Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1406570 | XP_003610262.1 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1406570 | sp|Q24JJ9|NUP43_ARATH | 59.664 | 357 | 125 | 6 | 8 | 350 | 9 | 360 | 1.64e-142 | 410 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1406570 | G7JFH6 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1403420 | Msa1406570 | 0.802054 | 6.728336e-49 | -8.615850e-47 |
Msa1404870 | Msa1406570 | 0.820243 | 7.603567e-53 | -8.615850e-47 |
Msa1225700 | Msa1406570 | 0.802690 | 4.976662e-49 | -8.615850e-47 |
Msa0449210 | Msa1406570 | 0.818120 | 2.313549e-52 | -8.615850e-47 |
Msa1079440 | Msa1406570 | 0.824965 | 6.064740e-54 | -8.615850e-47 |
Msa1148910 | Msa1406570 | 0.800618 | 1.324529e-48 | -8.615850e-47 |
Msa1215580 | Msa1406570 | 0.823421 | 1.397785e-53 | -8.615850e-47 |
Msa1222370 | Msa1406570 | 0.956395 | 3.265355e-114 | -8.615850e-47 |
Msa0532070 | Msa1406570 | 0.814774 | 1.297973e-51 | -8.615850e-47 |
Msa0876800 | Msa1406570 | 0.823485 | 1.350626e-53 | -8.615850e-47 |
Msa0881070 | Msa1406570 | 0.996129 | 9.615095e-224 | -8.615850e-47 |
Msa0979060 | Msa1406570 | 0.812199 | 4.781649e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1406570 | MtrunA17_Chr4g0073531 | 98.006 | 351 | 7 | 0 | 1 | 351 | 1 | 351 | 0.0 | 714 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1406570 | AT4G30840.1 | 59.664 | 357 | 125 | 6 | 8 | 350 | 9 | 360 | 1.67e-143 | 410 |
Find 132 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGCATTTATTTGCAAATT+TGG | 0.052006 | tig0023210:-87400 | Msa1406570:three_prime_UTR |
TGGACCTGTTTCTCAGTTTA+AGG | 0.171125 | tig0023210:-89767 | Msa1406570:CDS |
ATTAGTATGAAAATGGATTT+TGG | 0.204144 | tig0023210:-87486 | Msa1406570:three_prime_UTR |
TAAAGCCATTAGTATGAAAA+TGG | 0.210501 | tig0023210:-87493 | Msa1406570:three_prime_UTR |
TTTCTCAGTTTAAGGGTAAT+TGG | 0.233378 | tig0023210:-89759 | Msa1406570:intron |
CTTTCGAATTCCAATCTTCA+TGG | 0.235878 | tig0023210:-90182 | Msa1406570:CDS |
GGATGATGGGAAGGTGAATT+TGG | 0.249012 | tig0023210:-89941 | Msa1406570:CDS |
ATGTTATTGTCTTGTCAATA+TGG | 0.252900 | tig0023210:+87650 | None:intergenic |
CTAGACTATGCGCGAATTGC+AGG | 0.286349 | tig0023210:-90411 | Msa1406570:five_prime_UTR |
TTGCATTTATTTGCAAATTT+GGG | 0.308084 | tig0023210:-87399 | Msa1406570:three_prime_UTR |
GCATAGTCTAGTGAGGAAAA+TGG | 0.313592 | tig0023210:+90423 | None:intergenic |
CAACAACCGATTATACTTTC+AGG | 0.318334 | tig0023210:-88288 | Msa1406570:CDS |
GCTACTGGTGGGTATGGATT+TGG | 0.325102 | tig0023210:-89820 | Msa1406570:CDS |
TCTCAGGCTGCTGGCTCCTT+AGG | 0.338414 | tig0023210:-88342 | Msa1406570:intron |
AATTCGAAAGAGAGTGGATT+TGG | 0.343817 | tig0023210:+90195 | None:intergenic |
TGGCTCCTTAGGTACTGTTT+TGG | 0.346745 | tig0023210:-88331 | Msa1406570:CDS |
TTTCTTATACGTCAGTGAAA+TGG | 0.356506 | tig0023210:-89861 | Msa1406570:CDS |
GGTATGGATTTGGTCTTCAT+TGG | 0.362645 | tig0023210:-89810 | Msa1406570:CDS |
TGTTCGGAGGATGGAATTCT+TGG | 0.363425 | tig0023210:-88135 | Msa1406570:CDS |
TAGATACTCTATGAGACTTA+AGG | 0.374668 | tig0023210:+87277 | None:intergenic |
GGTTCTGCCAGCAGCTCAAT+AGG | 0.375269 | tig0023210:+87995 | None:intergenic |
TGTGTTACTGTTGGGGATGA+TGG | 0.376446 | tig0023210:-89955 | Msa1406570:CDS |
TTCTTATACGTCAGTGAAAT+GGG | 0.381312 | tig0023210:-89860 | Msa1406570:CDS |
ATCAATATCAAAGCTATTGA+TGG | 0.381344 | tig0023210:+87967 | None:intergenic |
ATGGATTTGGTCTTCATTGG+TGG | 0.382216 | tig0023210:-89807 | Msa1406570:CDS |
GGGTTGAGTGTGTTACTGTT+GGG | 0.384462 | tig0023210:-89963 | Msa1406570:CDS |
GATTTCGATGGAAGAGAGAT+TGG | 0.389652 | tig0023210:+90230 | None:intergenic |
TGTATCTGAGGTATCTGTTT+CGG | 0.394410 | tig0023210:-90037 | Msa1406570:CDS |
GCCGTCACTGCCATTGCAAA+AGG | 0.394520 | tig0023210:+90366 | None:intergenic |
TATCGTAAATTGTTTGATAG+TGG | 0.394791 | tig0023210:-89892 | Msa1406570:CDS |
GTGGATTTGGTTTGAAAGAG+TGG | 0.395902 | tig0023210:+90208 | None:intergenic |
GAAGTGTTGCATTGATTTGA+TGG | 0.396062 | tig0023210:-89992 | Msa1406570:CDS |
GGGGTTGAGTGTGTTACTGT+TGG | 0.397372 | tig0023210:-89964 | Msa1406570:CDS |
GGACCTGTTTCTCAGTTTAA+GGG | 0.397416 | tig0023210:-89766 | Msa1406570:CDS |
AATATCTGAAAGTGAGGTTT+GGG | 0.399294 | tig0023210:-88223 | Msa1406570:CDS |
TTTGTAGCTGATGGAAGAAC+TGG | 0.403878 | tig0023210:-87569 | Msa1406570:three_prime_UTR |
TGATTGATTTCTGAAGGAAC+TGG | 0.403888 | tig0023210:+90124 | None:intergenic |
TTACCCTTAAACTGAGAAAC+AGG | 0.414892 | tig0023210:+89763 | None:intergenic |
TTACAAAAGAACAATACATT+TGG | 0.415390 | tig0023210:+87513 | None:intergenic |
AGACAAGTATGCTTTCTTGA+TGG | 0.424181 | tig0023210:+89315 | None:intergenic |
CCTGTTCCTGAAAGTATAAT+CGG | 0.424667 | tig0023210:+88282 | None:intergenic |
GATGTTCCCTCTCAGGCTGC+TGG | 0.425293 | tig0023210:-88351 | Msa1406570:intron |
CAATATCTGAAAGTGAGGTT+TGG | 0.428174 | tig0023210:-88224 | Msa1406570:CDS |
CCGATTATACTTTCAGGAAC+AGG | 0.429224 | tig0023210:-88282 | Msa1406570:CDS |
TCTCCTGTGGAGTTTGCTAC+TGG | 0.430125 | tig0023210:-89835 | Msa1406570:CDS |
CGTAAATTGTTTGATAGTGG+TGG | 0.430467 | tig0023210:-89889 | Msa1406570:CDS |
ATATCATGGCAGGTAAAATC+CGG | 0.434710 | tig0023210:+88157 | None:intergenic |
AAGGAGAAGTCCATGAAGAT+TGG | 0.440850 | tig0023210:+90172 | None:intergenic |
TGGATTTGGTCTTCATTGGT+GGG | 0.443183 | tig0023210:-89806 | Msa1406570:CDS |
ATGAAGATACAATGACAATC+AGG | 0.445627 | tig0023210:+87364 | None:intergenic |
CGTCGATGTATTTGTATTGT+GGG | 0.450312 | tig0023210:+90322 | None:intergenic |
TTTACCTGCCATGATATGTT+CGG | 0.454935 | tig0023210:-88151 | Msa1406570:CDS |
GAGTTTGCTACTGGTGGGTA+TGG | 0.455560 | tig0023210:-89826 | Msa1406570:CDS |
TGCATTGATTTGATGGATGG+TGG | 0.458625 | tig0023210:-89985 | Msa1406570:CDS |
AGATACTCTATGAGACTTAA+GGG | 0.469455 | tig0023210:+87278 | None:intergenic |
ACAGGAGCAGGTGATGGGGC+TGG | 0.475195 | tig0023210:-88264 | Msa1406570:CDS |
GCATTGATTTGATGGATGGT+GGG | 0.475819 | tig0023210:-89984 | Msa1406570:CDS |
ACTTTCAGATATTGACTGAA+TGG | 0.476450 | tig0023210:+88233 | None:intergenic |
ATCAAGAAAGCATACTTGTC+TGG | 0.477902 | tig0023210:-89313 | Msa1406570:intron |
TTCGGAGAATGAGCTTCACT+TGG | 0.482774 | tig0023210:-90019 | Msa1406570:CDS |
CATAGTCTAGTGAGGAAAAT+GGG | 0.483109 | tig0023210:+90424 | None:intergenic |
CATTTATTTGCAAATTTGGG+TGG | 0.484430 | tig0023210:-87396 | Msa1406570:three_prime_UTR |
AGAGAGATTGGAATCGAAAT+CGG | 0.485461 | tig0023210:+90242 | None:intergenic |
TCCATCCTCCGAACATATCA+TGG | 0.485871 | tig0023210:+88143 | None:intergenic |
TTGAGAGATGAGATTGGTGA+AGG | 0.487769 | tig0023210:+90153 | None:intergenic |
CATTAGCAGCATGTATGAAA+GGG | 0.488645 | tig0023210:-87438 | Msa1406570:three_prime_UTR |
CCTGTGGAGTTTGCTACTGG+TGG | 0.490836 | tig0023210:-89832 | Msa1406570:CDS |
CGGTTGAATGCGGATAGAAC+TGG | 0.492534 | tig0023210:+90285 | None:intergenic |
GGAGAATGAGCTTCACTTGG+AGG | 0.495077 | tig0023210:-90016 | Msa1406570:CDS |
ATTGTTTGATAGTGGTGGGT+TGG | 0.495671 | tig0023210:-89884 | Msa1406570:CDS |
GCATTAGCAGCATGTATGAA+AGG | 0.496238 | tig0023210:-87439 | Msa1406570:three_prime_UTR |
CAGGAACAGGAGCAGGTGAT+GGG | 0.496867 | tig0023210:-88269 | Msa1406570:CDS |
AATACATCGACGCCGTTCGT+TGG | 0.497405 | tig0023210:-90311 | Msa1406570:CDS |
GCGTCGATGTATTTGTATTG+TGG | 0.497450 | tig0023210:+90321 | None:intergenic |
ATCGCCGCTTCAACTTCCTC+CGG | 0.500028 | tig0023210:-90102 | Msa1406570:CDS |
TGAGGAACCTATTGAGCTGC+TGG | 0.501027 | tig0023210:-88002 | Msa1406570:CDS |
CATTGATTTGATGGATGGTG+GGG | 0.506353 | tig0023210:-89983 | Msa1406570:CDS |
TCAGGAACAGGAGCAGGTGA+TGG | 0.509341 | tig0023210:-88270 | Msa1406570:CDS |
CCGTCACTGCCATTGCAAAA+GGG | 0.511367 | tig0023210:+90367 | None:intergenic |
GTGTTACTGTTGGGGATGAT+GGG | 0.513691 | tig0023210:-89954 | Msa1406570:CDS |
AAGGTGAATTTGGTTACTGT+TGG | 0.514962 | tig0023210:-89931 | Msa1406570:CDS |
GATTGGAATTCGAAAGAGAG+TGG | 0.515493 | tig0023210:+90189 | None:intergenic |
TACTGTTGGGGATGATGGGA+AGG | 0.517431 | tig0023210:-89950 | Msa1406570:CDS |
ATACTTTCAGGAACAGGAGC+AGG | 0.522485 | tig0023210:-88276 | Msa1406570:CDS |
GAACAAGAAGTGAAGTGAAC+CGG | 0.527173 | tig0023210:+90083 | None:intergenic |
CGGCGATGATTGATTTCTGA+AGG | 0.529444 | tig0023210:+90118 | None:intergenic |
CGATGCGAGGCTTGTATCTG+AGG | 0.530352 | tig0023210:-90049 | Msa1406570:CDS |
GAGGATTTGAGAGATGAGAT+TGG | 0.539351 | tig0023210:+90147 | None:intergenic |
AACTGAGAAACAGGTCCACC+GGG | 0.540426 | tig0023210:+89772 | None:intergenic |
TCCTCCGAACATATCATGGC+AGG | 0.540812 | tig0023210:+88147 | None:intergenic |
ATTTATTTGCAAATTTGGGT+GGG | 0.541888 | tig0023210:-87395 | Msa1406570:three_prime_UTR |
TGTTGCATTGATTTGATGGA+TGG | 0.542643 | tig0023210:-89988 | Msa1406570:CDS |
GCCATGATATGTTCGGAGGA+TGG | 0.543883 | tig0023210:-88144 | Msa1406570:CDS |
GGTTGAGTGTGTTACTGTTG+GGG | 0.546749 | tig0023210:-89962 | Msa1406570:CDS |
GAGAATGAGCTTCACTTGGA+GGG | 0.549667 | tig0023210:-90015 | Msa1406570:CDS |
ATGTGATATGTAGTTTAGAG+TGG | 0.549807 | tig0023210:-87683 | Msa1406570:CDS |
GAAATCGGAAGTAGCGAGAA+CGG | 0.550581 | tig0023210:+90257 | None:intergenic |
CCAAGCCAAAACAGTACCTA+AGG | 0.551483 | tig0023210:+88326 | None:intergenic |
ATCTGAAAGTGAGGTTTGGG+AGG | 0.562054 | tig0023210:-88220 | Msa1406570:CDS |
ATTTGTATTGTGGGAATCTG+TGG | 0.564070 | tig0023210:+90331 | None:intergenic |
CTCAGATACAAGCCTCGCAT+CGG | 0.564804 | tig0023210:+90050 | None:intergenic |
AGTGAAATGGGCTTCTCCTG+TGG | 0.565210 | tig0023210:-89848 | Msa1406570:CDS |
TTTGAAAGAGTGGATTTCGA+TGG | 0.570567 | tig0023210:+90218 | None:intergenic |
GATTGATTTCTGAAGGAACT+GGG | 0.570627 | tig0023210:+90125 | None:intergenic |
CTGTGGAGTTTGCTACTGGT+GGG | 0.571129 | tig0023210:-89831 | Msa1406570:CDS |
AGATACAAGCCTCGCATCGG+TGG | 0.575163 | tig0023210:+90053 | None:intergenic |
AAACTGAGAAACAGGTCCAC+CGG | 0.575931 | tig0023210:+89771 | None:intergenic |
TATTGATCGACATAATCCAT+TGG | 0.579252 | tig0023210:-87951 | Msa1406570:intron |
ATTCTTGGCGTGATTGAGCA+AGG | 0.582274 | tig0023210:-88120 | Msa1406570:intron |
ACCTGCCATGATATGTTCGG+AGG | 0.585049 | tig0023210:-88148 | Msa1406570:CDS |
AGAATGAGCTTCACTTGGAG+GGG | 0.586057 | tig0023210:-90014 | Msa1406570:CDS |
GTAAATTGTTTGATAGTGGT+GGG | 0.592376 | tig0023210:-89888 | Msa1406570:CDS |
TGTGATATGTAGTTTAGAGT+GGG | 0.593378 | tig0023210:-87682 | Msa1406570:CDS |
TCAGTCAATATCTGAAAGTG+AGG | 0.610452 | tig0023210:-88229 | Msa1406570:CDS |
TGGTGGGATCAGAGAAAACC+CGG | 0.615892 | tig0023210:-89790 | Msa1406570:CDS |
TATCATGGCAGGTAAAATCC+GGG | 0.619066 | tig0023210:+88158 | None:intergenic |
AACGGCGAAGCGGTTGAATG+CGG | 0.627680 | tig0023210:+90275 | None:intergenic |
TCGCTGATTCCACCGATGCG+AGG | 0.633426 | tig0023210:-90062 | Msa1406570:CDS |
TGAACCGGAGGAAGTTGAAG+CGG | 0.635756 | tig0023210:+90098 | None:intergenic |
AGGAACAGGAGCAGGTGATG+GGG | 0.636331 | tig0023210:-88268 | Msa1406570:CDS |
ATTAGCAGCATGTATGAAAG+GGG | 0.636875 | tig0023210:-87437 | Msa1406570:three_prime_UTR |
CCACCAGTAGCAAACTCCAC+AGG | 0.639801 | tig0023210:+89832 | None:intergenic |
TAGAACTGGAAGCCAACGAA+CGG | 0.640983 | tig0023210:+90299 | None:intergenic |
GTGATCACGTTAAATCAACA+TGG | 0.649909 | tig0023210:+87325 | None:intergenic |
AATCAAACACTTCATCTACC+CGG | 0.653812 | tig0023210:-88176 | Msa1406570:CDS |
TCAAAGCTATTGATGGCACA+AGG | 0.659949 | tig0023210:+87974 | None:intergenic |
CAAGAAGTGAAGTGAACCGG+AGG | 0.667621 | tig0023210:+90086 | None:intergenic |
TGATTTCTGAAGGAACTGGG+AGG | 0.689311 | tig0023210:+90128 | None:intergenic |
AATTCGCGCATAGTCTAGTG+AGG | 0.690151 | tig0023210:+90416 | None:intergenic |
AAGTAGCGAGAACGGCGAAG+CGG | 0.696247 | tig0023210:+90265 | None:intergenic |
TTAGCAGCATGTATGAAAGG+GGG | 0.710819 | tig0023210:-87436 | Msa1406570:three_prime_UTR |
TGGGATCAGAGAAAACCCGG+TGG | 0.782591 | tig0023210:-89787 | Msa1406570:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATATTAAAACCAATTT+TGG | + | tig0023210:88831-88850 | None:intergenic | 10.0% |
!! | GTATAAGTAAATCATATAAA+AGG | + | tig0023210:88461-88480 | None:intergenic | 15.0% |
!!! | TTTTTTAAGCTTAAAAATGT+TGG | - | tig0023210:88558-88577 | Msa1406570:intron | 15.0% |
!!! | TGGTTTTAATATTATTTTGA+TGG | - | tig0023210:88835-88854 | Msa1406570:intron | 15.0% |
!!! | AAAAATAACTGTTTTATCAT+AGG | - | tig0023210:89211-89230 | Msa1406570:intron | 15.0% |
!! | ATAAGAATTTATCAGATTAA+TGG | - | tig0023210:89269-89288 | Msa1406570:intron | 15.0% |
!!! | TATATTTTAAAAGCTATTGA+TGG | + | tig0023210:89803-89822 | None:intergenic | 15.0% |
!! | TATTTAATAGATAAACCATT+TGG | + | tig0023210:89837-89856 | None:intergenic | 15.0% |
!!! | ACATTTATTTTATCTTGTCT+TGG | - | tig0023210:88165-88184 | Msa1406570:CDS | 20.0% |
!!! | CATTTATTTTATCTTGTCTT+GGG | - | tig0023210:88166-88185 | Msa1406570:CDS | 20.0% |
!! | AAATCATATAAAAGGAATTG+AGG | + | tig0023210:88453-88472 | None:intergenic | 20.0% |
!! | AAGTAAACATAAACTGTAAA+AGG | + | tig0023210:89321-89340 | None:intergenic | 20.0% |
!! | TATACATTATAATCACCAAA+TGG | - | tig0023210:89819-89838 | Msa1406570:CDS | 20.0% |
!!! | CTAGTAAAAGAATGATTTTA+TGG | - | tig0023210:89857-89876 | Msa1406570:CDS | 20.0% |
!!! | TTGAAATTGAGAATTTTGAA+AGG | - | tig0023210:90119-90138 | Msa1406570:CDS | 20.0% |
!!! | TGAAATTGAGAATTTTGAAA+GGG | - | tig0023210:90120-90139 | Msa1406570:CDS | 20.0% |
!! | TTACAAAAGAACAATACATT+TGG | + | tig0023210:90209-90228 | None:intergenic | 20.0% |
!!! | AAAATCCATTTTCATACTAA+TGG | + | tig0023210:90234-90253 | None:intergenic | 20.0% |
!!! | ATTAGTATGAAAATGGATTT+TGG | - | tig0023210:90233-90252 | Msa1406570:CDS | 20.0% |
!! | ATTGCATTTATTTGCAAATT+TGG | - | tig0023210:90319-90338 | Msa1406570:CDS | 20.0% |
!! | TTGCATTTATTTGCAAATTT+GGG | - | tig0023210:90320-90339 | Msa1406570:CDS | 20.0% |
! | TATCGTAAATTGTTTGATAG+TGG | - | tig0023210:87827-87846 | Msa1406570:intron | 25.0% |
! | TAGCTTATGAAAATAACTTC+TGG | - | tig0023210:88124-88143 | Msa1406570:CDS | 25.0% |
!! | ATTAAGTTGTTTAACCGAAT+AGG | - | tig0023210:88277-88296 | Msa1406570:CDS | 25.0% |
! | TCTAATATTTGAACAATCCT+AGG | + | tig0023210:88305-88324 | None:intergenic | 25.0% |
! | AGGGATAAAAATTTGAATTC+TGG | - | tig0023210:88356-88375 | Msa1406570:intron | 25.0% |
! | GGGATAAAAATTTGAATTCT+GGG | - | tig0023210:88357-88376 | Msa1406570:intron | 25.0% |
!!! | TATACTTTTTTCAGTGATTG+TGG | - | tig0023210:88476-88495 | Msa1406570:intron | 25.0% |
! | TGTGTTCTTAGTATCTTATA+TGG | + | tig0023210:88872-88891 | None:intergenic | 25.0% |
! | GAGAACAAAAATATGATTCT+GGG | + | tig0023210:88914-88933 | None:intergenic | 25.0% |
! | TGAGAACAAAAATATGATTC+TGG | + | tig0023210:88915-88934 | None:intergenic | 25.0% |
! | TTGTTCTCAACTTACATTAT+TGG | - | tig0023210:88926-88945 | Msa1406570:intron | 25.0% |
! | TGTTCTCAACTTACATTATT+GGG | - | tig0023210:88927-88946 | Msa1406570:intron | 25.0% |
! | TCTTTAAATACACATGGAAT+CGG | - | tig0023210:88999-89018 | Msa1406570:intron | 25.0% |
! | GTAGGATAAATAAAGAACAT+TGG | + | tig0023210:89124-89143 | None:intergenic | 25.0% |
! | AACAAAAATTAAGACCAGAA+GGG | - | tig0023210:89144-89163 | Msa1406570:intron | 25.0% |
! | GAACATCAATAACTAAGAAA+CGG | + | tig0023210:89355-89374 | None:intergenic | 25.0% |
! | CAAATATATTCCTGATGAAT+TGG | + | tig0023210:89663-89682 | None:intergenic | 25.0% |
! | CAATTCATCAGGAATATATT+TGG | - | tig0023210:89661-89680 | Msa1406570:intron | 25.0% |
! | ATCAATATCAAAGCTATTGA+TGG | + | tig0023210:89755-89774 | None:intergenic | 25.0% |
! | TATGGAAAACATGTTATCTT+AGG | - | tig0023210:89875-89894 | Msa1406570:CDS | 25.0% |
! | AAATGATAGAGAGAAAAAAG+TGG | - | tig0023210:89959-89978 | Msa1406570:CDS | 25.0% |
! | ATGTTATTGTCTTGTCAATA+TGG | + | tig0023210:90072-90091 | None:intergenic | 25.0% |
!!! | GAAATTGAGAATTTTGAAAG+GGG | - | tig0023210:90121-90140 | Msa1406570:CDS | 25.0% |
! | TAAAGCCATTAGTATGAAAA+TGG | - | tig0023210:90226-90245 | Msa1406570:CDS | 25.0% |
! | ATTTATTTGCAAATTTGGGT+GGG | - | tig0023210:90324-90343 | Msa1406570:CDS | 25.0% |
!! | GTAAATTGTTTGATAGTGGT+GGG | - | tig0023210:87831-87850 | Msa1406570:intron | 30.0% |
TTTCTTATACGTCAGTGAAA+TGG | - | tig0023210:87858-87877 | Msa1406570:intron | 30.0% | |
TTCTTATACGTCAGTGAAAT+GGG | - | tig0023210:87859-87878 | Msa1406570:intron | 30.0% | |
TTTCTCAGTTTAAGGGTAAT+TGG | - | tig0023210:87960-87979 | Msa1406570:CDS | 30.0% | |
AGTAAGCTAAAAACAGCTTA+TGG | + | tig0023210:88086-88105 | None:intergenic | 30.0% | |
ACAACCATTTATGCTATACA+CGG | - | tig0023210:88251-88270 | Msa1406570:CDS | 30.0% | |
TTAACCGTGTATAGCATAAA+TGG | + | tig0023210:88258-88277 | None:intergenic | 30.0% | |
TTAGAGTTATACTTAGTGTG+TGG | - | tig0023210:88320-88339 | Msa1406570:CDS | 30.0% | |
TATAAAAGGAATTGAGGAGT+GGG | + | tig0023210:88447-88466 | None:intergenic | 30.0% | |
ATATAAAAGGAATTGAGGAG+TGG | + | tig0023210:88448-88467 | None:intergenic | 30.0% | |
! | TTTTCAGTGATTGTGGATTT+TGG | - | tig0023210:88483-88502 | Msa1406570:intron | 30.0% |
TCTGAACTAAAATAAGTCTG+TGG | - | tig0023210:88523-88542 | Msa1406570:intron | 30.0% | |
! | ATCTATCCAACTAGTTGTTT+TGG | - | tig0023210:88666-88685 | Msa1406570:intron | 30.0% |
AACTATCCAAAACAACTAGT+TGG | + | tig0023210:88675-88694 | None:intergenic | 30.0% | |
TTTCAGTATAGACCAATAAG+GGG | + | tig0023210:88709-88728 | None:intergenic | 30.0% | |
GTTTCAGTATAGACCAATAA+GGG | + | tig0023210:88710-88729 | None:intergenic | 30.0% | |
AGTTTCAGTATAGACCAATA+AGG | + | tig0023210:88711-88730 | None:intergenic | 30.0% | |
GTATCTTATATGGCATCTTT+AGG | + | tig0023210:88862-88881 | None:intergenic | 30.0% | |
! | TCTGGGATTACAGTAAAAAT+GGG | + | tig0023210:88897-88916 | None:intergenic | 30.0% |
!! | TTCTGGGATTACAGTAAAAA+TGG | + | tig0023210:88898-88917 | None:intergenic | 30.0% |
ATTTAAAGAGTTCCCATAGT+GGG | + | tig0023210:88988-89007 | None:intergenic | 30.0% | |
TATTTAAAGAGTTCCCATAG+TGG | + | tig0023210:88989-89008 | None:intergenic | 30.0% | |
!!! | CTGGTCTTAATTTTTGTTGT+AGG | + | tig0023210:89142-89161 | None:intergenic | 30.0% |
CAACAAAAATTAAGACCAGA+AGG | - | tig0023210:89143-89162 | Msa1406570:intron | 30.0% | |
! | ACTTTCAGATATTGACTGAA+TGG | + | tig0023210:89489-89508 | None:intergenic | 30.0% |
AATATCTGAAAGTGAGGTTT+GGG | - | tig0023210:89496-89515 | Msa1406570:intron | 30.0% | |
GTTAAAAATGCCAATTCATC+AGG | - | tig0023210:89650-89669 | Msa1406570:intron | 30.0% | |
TATTGATCGACATAATCCAT+TGG | - | tig0023210:89768-89787 | Msa1406570:CDS | 30.0% | |
GAACAATAACATCATCAGAA+AGG | + | tig0023210:90008-90027 | None:intergenic | 30.0% | |
ATGTGATATGTAGTTTAGAG+TGG | - | tig0023210:90036-90055 | Msa1406570:CDS | 30.0% | |
! | TGTGATATGTAGTTTAGAGT+GGG | - | tig0023210:90037-90056 | Msa1406570:CDS | 30.0% |
!! | ATGAAAATGGATTTTGGCAT+TGG | - | tig0023210:90239-90258 | Msa1406570:CDS | 30.0% |
CATTTATTTGCAAATTTGGG+TGG | - | tig0023210:90323-90342 | Msa1406570:CDS | 30.0% | |
ATGAAGATACAATGACAATC+AGG | + | tig0023210:90358-90377 | None:intergenic | 30.0% | |
CATAGTCTAGTGAGGAAAAT+GGG | + | tig0023210:87298-87317 | None:intergenic | 35.0% | |
! | AAGCATAAACCCTTTTGCAA+TGG | - | tig0023210:87343-87362 | Msa1406570:three_prime_UTR | 35.0% |
ATTTGTATTGTGGGAATCTG+TGG | + | tig0023210:87391-87410 | None:intergenic | 35.0% | |
CGTCGATGTATTTGTATTGT+GGG | + | tig0023210:87400-87419 | None:intergenic | 35.0% | |
AGAGAGATTGGAATCGAAAT+CGG | + | tig0023210:87480-87499 | None:intergenic | 35.0% | |
! | TTTGAAAGAGTGGATTTCGA+TGG | + | tig0023210:87504-87523 | None:intergenic | 35.0% |
! | AATTCGAAAGAGAGTGGATT+TGG | + | tig0023210:87527-87546 | None:intergenic | 35.0% |
CTTTCGAATTCCAATCTTCA+TGG | - | tig0023210:87537-87556 | Msa1406570:three_prime_UTR | 35.0% | |
! | GATTGATTTCTGAAGGAACT+GGG | + | tig0023210:87597-87616 | None:intergenic | 35.0% |
! | TGATTGATTTCTGAAGGAAC+TGG | + | tig0023210:87598-87617 | None:intergenic | 35.0% |
! | TGTATCTGAGGTATCTGTTT+CGG | - | tig0023210:87682-87701 | Msa1406570:CDS | 35.0% |
!! | GAAGTGTTGCATTGATTTGA+TGG | - | tig0023210:87727-87746 | Msa1406570:intron | 35.0% |
!! | TGTTGCATTGATTTGATGGA+TGG | - | tig0023210:87731-87750 | Msa1406570:intron | 35.0% |
AAGGTGAATTTGGTTACTGT+TGG | - | tig0023210:87788-87807 | Msa1406570:intron | 35.0% | |
!! | CGTAAATTGTTTGATAGTGG+TGG | - | tig0023210:87830-87849 | Msa1406570:intron | 35.0% |
TTACCCTTAAACTGAGAAAC+AGG | + | tig0023210:87959-87978 | None:intergenic | 35.0% | |
TACTCTCAAGTCTCAACTAA+AGG | + | tig0023210:88002-88021 | None:intergenic | 35.0% | |
AAACACTCGTGATATCATGT+AGG | - | tig0023210:88032-88051 | Msa1406570:intron | 35.0% | |
AGTTATACTTAGTGTGTGGT+TGG | - | tig0023210:88324-88343 | Msa1406570:CDS | 35.0% | |
AGACAAGTATGCTTTCTTGA+TGG | + | tig0023210:88407-88426 | None:intergenic | 35.0% | |
! | ATCAAGAAAGCATACTTGTC+TGG | - | tig0023210:88406-88425 | Msa1406570:intron | 35.0% |
ATAAAAGGAATTGAGGAGTG+GGG | + | tig0023210:88446-88465 | None:intergenic | 35.0% | |
TTCAGAAATTCAGACCACAA+TGG | + | tig0023210:88509-88528 | None:intergenic | 35.0% | |
TTCAACTTTCAACCCCTTAT+TGG | - | tig0023210:88694-88713 | Msa1406570:intron | 35.0% | |
TGCAATGCTAGAACCAAAAT+TGG | - | tig0023210:88815-88834 | Msa1406570:intron | 35.0% | |
GGGAACTCTTTAAATACACA+TGG | - | tig0023210:88993-89012 | Msa1406570:intron | 35.0% | |
TCGCTAGAATTAAGAATACG+AGG | - | tig0023210:89046-89065 | Msa1406570:intron | 35.0% | |
CGCTAGAATTAAGAATACGA+GGG | - | tig0023210:89047-89066 | Msa1406570:intron | 35.0% | |
CAACAACCGATTATACTTTC+AGG | - | tig0023210:89431-89450 | Msa1406570:intron | 35.0% | |
! | CCTGTTCCTGAAAGTATAAT+CGG | + | tig0023210:89440-89459 | None:intergenic | 35.0% |
TCAGTCAATATCTGAAAGTG+AGG | - | tig0023210:89490-89509 | Msa1406570:intron | 35.0% | |
CAATATCTGAAAGTGAGGTT+TGG | - | tig0023210:89495-89514 | Msa1406570:intron | 35.0% | |
AATCAAACACTTCATCTACC+CGG | - | tig0023210:89543-89562 | Msa1406570:intron | 35.0% | |
ATATCATGGCAGGTAAAATC+CGG | + | tig0023210:89565-89584 | None:intergenic | 35.0% | |
TTTACCTGCCATGATATGTT+CGG | - | tig0023210:89568-89587 | Msa1406570:intron | 35.0% | |
GACATAATCCATTGGTAAGT+GGG | - | tig0023210:89776-89795 | Msa1406570:CDS | 35.0% | |
ACATAATCCATTGGTAAGTG+GGG | - | tig0023210:89777-89796 | Msa1406570:CDS | 35.0% | |
TAGCAACGATGTAAAAACAC+CGG | + | tig0023210:89915-89934 | None:intergenic | 35.0% | |
AAGTGGTAACTAGATGAATG+TGG | - | tig0023210:89976-89995 | Msa1406570:CDS | 35.0% | |
ATGATGTTATTGTTCCATGC+AGG | - | tig0023210:90013-90032 | Msa1406570:CDS | 35.0% | |
!! | AAAATGGATTTTGGCATTGG+CGG | - | tig0023210:90242-90261 | Msa1406570:CDS | 35.0% |
CATTAGCAGCATGTATGAAA+GGG | - | tig0023210:90281-90300 | Msa1406570:CDS | 35.0% | |
ATTAGCAGCATGTATGAAAG+GGG | - | tig0023210:90282-90301 | Msa1406570:CDS | 35.0% | |
GTGATCACGTTAAATCAACA+TGG | + | tig0023210:90397-90416 | None:intergenic | 35.0% | |
GCATAGTCTAGTGAGGAAAA+TGG | + | tig0023210:87299-87318 | None:intergenic | 40.0% | |
! | GCGTCGATGTATTTGTATTG+TGG | + | tig0023210:87401-87420 | None:intergenic | 40.0% |
GATTTCGATGGAAGAGAGAT+TGG | + | tig0023210:87492-87511 | None:intergenic | 40.0% | |
!! | GTGGATTTGGTTTGAAAGAG+TGG | + | tig0023210:87514-87533 | None:intergenic | 40.0% |
GATTGGAATTCGAAAGAGAG+TGG | + | tig0023210:87533-87552 | None:intergenic | 40.0% | |
AAGGAGAAGTCCATGAAGAT+TGG | + | tig0023210:87550-87569 | None:intergenic | 40.0% | |
TTGAGAGATGAGATTGGTGA+AGG | + | tig0023210:87569-87588 | None:intergenic | 40.0% | |
GAGGATTTGAGAGATGAGAT+TGG | + | tig0023210:87575-87594 | None:intergenic | 40.0% | |
GAACAAGAAGTGAAGTGAAC+CGG | + | tig0023210:87639-87658 | None:intergenic | 40.0% | |
!! | TGCATTGATTTGATGGATGG+TGG | - | tig0023210:87734-87753 | Msa1406570:intron | 40.0% |
!! | GCATTGATTTGATGGATGGT+GGG | - | tig0023210:87735-87754 | Msa1406570:intron | 40.0% |
!! | CATTGATTTGATGGATGGTG+GGG | - | tig0023210:87736-87755 | Msa1406570:intron | 40.0% |
!! | ATTGTTTGATAGTGGTGGGT+TGG | - | tig0023210:87835-87854 | Msa1406570:intron | 40.0% |
! | GGTATGGATTTGGTCTTCAT+TGG | - | tig0023210:87909-87928 | Msa1406570:intron | 40.0% |
! | ATGGATTTGGTCTTCATTGG+TGG | - | tig0023210:87912-87931 | Msa1406570:intron | 40.0% |
! | TGGATTTGGTCTTCATTGGT+GGG | - | tig0023210:87913-87932 | Msa1406570:intron | 40.0% |
! | TGGACCTGTTTCTCAGTTTA+AGG | - | tig0023210:87952-87971 | Msa1406570:CDS | 40.0% |
! | GGACCTGTTTCTCAGTTTAA+GGG | - | tig0023210:87953-87972 | Msa1406570:CDS | 40.0% |
CTTACTTCTGTACACTCTCT+AGG | - | tig0023210:88100-88119 | Msa1406570:intron | 40.0% | |
AACAATCCTAGGCTCCTATT+CGG | + | tig0023210:88294-88313 | None:intergenic | 40.0% | |
!!! | TGTGTGGTTGGTTTTTTTGC+AGG | - | tig0023210:88336-88355 | Msa1406570:CDS | 40.0% |
!!! | GTGTGGTTGGTTTTTTTGCA+GGG | - | tig0023210:88337-88356 | Msa1406570:CDS | 40.0% |
TAAAAGGAATTGAGGAGTGG+GGG | + | tig0023210:88445-88464 | None:intergenic | 40.0% | |
!! | ATTGTGGATTTTGGCCATTG+TGG | - | tig0023210:88492-88511 | Msa1406570:intron | 40.0% |
ACAGTTCTTATGCCAAAAGG+TGG | + | tig0023210:88965-88984 | None:intergenic | 40.0% | |
CATAAGAACTGTCCCACTAT+GGG | - | tig0023210:88973-88992 | Msa1406570:intron | 40.0% | |
ACGAGCTTCTTTACTTGTCT+TGG | + | tig0023210:89080-89099 | None:intergenic | 40.0% | |
GATGAAAAACAGTTCCCTTC+TGG | + | tig0023210:89161-89180 | None:intergenic | 40.0% | |
TAATGGTTTAGAGAGCTGAG+TGG | - | tig0023210:89286-89305 | Msa1406570:intron | 40.0% | |
AGTTATTGATGTTCCCTCTC+AGG | - | tig0023210:89361-89380 | Msa1406570:CDS | 40.0% | |
!!! | CTTAGGTACTGTTTTGGCTT+GGG | - | tig0023210:89394-89413 | Msa1406570:intron | 40.0% |
CCGATTATACTTTCAGGAAC+AGG | - | tig0023210:89437-89456 | Msa1406570:intron | 40.0% | |
TATCATGGCAGGTAAAATCC+GGG | + | tig0023210:89564-89583 | None:intergenic | 40.0% | |
! | TCAAAGCTATTGATGGCACA+AGG | + | tig0023210:89748-89767 | None:intergenic | 40.0% |
CGACATAATCCATTGGTAAG+TGG | - | tig0023210:89775-89794 | Msa1406570:CDS | 40.0% | |
TTAGGACGATTCTTCTGTTC+CGG | - | tig0023210:89893-89912 | Msa1406570:CDS | 40.0% | |
ACTACATATCACATCCTGCA+TGG | + | tig0023210:90030-90049 | None:intergenic | 40.0% | |
TTTGTAGCTGATGGAAGAAC+TGG | - | tig0023210:90150-90169 | Msa1406570:CDS | 40.0% | |
GCATTAGCAGCATGTATGAA+AGG | - | tig0023210:90280-90299 | Msa1406570:CDS | 40.0% | |
TTAGCAGCATGTATGAAAGG+GGG | - | tig0023210:90283-90302 | Msa1406570:CDS | 40.0% | |
AATTCGCGCATAGTCTAGTG+AGG | + | tig0023210:87306-87325 | None:intergenic | 45.0% | |
TAGAACTGGAAGCCAACGAA+CGG | + | tig0023210:87423-87442 | None:intergenic | 45.0% | |
GAAATCGGAAGTAGCGAGAA+CGG | + | tig0023210:87465-87484 | None:intergenic | 45.0% | |
! | TGATTTCTGAAGGAACTGGG+AGG | + | tig0023210:87594-87613 | None:intergenic | 45.0% |
! | CGGCGATGATTGATTTCTGA+AGG | + | tig0023210:87604-87623 | None:intergenic | 45.0% |
TTCGGAGAATGAGCTTCACT+TGG | - | tig0023210:87700-87719 | Msa1406570:intron | 45.0% | |
GAGAATGAGCTTCACTTGGA+GGG | - | tig0023210:87704-87723 | Msa1406570:intron | 45.0% | |
AGAATGAGCTTCACTTGGAG+GGG | - | tig0023210:87705-87724 | Msa1406570:intron | 45.0% | |
! | GGGTTGAGTGTGTTACTGTT+GGG | - | tig0023210:87756-87775 | Msa1406570:intron | 45.0% |
! | GGTTGAGTGTGTTACTGTTG+GGG | - | tig0023210:87757-87776 | Msa1406570:intron | 45.0% |
! | TGTGTTACTGTTGGGGATGA+TGG | - | tig0023210:87764-87783 | Msa1406570:intron | 45.0% |
! | GTGTTACTGTTGGGGATGAT+GGG | - | tig0023210:87765-87784 | Msa1406570:intron | 45.0% |
!! | GGATGATGGGAAGGTGAATT+TGG | - | tig0023210:87778-87797 | Msa1406570:intron | 45.0% |
AAACTGAGAAACAGGTCCAC+CGG | + | tig0023210:87951-87970 | None:intergenic | 45.0% | |
GTTTAACCGAATAGGAGCCT+AGG | - | tig0023210:88285-88304 | Msa1406570:CDS | 45.0% | |
AATCACACATGCAGACACAG+TGG | + | tig0023210:88737-88756 | None:intergenic | 45.0% | |
ACTGTGTCTGCATGTGTGAT+TGG | - | tig0023210:88736-88755 | Msa1406570:intron | 45.0% | |
! | TCCCACAATTCACCACCTTT+TGG | - | tig0023210:88950-88969 | Msa1406570:intron | 45.0% |
GCCAAAAGGTGGTGAATTGT+GGG | + | tig0023210:88954-88973 | None:intergenic | 45.0% | |
TGCCAAAAGGTGGTGAATTG+TGG | + | tig0023210:88955-88974 | None:intergenic | 45.0% | |
GGGACAGTTCTTATGCCAAA+AGG | + | tig0023210:88968-88987 | None:intergenic | 45.0% | |
GCATAAGAACTGTCCCACTA+TGG | - | tig0023210:88972-88991 | Msa1406570:intron | 45.0% | |
TGGAATCGGCAAATCCCTTA+AGG | - | tig0023210:89013-89032 | Msa1406570:intron | 45.0% | |
GGAATCGGCAAATCCCTTAA+GGG | - | tig0023210:89014-89033 | Msa1406570:intron | 45.0% | |
!! | TGGCTCCTTAGGTACTGTTT+TGG | - | tig0023210:89388-89407 | Msa1406570:intron | 45.0% |
CCAAGCCAAAACAGTACCTA+AGG | + | tig0023210:89396-89415 | None:intergenic | 45.0% | |
!!! | CCTTAGGTACTGTTTTGGCT+TGG | - | tig0023210:89393-89412 | Msa1406570:intron | 45.0% |
!!! | CTGTTTTGGCTTGGGATCTT+AGG | - | tig0023210:89402-89421 | Msa1406570:intron | 45.0% |
ATACTTTCAGGAACAGGAGC+AGG | - | tig0023210:89443-89462 | Msa1406570:intron | 45.0% | |
ATCTGAAAGTGAGGTTTGGG+AGG | - | tig0023210:89499-89518 | Msa1406570:intron | 45.0% | |
TCCATCCTCCGAACATATCA+TGG | + | tig0023210:89579-89598 | None:intergenic | 45.0% | |
TGTTCGGAGGATGGAATTCT+TGG | - | tig0023210:89584-89603 | Msa1406570:intron | 45.0% | |
ATTCTTGGCGTGATTGAGCA+AGG | - | tig0023210:89599-89618 | Msa1406570:intron | 45.0% | |
GTTGTGTTCTTACATCGCCT+AGG | - | tig0023210:89694-89713 | Msa1406570:intron | 45.0% | |
! | GGGTAGCATTTTGTAGCTGA+TGG | - | tig0023210:90141-90160 | Msa1406570:CDS | 45.0% |
CTAGACTATGCGCGAATTGC+AGG | - | tig0023210:87308-87327 | Msa1406570:three_prime_UTR | 50.0% | |
CCGTCACTGCCATTGCAAAA+GGG | + | tig0023210:87355-87374 | None:intergenic | 50.0% | |
! | CCCTTTTGCAATGGCAGTGA+CGG | - | tig0023210:87352-87371 | Msa1406570:three_prime_UTR | 50.0% |
AATACATCGACGCCGTTCGT+TGG | - | tig0023210:87408-87427 | Msa1406570:three_prime_UTR | 50.0% | |
CGGTTGAATGCGGATAGAAC+TGG | + | tig0023210:87437-87456 | None:intergenic | 50.0% | |
TGAACCGGAGGAAGTTGAAG+CGG | + | tig0023210:87624-87643 | None:intergenic | 50.0% | |
CAAGAAGTGAAGTGAACCGG+AGG | + | tig0023210:87636-87655 | None:intergenic | 50.0% | |
CTCAGATACAAGCCTCGCAT+CGG | + | tig0023210:87672-87691 | None:intergenic | 50.0% | |
GGAGAATGAGCTTCACTTGG+AGG | - | tig0023210:87703-87722 | Msa1406570:intron | 50.0% | |
! | GGGGTTGAGTGTGTTACTGT+TGG | - | tig0023210:87755-87774 | Msa1406570:intron | 50.0% |
!! | TACTGTTGGGGATGATGGGA+AGG | - | tig0023210:87769-87788 | Msa1406570:intron | 50.0% |
! | AGTGAAATGGGCTTCTCCTG+TGG | - | tig0023210:87871-87890 | Msa1406570:intron | 50.0% |
!! | TCTCCTGTGGAGTTTGCTAC+TGG | - | tig0023210:87884-87903 | Msa1406570:intron | 50.0% |
!! | CTGTGGAGTTTGCTACTGGT+GGG | - | tig0023210:87888-87907 | Msa1406570:intron | 50.0% |
!! | GAGTTTGCTACTGGTGGGTA+TGG | - | tig0023210:87893-87912 | Msa1406570:intron | 50.0% |
! | GCTACTGGTGGGTATGGATT+TGG | - | tig0023210:87899-87918 | Msa1406570:intron | 50.0% |
TGGTGGGATCAGAGAAAACC+CGG | - | tig0023210:87929-87948 | Msa1406570:intron | 50.0% | |
AACTGAGAAACAGGTCCACC+GGG | + | tig0023210:87950-87969 | None:intergenic | 50.0% | |
ACCTGCCATGATATGTTCGG+AGG | - | tig0023210:89571-89590 | Msa1406570:intron | 50.0% | |
TCCTCCGAACATATCATGGC+AGG | + | tig0023210:89575-89594 | None:intergenic | 50.0% | |
GCCATGATATGTTCGGAGGA+TGG | - | tig0023210:89575-89594 | Msa1406570:intron | 50.0% | |
GTTCTTACATCGCCTAGGTG+AGG | - | tig0023210:89699-89718 | Msa1406570:intron | 50.0% | |
GCTCAATAGGTTCCTCACCT+AGG | + | tig0023210:89714-89733 | None:intergenic | 50.0% | |
TGAGGAACCTATTGAGCTGC+TGG | - | tig0023210:89717-89736 | Msa1406570:intron | 50.0% | |
! | TTGATGGCCCCACTTACCAA+TGG | + | tig0023210:89787-89806 | None:intergenic | 50.0% |
GCCGTCACTGCCATTGCAAA+AGG | + | tig0023210:87356-87375 | None:intergenic | 55.0% | |
AACGGCGAAGCGGTTGAATG+CGG | + | tig0023210:87447-87466 | None:intergenic | 55.0% | |
AAGTAGCGAGAACGGCGAAG+CGG | + | tig0023210:87457-87476 | None:intergenic | 55.0% | |
ATCGCCGCTTCAACTTCCTC+CGG | - | tig0023210:87617-87636 | Msa1406570:three_prime_UTR | 55.0% | |
AGATACAAGCCTCGCATCGG+TGG | + | tig0023210:87669-87688 | None:intergenic | 55.0% | |
CGATGCGAGGCTTGTATCTG+AGG | - | tig0023210:87670-87689 | Msa1406570:CDS | 55.0% | |
CCACCAGTAGCAAACTCCAC+AGG | + | tig0023210:87890-87909 | None:intergenic | 55.0% | |
!! | CCTGTGGAGTTTGCTACTGG+TGG | - | tig0023210:87887-87906 | Msa1406570:intron | 55.0% |
TGGGATCAGAGAAAACCCGG+TGG | - | tig0023210:87932-87951 | Msa1406570:intron | 55.0% | |
GCGAGCTGTTGCACCCTTAA+GGG | + | tig0023210:89030-89049 | None:intergenic | 55.0% | |
AGCGAGCTGTTGCACCCTTA+AGG | + | tig0023210:89031-89050 | None:intergenic | 55.0% | |
TAGAGAGCTGAGTGGCTGCA+TGG | - | tig0023210:89294-89313 | Msa1406570:intron | 55.0% | |
TCAGGAACAGGAGCAGGTGA+TGG | - | tig0023210:89449-89468 | Msa1406570:intron | 55.0% | |
CAGGAACAGGAGCAGGTGAT+GGG | - | tig0023210:89450-89469 | Msa1406570:intron | 55.0% | |
AGGAACAGGAGCAGGTGATG+GGG | - | tig0023210:89451-89470 | Msa1406570:intron | 55.0% | |
GGTTCTGCCAGCAGCTCAAT+AGG | + | tig0023210:89727-89746 | None:intergenic | 55.0% | |
!! | TCGCTGATTCCACCGATGCG+AGG | - | tig0023210:87657-87676 | Msa1406570:CDS | 60.0% |
GATGTTCCCTCTCAGGCTGC+TGG | - | tig0023210:89368-89387 | Msa1406570:intron | 60.0% | |
AAGGAGCCAGCAGCCTGAGA+GGG | + | tig0023210:89377-89396 | None:intergenic | 60.0% | |
TAAGGAGCCAGCAGCCTGAG+AGG | + | tig0023210:89378-89397 | None:intergenic | 60.0% | |
!! | TCTCAGGCTGCTGGCTCCTT+AGG | - | tig0023210:89377-89396 | Msa1406570:intron | 60.0% |
!! | ACAGGAGCAGGTGATGGGGC+TGG | - | tig0023210:89455-89474 | Msa1406570:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0023210 | gene | 87290 | 90451 | 87290 | ID=Msa1406570;Name=Msa1406570 |
tig0023210 | mRNA | 87290 | 90451 | 87290 | ID=Msa1406570-mRNA-1;Parent=Msa1406570;Name=Msa1406570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=72|1|1|1|1|1|5|363|351 |
tig0023210 | exon | 87290 | 87706 | 87290 | ID=Msa1406570-mRNA-1:exon:24618;Parent=Msa1406570-mRNA-1 |
tig0023210 | exon | 87952 | 88025 | 87952 | ID=Msa1406570-mRNA-1:exon:24617;Parent=Msa1406570-mRNA-1 |
tig0023210 | exon | 88121 | 88358 | 88121 | ID=Msa1406570-mRNA-1:exon:24616;Parent=Msa1406570-mRNA-1 |
tig0023210 | exon | 89314 | 89383 | 89314 | ID=Msa1406570-mRNA-1:exon:24615;Parent=Msa1406570-mRNA-1 |
tig0023210 | exon | 89760 | 90451 | 89760 | ID=Msa1406570-mRNA-1:exon:24614;Parent=Msa1406570-mRNA-1 |
tig0023210 | five_prime_UTR | 90380 | 90451 | 90380 | ID=Msa1406570-mRNA-1:five_prime_utr;Parent=Msa1406570-mRNA-1 |
tig0023210 | CDS | 89760 | 90379 | 89760 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
tig0023210 | CDS | 89314 | 89383 | 89314 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
tig0023210 | CDS | 88121 | 88358 | 88121 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
tig0023210 | CDS | 87952 | 88025 | 87952 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
tig0023210 | CDS | 87653 | 87706 | 87653 | ID=Msa1406570-mRNA-1:cds;Parent=Msa1406570-mRNA-1 |
tig0023210 | three_prime_UTR | 87290 | 87652 | 87290 | ID=Msa1406570-mRNA-1:three_prime_utr;Parent=Msa1406570-mRNA-1 |
Gene Sequence |
Protein sequence |