CGG | 0.635756 | tig0023210:+90098 | None:intergenic |
| AGGAACAGGAGCAGGTGATG+GGG | 0.636331 | tig0023210:-88268 | Msa1406570:CDS |
| ATTAGCAGCATGTATGAAAG+GGG | 0.636875 | tig0023210:-87437 | Msa1406570:three_prime_UTR |
| CCACCAGTAGCAAACTCCAC+AGG | 0.639801 | tig0023210:+89832 | None:intergenic |
| TAGAACTGGAAGCCAACGAA+CGG | 0.640983 | tig0023210:+90299 | None:intergenic |
| GTGATCACGTTAAATCAACA+TGG | 0.649909 | tig0023210:+87325 | None:intergenic |
| AATCAAACACTTCATCTACC+CGG | 0.653812 | tig0023210:-88176 | Msa1406570:CDS |
| TCAAAGCTATTGATGGCACA+AGG | 0.659949 | tig0023210:+87974 | None:intergenic |
| CAAGAAGTGAAGTGAACCGG+AGG | 0.667621 | tig0023210:+90086 | None:intergenic |
| TGATTTCTGAAGGAACTGGG+AGG | 0.689311 | tig0023210:+90128 | None:intergenic |
| AATTCGCGCATAGTCTAGTG+AGG | 0.690151 | tig0023210:+90416 | None:intergenic |
| AAGTAGCGAGAACGGCGAAG+CGG | 0.696247 | tig0023210:+90265 | None:intergenic |
| TTAGCAGCATGTATGAAAGG+GGG | 0.710819 | tig0023210:-87436 | Msa1406570:three_prime_UTR |
| TGGGATCAGAGAAAACCCGG+TGG | 0.782591 | tig0023210:-89787 | Msa1406570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATATTAAAACCAATTT+TGG | + | tig0023210:88831-88850 | None:intergenic | 10.0% |
| !! | GTATAAGTAAATCATATAAA+AGG | + | tig0023210:88461-88480 | None:intergenic | 15.0% |
| !!! | TTTTTTAAGCTTAAAAATGT+TGG | - | tig0023210:88558-88577 | Msa1406570:intron | 15.0% |
| !!! | TGGTTTTAATATTATTTTGA+TGG | - | tig0023210:88835-88854 | Msa1406570:intron | 15.0% |
| !!! | AAAAATAACTGTTTTATCAT+AGG | - | tig0023210:89211-89230 | Msa1406570:intron | 15.0% |
| !! | ATAAGAATTTATCAGATTAA+TGG | - | tig0023210:89269-89288 | Msa1406570:intron | 15.0% |
| !!! | TATATTTTAAAAGCTATTGA+TGG | + | tig0023210:89803-89822 | None:intergenic | 15.0% |
| !! | TATTTAATAGATAAACCATT+TGG | + | tig0023210:89837-89856 | None:intergenic | 15.0% |
| !!! | ACATTTATTTTATCTTGTCT+TGG | - | tig0023210:88165-88184 | Msa1406570:CDS | 20.0% |
| !!! | CATTTATTTTATCTTGTCTT+GGG | - | tig0023210:88166-88185 | Msa1406570:CDS | 20.0% |
| !! | AAATCATATAAAAGGAATTG+AGG | + | tig0023210:88453-88472 | None:intergenic | 20.0% |
| !! | AAGTAAACATAAACTGTAAA+AGG | + | tig0023210:89321-89340 | None:intergenic | 20.0% |
| !! | TATACATTATAATCACCAAA+TGG | - | tig0023210:89819-89838 | Msa1406570:CDS | 20.0% |
| !!! | CTAGTAAAAGAATGATTTTA+TGG | - | tig0023210:89857-89876 | Msa1406570:CDS | 20.0% |
| !!! | TTGAAATTGAGAATTTTGAA+AGG | - | tig0023210:90119-90138 | Msa1406570:CDS | 20.0% |
| !!! | TGAAATTGAGAATTTTGAAA+GGG | - | tig0023210:90120-90139 | Msa1406570:CDS | 20.0% |
| !! | TTACAAAAGAACAATACATT+TGG | + | tig0023210:90209-90228 | None:intergenic | 20.0% |
| !!! | AAAATCCATTTTCATACTAA+TGG | + | tig0023210:90234-90253 | None:intergenic | 20.0% |
| !!! | ATTAGTATGAAAATGGATTT+TGG | - | tig0023210:90233-90252 | Msa1406570:CDS | 20.0% |
| !! | ATTGCATTTATTTGCAAATT+TGG | - | tig0023210:90319-90338 | Msa1406570:CDS | 20.0% |
| !! | TTGCATTTATTTGCAAATTT+GGG | - | tig0023210:90320-90339 | Msa1406570:CDS | 20.0% |
| ! | TATCGTAAATTGTTTGATAG+TGG | - | tig0023210:87827-87846 | Msa1406570:intron | 25.0% |
| ! | TAGCTTATGAAAATAACTTC+TGG | - | tig0023210:88124-88143 | Msa1406570:CDS | 25.0% |
| !! | ATTAAGTTGTTTAACCGAAT+AGG | - | tig0023210:88277-88296 | Msa1406570:CDS | 25.0% |
| ! | TCTAATATTTGAACAATCCT+AGG | + | tig0023210:88305-88324 | None:intergenic | 25.0% |
| ! | AGGGATAAAAATTTGAATTC+TGG | - | tig0023210:88356-88375 | Msa1406570:intron | 25.0% |
| ! | GGGATAAAAATTTGAATTCT+GGG | - | tig0023210:88357-88376 | Msa1406570:intron | 25.0% |
| !!! | TATACTTTTTTCAGTGATTG+TGG | - | tig0023210:88476-88495 | Msa1406570:intron | 25.0% |
| ! | TGTGTTCTTAGTATCTTATA+TGG | + | tig0023210:88872-88891 | None:intergenic | 25.0% |
| ! | GAGAACAAAAATATGATTCT+GGG | + | tig0023210:88914-88933 | None:intergenic | 25.0% |
| ! | TGAGAACAAAAATATGATTC+TGG | + | tig0023210:88915-88934 | None:intergenic | 25.0% |
| ! | TTGTTCTCAACTTACATTAT+TGG | - | tig0023210:88926-88945 | Msa1406570:intron | 25.0% |
| ! | TGTTCTCAACTTACATTATT+GGG | - | tig0023210:88927-88946 | Msa1406570:intron | 25.0% |
| ! | TCTTTAAATACACATGGAAT+CGG | - | tig0023210:88999-89018 | Msa1406570:intron | 25.0% |
| ! | GTAGGATAAATAAAGAACAT+TGG | + | tig0023210:89124-89143 | None:intergenic | 25.0% |
| ! | AACAAAAATTAAGACCAGAA+GGG | - | tig0023210:89144-89163 | Msa1406570:intron | 25.0% |
| ! | GAACATCAATAACTAAGAAA+CGG | + | tig0023210:89355-89374 | None:intergenic | 25.0% |
| ! | CAAATATATTCCTGATGAAT+TGG | + | tig0023210:89663-89682 | None:intergenic | 25.0% |
| ! | CAATTCATCAGGAATATATT+TGG | - | tig0023210:89661-89680 | Msa1406570:intron | 25.0% |
| ! | ATCAATATCAAAGCTATTGA+TGG | + | tig0023210:89755-89774 | None:intergenic | 25.0% |
| ! | TATGGAAAACATGTTATCTT+AGG | - | tig0023210:89875-89894 | Msa1406570:CDS | 25.0% |
| ! | AAATGATAGAGAGAAAAAAG+TGG | - | tig0023210:89959-89978 | Msa1406570:CDS | 25.0% |
| ! | ATGTTATTGTCTTGTCAATA+TGG | + | tig0023210:90072-90091 | None:intergenic | 25.0% |
| !!! | GAAATTGAGAATTTTGAAAG+GGG | - | tig0023210:90121-90140 | Msa1406570:CDS | 25.0% |
| ! | TAAAGCCATTAGTATGAAAA+TGG | - | tig0023210:90226-90245 | Msa1406570:CDS | 25.0% |
| ! | ATTTATTTGCAAATTTGGGT+GGG | - | tig0023210:90324-90343 | Msa1406570:CDS | 25.0% |
| !! | GTAAATTGTTTGATAGTGGT+GGG | - | tig0023210:87831-87850 | Msa1406570:intron | 30.0% |
| TTTCTTATACGTCAGTGAAA+TGG | - | tig0023210:87858-87877 | Msa1406570:intron | 30.0% | |
| TTCTTATACGTCAGTGAAAT+GGG | - | tig0023210:87859-87878 | Msa1406570:intron | 30.0% | |
| TTTCTCAGTTTAAGGGTAAT+TGG | - | tig0023210:87960-87979 | Msa1406570:CDS | 30.0% | |
| AGTAAGCTAAAAACAGCTTA+TGG | + | tig0023210:88086-88105 | None:intergenic | 30.0% | |
| ACAACCATTTATGCTATACA+CGG | - | tig0023210:88251-88270 | Msa1406570:CDS | 30.0% | |
| TTAACCGTGTATAGCATAAA+TGG | + | tig0023210:88258-88277 | None:intergenic | 30.0% | |
| TTAGAGTTATACTTAGTGTG+TGG | - | tig0023210:88320-88339 | Msa1406570:CDS | 30.0% | |
| TATAAAAGGAATTGAGGAGT+GGG | + | tig0023210:88447-88466 | None:intergenic | 30.0% | |
| ATATAAAAGGAATTGAGGAG+TGG | + | tig0023210:88448-88467 | None:intergenic | 30.0% | |
| ! | TTTTCAGTGATTGTGGATTT+TGG | - | tig0023210:88483-88502 | Msa1406570:intron | 30.0% |
| TCTGAACTAAAATAAGTCTG+TGG | - | tig0023210:88523-88542 | Msa1406570:intron | 30.0% | |
| ! | ATCTATCCAACTAGTTGTTT+TGG | - | tig0023210:88666-88685 | Msa1406570:intron | 30.0% |
| AACTATCCAAAACAACTAGT+TGG | + | tig0023210:88675-88694 | None:intergenic | 30.0% | |
| TTTCAGTATAGACCAATAAG+GGG | + | tig0023210:88709-88728 | None:intergenic | 30.0% | |
| GTTTCAGTATAGACCAATAA+GGG | + | tig0023210:88710-88729 | None:intergenic | 30.0% | |
| AGTTTCAGTATAGACCAATA+AGG | + | tig0023210:88711-88730 | None:intergenic | 30.0% | |
| GTATCTTATATGGCATCTTT+AGG | + | tig0023210:88862-88881 | None:intergenic | 30.0% | |
| ! | TCTGGGATTACAGTAAAAAT+GGG | + | tig0023210:88897-88916 | None:intergenic | 30.0% |
| !! | TTCTGGGATTACAGTAAAAA+TGG | + | tig0023210:88898-88917 | None:intergenic | 30.0% |
| ATTTAAAGAGTTCCCATAGT+GGG | + | tig0023210:88988-89007 | None:intergenic | 30.0% | |
| TATTTAAAGAGTTCCCATAG+TGG | + | tig0023210:88989-89008 | None:intergenic | 30.0% | |
| !!! | CTGGTCTTAATTTTTGTTGT+AGG | + | tig0023210:89142-89161 | None:intergenic | 30.0% |
| CAACAAAAATTAAGACCAGA+AGG | - | tig0023210:89143-89162 | Msa1406570:intron | 30.0% | |
| ! | ACTTTCAGATATTGACTGAA+TGG | + | tig0023210:89489-89508 | None:intergenic | 30.0% |
| AATATCTGAAAGTGAGGTTT+GGG | - | tig0023210:89496-89515 | Msa1406570:intron | 30.0% | |
| GTTAAAAATGCCAATTCATC+AGG | - | tig0023210:89650-89669 | Msa1406570:intron | 30.0% | |
| TATTGATCGACATAATCCAT+TGG | - | tig0023210:89768-89787 | Msa1406570:CDS | 30.0% | |
| GAACAATAACATCATCAGAA+AGG | + | tig0023210:90008-90027 | None:intergenic | 30.0% | |
| ATGTGATATGTAGTTTAGAG+TGG | - | tig0023210:90036-90055 | Msa1406570:CDS | 30.0% | |
| ! | TGTGATATGTAGTTTAGAGT+GGG | - | tig0023210:90037-90056 | Msa1406570:CDS | 30.0% |
| !! | ATGAAAATGGATTTTGGCAT+TGG | - | tig0023210:90239-90258 | Msa1406570:CDS | 30.0% |
| CATTTATTTGCAAATTTGGG+TGG | - | tig0023210:90323-90342 | Msa1406570:CDS | 30.0% | |
| ATGAAGATACAATGACAATC+AGG | + | tig0023210:90358-90377 | None:intergenic | 30.0% | |
| CATAGTCTAGTGAGGAAAAT+GGG | + | tig0023210:87298-87317 | None:intergenic | 35.0% | |
| ! | AAGCATAAACCCTTTTGCAA+TGG | - | tig0023210:87343-87362 | Msa1406570:three_prime_UTR | 35.0% |
| ATTTGTATTGTGGGAATCTG+TGG | + | tig0023210:87391-87410 | None:intergenic | 35.0% | |
| CGTCGATGTATTTGTATTGT+GGG | + | tig0023210:87400-87419 | None:intergenic | 35.0% | |
| AGAGAGATTGGAATCGAAAT+CGG | + | tig0023210:87480-87499 | None:intergenic | 35.0% | |
| ! | TTTGAAAGAGTGGATTTCGA+TGG | + | tig0023210:87504-87523 | None:intergenic | 35.0% |
| ! | AATTCGAAAGAGAGTGGATT+TGG | + | tig0023210:87527-87546 | None:intergenic | 35.0% |
| CTTTCGAATTCCAATCTTCA+TGG | - | tig0023210:87537-87556 | Msa1406570:three_prime_UTR | 35.0% | |
| ! | GATTGATTTCTGAAGGAACT+GGG | + | tig0023210:87597-87616 | None:intergenic | 35.0% |
| ! | TGATTGATTTCTGAAGGAAC+TGG | + | tig0023210:87598-87617 | None:intergenic | 35.0% |
| ! | TGTATCTGAGGTATCTGTTT+CGG | - | tig0023210:87682-87701 | Msa1406570:CDS | 35.0% |
| !! | GAAGTGTTGCATTGATTTGA+TGG | - | tig0023210:87727-87746 | Msa1406570:intron | 35.0% |
| !! | TGTTGCATTGATTTGATGGA+TGG | - | tig0023210:87731-87750 | Msa1406570:intron | 35.0% |
| AAGGTGAATTTGGTTACTGT+TGG | - | tig0023210:87788-87807 | Msa1406570:intron | 35.0% | |
| !! | CGTAAATTGTTTGATAGTGG+TGG | - | tig0023210:87830-87849 | Msa1406570:intron | 35.0% |
| TTACCCTTAAACTGAGAAAC+AGG | + | tig0023210:87959-87978 | None:intergenic | 35.0% | |
| TACTCTCAAGTCTCAACTAA+AGG | + | tig0023210:88002-88021 | None:intergenic | 35.0% | |
| AAACACTCGTGATATCATGT+AGG | - | tig0023210:88032-88051 | Msa1406570:intron | 35.0% | |
| AGTTATACTTAGTGTGTGGT+TGG | - | tig0023210:88324-88343 | Msa1406570:CDS | 35.0% | |
| AGACAAGTATGCTTTCTTGA+TGG | + | tig0023210:88407-88426 | None:intergenic | 35.0% | |
| ! | ATCAAGAAAGCATACTTGTC+TGG | - | tig0023210:88406-88425 | Msa1406570:intron | 35.0% |
| ATAAAAGGAATTGAGGAGTG+GGG | + | tig0023210:88446-88465 | None:intergenic | 35.0% | |
| TTCAGAAATTCAGACCACAA+TGG | + | tig0023210:88509-88528 | None:intergenic | 35.0% | |
| TTCAACTTTCAACCCCTTAT+TGG | - | tig0023210:88694-88713 | Msa1406570:intron | 35.0% | |
| TGCAATGCTAGAACCAAAAT+TGG | - | tig0023210:88815-88834 | Msa1406570:intron | 35.0% | |
| GGGAACTCTTTAAATACACA+TGG | - | tig0023210:88993-89012 | Msa1406570:intron | 35.0% | |
| TCGCTAGAATTAAGAATACG+AGG | - | tig0023210:89046-89065 | Msa1406570:intron | 35.0% | |
| CGCTAGAATTAAGAATACGA+GGG | - | tig0023210:89047-89066 | Msa1406570:intron | 35.0% | |
| CAACAACCGATTATACTTTC+AGG | - | tig0023210:89431-89450 | Msa1406570:intron | 35.0% | |
| ! | CCTGTTCCTGAAAGTATAAT+CGG | + | tig0023210:89440-89459 | None:intergenic | 35.0% |
| TCAGTCAATATCTGAAAGTG+AGG | - | tig0023210:89490-89509 | Msa1406570:intron | 35.0% | |
| CAATATCTGAAAGTGAGGTT+TGG | - | tig0023210:89495-89514 | Msa1406570:intron | 35.0% | |
| AATCAAACACTTCATCTACC+CGG | - | tig0023210:89543-89562 | Msa1406570:intron | 35.0% | |
| ATATCATGGCAGGTAAAATC+CGG | + | tig0023210:89565-89584 | None:intergenic | 35.0% | |
| TTTACCTGCCATGATATGTT+CGG | - | tig0023210:89568-89587 | Msa1406570:intron | 35.0% | |
| GACATAATCCATTGGTAAGT+GGG | - | tig0023210:89776-89795 | Msa1406570:CDS | 35.0% | |
| ACATAATCCATTGGTAAGTG+GGG | - | tig0023210:89777-89796 | Msa1406570:CDS | 35.0% | |
| TAGCAACGATGTAAAAACAC+CGG | + | tig0023210:89915-89934 | None:intergenic | 35.0% | |
| AAGTGGTAACTAGATGAATG+TGG | - | tig0023210:89976-89995 | Msa1406570:CDS | 35.0% | |
| ATGATGTTATTGTTCCATGC+AGG | - | tig0023210:90013-90032 | Msa1406570:CDS | 35.0% | |
| !! | AAAATGGATTTTGGCATTGG+CGG | - | tig0023210:90242-90261 | Msa1406570:CDS | 35.0% |
| CATTAGCAGCATGTATGAAA+GGG | - | tig0023210:90281-90300 | Msa1406570:CDS | 35.0% | |
| ATTAGCAGCATGTATGAAAG+GGG | - | tig0023210:90282-90301 | Msa1406570:CDS | 35.0% | |
| GTGATCACGTTAAATCAACA+TGG | + | tig0023210:90397-90416 | None:intergenic | 35.0% | |
| GCATAGTCTAGTGAGGAAAA+TGG | + | tig0023210:87299-87318 | None:intergenic | 40.0% | |
| ! | GCGTCGATGTATTTGTATTG+TGG | + | tig0023210:87401-87420 | None:intergenic | 40.0% |
| GATTTCGATGGAAGAGAGAT+TGG | + | tig0023210:87492-87511 | None:intergenic | 40.0% | |
| !! | GTGGATTTGGTTTGAAAGAG+TGG | + | tig0023210:87514-87533 | None:intergenic | 40.0% |
| GATTGGAATTCGAAAGAGAG+TGG | + | tig0023210:87533-87552 | None:intergenic | 40.0% | |
| AAGGAGAAGTCCATGAAGAT+TGG | + | tig0023210:87550-87569 | None:intergenic | 40.0% | |
| TTGAGAGATGAGATTGGTGA+AGG | + | tig0023210:87569-87588 | None:intergenic | 40.0% | |
| GAGGATTTGAGAGATGAGAT+TGG | + | tig0023210:87575-87594 | None:intergenic | 40.0% | |
| GAACAAGAAGTGAAGTGAAC+CGG | + | tig0023210:87639-87658 | None:intergenic | 40.0% | |
| !! | TGCATTGATTTGATGGATGG+TGG | - | tig0023210:87734-87753 | Msa1406570:intron | 40.0% |
| !! | GCATTGATTTGATGGATGGT+GGG | - | tig0023210:87735-87754 | Msa1406570:intron | 40.0% |
| !! | CATTGATTTGATGGATGGTG+GGG | - | tig0023210:87736-87755 | Msa1406570:intron | 40.0% |
| !! | ATTGTTTGATAGTGGTGGGT+TGG | - | tig0023210:87835-87854 | Msa1406570:intron | 40.0% |
| ! | GGTATGGATTTGGTCTTCAT+TGG | - | tig0023210:87909-87928 | Msa1406570:intron | 40.0% |
| ! | ATGGATTTGGTCTTCATTGG+TGG | - | tig0023210:87912-87931 | Msa1406570:intron | 40.0% |
| ! | TGGATTTGGTCTTCATTGGT+GGG | - | tig0023210:87913-87932 | Msa1406570:intron | 40.0% |
| ! | TGGACCTGTTTCTCAGTTTA+AGG | - | tig0023210:87952-87971 | Msa1406570:CDS | 40.0% |
| ! | GGACCTGTTTCTCAGTTTAA+GGG | - | tig0023210:87953-87972 | Msa1406570:CDS | 40.0% |
| CTTACTTCTGTACACTCTCT+AGG | - | tig0023210:88100-88119 | Msa1406570:intron | 40.0% | |
| AACAATCCTAGGCTCCTATT+CGG | + | tig0023210:88294-88313 | None:intergenic | 40.0% | |
| !!! | TGTGTGGTTGGTTTTTTTGC+AGG | - | tig0023210:88336-88355 | Msa1406570:CDS | 40.0% |
| !!! | GTGTGGTTGGTTTTTTTGCA+GGG | - | tig0023210:88337-88356 | Msa1406570:CDS | 40.0% |
| TAAAAGGAATTGAGGAGTGG+GGG | + | tig0023210:88445-88464 | None:intergenic | 40.0% | |
| !! | ATTGTGGATTTTGGCCATTG+TGG | - | tig0023210:88492-88511 | Msa1406570:intron | 40.0% |
| ACAGTTCTTATGCCAAAAGG+TGG | + | tig0023210:88965-88984 | None:intergenic | 40.0% | |
| CATAAGAACTGTCCCACTAT+GGG | - | tig0023210:88973-88992 | Msa1406570:intron | 40.0% | |
| ACGAGCTTCTTTACTTGTCT+TGG | + | tig0023210:89080-89099 | None:intergenic | 40.0% | |
| GATGAAAAACAGTTCCCTTC+TGG | + | tig0023210:89161-89180 | None:intergenic | 40.0% | |
| TAATGGTTTAGAGAGCTGAG+TGG | - | tig0023210:89286-89305 | Msa1406570:intron | 40.0% | |
| AGTTATTGATGTTCCCTCTC+AGG | - | tig0023210:89361-89380 | Msa1406570:CDS | 40.0% | |
| !!! | CTTAGGTACTGTTTTGGCTT+GGG | - | tig0023210:89394-89413 | Msa1406570:intron | 40.0% |
| CCGATTATACTTTCAGGAAC+AGG | - | tig0023210:89437-89456 | Msa1406570:intron | 40.0% | |
| TATCATGGCAGGTAAAATCC+GGG | + | tig0023210:89564-89583 | None:intergenic | 40.0% | |
| ! | TCAAAGCTATTGATGGCACA+AGG | + | tig0023210:89748-89767 | None:intergenic | 40.0% |
| CGACATAATCCATTGGTAAG+TGG | - | tig0023210:89775-89794 | Msa1406570:CDS | 40.0% | |
| TTAGGACGATTCTTCTGTTC+CGG | - | tig0023210:89893-89912 | Msa1406570:CDS | 40.0% | |
| ACTACATATCACATCCTGCA+TGG | + | tig0023210:90030-90049 | None:intergenic | 40.0% | |
| TTTGTAGCTGATGGAAGAAC+TGG | - | tig0023210:90150-90169 | Msa1406570:CDS | 40.0% | |
| GCATTAGCAGCATGTATGAA+AGG | - | tig0023210:90280-90299 | Msa1406570:CDS | 40.0% | |
| TTAGCAGCATGTATGAAAGG+GGG | - | tig0023210:90283-90302 | Msa1406570:CDS | 40.0% | |
| AATTCGCGCATAGTCTAGTG+AGG | + | tig0023210:87306-87325 | None:intergenic | 45.0% | |
| TAGAACTGGAAGCCAACGAA+CGG | + | tig0023210:87423-87442 | None:intergenic | 45.0% | |
| GAAATCGGAAGTAGCGAGAA+CGG | + | tig0023210:87465-87484 | None:intergenic | 45.0% | |
| ! | TGATTTCTGAAGGAACTGGG+AGG | + | tig0023210:87594-87613 | None:intergenic | 45.0% |
| ! | CGGCGATGATTGATTTCTGA+AGG | + | tig0023210:87604-87623 | None:intergenic | 45.0% |
| TTCGGAGAATGAGCTTCACT+TGG | - | tig0023210:87700-87719 | Msa1406570:intron | 45.0% | |
| GAGAATGAGCTTCACTTGGA+GGG | - | tig0023210:87704-87723 | Msa1406570:intron | 45.0% | |
| AGAATGAGCTTCACTTGGAG+GGG | - | tig0023210:87705-87724 | Msa1406570:intron | 45.0% | |
| ! | GGGTTGAGTGTGTTACTGTT+GGG | - | tig0023210:87756-87775 | Msa1406570:intron | 45.0% |
| ! | GGTTGAGTGTGTTACTGTTG+GGG | - | tig0023210:87757-87776 | Msa1406570:intron | 45.0% |
| ! | TGTGTTACTGTTGGGGATGA+TGG | - | tig0023210:87764-87783 | Msa1406570:intron | 45.0% |
| ! | GTGTTACTGTTGGGGATGAT+GGG | - | tig0023210:87765-87784 | Msa1406570:intron | 45.0% |
| !! | GGATGATGGGAAGGTGAATT+TGG | - | tig0023210:87778-87797 | Msa1406570:intron | 45.0% |
| AAACTGAGAAACAGGTCCAC+CGG | + | tig0023210:87951-87970 | None:intergenic | 45.0% | |
| GTTTAACCGAATAGGAGCCT+AGG | - | tig0023210:88285-88304 | Msa1406570:CDS | 45.0% | |
| AATCACACATGCAGACACAG+TGG | + | tig0023210:88737-88756 | None:intergenic | 45.0% | |
| ACTGTGTCTGCATGTGTGAT+TGG | - | tig0023210:88736-88755 | Msa1406570:intron | 45.0% | |
| ! | TCCCACAATTCACCACCTTT+TGG | - | tig0023210:88950-88969 | Msa1406570:intron | 45.0% |
| GCCAAAAGGTGGTGAATTGT+GGG | + | tig0023210:88954-88973 | None:intergenic | 45.0% | |
| TGCCAAAAGGTGGTGAATTG+TGG | + | tig0023210:88955-88974 | None:intergenic | 45.0% | |
| GGGACAGTTCTTATGCCAAA+AGG | + | tig0023210:88968-88987 | None:intergenic | 45.0% | |
| GCATAAGAACTGTCCCACTA+TGG | - | tig0023210:88972-88991 | Msa1406570:intron | 45.0% | |
| TGGAATCGGCAAATCCCTTA+AGG | - | tig0023210:89013-89032 | Msa1406570:intron | 45.0% | |
| GGAATCGGCAAATCCCTTAA+GGG | - | tig0023210:89014-89033 | Msa1406570:intron | 45.0% | |
| !! | TGGCTCCTTAGGTACTGTTT+TGG | - | tig0023210:89388-89407 | Msa1406570:intron | 45.0% |
| CCAAGCCAAAACAGTACCTA+AGG | + | tig0023210:89396-89415 | None:intergenic | 45.0% | |
| !!! | CCTTAGGTACTGTTTTGGCT+TGG | - | tig0023210:89393-89412 | Msa1406570:intron | 45.0% |
| !!! | CTGTTTTGGCTTGGGATCTT+AGG | - | tig0023210:89402-89421 | Msa1406570:intron | 45.0% |
| ATACTTTCAGGAACAGGAGC+AGG | - | tig0023210:89443-89462 | Msa1406570:intron | 45.0% | |
| ATCTGAAAGTGAGGTTTGGG+AGG | - | tig0023210:89499-89518 | Msa1406570:intron | 45.0% | |
| TCCATCCTCCGAACATATCA+TGG | + | tig0023210:89579-89598 | None:intergenic | 45.0% | |
| TGTTCGGAGGATGGAATTCT+TGG | - | tig0023210:89584-89603 | Msa1406570:intron | 45.0% | |
| ATTCTTGGCGTGATTGAGCA+AGG | - | tig0023210:89599-89618 | Msa1406570:intron | 45.0% | |
| GTTGTGTTCTTACATCGCCT+AGG | - | tig0023210:89694-89713 | Msa1406570:intron | 45.0% | |
| ! | GGGTAGCATTTTGTAGCTGA+TGG | - | tig0023210:90141-90160 | Msa1406570:CDS | 45.0% |
| CTAGACTATGCGCGAATTGC+AGG | - | tig0023210:87308-87327 | Msa1406570:three_prime_UTR | 50.0% | |
| CCGTCACTGCCATTGCAAAA+GGG | + | tig0023210:87355-87374 | None:intergenic | 50.0% | |
| ! | CCCTTTTGCAATGGCAGTGA+CGG | - | tig0023210:87352-87371 | Msa1406570:three_prime_UTR | 50.0% |
| AATACATCGACGCCGTTCGT+TGG | - | tig0023210:87408-87427 | Msa1406570:three_prime_UTR | 50.0% | |
| CGGTTGAATGCGGATAGAAC+TGG | + | tig0023210:87437-87456 | None:intergenic | 50.0% | |
| TGAACCGGAGGAAGTTGAAG+CGG | + | tig0023210:87624-87643 | None:intergenic | 50.0% | |
| CAAGAAGTGAAGTGAACCGG+AGG | + | tig0023210:87636-87655 | None:intergenic | 50.0% | |
| CTCAGATACAAGCCTCGCAT+CGG | + | tig0023210:87672-87691 | None:intergenic | 50.0% | |
| GGAGAATGAGCTTCACTTGG+AGG | - | tig0023210:87703-87722 | Msa1406570:intron | 50.0% | |
| ! | GGGGTTGAGTGTGTTACTGT+TGG | - | tig0023210:87755-87774 | Msa1406570:intron | 50.0% |
| !! | TACTGTTGGGGATGATGGGA+AGG | - | tig0023210:87769-87788 | Msa1406570:intron | 50.0% |
| ! | AGTGAAATGGGCTTCTCCTG+TGG | - | tig0023210:87871-87890 | Msa1406570:intron | 50.0% |
| !! | TCTCCTGTGGAGTTTGCTAC+TGG | - | tig0023210:87884-87903 | Msa1406570:intron | 50.0% |
| !! | CTGTGGAGTTTGCTACTGGT+GGG | - | tig0023210:87888-87907 | Msa1406570:intron | 50.0% |
| !! | GAGTTTGCTACTGGTGGGTA+TGG | - | tig0023210:87893-87912 | Msa1406570:intron | 50.0% |
| ! | GCTACTGGTGGGTATGGATT+TGG | - | tig0023210:87899-87918 | Msa1406570:intron | 50.0% |
| TGGTGGGATCAGAGAAAACC+CGG | - | tig0023210:87929-87948 | Msa1406570:intron | 50.0% | |
| AACTGAGAAACAGGTCCACC+GGG | + | tig0023210:87950-87969 | None:intergenic | 50.0% | |
| ACCTGCCATGATATGTTCGG+AGG | - | tig0023210:89571-89590 | Msa1406570:intron | 50.0% | |
| TCCTCCGAACATATCATGGC+AGG | + | tig0023210:89575-89594 | None:intergenic | 50.0% | |
| GCCATGATATGTTCGGAGGA+TGG | - | tig0023210:89575-89594 | Msa1406570:intron | 50.0% | |
| GTTCTTACATCGCCTAGGTG+AGG | - | tig0023210:89699-89718 | Msa1406570:intron | 50.0% | |
| GCTCAATAGGTTCCTCACCT+AGG | + | tig0023210:89714-89733 | None:intergenic | 50.0% | |
| TGAGGAACCTATTGAGCTGC+TGG | - | tig0023210:89717-89736 | Msa1406570:intron | 50.0% | |
| ! | TTGATGGCCCCACTTACCAA+TGG | + | tig0023210:89787-89806 | None:intergenic | 50.0% |
| GCCGTCACTGCCATTGCAAA+AGG | + | tig0023210:87356-87375 | None:intergenic | 55.0% | |
| AACGGCGAAGCGGTTGAATG+CGG | + | tig0023210:87447-87466 | None:intergenic | 55.0% | |
| AAGTAGCGAGAACGGCGAAG+CGG | + | tig0023210:87457-87476 | None:intergenic | 55.0% | |
| ATCGCCGCTTCAACTTCCTC+CGG | - | tig0023210:87617-87636 | Msa1406570:three_prime_UTR | 55.0% | |
| AGATACAAGCCTCGCATCGG+TGG | + | tig0023210:87669-87688 | None:intergenic | 55.0% | |
| CGATGCGAGGCTTGTATCTG+AGG | - | tig0023210:87670-87689 | Msa1406570:CDS | 55.0% | |
| CCACCAGTAGCAAACTCCAC+AGG | + | tig0023210:87890-87909 | None:intergenic | 55.0% | |
| !! | CCTGTGGAGTTTGCTACTGG+TGG | - | tig0023210:87887-87906 | Msa1406570:intron | 55.0% |
| TGGGATCAGAGAAAACCCGG+TGG | - | tig0023210:87932-87951 | Msa1406570:intron | 55.0% | |
| GCGAGCTGTTGCACCCTTAA+GGG | + | tig0023210:89030-89049 | None:intergenic | 55.0% | |
| AGCGAGCTGTTGCACCCTTA+AGG | + | tig0023210:89031-89050 | None:intergenic | 55.0% | |
| TAGAGAGCTGAGTGGCTGCA+TGG | - | tig0023210:89294-89313 | Msa1406570:intron | 55.0% | |
| TCAGGAACAGGAGCAGGTGA+TGG | - | tig0023210:89449-89468 | Msa1406570:intron | 55.0% | |
| CAGGAACAGGAGCAGGTGAT+GGG | - | tig0023210:89450-89469 | Msa1406570:intron | 55.0% | |
| AGGAACAGGAGCAGGTGATG+GGG | - | tig0023210:89451-89470 | Msa1406570:intron | 55.0% | |
| GGTTCTGCCAGCAGCTCAAT+AGG | + | tig0023210:89727-89746 | None:intergenic | 55.0% | |
| !! | TCGCTGATTCCACCGATGCG+AGG | - | tig0023210:87657-87676 | Msa1406570:CDS | 60.0% |
| GATGTTCCCTCTCAGGCTGC+TGG | - | tig0023210:89368-89387 | Msa1406570:intron | 60.0% | |
| AAGGAGCCAGCAGCCTGAGA+GGG | + | tig0023210:89377-89396 | None:intergenic | 60.0% | |
| TAAGGAGCCAGCAGCCTGAG+AGG | + | tig0023210:89378-89397 | None:intergenic | 60.0% | |
| !! | TCTCAGGCTGCTGGCTCCTT+AGG | - | tig0023210:89377-89396 | Msa1406570:intron | 60.0% |
| !! | ACAGGAGCAGGTGATGGGGC+TGG | - | tig0023210:89455-89474 | Msa1406570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023210 | gene | 87290 | 90451 | 87290 | ID=Msa1406570;Name=Msa1406570 |
| tig0023210 | mRNA | 87290 | 90451 | 87290 | ID=Msa1406570-mRNA-1;Parent=Msa1406570;Name=Msa1406570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=72|1|1|1|1|1|5|363|351 |
| tig0023210 | exon | 87290 | 87706 | 87290 | ID=Msa1406570-mRNA-1:exon:24618;Parent=Msa1406570-mRNA-1 |
| tig0023210 | exon | 87952 | 88025 | 87952 | ID=Msa1406570-mRNA-1:exon:24617;Parent=Msa1406570-mRNA-1 |
| tig0023210 | exon | 88121 | 88358 | 88121 | ID=Msa1406570-mRNA-1:exon:24616;Parent=Msa1406570-mRNA-1 |
| tig0023210 | exon | 89314 | 89383 | 89314 | ID=Msa1406570-mRNA-1:exon:24615;Parent=Msa1406570-mRNA-1 |
| tig0023210 | exon | 89760 | 90451 | 89760 | ID=Msa1406570-mRNA-1:exon:24614;Parent=Msa1406570-mRNA-1 |
| tig0023210 | five_prime_UTR | 90380 | 90451 | 90380 | ID=Msa1406570-mRNA-1:five_prime_utr;Parent=Msa1406570-mRNA-1 |
| tig0023210 | CDS | 89760 | 90379 | 89760 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
| tig0023210 | CDS | 89314 | 89383 | 89314 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
| tig0023210 | CDS | 88121 | 88358 | 88121 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
| tig0023210 | CDS | 87952 | 88025 | 87952 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
| tig0023210 | CDS | 87653 | 87706 | 87653 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
| tig0023210 | three_prime_UTR | 87290 | 87652 | 87290 | ID=Msa1406570-mRNA-1:three_prime_utr;Parent=Msa1406570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
