AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0876800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0876800 MtrunA17_Chr6g0458061 96.622 444 15 0 1 444 1 444 0.0 899
Msa0876800 MtrunA17_Chr2g0296401 30.000 150 105 0 43 192 202 351 2.54e-16 81.6
Msa0876800 MtrunA17_Chr8g0375231 33.784 148 98 0 48 195 257 404 8.67e-16 80.1
Msa0876800 MtrunA17_Chr6g0482561 23.889 360 250 13 33 383 26 370 1.39e-14 75.1
Msa0876800 MtrunA17_Chr1g0162281 24.540 326 196 9 44 366 263 541 1.85e-14 75.9
Msa0876800 MtrunA17_Chr1g0162281 20.091 438 289 12 38 430 147 568 3.48e-12 68.6
Msa0876800 MtrunA17_Chr6g0482611 23.464 358 254 10 33 383 192 536 5.21e-14 73.9
Msa0876800 MtrunA17_Chr3g0136851 26.174 149 110 0 48 196 939 1087 7.84e-14 73.9
Msa0876800 MtrunA17_Chr3g0136851 23.372 261 180 4 67 320 222 469 1.59e-11 66.6
Msa0876800 MtrunA17_Chr4g0038401 22.546 377 245 10 67 408 485 849 9.30e-14 73.6
Msa0876800 MtrunA17_Chr6g0482541 21.662 337 249 7 38 369 31 357 1.24e-13 72.4
Msa0876800 MtrunA17_Chr2g0290451 26.275 255 174 7 44 294 286 530 1.35e-13 73.2
Msa0876800 MtrunA17_Chr8g0391651 26.829 164 116 2 34 195 371 532 1.65e-13 72.8
Msa0876800 MtrunA17_Chr6g0473261 25.161 155 116 0 38 192 378 532 3.51e-13 71.6
Msa0876800 MtrunA17_Chr1g0182521 28.571 161 115 0 34 194 436 596 3.58e-13 71.6
Msa0876800 MtrunA17_Chr5g0446031 24.521 261 175 4 44 304 621 859 4.38e-13 71.6
Msa0876800 MtrunA17_Chr6g0481621 21.345 342 255 6 44 383 224 553 6.87e-13 70.5
Msa0876800 MtrunA17_Chr6g0482821 23.611 360 251 13 33 383 190 534 7.43e-13 70.5
Msa0876800 MtrunA17_Chr6g0482601 23.611 360 251 13 33 383 99 443 8.49e-13 70.1
Msa0876800 MtrunA17_Chr6g0481971 21.739 345 250 8 44 383 195 524 1.07e-12 70.1
Msa0876800 MtrunA17_Chr6g0473461 23.490 149 114 0 44 192 6 154 1.14e-12 67.0
Msa0876800 MtrunA17_Chr6g0478261 24.128 344 243 11 44 383 200 529 1.28e-12 69.7
Msa0876800 MtrunA17_Chr1g0200211 24.242 264 188 7 66 326 302 556 1.36e-12 70.1
Msa0876800 MtrunA17_Chr3g0116201 23.810 168 124 1 25 192 236 399 1.40e-12 69.3
Msa0876800 MtrunA17_Chr6g0473481 24.516 155 117 0 38 192 330 484 1.47e-12 69.3
Msa0876800 MtrunA17_Chr6g0473511 24.516 155 117 0 38 192 330 484 1.47e-12 69.3
Msa0876800 MtrunA17_Chr4g0052491 26.554 177 128 1 34 210 311 485 3.47e-12 68.6
Msa0876800 MtrunA17_Chr8g0387281 28.859 149 106 0 44 192 314 462 4.25e-12 68.2
Msa0876800 MtrunA17_Chr7g0220501 27.326 172 125 0 35 206 344 515 5.17e-12 68.2
Msa0876800 MtrunA17_Chr1g0162741 27.976 168 121 0 39 206 273 440 5.34e-12 67.8
Msa0876800 MtrunA17_Chr6g0482571 23.030 165 127 0 37 201 192 356 5.39e-12 67.4
Msa0876800 MtrunA17_Chr4g0060341 21.779 326 219 6 17 326 243 548 6.23e-12 67.8
Msa0876800 MtrunA17_Chr4g0037841 21.779 326 219 6 17 326 243 548 7.77e-12 67.4
Msa0876800 MtrunA17_Chr3g0099661 22.896 297 205 6 34 321 476 757 9.22e-12 67.4
Msa0876800 MtrunA17_Chr3g0099661 28.571 126 90 0 67 192 299 424 3.68e-11 65.5
Msa0876800 MtrunA17_Chr6g0473031 26.452 155 114 0 38 192 344 498 9.29e-12 67.0
Msa0876800 MtrunA17_Chr6g0482791 27.564 156 109 2 39 192 330 483 1.09e-11 66.6
Msa0876800 MtrunA17_Chr6g0482901 26.923 156 110 2 39 192 342 495 1.17e-11 66.6
Msa0876800 MtrunA17_Chr6g0473491 23.077 156 120 0 37 192 329 484 1.26e-11 66.6
Msa0876800 MtrunA17_Chr5g0446971 32.558 129 80 2 71 195 1 126 1.28e-11 62.8
Msa0876800 MtrunA17_Chr1g0194281 27.703 148 98 3 39 181 154 297 1.31e-11 66.6
Msa0876800 MtrunA17_Chr7g0220481 26.744 172 126 0 35 206 309 480 1.44e-11 66.6
Msa0876800 MtrunA17_Chr6g0473151 25.610 164 111 3 38 191 260 422 1.51e-11 66.2
Msa0876800 MtrunA17_Chr6g0473251 26.923 156 109 3 38 192 330 481 1.68e-11 66.2
Msa0876800 MtrunA17_Chr4g0076151 25.581 172 126 2 34 204 310 480 1.77e-11 66.2
Msa0876800 MtrunA17_Chr8g0392911 23.875 289 207 5 44 329 404 682 1.77e-11 66.2
Msa0876800 MtrunA17_Chr2g0296811 22.892 166 128 0 38 203 3 168 1.91e-11 63.5
Msa0876800 MtrunA17_Chr6g0473331 25.161 155 116 0 38 192 368 522 2.14e-11 65.9
Msa0876800 MtrunA17_Chr6g0471871 23.810 147 112 0 42 188 345 491 2.79e-11 65.5
Msa0876800 MtrunA17_Chr2g0290441 28.169 142 101 1 44 184 288 429 2.81e-11 65.9
Msa0876800 MtrunA17_Chr8g0369641 21.036 309 228 5 37 340 483 780 2.89e-11 65.9
Msa0876800 MtrunA17_Chr6g0473351 24.516 155 114 1 38 192 330 481 3.04e-11 65.5
Msa0876800 MtrunA17_Chr7g0241871 24.150 294 196 8 83 367 132 407 3.46e-11 65.5
Msa0876800 MtrunA17_Chr7g0241871 24.275 276 160 9 48 319 167 397 3.52e-11 65.5
Msa0876800 MtrunA17_Chr4g0059641 22.581 155 120 0 38 192 108 262 3.58e-11 64.3
Msa0876800 MtrunA17_Chr6g0482651 25.309 162 112 1 39 191 328 489 3.78e-11 65.1
Msa0876800 MtrunA17_Chr6g0478291 24.540 163 114 1 38 191 337 499 3.84e-11 65.1
Msa0876800 MtrunA17_Chr6g0482971 26.282 156 111 2 39 192 328 481 3.85e-11 65.1
Msa0876800 MtrunA17_Chr6g0481981 26.282 156 115 0 39 194 171 326 4.13e-11 64.7
Msa0876800 MtrunA17_Chr5g0419551 26.087 161 118 1 35 194 344 504 4.24e-11 65.1
Msa0876800 MtrunA17_Chr6g0481431 24.051 158 120 0 44 201 44 201 4.66e-11 63.2
Msa0876800 MtrunA17_Chr5g0417961 26.752 157 115 0 35 191 261 417 4.83e-11 65.1
Msa0876800 MtrunA17_Chr7g0218641 23.718 156 119 0 37 192 331 486 4.86e-11 64.7
Msa0876800 MtrunA17_Chr3g0143411 29.530 149 105 0 44 192 281 429 4.89e-11 64.7
Msa0876800 MtrunA17_Chr6g0473501 23.077 156 120 0 37 192 224 379 5.46e-11 64.3
Msa0876800 MtrunA17_Chr6g0473471 23.077 156 120 0 37 192 224 379 6.15e-11 64.3
Msa0876800 MtrunA17_Chr7g0256621 26.974 152 110 1 44 194 254 405 6.51e-11 64.3
Msa0876800 MtrunA17_Chr2g0297991 31.333 150 101 2 44 192 447 595 6.66e-11 64.7
Msa0876800 MtrunA17_Chr1g0160881 26.562 128 94 0 65 192 437 564 8.48e-11 64.3
Msa0876800 MtrunA17_Chr6g0482991 22.989 174 128 2 66 239 7 174 8.93e-11 61.2
Msa0876800 MtrunA17_Chr2g0292711 28.276 145 104 0 48 192 433 577 9.43e-11 63.9
Msa0876800 MtrunA17_Chr3g0102971 24.359 156 114 2 39 192 84 237 9.79e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0876800 AT4G35850.1 56.561 442 185 3 1 441 1 436 0.0 540
Msa0876800 AT5G61990.1 24.194 310 221 4 35 340 407 706 1.80e-17 85.9
Msa0876800 AT5G16640.1 23.039 408 284 10 20 416 88 476 7.38e-14 73.9
Msa0876800 AT2G02150.1 24.342 304 208 5 45 340 262 551 3.20e-13 72.4
Msa0876800 AT2G02150.2 24.342 304 208 5 45 340 262 551 3.20e-13 72.4
Msa0876800 AT1G09900.1 24.646 353 205 13 8 324 150 477 3.37e-13 72.0
Msa0876800 AT1G64583.2 24.299 321 222 8 3 319 46 349 4.29e-13 71.6
Msa0876800 AT2G37230.1 26.000 150 111 0 43 192 218 367 4.83e-13 71.6
Msa0876800 AT1G64583.1 24.062 320 226 7 4 319 68 374 5.91e-13 71.2
Msa0876800 AT5G64320.1 25.574 305 205 7 30 326 304 594 6.18e-13 71.2
Msa0876800 AT1G09820.1 21.898 411 273 11 34 424 212 594 6.26e-13 71.2
Msa0876800 AT3G49730.1 24.176 182 132 2 38 218 229 405 6.67e-13 71.2
Msa0876800 AT2G16880.1 26.241 141 104 0 48 188 243 383 8.71e-13 70.9
Msa0876800 AT2G17140.1 23.978 367 248 9 44 406 325 664 9.57e-13 70.9
Msa0876800 AT2G17140.2 23.978 367 248 9 44 406 325 664 9.57e-13 70.9
Msa0876800 AT5G01110.1 19.410 407 292 7 39 415 194 594 1.91e-12 69.7
Msa0876800 AT5G39710.1 22.591 301 219 5 44 340 274 564 2.14e-12 69.7
Msa0876800 AT5G39710.1 20.958 334 226 6 41 340 165 494 2.64e-11 66.2
Msa0876800 AT5G01110.2 19.410 407 292 7 39 415 222 622 2.57e-12 69.3
Msa0876800 AT4G16390.1 27.500 160 115 1 34 192 304 463 2.77e-12 69.3
Msa0876800 AT1G63400.1 21.851 389 283 7 33 416 108 480 3.69e-12 68.9
Msa0876800 AT1G06580.3 22.807 285 214 3 42 326 5 283 5.43e-12 67.8
Msa0876800 AT1G06580.3 23.824 319 229 8 27 340 58 367 7.97e-11 63.9
Msa0876800 AT1G06580.2 22.807 285 214 3 42 326 5 283 5.43e-12 67.8
Msa0876800 AT1G06580.2 23.824 319 229 8 27 340 58 367 7.97e-11 63.9
Msa0876800 AT1G62720.1 21.562 320 207 4 44 363 103 378 5.57e-12 68.2
Msa0876800 AT4G19440.4 27.703 148 101 2 48 192 556 700 5.90e-12 68.6
Msa0876800 AT4G19440.2 27.703 148 101 2 48 192 556 700 5.90e-12 68.6
Msa0876800 AT4G19440.3 27.703 148 101 2 48 192 556 700 5.90e-12 68.6
Msa0876800 AT4G19440.1 27.703 148 101 2 48 192 556 700 5.90e-12 68.6
Msa0876800 AT1G06580.1 22.807 285 214 3 42 326 111 389 8.63e-12 67.4
Msa0876800 AT5G46680.1 24.615 260 179 8 44 297 82 330 1.01e-11 67.0
Msa0876800 AT1G63230.1 23.464 179 135 1 39 217 140 316 1.46e-11 65.9
Msa0876800 AT1G62680.1 22.491 289 198 7 48 325 123 396 1.62e-11 66.6
Msa0876800 AT1G62680.2 22.491 289 198 7 48 325 123 396 1.62e-11 66.6
Msa0876800 AT1G05670.1 26.087 161 119 0 35 195 376 536 1.82e-11 66.6
Msa0876800 AT1G05670.2 26.087 161 119 0 35 195 376 536 1.82e-11 66.6
Msa0876800 AT1G05670.3 26.087 161 119 0 35 195 376 536 1.82e-11 66.6
Msa0876800 AT5G65560.1 24.483 290 183 8 67 324 275 560 1.92e-11 67.0
Msa0876800 AT5G65560.2 24.483 290 183 8 67 324 275 560 1.92e-11 67.0
Msa0876800 AT5G65560.3 24.483 290 183 8 67 324 275 560 1.92e-11 67.0
Msa0876800 AT5G65820.1 26.389 144 101 1 75 218 282 420 2.47e-11 66.2
Msa0876800 AT5G15010.1 27.273 143 99 2 44 185 372 510 2.53e-11 66.2
Msa0876800 AT3G16890.2 22.381 210 147 2 35 228 321 530 2.87e-11 65.9
Msa0876800 AT3G16890.1 22.381 210 147 2 35 228 450 659 3.00e-11 65.9
Msa0876800 AT5G41170.3 21.233 292 189 3 49 340 11 261 3.02e-11 65.5
Msa0876800 AT5G04810.1 25.974 154 108 1 34 181 718 871 3.08e-11 66.2
Msa0876800 AT3G48810.1 23.123 333 206 11 35 327 271 593 3.37e-11 65.9
Msa0876800 AT3G60050.2 27.564 156 113 0 40 195 214 369 3.78e-11 65.5
Msa0876800 AT3G60050.1 27.564 156 113 0 40 195 214 369 3.78e-11 65.5
Msa0876800 AT5G41170.2 20.890 292 190 2 49 340 111 361 4.61e-11 65.1
Msa0876800 AT5G41170.1 20.890 292 190 2 49 340 111 361 4.64e-11 65.1
Msa0876800 AT1G63130.1 21.192 302 228 4 41 340 147 440 4.95e-11 65.5
Msa0876800 AT1G63130.2 21.192 302 228 4 41 340 147 440 4.95e-11 65.5
Msa0876800 AT1G62670.2 21.122 303 227 5 41 340 147 440 6.51e-11 65.1
Msa0876800 AT1G62670.1 21.122 303 227 5 41 340 147 440 6.51e-11 65.1
Msa0876800 AT2G15630.1 26.515 132 97 0 67 198 419 550 7.02e-11 64.7
Msa0876800 AT1G79490.1 25.455 165 123 0 34 198 337 501 7.03e-11 65.1

Find 112 sgRNAs with CRISPR-Local

Find 663 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTCACTTCCACGGGTTTC+GGG 0.130446 6_1:+15186063 Msa0876800:CDS
CAGGAGCTCACTTCCCATTT+TGG 0.146501 6_1:-15196011 None:intergenic
AAATTTCTTCATTCTCTCTT+AGG 0.223369 6_1:+15185917 Msa0876800:CDS
TGGGTCACTTCCACGGGTTT+CGG 0.225661 6_1:+15186062 Msa0876800:CDS
TTTGAGGACTTTCTAGCTTT+AGG 0.243264 6_1:+15194965 Msa0876800:CDS
TTGAGGACTTTCTAGCTTTA+GGG 0.266162 6_1:+15194966 Msa0876800:CDS
TGCATGACAATATAGATATC+AGG 0.270813 6_1:-15192234 None:intergenic
TCAGGAATACAACACTGTTT+TGG 0.277702 6_1:+15186146 Msa0876800:CDS
CAGATGTAGGTTTGTACATT+TGG 0.278420 6_1:-15189588 None:intergenic
AATCAACGGTCGATAATAAA+AGG 0.287201 6_1:-15197120 None:intergenic
GCATCGAAATCATCAGTAAA+AGG 0.287772 6_1:-15190067 None:intergenic
TGATATGACTGCAGCTGGTC+TGG 0.305313 6_1:+15189991 Msa0876800:CDS
TGACATTCATTCCAAGTCTA+AGG 0.318762 6_1:+15197068 Msa0876800:three_prime_UTR
GAACTCTGATCAGGCTGTTC+AGG 0.318795 6_1:+15189421 Msa0876800:CDS
GCATGATGCTTTCTTCTTCA+AGG 0.330861 6_1:+15188742 Msa0876800:CDS
TTAAATAAGTTCTGCTATGC+TGG 0.341477 6_1:+15190016 Msa0876800:CDS
GCAAATTTCTATAGATATAC+TGG 0.342216 6_1:+15195866 Msa0876800:CDS
CCCATTTCGCACTGCTAAAC+GGG 0.344141 6_1:-15186043 None:intergenic
GAAATCTGTTAGCTGTTGAT+AGG 0.346557 6_1:+15196969 Msa0876800:three_prime_UTR
ATACTAATGCTAACTACATA+TGG 0.360715 6_1:+15196176 Msa0876800:CDS
ATATTGTCATGCAAGTAATT+AGG 0.361423 6_1:+15192244 Msa0876800:CDS
GGGAAGTGAGCTCCTGATTA+TGG 0.363803 6_1:+15196018 Msa0876800:CDS
TAACAGATTTCATAACAAAA+AGG 0.370037 6_1:-15196957 None:intergenic
CCAAATGAAAATCATGGGTT+TGG 0.377536 6_1:+15188766 Msa0876800:CDS
CTCCTGTTATACTCTTCTGC+TGG 0.379633 6_1:-15186105 None:intergenic
CACTCGGTCTATGCGTCCTT+GGG 0.383140 6_1:-15189631 None:intergenic
TACATTTGGCTTTACTTCCA+TGG 0.387492 6_1:-15189574 None:intergenic
TTTCACCAGCAGCCATAATC+AGG 0.387899 6_1:-15196030 None:intergenic
ACACTCGGTCTATGCGTCCT+TGG 0.391054 6_1:-15189632 None:intergenic
ACCCATTTCGCACTGCTAAA+CGG 0.391566 6_1:-15186044 None:intergenic
TTCCAGCAGAAGAGTATAAC+AGG 0.396050 6_1:+15186103 Msa0876800:CDS
ACCCGTTTAGCAGTGCGAAA+TGG 0.400081 6_1:+15186042 Msa0876800:CDS
CAACGGCAGAATACGTTACT+AGG 0.406550 6_1:+15190288 Msa0876800:CDS
CCCGTTTAGCAGTGCGAAAT+GGG 0.407153 6_1:+15186043 Msa0876800:CDS
TATGAAGATATGATGCTTGA+TGG 0.425865 6_1:+15188656 Msa0876800:CDS
CAAGGACCAAATGAAAATCA+TGG 0.433875 6_1:+15188760 Msa0876800:CDS
CGCGGATTTCAAGAATGTTA+AGG 0.435436 6_1:+15190367 Msa0876800:CDS
GCGAAATGGGTCACTTCCAC+GGG 0.441296 6_1:+15186056 Msa0876800:CDS
CGGCAGCATTAAATGCAGTA+TGG 0.450939 6_1:-15190346 None:intergenic
CTGCTGGAACGTTGTAGAAT+CGG 0.452113 6_1:-15186089 None:intergenic
GATATGACTGCAGCTGGTCT+GGG 0.462476 6_1:+15189992 Msa0876800:CDS
TGAGTAACCAACATGAGTCT+TGG 0.472349 6_1:-15196874 None:intergenic
GGATGCACTTCTTGAAATGC+TGG 0.478829 6_1:+15192194 Msa0876800:CDS
CACCATCACATTCTCAGCAT+TGG 0.479555 6_1:-15190234 None:intergenic
CGGTCGATAATAAAAGGAAC+TGG 0.490568 6_1:-15197114 None:intergenic
ACTTCTTGAAATGCTGGAAA+AGG 0.494222 6_1:+15192200 Msa0876800:CDS
GGCGTGGAGGATTCTTGAAT+AGG 0.502247 6_1:+15190309 Msa0876800:CDS
AATTCTTGGTAACCAACTCA+TGG 0.504360 6_1:-15197015 None:intergenic
AACTTTCTAATTTCAACCTG+TGG 0.505817 6_1:+15189389 Msa0876800:CDS
GAAATGCAAGAACTCTGATC+AGG 0.506823 6_1:+15189412 Msa0876800:CDS
GACTTTCTAGCTTTAGGGAA+GGG 0.507488 6_1:+15194971 Msa0876800:CDS
TGCAGTATGGTATGCAACAA+AGG 0.508294 6_1:-15190333 None:intergenic
TGACTGCAGACGCTTGCAGA+GGG 0.508918 6_1:+15195813 Msa0876800:intron
GATTATGGCTGCTGGTGAAA+AGG 0.512069 6_1:+15196033 Msa0876800:CDS
ACTGCAGACGCTTGCAGAGG+GGG 0.512879 6_1:+15195815 Msa0876800:intron
CAAGGGAATGAAAAGTTTCA+CGG 0.514406 6_1:-15188691 None:intergenic
TGCGAAATGGGTCACTTCCA+CGG 0.520994 6_1:+15186055 Msa0876800:CDS
TGCAGTTGAAGCATACTACC+AGG 0.521493 6_1:+15196237 Msa0876800:CDS
TACTAATGCTAACTACATAT+GGG 0.522217 6_1:+15196177 Msa0876800:CDS
AAGACCACGGTCAATCTCTC+CGG 0.522416 6_1:-15194936 None:intergenic
ATGGTTGGCTACACTGAGAA+AGG 0.530317 6_1:+15195840 Msa0876800:CDS
TAAATAAGTTCTGCTATGCT+GGG 0.534812 6_1:+15190017 Msa0876800:CDS
GTCCGTGATATGACTGCAGC+TGG 0.535410 6_1:+15189986 Msa0876800:CDS
AAGGACCAAATGAAAATCAT+GGG 0.535637 6_1:+15188761 Msa0876800:CDS
TGCAGGTGCTATTGTCATGC+CGG 0.537597 6_1:+15194917 Msa0876800:intron
AGAGTTCTTGCATTTCCCAC+AGG 0.538323 6_1:-15189405 None:intergenic
GCAGTATGGTATGCAACAAA+GGG 0.538769 6_1:-15190332 None:intergenic
GCATGACAATATAGATATCA+GGG 0.542739 6_1:-15192233 None:intergenic
TTTGGAGGAGATGAAATCCA+TGG 0.546073 6_1:+15189557 Msa0876800:CDS
CTAGTAACGTATTCTGCCGT+TGG 0.551607 6_1:-15190287 None:intergenic
ACTTTCTAATTTCAACCTGT+GGG 0.553816 6_1:+15189390 Msa0876800:CDS
ATGCATTCTAGAGCCTCTCA+TGG 0.555834 6_1:-15188723 None:intergenic
AAGAAGAAACAAAACGCAAA+GGG 0.559080 6_1:+15185821 None:intergenic
AATGAGATACACCTTAGACT+TGG 0.563267 6_1:-15197079 None:intergenic
GAATGAAAAGTTTCACGGGT+TGG 0.567753 6_1:-15188686 None:intergenic
GGTCACTTCCACGGGTTTCG+GGG 0.571682 6_1:+15186064 Msa0876800:CDS
AAGGGAATGAAAAGTTTCAC+GGG 0.575462 6_1:-15188690 None:intergenic
GAGCTCCTGATTATGGCTGC+TGG 0.578547 6_1:+15196025 Msa0876800:CDS
TACTGCATTTAATGCTGCCG+CGG 0.581590 6_1:+15190349 Msa0876800:CDS
TAAGAAGAAACAAAACGCAA+AGG 0.584729 6_1:+15185820 None:intergenic
AGATGATCCAAGACTCATGT+TGG 0.589164 6_1:+15196867 Msa0876800:CDS
ATGTTCTAAATCTCGAGCGA+AGG 0.591286 6_1:-15196909 None:intergenic
ATGAGTCTTGGATCATCTTG+AGG 0.593442 6_1:-15196862 None:intergenic
CAATGCTGAGAATGTGATGG+TGG 0.593534 6_1:+15190235 Msa0876800:CDS
ATGTGGAGAGGTCAAAGCAA+TGG 0.595505 6_1:+15190189 Msa0876800:CDS
CTTCAACTGCAGCTAACGAA+GGG 0.596213 6_1:-15196225 None:intergenic
GCAGAATACGTTACTAGGCG+TGG 0.606407 6_1:+15190293 Msa0876800:CDS
CTACATGCATGTGCAGCCCA+AGG 0.607018 6_1:+15189615 Msa0876800:CDS
GCTTCAACTGCAGCTAACGA+AGG 0.607314 6_1:-15196226 None:intergenic
GACCAGCTGCAGTCATATCA+CGG 0.607414 6_1:-15189988 None:intergenic
CTCTCATGGATCCTACAGCA+AGG 0.615480 6_1:-15188709 None:intergenic
GGACTTTCTAGCTTTAGGGA+AGG 0.623013 6_1:+15194970 Msa0876800:CDS
TGCATGTAGCAAGCAGATGT+AGG 0.624370 6_1:-15189601 None:intergenic
TCTCATGGATCCTACAGCAA+GGG 0.630566 6_1:-15188708 None:intergenic
AATAACTCACTTTCAAACCC+TGG 0.633843 6_1:-15196255 None:intergenic
AATCGGAGCCCCGAAACCCG+TGG 0.634595 6_1:-15186072 None:intergenic
CTTAACATTCTTGAAATCCG+CGG 0.637553 6_1:-15190366 None:intergenic
CATGACAATATAGATATCAG+GGG 0.638180 6_1:-15192232 None:intergenic
CTTGCTGTAGGATCCATGAG+AGG 0.647416 6_1:+15188710 Msa0876800:CDS
GACTGCAGACGCTTGCAGAG+GGG 0.655013 6_1:+15195814 Msa0876800:intron
GATGGTGGGTGTTACTGATG+AGG 0.655231 6_1:+15190250 Msa0876800:CDS
ATGACTGCAGACGCTTGCAG+AGG 0.659637 6_1:+15195812 Msa0876800:intron
TAGACTTGGAATGAATGTCA+AGG 0.666068 6_1:-15197065 None:intergenic
GCAGTTGAAGCATACTACCA+GGG 0.677884 6_1:+15196238 Msa0876800:CDS
CGCCAATGCTGAGAATGTGA+TGG 0.682386 6_1:+15190232 Msa0876800:CDS
TAATGCTGCAGAAATTTATG+TGG 0.684727 6_1:+15194994 Msa0876800:CDS
GTTCTCTCAATGCTCAACGA+AGG 0.689538 6_1:+15186169 Msa0876800:CDS
ATATGATGCTTGATGGAGTG+AGG 0.694446 6_1:+15188663 Msa0876800:CDS
GGAGTTATATAACTTACCAA+CGG 0.695293 6_1:+15190271 Msa0876800:CDS
AATGCTGAGAATGTGATGGT+GGG 0.697576 6_1:+15190236 Msa0876800:CDS
AGGTTATTGAGTATGTGGAG+AGG 0.702509 6_1:+15190177 Msa0876800:intron
CATGCCGGAGAGATTGACCG+TGG 0.731385 6_1:+15194932 Msa0876800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAATAATTATATTTT+TGG + chr6_1:15188597-15188616 Msa0876800:intron 0.0%
!!! TTTAAAATAATTATATTTTT+GGG + chr6_1:15188598-15188617 Msa0876800:intron 0.0%
!!! TGAAAAATATCATTTTTTTT+TGG + chr6_1:15186431-15186450 Msa0876800:intron 10.0%
!!! TGAATTTTTAACTTATTTAA+TGG + chr6_1:15186836-15186855 Msa0876800:intron 10.0%
!! AAAACAAAATCATAAAAAAA+TGG - chr6_1:15189730-15189749 None:intergenic 10.0%
!! TGAAAAATAAAAACATATAA+AGG - chr6_1:15189925-15189944 None:intergenic 10.0%
!! AAATATACAATATTATTAAC+CGG - chr6_1:15190795-15190814 None:intergenic 10.0%
!!! ATTCATTTAATTTTTTTTAC+TGG - chr6_1:15190981-15191000 None:intergenic 10.0%
!!! TAAATTAGTCATCTTTTTTT+AGG + chr6_1:15186650-15186669 Msa0876800:intron 15.0%
!!! TCTTTTTTTAGGATAATTTT+AGG + chr6_1:15186661-15186680 Msa0876800:intron 15.0%
!!! CTTTTTTTAGGATAATTTTA+GGG + chr6_1:15186662-15186681 Msa0876800:intron 15.0%
!!! ATCTATGTTTGATATTTTTA+AGG + chr6_1:15186706-15186725 Msa0876800:intron 15.0%
!!! TCTATGTTTGATATTTTTAA+GGG + chr6_1:15186707-15186726 Msa0876800:intron 15.0%
!! AGAGTTTAAAAATATCAATT+TGG + chr6_1:15187378-15187397 Msa0876800:intron 15.0%
!!! ATCATTTTTAAGATGATTTT+AGG + chr6_1:15187430-15187449 Msa0876800:intron 15.0%
!!! TCATTTTTAAGATGATTTTA+GGG + chr6_1:15187431-15187450 Msa0876800:intron 15.0%
!!! ATTAAGTTGAATTTATTTAC+TGG + chr6_1:15187909-15187928 Msa0876800:intron 15.0%
!! AAAAAAAGATCTAAATTTGT+TGG + chr6_1:15188029-15188048 Msa0876800:intron 15.0%
!! AAAAAAAGATCTAAATTTGT+TGG + chr6_1:15188029-15188048 Msa0876800:intron 15.0%
!!! TTATATTTTTGGGTTTTATT+TGG + chr6_1:15188608-15188627 Msa0876800:intron 15.0%
!! TTCCAAAAAAAATAAAAACT+GGG + chr6_1:15188973-15188992 Msa0876800:intron 15.0%
!! TTAATAAAAAAATGACCTAA+AGG + chr6_1:15189697-15189716 Msa0876800:intron 15.0%
!! TTTAGTAGAAAAAAAAATAG+TGG - chr6_1:15189802-15189821 None:intergenic 15.0%
!! ATTATTTAAATTAATGATCC+AGG + chr6_1:15189954-15189973 Msa0876800:intron 15.0%
!!! AATTTTAAATCAAATAATCC+CGG - chr6_1:15191682-15191701 None:intergenic 15.0%
!! ATAAACAAATCTACAAAAAT+GGG - chr6_1:15191743-15191762 None:intergenic 15.0%
!! TATAAACAAATCTACAAAAA+TGG - chr6_1:15191744-15191763 None:intergenic 15.0%
!! ATTTGTTTATATATCAAATG+CGG + chr6_1:15191753-15191772 Msa0876800:intron 15.0%
!!! TTATATTTCTGATATTGATT+TGG + chr6_1:15191919-15191938 Msa0876800:intron 15.0%
!!! GAAATATAAAGCTTTTTTTA+AGG - chr6_1:15192028-15192047 None:intergenic 15.0%
!!! TAAAAAAAGCTTTATATTTC+TGG + chr6_1:15192028-15192047 Msa0876800:intron 15.0%
!!! AAAAATCTTTTAAAGTTCAT+CGG + chr6_1:15192521-15192540 Msa0876800:intron 15.0%
!! TAATGATCCATTAAATTATT+TGG - chr6_1:15192786-15192805 None:intergenic 15.0%
!! ACTTTCATTCAATTTAATAA+TGG - chr6_1:15193769-15193788 None:intergenic 15.0%
!! ATAAGTTAACTAAAAGATAT+TGG - chr6_1:15193810-15193829 None:intergenic 15.0%
!! GAATTCATTAATCAAATTTA+TGG + chr6_1:15193989-15194008 Msa0876800:intron 15.0%
!!! TTTAATTTTGCTTCAAAAAA+AGG + chr6_1:15195525-15195544 Msa0876800:intron 15.0%
!!! ATTGATCTTTTATTTTCATT+GGG + chr6_1:15196359-15196378 Msa0876800:intron 15.0%
!!! TCAAGTACTAAAATTTATTT+TGG + chr6_1:15196439-15196458 Msa0876800:intron 15.0%
!!! TTAATTTTAAAGTGAGTTTA+AGG - chr6_1:15196598-15196617 None:intergenic 15.0%
!! TTTATTAATCAATCTACTAA+GGG - chr6_1:15196736-15196755 None:intergenic 15.0%
!!! TTTTATTAATCAATCTACTA+AGG - chr6_1:15196737-15196756 None:intergenic 15.0%
!! TAGTAGATTGATTAATAAAA+AGG + chr6_1:15196737-15196756 Msa0876800:intron 15.0%
!!! TTTTTTTGGTGTTAACTTTT+CGG + chr6_1:15186445-15186464 Msa0876800:intron 20.0%
!! CGAAAACAAAAATATCAATA+TGG - chr6_1:15186733-15186752 None:intergenic 20.0%
!! ATTTCGTAATTTGAGTATTT+AGG + chr6_1:15186792-15186811 Msa0876800:intron 20.0%
!!! TTGAGTATTTAGGATATATT+AGG + chr6_1:15186802-15186821 Msa0876800:intron 20.0%
!! AAATCAAATGTAGATATTGT+AGG + chr6_1:15186984-15187003 Msa0876800:intron 20.0%
!! AAATAAACTGAAAAATAGCT+TGG - chr6_1:15187118-15187137 None:intergenic 20.0%
!! AGTATACATAAGTACTTAAA+TGG + chr6_1:15187312-15187331 Msa0876800:intron 20.0%
!! ATTCATATTTGACATTCTTA+AGG + chr6_1:15187475-15187494 Msa0876800:intron 20.0%
!!! ATAGTTTGACTTTATTTAGT+AGG + chr6_1:15187737-15187756 Msa0876800:intron 20.0%
!!! AATTGATATTTTCAATTCTG+AGG + chr6_1:15187833-15187852 Msa0876800:intron 20.0%
!!! AGGACTAATTTTAGTTTTTA+GGG + chr6_1:15187877-15187896 Msa0876800:intron 20.0%
!! TTCAAGAGAATTTATCAAAA+CGG + chr6_1:15187959-15187978 Msa0876800:intron 20.0%
!! TTCAAGAGAATTTATCAAAA+CGG + chr6_1:15187959-15187978 Msa0876800:intron 20.0%
!! ATGAAATCATGAAAATCAAA+CGG + chr6_1:15188390-15188409 Msa0876800:intron 20.0%
!!! TTTAAAACAATTGACAAATG+AGG - chr6_1:15188584-15188603 None:intergenic 20.0%
!! CTTCCAAAAAAAATAAAAAC+TGG + chr6_1:15188972-15188991 Msa0876800:intron 20.0%
!!! AACCCAGTTTTTATTTTTTT+TGG - chr6_1:15188978-15188997 None:intergenic 20.0%
!! TTGAAAATTGAAATTTCAGT+TGG + chr6_1:15189000-15189019 Msa0876800:intron 20.0%
!!! AGACTTTGTATTTTATAATG+TGG + chr6_1:15189166-15189185 Msa0876800:intron 20.0%
!! ACAACATAAAAAAAAAGAGA+AGG - chr6_1:15189874-15189893 None:intergenic 20.0%
!!! CTGTTCATGATATTTTTAAA+TGG + chr6_1:15190413-15190432 Msa0876800:intron 20.0%
!!! TGATATTTTTAAATGGTTCT+TGG + chr6_1:15190420-15190439 Msa0876800:intron 20.0%
!! AGTGTAATCATAATCATAAT+AGG - chr6_1:15190949-15190968 None:intergenic 20.0%
!! ATGACAGTGATATAAATTAA+AGG + chr6_1:15190999-15191018 Msa0876800:intron 20.0%
!!! TTAGACTTCCTATTTTATTT+GGG + chr6_1:15191161-15191180 Msa0876800:intron 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG - chr6_1:15191245-15191264 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr6_1:15191318-15191337 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr6_1:15191359-15191378 Msa0876800:intron 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr6_1:15191360-15191379 Msa0876800:intron 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr6_1:15191361-15191380 Msa0876800:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + chr6_1:15191443-15191462 Msa0876800:intron 20.0%
!! TGAATCACATCTAATTAAAA+AGG + chr6_1:15191619-15191638 Msa0876800:intron 20.0%
!! GAATCACATCTAATTAAAAA+GGG + chr6_1:15191620-15191639 Msa0876800:intron 20.0%
!! CAGAAATATAAAGCTATTAT+AGG - chr6_1:15191910-15191929 None:intergenic 20.0%
!! ATAACAATAAAAAACTGAAC+AGG - chr6_1:15192094-15192113 None:intergenic 20.0%
!!! CGTTAATATCTTTTCTTTTT+TGG + chr6_1:15192117-15192136 Msa0876800:intron 20.0%
!!! ATCGTCTTTTAAAATTTGTA+TGG + chr6_1:15192146-15192165 Msa0876800:intron 20.0%
!!! GATGAACTTTAAAAGATTTT+TGG - chr6_1:15192522-15192541 None:intergenic 20.0%
!! ATTTGGATCATACATAAATT+TGG - chr6_1:15192769-15192788 None:intergenic 20.0%
!! GTATGATCCAAATAATTTAA+TGG + chr6_1:15192776-15192795 Msa0876800:intron 20.0%
!! CATTATGAATTTCAACTAAT+AGG + chr6_1:15192801-15192820 Msa0876800:intron 20.0%
!! GTAAAAACTAATACATACAT+AGG + chr6_1:15192974-15192993 Msa0876800:intron 20.0%
!!! GATATCAATACCTAATTTTT+AGG - chr6_1:15193198-15193217 None:intergenic 20.0%
!!! AAGGGATTTTTTTTTCAAAA+GGG - chr6_1:15193513-15193532 None:intergenic 20.0%
!!! AAAGGGATTTTTTTTTCAAA+AGG - chr6_1:15193514-15193533 None:intergenic 20.0%
!! TTTAATAATGGTAAAATAGC+TGG - chr6_1:15193757-15193776 None:intergenic 20.0%
!! AAAAGCAATATTATGCATTT+AGG - chr6_1:15193962-15193981 None:intergenic 20.0%
!! AATTGCATATAGAATGTATA+AGG + chr6_1:15194438-15194457 Msa0876800:intron 20.0%
!! TTCATAGTTGTAATCATATT+AGG + chr6_1:15194486-15194505 Msa0876800:intron 20.0%
!!! TTCATTAATACTGATAATGT+AGG - chr6_1:15194539-15194558 None:intergenic 20.0%
!!! GTTTACAATTTCAACTTTTT+TGG + chr6_1:15194794-15194813 Msa0876800:intron 20.0%
!!! TTTAAAATTCACACACATAT+GGG - chr6_1:15195344-15195363 None:intergenic 20.0%
!!! TTTTAAAATTCACACACATA+TGG - chr6_1:15195345-15195364 None:intergenic 20.0%
!! CTGAAAATAAAATGAAAACA+AGG + chr6_1:15195488-15195507 Msa0876800:intron 20.0%
!!! TTGTCAAGTTGAAATTAATT+TGG + chr6_1:15195916-15195935 Msa0876800:intron 20.0%
!!! TTTTTCATGAATTCCAAAAT+GGG + chr6_1:15195998-15196017 Msa0876800:CDS 20.0%
!!! TTGTTTTTTAATTCATAGAC+TGG + chr6_1:15196148-15196167 Msa0876800:intron 20.0%
!!! CATTGATCTTTTATTTTCAT+TGG + chr6_1:15196358-15196377 Msa0876800:intron 20.0%
!!! TTGATCTTTTATTTTCATTG+GGG + chr6_1:15196360-15196379 Msa0876800:intron 20.0%
!!! ATTTATTTTGGTATGTTAGT+AGG + chr6_1:15196451-15196470 Msa0876800:intron 20.0%
!!! TTTATTTTGGTATGTTAGTA+GGG + chr6_1:15196452-15196471 Msa0876800:intron 20.0%
!! TTAAGTGTAAAAATCATGTT+TGG - chr6_1:15196522-15196541 None:intergenic 20.0%
!! AAGGTAAAATGATTTATGTT+TGG - chr6_1:15196579-15196598 None:intergenic 20.0%
!!! TCAATTTTCATCCATTATTT+AGG + chr6_1:15196667-15196686 Msa0876800:intron 20.0%
!! TAACAGATTTCATAACAAAA+AGG - chr6_1:15196960-15196979 None:intergenic 20.0%
!! TGAATCAAGTAAAAAATTCT+TGG - chr6_1:15197032-15197051 None:intergenic 20.0%
! AAATTTCTTCATTCTCTCTT+AGG + chr6_1:15185917-15185936 Msa0876800:CDS 25.0%
!!! AATGTGAGATTCTGAAATTA+GGG - chr6_1:15186002-15186021 None:intergenic 25.0%
!!! AAATGTGAGATTCTGAAATT+AGG - chr6_1:15186003-15186022 None:intergenic 25.0%
!!! TCACATTTTTTCATTTTTGC+AGG + chr6_1:15186015-15186034 Msa0876800:intron 25.0%
! TAATACGAAGTAATAAAGTG+TGG + chr6_1:15186489-15186508 Msa0876800:intron 25.0%
! TTACTGTGTAAAACAATTCT+TGG - chr6_1:15186515-15186534 None:intergenic 25.0%
!!! ATAATTTTAGGGATGTACTA+TGG + chr6_1:15186673-15186692 Msa0876800:intron 25.0%
! AAAAAACACTAAGATCTAGT+TGG - chr6_1:15186761-15186780 None:intergenic 25.0%
! TCCATAACAGTTTATGAAAA+TGG + chr6_1:15187148-15187167 Msa0876800:intron 25.0%
!! TCCATTTTCATAAACTGTTA+TGG - chr6_1:15187152-15187171 None:intergenic 25.0%
! GACAATGCATAAAATATGTA+AGG + chr6_1:15187207-15187226 Msa0876800:intron 25.0%
!! AGTTACTCCATTTTCATTTT+TGG - chr6_1:15187258-15187277 None:intergenic 25.0%
! ATATTTGACATTCTTAAGGA+CGG + chr6_1:15187479-15187498 Msa0876800:intron 25.0%
!! TTGTGTTTTCAAATAGATCT+TGG + chr6_1:15187517-15187536 Msa0876800:intron 25.0%
!!! ATAGATCTTGGTGTTTATTA+TGG + chr6_1:15187529-15187548 Msa0876800:intron 25.0%
! AGGACTAATTTGAGTATTTA+GGG + chr6_1:15187552-15187571 Msa0876800:intron 25.0%
!!! TTTTAGAGAACTTATGGAAA+CGG + chr6_1:15187627-15187646 Msa0876800:intron 25.0%
!!! CTTGTTTTCATAATCTTTTC+AGG + chr6_1:15187679-15187698 Msa0876800:intron 25.0%
!!! GAGGACTAATTTTAGTTTTT+AGG + chr6_1:15187876-15187895 Msa0876800:intron 25.0%
! AAATTCAACTTAATCCAAAC+AGG - chr6_1:15187903-15187922 None:intergenic 25.0%
! ACATTAATGAACTCATGTAA+GGG - chr6_1:15188278-15188297 None:intergenic 25.0%
! AACATTAATGAACTCATGTA+AGG - chr6_1:15188279-15188298 None:intergenic 25.0%
! ATTAGTTCATTAATGTTGTG+AGG + chr6_1:15188317-15188336 Msa0876800:intron 25.0%
!!! ACTAACTTTCATGCTTTTTA+AGG - chr6_1:15188429-15188448 None:intergenic 25.0%
!!! ATTTTTGGGTTTTATTTGGT+AGG + chr6_1:15188612-15188631 Msa0876800:intron 25.0%
! AATAAAATAGCACATACATC+AGG - chr6_1:15188794-15188813 None:intergenic 25.0%
! CTTAAAACAAAAAGTTGTAC+AGG - chr6_1:15188835-15188854 None:intergenic 25.0%
! GATGTTGTATGATTGAAAAA+TGG + chr6_1:15188897-15188916 Msa0876800:intron 25.0%
! TTAATATTCTACTGCATTAG+AGG + chr6_1:15189475-15189494 Msa0876800:intron 25.0%
!!! GTCCTTTAAAATGAAGATTT+TGG + chr6_1:15189539-15189558 Msa0876800:intron 25.0%
!! CTCCAAAATCTTCATTTTAA+AGG - chr6_1:15189544-15189563 None:intergenic 25.0%
!!! CTTTAAAATGAAGATTTTGG+AGG + chr6_1:15189542-15189561 Msa0876800:intron 25.0%
!!! ATTTTGTTTTTCGTCCAAAT+CGG + chr6_1:15189740-15189759 Msa0876800:intron 25.0%
! TAGATACTAAAAAACCGATT+TGG - chr6_1:15189757-15189776 None:intergenic 25.0%
! GTCAAATCAAGAAATAGATA+CGG - chr6_1:15190104-15190123 None:intergenic 25.0%
!!! ACTTGTTATTCTGTCAAAAA+AGG + chr6_1:15190157-15190176 Msa0876800:intron 25.0%
! AAAAAAGGTTATTGAGTATG+TGG + chr6_1:15190172-15190191 Msa0876800:intron 25.0%
! TTATGTGCGATATTTAAATC+TGG + chr6_1:15190727-15190746 Msa0876800:intron 25.0%
! AATTAAGATATCCACTTTAC+CGG + chr6_1:15190773-15190792 Msa0876800:intron 25.0%
! AATATTATTAACCGGTAAAG+TGG - chr6_1:15190787-15190806 None:intergenic 25.0%
!!! TTTATGCTTTCTAGTTTCTA+TGG + chr6_1:15191034-15191053 Msa0876800:intron 25.0%
!! CTTAGACTTCCTATTTTATT+TGG + chr6_1:15191160-15191179 Msa0876800:intron 25.0%
!!! TAGACTTCCTATTTTATTTG+GGG + chr6_1:15191162-15191181 Msa0876800:intron 25.0%
! TTATTAGCCCCAAATAAAAT+AGG - chr6_1:15191172-15191191 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr6_1:15191371-15191390 Msa0876800:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr6_1:15191407-15191426 Msa0876800:intron 25.0%
! TTGAAAAGGAGTTTACATTT+AGG + chr6_1:15191421-15191440 Msa0876800:intron 25.0%
! TGAAAAGGAGTTTACATTTA+GGG + chr6_1:15191422-15191441 Msa0876800:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG + chr6_1:15191442-15191461 Msa0876800:intron 25.0%
!!! TTTGTTTTTGTATTTCCTGA+AGG + chr6_1:15191505-15191524 Msa0876800:intron 25.0%
!!! TTGTTTTTGTATTTCCTGAA+GGG + chr6_1:15191506-15191525 Msa0876800:intron 25.0%
! TATAAGAAAAGAGCAATTTC+TGG + chr6_1:15191537-15191556 Msa0876800:intron 25.0%
!!! AGGAAATGTTTTTTTTTTCC+AGG - chr6_1:15191890-15191909 None:intergenic 25.0%
!!! TATTTCTGATATTGATTTGG+TGG + chr6_1:15191922-15191941 Msa0876800:intron 25.0%
! ATATTGTCATGCAAGTAATT+AGG + chr6_1:15192244-15192263 Msa0876800:CDS 25.0%
! TAAATATAGATTAACCAAGC+TGG + chr6_1:15192352-15192371 Msa0876800:intron 25.0%
!! AATTTTCTCTTGTCACTAAA+TGG - chr6_1:15192568-15192587 None:intergenic 25.0%
! AGTGACAAGAGAAAATTTAT+TGG + chr6_1:15192571-15192590 Msa0876800:intron 25.0%
! TATGAATTTCAACTAATAGG+AGG + chr6_1:15192804-15192823 Msa0876800:intron 25.0%
! ATGAATTTCAACTAATAGGA+GGG + chr6_1:15192805-15192824 Msa0876800:intron 25.0%
!! CTCCTCTTTTATCATAATAA+AGG + chr6_1:15192843-15192862 Msa0876800:intron 25.0%
! GTCCTTTATTATGATAAAAG+AGG - chr6_1:15192848-15192867 None:intergenic 25.0%
! TATCATAATAAAGGACAAGT+TGG + chr6_1:15192852-15192871 Msa0876800:intron 25.0%
! TACATACATAGGAGAAAATA+TGG + chr6_1:15192985-15193004 Msa0876800:intron 25.0%
! TGTTTAATAAGAGATAAGCA+AGG - chr6_1:15193078-15193097 None:intergenic 25.0%
!!! GAAGTTTCATTTTTTTTCTC+TGG - chr6_1:15193112-15193131 None:intergenic 25.0%
! AAATCTTCAAACTTCATTCT+AGG + chr6_1:15193318-15193337 Msa0876800:intron 25.0%
! ATAAATTTCTCTACAAGCTT+TGG + chr6_1:15193672-15193691 Msa0876800:intron 25.0%
!!! AGCTAGTTATTTTAAAAACC+AGG - chr6_1:15194029-15194048 None:intergenic 25.0%
! TAATAAACGAGTACAAAACA+CGG - chr6_1:15194068-15194087 None:intergenic 25.0%
!!! CTTTTTTTTTTGAGAACTCA+AGG + chr6_1:15194207-15194226 Msa0876800:intron 25.0%
! AAAGACTCATGAAAAACATT+TGG - chr6_1:15194467-15194486 None:intergenic 25.0%
!!! TCAGTATTAATGAAAGCATT+AGG + chr6_1:15194545-15194564 Msa0876800:intron 25.0%
! GACTATGAACTATTTGTAAA+AGG + chr6_1:15194716-15194735 Msa0876800:intron 25.0%
! ATAATTGTAACCATCAAACT+TGG + chr6_1:15194740-15194759 Msa0876800:intron 25.0%
! ACAAATAAGTATATCCAAAC+AGG - chr6_1:15195119-15195138 None:intergenic 25.0%
!! TTCTAAAAAAAGGCATACAT+AGG - chr6_1:15195313-15195332 None:intergenic 25.0%
! GTAGCTATGAAAATAGAAAA+TGG - chr6_1:15195420-15195439 None:intergenic 25.0%
! CAAAAATAGTAAAAACAGCA+TGG - chr6_1:15195450-15195469 None:intergenic 25.0%
!!! CATGCTGTTTTTACTATTTT+TGG + chr6_1:15195448-15195467 Msa0876800:intron 25.0%
! GCAAATTTCTATAGATATAC+TGG + chr6_1:15195866-15195885 Msa0876800:CDS 25.0%
! ATTTCTATAGATATACTGGT+AGG + chr6_1:15195870-15195889 Msa0876800:intron 25.0%
!!! CTTTTTCATGAATTCCAAAA+TGG + chr6_1:15195997-15196016 Msa0876800:CDS 25.0%
! ATATGAAACACATAACAAGA+GGG - chr6_1:15196082-15196101 None:intergenic 25.0%
!!! TTTTTTAATTCATAGACTGG+AGG + chr6_1:15196151-15196170 Msa0876800:intron 25.0%
! ATACTAATGCTAACTACATA+TGG + chr6_1:15196176-15196195 Msa0876800:CDS 25.0%
! TACTAATGCTAACTACATAT+GGG + chr6_1:15196177-15196196 Msa0876800:CDS 25.0%
!!! TGATCTTTTATTTTCATTGG+GGG + chr6_1:15196361-15196380 Msa0876800:intron 25.0%
!!! TAGTACTTGATAATCACTTT+TGG - chr6_1:15196429-15196448 None:intergenic 25.0%
! TGTAAAAATCATGTTTGGTT+TGG - chr6_1:15196517-15196536 None:intergenic 25.0%
!! AACATAGTTTGTGTTTAGTT+TGG - chr6_1:15196648-15196667 None:intergenic 25.0%
! TACATGTTGAACCTAAATAA+TGG - chr6_1:15196681-15196700 None:intergenic 25.0%
! TAATCTAGCTATCTTACAAT+TGG + chr6_1:15196785-15196804 Msa0876800:intron 25.0%
! AAGGTGTATCTCATTAAAAA+CGG + chr6_1:15197087-15197106 Msa0876800:three_prime_UTR 25.0%
AAGAAGAAGAAGAAGAAAGA+GGG - chr6_1:15185948-15185967 None:intergenic 30.0%
AAACTACGCTAAAAATGTTC+AGG + chr6_1:15186128-15186147 Msa0876800:CDS 30.0%
CTTTATTACTTCGTATTACC+AGG - chr6_1:15186487-15186506 None:intergenic 30.0%
!! CGTTTTTCAACTAAGCAATT+GGG - chr6_1:15186597-15186616 None:intergenic 30.0%
!! ACGTTTTTCAACTAAGCAAT+TGG - chr6_1:15186598-15186617 None:intergenic 30.0%
!!! CTAGATCTTAGTGTTTTTTG+TGG + chr6_1:15186762-15186781 Msa0876800:intron 30.0%
TGCATAAAATATGTAAGGTC+CGG + chr6_1:15187212-15187231 Msa0876800:intron 30.0%
!!! TCCATTTTCATTTTTGGTAG+TGG - chr6_1:15187252-15187271 None:intergenic 30.0%
TTAAGCTGTTTATCCAAACA+AGG + chr6_1:15187346-15187365 Msa0876800:intron 30.0%
GAGGACTAATTTGAGTATTT+AGG + chr6_1:15187551-15187570 Msa0876800:intron 30.0%
!! CGACTATTTTAGAGAACTTA+TGG + chr6_1:15187621-15187640 Msa0876800:intron 30.0%
! ACTCACGTTTTATATTCTCA+AGG + chr6_1:15187806-15187825 Msa0876800:intron 30.0%
!! GGACCAAATAGTGTTTTTAT+TGG + chr6_1:15187854-15187873 Msa0876800:intron 30.0%
CCTCCAATAAAAACACTATT+TGG - chr6_1:15187860-15187879 None:intergenic 30.0%
!! CCAAATAGTGTTTTTATTGG+AGG + chr6_1:15187857-15187876 Msa0876800:intron 30.0%
! TGAATAGTCTCAAGTGTTTT+TGG - chr6_1:15188106-15188125 None:intergenic 30.0%
AGGAGATGACCATAATAATT+AGG + chr6_1:15188337-15188356 Msa0876800:intron 30.0%
GGAGATGACCATAATAATTA+GGG + chr6_1:15188338-15188357 Msa0876800:intron 30.0%
GAGATGACCATAATAATTAG+GGG + chr6_1:15188339-15188358 Msa0876800:intron 30.0%
!! ACTTTCATGCTTTTTAAGGA+TGG - chr6_1:15188425-15188444 None:intergenic 30.0%
ACTAAGTTGTTTATCCAAAC+AGG + chr6_1:15188496-15188515 Msa0876800:intron 30.0%
CTAAGTTGTTTATCCAAACA+GGG + chr6_1:15188497-15188516 Msa0876800:intron 30.0%
TATGAAGATATGATGCTTGA+TGG + chr6_1:15188656-15188675 Msa0876800:CDS 30.0%
AAGGACCAAATGAAAATCAT+GGG + chr6_1:15188761-15188780 Msa0876800:CDS 30.0%
GGAATCTTGGAAAGATTATA+TGG - chr6_1:15189072-15189091 None:intergenic 30.0%
AATAACCACCATATTTAGCA+TGG - chr6_1:15189093-15189112 None:intergenic 30.0%
TGTATTCATGAAAAGGTGAT+TGG + chr6_1:15189208-15189227 Msa0876800:intron 30.0%
GTATTCATGAAAAGGTGATT+GGG + chr6_1:15189209-15189228 Msa0876800:intron 30.0%
ATTGAACAATGATTCTGCAA+TGG - chr6_1:15189244-15189263 None:intergenic 30.0%
TATGTTGTCAACATGCAATA+GGG - chr6_1:15189295-15189314 None:intergenic 30.0%
!! TACTCTCATATTGATGATGT+AGG + chr6_1:15189355-15189374 Msa0876800:intron 30.0%
AACTTTCTAATTTCAACCTG+TGG + chr6_1:15189389-15189408 Msa0876800:CDS 30.0%
ACTTTCTAATTTCAACCTGT+GGG + chr6_1:15189390-15189409 Msa0876800:CDS 30.0%
ACGTTATGCATATAAAGACA+AGG - chr6_1:15189513-15189532 None:intergenic 30.0%
AAAAATGGCATGTTTCCTTT+AGG - chr6_1:15189715-15189734 None:intergenic 30.0%
TTTCATTCATTCCTTCACAT+AGG + chr6_1:15189832-15189851 Msa0876800:intron 30.0%
TTCATTCATTCCTTCACATA+GGG + chr6_1:15189833-15189852 Msa0876800:intron 30.0%
TTAAATAAGTTCTGCTATGC+TGG + chr6_1:15190016-15190035 Msa0876800:CDS 30.0%
TAAATAAGTTCTGCTATGCT+GGG + chr6_1:15190017-15190036 Msa0876800:CDS 30.0%
ATAACAAGTTCAAAGATTGC+TGG - chr6_1:15190146-15190165 None:intergenic 30.0%
GGAGTTATATAACTTACCAA+CGG + chr6_1:15190271-15190290 Msa0876800:CDS 30.0%
!!! AAACTGTTATTTTTCGCGAT+CGG + chr6_1:15190595-15190614 Msa0876800:intron 30.0%
GCACATAATCAATTCTTACT+AGG - chr6_1:15190715-15190734 None:intergenic 30.0%
TTTAGAGAGCTACCATTAAA+AGG - chr6_1:15190920-15190939 None:intergenic 30.0%
AAAGGCTAAACATAGAAGAA+AGG - chr6_1:15191087-15191106 None:intergenic 30.0%
AGAAATGTGAAAAAGGCAAA+GGG - chr6_1:15191238-15191257 None:intergenic 30.0%
AAGAAATGTGAAAAAGGCAA+AGG - chr6_1:15191239-15191258 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr6_1:15191309-15191328 None:intergenic 30.0%
!! TCAAATGGGTTGTTACATAT+AGG + chr6_1:15191457-15191476 Msa0876800:intron 30.0%
!! CAAATGGGTTGTTACATATA+GGG + chr6_1:15191458-15191477 Msa0876800:intron 30.0%
!! TGTTTTTGTATTTCCTGAAG+GGG + chr6_1:15191507-15191526 Msa0876800:intron 30.0%
! ACAAAAATGGGCTTAAATCA+GGG - chr6_1:15191731-15191750 None:intergenic 30.0%
! TACAAAAATGGGCTTAAATC+AGG - chr6_1:15191732-15191751 None:intergenic 30.0%
TATATATCAAATGCGGCATA+TGG + chr6_1:15191760-15191779 Msa0876800:intron 30.0%
!!! CTTTCATACCTGTTTTAAGA+GGG + chr6_1:15191857-15191876 Msa0876800:intron 30.0%
! GTATGGTTGATGTCTAATTT+CGG + chr6_1:15192163-15192182 Msa0876800:intron 30.0%
CATGACAATATAGATATCAG+GGG - chr6_1:15192235-15192254 None:intergenic 30.0%
GCATGACAATATAGATATCA+GGG - chr6_1:15192236-15192255 None:intergenic 30.0%
TGCATGACAATATAGATATC+AGG - chr6_1:15192237-15192256 None:intergenic 30.0%
! ATGATAGAATGCATGTTTTC+AGG - chr6_1:15192310-15192329 None:intergenic 30.0%
! ATTAATCAATGCACTGGTAA+TGG - chr6_1:15192415-15192434 None:intergenic 30.0%
GAAACAATTAATCAATGCAC+TGG - chr6_1:15192421-15192440 None:intergenic 30.0%
ACATGTTAAAACCTAGACAA+TGG - chr6_1:15192468-15192487 None:intergenic 30.0%
ACATGTCTTAGTGTTACAAA+TGG + chr6_1:15192482-15192501 Msa0876800:intron 30.0%
TTAGTGTTACAAATGGTGTA+TGG + chr6_1:15192489-15192508 Msa0876800:intron 30.0%
!!! TCATACAAGTTTTTTGAACC+TGG + chr6_1:15192643-15192662 Msa0876800:intron 30.0%
TTAATAAGAGATAAGCAAGG+TGG - chr6_1:15193075-15193094 None:intergenic 30.0%
!!! CATTTTTTTTCTCTGGTGTT+AGG - chr6_1:15193105-15193124 None:intergenic 30.0%
AAAACAGATTCCTATGCTTT+AGG + chr6_1:15193146-15193165 Msa0876800:intron 30.0%
AAACAGATTCCTATGCTTTA+GGG + chr6_1:15193147-15193166 Msa0876800:intron 30.0%
GTTGATATCAGAATTAAAGC+AGG + chr6_1:15193170-15193189 Msa0876800:intron 30.0%
AAAGCAGGTTCCTAAAAATT+AGG + chr6_1:15193185-15193204 Msa0876800:intron 30.0%
! TTTTTGACAAATGCTTGAGA+GGG - chr6_1:15193235-15193254 None:intergenic 30.0%
!!! TTTTTTGACAAATGCTTGAG+AGG - chr6_1:15193236-15193255 None:intergenic 30.0%
! AATCTAATCAGATGCTGATT+GGG - chr6_1:15193472-15193491 None:intergenic 30.0%
! TTTTCAAAAGGGTGATACTA+AGG - chr6_1:15193502-15193521 None:intergenic 30.0%
ACATCTAGATGTTCTTCATT+TGG + chr6_1:15193574-15193593 Msa0876800:intron 30.0%
TTGTTCATCAGTTCATGAAT+TGG + chr6_1:15193598-15193617 Msa0876800:intron 30.0%
CTAGTTGTATAAATCATGGA+TGG + chr6_1:15193729-15193748 Msa0876800:intron 30.0%
! AAGAGCAGTAGTAGATTTTA+AGG - chr6_1:15193841-15193860 None:intergenic 30.0%
AGCAATATTATGCATTTAGG+AGG - chr6_1:15193959-15193978 None:intergenic 30.0%
ACACTTATCTCTATATCTGT+AGG + chr6_1:15194395-15194414 Msa0876800:intron 30.0%
! ATGTAACCCATTTGGAATTT+CGG + chr6_1:15194676-15194695 Msa0876800:intron 30.0%
TGAAACATCAACAAGAAATG+AGG - chr6_1:15194833-15194852 None:intergenic 30.0%
TCTGATTACCATTATTATGC+AGG + chr6_1:15194900-15194919 Msa0876800:intron 30.0%
TAATGCTGCAGAAATTTATG+TGG + chr6_1:15194994-15195013 Msa0876800:CDS 30.0%
AAGCATTCAACTACAAGATT+TGG - chr6_1:15195057-15195076 None:intergenic 30.0%
TTTCTGATATATGAGGATTG+AGG - chr6_1:15195086-15195105 None:intergenic 30.0%
CTCATATATCAGAAATGTGA+CGG + chr6_1:15195091-15195110 Msa0876800:intron 30.0%
TCATATATCAGAAATGTGAC+GGG + chr6_1:15195092-15195111 Msa0876800:intron 30.0%
ACTTATTTGTGCTTATCTAC+TGG + chr6_1:15195129-15195148 Msa0876800:intron 30.0%
!!! TGTATGCCTTTTTTTAGAAG+TGG + chr6_1:15195314-15195333 Msa0876800:intron 30.0%
TAGAGCAGAAGTAGAAATTA+AGG - chr6_1:15195598-15195617 None:intergenic 30.0%
! TAGTTTTTCACAACTGTTCA+TGG + chr6_1:15195623-15195642 Msa0876800:intron 30.0%
ACAACTGTTCATGGTATATT+TGG + chr6_1:15195632-15195651 Msa0876800:intron 30.0%
! ACATAACAAGAGGGTATAAT+TGG - chr6_1:15196073-15196092 None:intergenic 30.0%
GATATGAAACACATAACAAG+AGG - chr6_1:15196083-15196102 None:intergenic 30.0%
AATACACACATTTAACAAGC+AGG - chr6_1:15196125-15196144 None:intergenic 30.0%
GTAATTACAATGTGCATGTT+TGG + chr6_1:15196386-15196405 Msa0876800:intron 30.0%
!! AAAAATCATGTTTGGTTTGG+AGG - chr6_1:15196514-15196533 None:intergenic 30.0%
!! ATAGTTTGTGTTTAGTTTGG+TGG - chr6_1:15196645-15196664 None:intergenic 30.0%
TGAAAAAGAAATCCATGAGT+TGG + chr6_1:15197003-15197022 Msa0876800:three_prime_UTR 30.0%
AATCAACGGTCGATAATAAA+AGG - chr6_1:15197123-15197142 None:intergenic 30.0%
GAAGAAGAAGAAGAAGAAAG+AGG - chr6_1:15185949-15185968 None:intergenic 35.0%
! TCAGGAATACAACACTGTTT+TGG + chr6_1:15186146-15186165 Msa0876800:CDS 35.0%
! CAGGAATACAACACTGTTTT+GGG + chr6_1:15186147-15186166 Msa0876800:CDS 35.0%
TTTACACAGTAATCGAACTC+AGG + chr6_1:15186523-15186542 Msa0876800:intron 35.0%
ACCAAAAGGACAAATTGTTC+GGG - chr6_1:15186553-15186572 None:intergenic 35.0%
CACCAAAAGGACAAATTGTT+CGG - chr6_1:15186554-15186573 None:intergenic 35.0%
ACGAAAACAGCTTGAGTTAT+AGG + chr6_1:15186892-15186911 Msa0876800:intron 35.0%
TTACACTTCACTCACTTTAG+AGG + chr6_1:15187065-15187084 Msa0876800:intron 35.0%
GCATAAAATATGTAAGGTCC+GGG + chr6_1:15187213-15187232 Msa0876800:intron 35.0%
CATAAAATATGTAAGGTCCG+GGG + chr6_1:15187214-15187233 Msa0876800:intron 35.0%
!!! TTTTCATTTTTGGTAGTGGC+CGG - chr6_1:15187248-15187267 None:intergenic 35.0%
GCCACTACCAAAAATGAAAA+TGG + chr6_1:15187248-15187267 Msa0876800:intron 35.0%
! CTCTGATATAATGCCTTGTT+TGG - chr6_1:15187362-15187381 None:intergenic 35.0%
!! GATCTTGGTGTTTATTATGG+AGG + chr6_1:15187532-15187551 Msa0876800:intron 35.0%
! CTAATTTGAGTATTTAGGGC+CGG + chr6_1:15187556-15187575 Msa0876800:intron 35.0%
AAATGCAACTCAATCCAAAC+CGG - chr6_1:15187578-15187597 None:intergenic 35.0%
!! GTTCTCTAAAATAGTCGCAA+AGG - chr6_1:15187618-15187637 None:intergenic 35.0%
AACAAGCTCAAAACAGCTTA+AGG - chr6_1:15187665-15187684 None:intergenic 35.0%
!!! TTTAGTTTTTAGGGCCTGTT+TGG + chr6_1:15187886-15187905 Msa0876800:intron 35.0%
!!! AACTCATGTAAGGGTGTTTT+TGG - chr6_1:15188269-15188288 None:intergenic 35.0%
TGACCATAATAATTAGGGGT+AGG + chr6_1:15188343-15188362 Msa0876800:intron 35.0%
AAGCCTACCCCTAATTATTA+TGG - chr6_1:15188349-15188368 None:intergenic 35.0%
TTGCTTATAATTGAGTCCAG+AGG + chr6_1:15188453-15188472 Msa0876800:intron 35.0%
TGCTTATAATTGAGTCCAGA+GGG + chr6_1:15188454-15188473 Msa0876800:intron 35.0%
TGCTTATAATATACTCCCTC+TGG - chr6_1:15188472-15188491 None:intergenic 35.0%
AAGGGAATGAAAAGTTTCAC+GGG - chr6_1:15188693-15188712 None:intergenic 35.0%
CAAGGGAATGAAAAGTTTCA+CGG - chr6_1:15188694-15188713 None:intergenic 35.0%
CAAGGACCAAATGAAAATCA+TGG + chr6_1:15188760-15188779 Msa0876800:CDS 35.0%
! CCAAACCCATGATTTTCATT+TGG - chr6_1:15188769-15188788 None:intergenic 35.0%
CCAAATGAAAATCATGGGTT+TGG + chr6_1:15188766-15188785 Msa0876800:CDS 35.0%
TGTACAGGCAAAAACATATG+AGG - chr6_1:15188820-15188839 None:intergenic 35.0%
! ATAACTTGCACCAACTAACT+GGG + chr6_1:15188940-15188959 Msa0876800:intron 35.0%
CCATATTTAGCATGGAATCT+TGG - chr6_1:15189085-15189104 None:intergenic 35.0%
CCAAGATTCCATGCTAAATA+TGG + chr6_1:15189082-15189101 Msa0876800:intron 35.0%
AGATTCCATGCTAAATATGG+TGG + chr6_1:15189085-15189104 Msa0876800:intron 35.0%
CTTCAAATGACTGTAGCTAA+AGG + chr6_1:15189139-15189158 Msa0876800:intron 35.0%
GTGTGCATGTATTCATGAAA+AGG + chr6_1:15189201-15189220 Msa0876800:intron 35.0%
CTATGTTGTCAACATGCAAT+AGG - chr6_1:15189296-15189315 None:intergenic 35.0%
!! TACATTTGGCTTTACTTCCA+TGG - chr6_1:15189577-15189596 None:intergenic 35.0%
CAGATGTAGGTTTGTACATT+TGG - chr6_1:15189591-15189610 None:intergenic 35.0%
GTAGCAATATGACATACACT+CGG - chr6_1:15189650-15189669 None:intergenic 35.0%
TCATTCATTCCTTCACATAG+GGG + chr6_1:15189834-15189853 Msa0876800:intron 35.0%
TACAAAATACCCCTATGTGA+AGG - chr6_1:15189846-15189865 None:intergenic 35.0%
!!! CAGTAAAAGGTGTTTTGTTC+TGG - chr6_1:15190057-15190076 None:intergenic 35.0%
GCATCGAAATCATCAGTAAA+AGG - chr6_1:15190070-15190089 None:intergenic 35.0%
CTTAACATTCTTGAAATCCG+CGG - chr6_1:15190369-15190388 None:intergenic 35.0%
TTGTTCAAATTCCACTATGC+AGG - chr6_1:15190577-15190596 None:intergenic 35.0%
TGATTTCATGTCACACAAAC+AGG - chr6_1:15190675-15190694 None:intergenic 35.0%
!! AAGAGTGTCATGTAACATTC+TGG - chr6_1:15190897-15190916 None:intergenic 35.0%
! CATGACACTCTTCCTTTTAA+TGG + chr6_1:15190905-15190924 Msa0876800:intron 35.0%
AAATGTGAAAAAGGCAAAGG+GGG - chr6_1:15191236-15191255 None:intergenic 35.0%
GAAATGTGAAAAAGGCAAAG+GGG - chr6_1:15191237-15191256 None:intergenic 35.0%
CTTATATTTGATTCCCCTTC+AGG - chr6_1:15191523-15191542 None:intergenic 35.0%
TTTCCTGCCAGTTTAGTTAT+TGG + chr6_1:15191572-15191591 Msa0876800:intron 35.0%
TGCTTCACCAATAACTAAAC+TGG - chr6_1:15191582-15191601 None:intergenic 35.0%
TCTAATTAAAAAGGGCAACC+CGG + chr6_1:15191628-15191647 Msa0876800:intron 35.0%
! AGAGGCTTAGATTTTCAATC+TGG - chr6_1:15191806-15191825 None:intergenic 35.0%
!! GCTTTCATACCTGTTTTAAG+AGG + chr6_1:15191856-15191875 Msa0876800:intron 35.0%
GAGATAATCCCTCTTAAAAC+AGG - chr6_1:15191868-15191887 None:intergenic 35.0%
!! TTTTAAGAGGGATTATCTCC+TGG + chr6_1:15191869-15191888 Msa0876800:intron 35.0%
!! TTCTGATATTGATTTGGTGG+AGG + chr6_1:15191925-15191944 Msa0876800:intron 35.0%
ACTTCTTGAAATGCTGGAAA+AGG + chr6_1:15192200-15192219 Msa0876800:CDS 35.0%
!! ATTCATGCTCGCTTTAAAGT+TGG + chr6_1:15192376-15192395 Msa0876800:intron 35.0%
!! TTCATGCTCGCTTTAAAGTT+GGG + chr6_1:15192377-15192396 Msa0876800:intron 35.0%
!! ATGGTTGCTTTGTTTCAACT+AGG - chr6_1:15192549-15192568 None:intergenic 35.0%
TCTCGAATGACAATATAACC+AGG - chr6_1:15192664-15192683 None:intergenic 35.0%
TCTAACATAATCCCTTCTGT+TGG + chr6_1:15192724-15192743 Msa0876800:intron 35.0%
ATGAATTGCAACCAACAGAA+GGG - chr6_1:15192738-15192757 None:intergenic 35.0%
AGAGTTTGCAACACTTTATG+GGG - chr6_1:15192878-15192897 None:intergenic 35.0%
GAGAGTTTGCAACACTTTAT+GGG - chr6_1:15192879-15192898 None:intergenic 35.0%
TGAGAGTTTGCAACACTTTA+TGG - chr6_1:15192880-15192899 None:intergenic 35.0%
AACAGATTCCTATGCTTTAG+GGG + chr6_1:15193148-15193167 Msa0876800:intron 35.0%
GATGTTGATCATTCCTATTC+TGG + chr6_1:15193290-15193309 Msa0876800:intron 35.0%
! GAAGATTTGAAGTCCAGAAT+AGG - chr6_1:15193306-15193325 None:intergenic 35.0%
! CTTCATTCTAGGAAGAGATT+TGG + chr6_1:15193329-15193348 Msa0876800:intron 35.0%
!! GTTGATTTGCGATCTGAAAT+AGG + chr6_1:15193441-15193460 Msa0876800:intron 35.0%
GAATCTAATCAGATGCTGAT+TGG - chr6_1:15193473-15193492 None:intergenic 35.0%
GAAAAAAAAATCCCTTTGCC+TGG + chr6_1:15193517-15193536 Msa0876800:intron 35.0%
! AATTGGCTCAGAATACTAAC+TGG + chr6_1:15193615-15193634 Msa0876800:intron 35.0%
CTAACTGGAAATGCTATATC+TGG + chr6_1:15193630-15193649 Msa0876800:intron 35.0%
! TTCCATCTGTTTTACTTGCT+GGG + chr6_1:15193700-15193719 Msa0876800:intron 35.0%
! GTGGCTAGTTGTATAAATCA+TGG + chr6_1:15193725-15193744 Msa0876800:intron 35.0%
AATCTACTACTGCTCTTTGA+AGG + chr6_1:15193844-15193863 Msa0876800:intron 35.0%
!!! TTTATGGGTTAGGGTTTTTC+TGG - chr6_1:15194132-15194151 None:intergenic 35.0%
!!! CCAGTTTTGTTTATGGGTTA+GGG - chr6_1:15194141-15194160 None:intergenic 35.0%
CCTAACCCATAAACAAAACT+GGG + chr6_1:15194139-15194158 Msa0876800:intron 35.0%
AATACTACATCATGTCTGCT+TGG - chr6_1:15194167-15194186 None:intergenic 35.0%
! TAGTCCATAAGGCTTTAATG+GGG - chr6_1:15194279-15194298 None:intergenic 35.0%
! CTAGTCCATAAGGCTTTAAT+GGG - chr6_1:15194280-15194299 None:intergenic 35.0%
!! TCCAAATGGGTTACATTCTA+TGG - chr6_1:15194672-15194691 None:intergenic 35.0%
! TGTAACCCATTTGGAATTTC+GGG + chr6_1:15194677-15194696 Msa0876800:intron 35.0%
! ACCATCAAACTTGGTCATTT+TGG + chr6_1:15194749-15194768 Msa0876800:intron 35.0%
ACCAAAATGACCAAGTTTGA+TGG - chr6_1:15194753-15194772 None:intergenic 35.0%
!!! AAACTTGGTCATTTTGGTTG+TGG + chr6_1:15194755-15194774 Msa0876800:intron 35.0%
!!! ATTTTGGTTGTGGTGAAGTA+AGG + chr6_1:15194765-15194784 Msa0876800:intron 35.0%
CAATAGCACCTGCATAATAA+TGG - chr6_1:15194911-15194930 None:intergenic 35.0%
!! TTTGAGGACTTTCTAGCTTT+AGG + chr6_1:15194965-15194984 Msa0876800:CDS 35.0%
!! TTGAGGACTTTCTAGCTTTA+GGG + chr6_1:15194966-15194985 Msa0876800:CDS 35.0%
CGTCACATTTCTGATATATG+AGG - chr6_1:15195093-15195112 None:intergenic 35.0%
CATATATCAGAAATGTGACG+GGG + chr6_1:15195093-15195112 Msa0876800:intron 35.0%
TCTACTGGTATAAACACTTG+AGG + chr6_1:15195144-15195163 Msa0876800:intron 35.0%
TTTACAACAAAATATCGCCG+CGG + chr6_1:15195686-15195705 Msa0876800:intron 35.0%
AATAACTCACTTTCAAACCC+TGG - chr6_1:15196258-15196277 None:intergenic 35.0%
! TGCATGTTTGGATTCACTTT+TGG + chr6_1:15196398-15196417 Msa0876800:intron 35.0%
AAGGGCAATAATTAGTGAAC+TGG - chr6_1:15196718-15196737 None:intergenic 35.0%
GAAATCTGTTAGCTGTTGAT+AGG + chr6_1:15196969-15196988 Msa0876800:three_prime_UTR 35.0%
! AATTCTTGGTAACCAACTCA+TGG - chr6_1:15197018-15197037 None:intergenic 35.0%
TAGACTTGGAATGAATGTCA+AGG - chr6_1:15197068-15197087 None:intergenic 35.0%
TGACATTCATTCCAAGTCTA+AGG + chr6_1:15197068-15197087 Msa0876800:three_prime_UTR 35.0%
AATGAGATACACCTTAGACT+TGG - chr6_1:15197082-15197101 None:intergenic 35.0%
! TTCCAGCAGAAGAGTATAAC+AGG + chr6_1:15186103-15186122 Msa0876800:CDS 40.0%
! TGTTAACTTTTCGGTTCTCG+AGG + chr6_1:15186454-15186473 Msa0876800:intron 40.0%
! TCCCGAACAATTTGTCCTTT+TGG + chr6_1:15186549-15186568 Msa0876800:intron 40.0%
! CGAACAATTTGTCCTTTTGG+TGG + chr6_1:15186552-15186571 Msa0876800:intron 40.0%
TAATGGCATAAACACGTGTG+AGG + chr6_1:15186853-15186872 Msa0876800:intron 40.0%
AAGTGAGTTGCTCACTTTAG+AGG - chr6_1:15186926-15186945 None:intergenic 40.0%
!!! TTTCATTTTTGGTAGTGGCC+GGG - chr6_1:15187247-15187266 None:intergenic 40.0%
!! AATAGTCGCAAAGGTGCTTA+TGG - chr6_1:15187609-15187628 None:intergenic 40.0%
!! TGTCTAAGAACTTGCTACTC+TGG + chr6_1:15187991-15188010 Msa0876800:intron 40.0%
!! TGTCTAAGAACTTGCTACTC+TGG + chr6_1:15187991-15188010 Msa0876800:intron 40.0%
TAAAAGAGCAATGCCCTGTT+TGG - chr6_1:15188513-15188532 None:intergenic 40.0%
ATATGATGCTTGATGGAGTG+AGG + chr6_1:15188663-15188682 Msa0876800:CDS 40.0%
GAATGAAAAGTTTCACGGGT+TGG - chr6_1:15188689-15188708 None:intergenic 40.0%
!! ACTTTTCATTCCCTTGCTGT+AGG + chr6_1:15188698-15188717 Msa0876800:CDS 40.0%
GCATGATGCTTTCTTCTTCA+AGG + chr6_1:15188742-15188761 Msa0876800:CDS 40.0%
! AGCCATGCTGTTGATAGATA+TGG + chr6_1:15188853-15188872 Msa0876800:intron 40.0%
! GCCATGCTGTTGATAGATAT+GGG + chr6_1:15188854-15188873 Msa0876800:intron 40.0%
ACCCATATCTATCAACAGCA+TGG - chr6_1:15188858-15188877 None:intergenic 40.0%
! GATAACTTGCACCAACTAAC+TGG + chr6_1:15188939-15188958 Msa0876800:intron 40.0%
CAACATGCAATAGGGAGATA+TGG - chr6_1:15189287-15189306 None:intergenic 40.0%
GAAATGCAAGAACTCTGATC+AGG + chr6_1:15189412-15189431 Msa0876800:CDS 40.0%
AAAGCCTGTCTACAAGTAGA+TGG - chr6_1:15189456-15189475 None:intergenic 40.0%
TTTGGAGGAGATGAAATCCA+TGG + chr6_1:15189557-15189576 Msa0876800:CDS 40.0%
AGGTTATTGAGTATGTGGAG+AGG + chr6_1:15190177-15190196 Msa0876800:intron 40.0%
AATGCTGAGAATGTGATGGT+GGG + chr6_1:15190236-15190255 Msa0876800:CDS 40.0%
GCAGTATGGTATGCAACAAA+GGG - chr6_1:15190335-15190354 None:intergenic 40.0%
TGCAGTATGGTATGCAACAA+AGG - chr6_1:15190336-15190355 None:intergenic 40.0%
CGCGGATTTCAAGAATGTTA+AGG + chr6_1:15190367-15190386 Msa0876800:CDS 40.0%
CATGAACAGTCATACAGACA+TGG - chr6_1:15190402-15190421 None:intergenic 40.0%
GTGCTATAGTGTTAGTGTTG+CGG + chr6_1:15190463-15190482 Msa0876800:intron 40.0%
AACCATCATGCGTGCTATAA+AGG - chr6_1:15191105-15191124 None:intergenic 40.0%
GCAAAGGGGGTTTACATATA+GGG - chr6_1:15191223-15191242 None:intergenic 40.0%
TGGGTTGTTACATATAGGGA+CGG + chr6_1:15191462-15191481 Msa0876800:intron 40.0%
TTGTTACATATAGGGACGGA+GGG + chr6_1:15191466-15191485 Msa0876800:intron 40.0%
TCACCAATAACTAAACTGGC+AGG - chr6_1:15191578-15191597 None:intergenic 40.0%
! TGTGTTTTCTGTAAGAGCAG+TGG + chr6_1:15191702-15191721 Msa0876800:intron 40.0%
TGTCTAATTTCGGCAGTTGA+CGG + chr6_1:15192173-15192192 Msa0876800:intron 40.0%
CATGAATTGCAACCAACAGA+AGG - chr6_1:15192739-15192758 None:intergenic 40.0%
GATATCAACCCCTAAAGCAT+AGG - chr6_1:15193159-15193178 None:intergenic 40.0%
ATCTATCCAGTAGCTTGAGA+GGG - chr6_1:15193273-15193292 None:intergenic 40.0%
CTTATACGTGGAGAGAAACT+TGG - chr6_1:15193400-15193419 None:intergenic 40.0%
AGTTTCTCTCCACGTATAAG+TGG + chr6_1:15193400-15193419 Msa0876800:intron 40.0%
CAGATCGCAAATCAACTACT+GGG - chr6_1:15193437-15193456 None:intergenic 40.0%
TCAGATCGCAAATCAACTAC+TGG - chr6_1:15193438-15193457 None:intergenic 40.0%
AAGGGTGATACTAAGGAGAT+TGG - chr6_1:15193495-15193514 None:intergenic 40.0%
AGATACTTGACGATGATACC+AGG - chr6_1:15193538-15193557 None:intergenic 40.0%
CAGCAAGTAAAACAGATGGA+AGG - chr6_1:15193701-15193720 None:intergenic 40.0%
! CTTCCATCTGTTTTACTTGC+TGG + chr6_1:15193699-15193718 Msa0876800:intron 40.0%
TACCCAGCAAGTAAAACAGA+TGG - chr6_1:15193705-15193724 None:intergenic 40.0%
CCCTAACCCATAAACAAAAC+TGG + chr6_1:15194138-15194157 Msa0876800:intron 40.0%
!!! CCCAGTTTTGTTTATGGGTT+AGG - chr6_1:15194142-15194161 None:intergenic 40.0%
!!! TGGTGCCCAGTTTTGTTTAT+GGG - chr6_1:15194147-15194166 None:intergenic 40.0%
!!! TTGGTGCCCAGTTTTGTTTA+TGG - chr6_1:15194148-15194167 None:intergenic 40.0%
!! ATTGGATCCCTTGGATTAGT+CGG - chr6_1:15194234-15194253 None:intergenic 40.0%
! GCTAGTCCATAAGGCTTTAA+TGG - chr6_1:15194281-15194300 None:intergenic 40.0%
TGGCTGTCGTTGAAGTTAAA+GGG - chr6_1:15194652-15194671 None:intergenic 40.0%
ATGGCTGTCGTTGAAGTTAA+AGG - chr6_1:15194653-15194672 None:intergenic 40.0%
GCCATAGAATGTAACCCATT+TGG + chr6_1:15194668-15194687 Msa0876800:intron 40.0%
! GTAACCCATTTGGAATTTCG+GGG + chr6_1:15194678-15194697 Msa0876800:intron 40.0%
CCTCAAAAACTTGAAGACCA+CGG - chr6_1:15194952-15194971 None:intergenic 40.0%
!! GACTTTCTAGCTTTAGGGAA+GGG + chr6_1:15194971-15194990 Msa0876800:CDS 40.0%
! GGCTCACCACTTCTAAAAAA+AGG - chr6_1:15195323-15195342 None:intergenic 40.0%
! AAATGCTGATTGCTCTCTGT+AGG + chr6_1:15195362-15195381 Msa0876800:intron 40.0%
! AATGCTGATTGCTCTCTGTA+GGG + chr6_1:15195363-15195382 Msa0876800:intron 40.0%
TACTAAGTCAACATCAGCAG+AGG - chr6_1:15195735-15195754 None:intergenic 40.0%
!! GTTTGTGTTTAGTTTGGTGG+TGG - chr6_1:15196642-15196661 None:intergenic 40.0%
GTACATAGCAGTGAACATCA+AGG - chr6_1:15196818-15196837 None:intergenic 40.0%
ATGAGTCTTGGATCATCTTG+AGG - chr6_1:15196865-15196884 None:intergenic 40.0%
AGATGATCCAAGACTCATGT+TGG + chr6_1:15196867-15196886 Msa0876800:CDS 40.0%
TGAGTAACCAACATGAGTCT+TGG - chr6_1:15196877-15196896 None:intergenic 40.0%
! ATGTTCTAAATCTCGAGCGA+AGG - chr6_1:15196912-15196931 None:intergenic 40.0%
CGGTCGATAATAAAAGGAAC+TGG - chr6_1:15197117-15197136 None:intergenic 40.0%
ACCCATTTCGCACTGCTAAA+CGG - chr6_1:15186047-15186066 None:intergenic 45.0%
CTGCTGGAACGTTGTAGAAT+CGG - chr6_1:15186092-15186111 None:intergenic 45.0%
CTCCTGTTATACTCTTCTGC+TGG - chr6_1:15186108-15186127 None:intergenic 45.0%
GTTCTCTCAATGCTCAACGA+AGG + chr6_1:15186169-15186188 Msa0876800:CDS 45.0%
! ACTTTTCGGTTCTCGAGGAA+AGG + chr6_1:15186459-15186478 Msa0876800:intron 45.0%
! CTTTTCGGTTCTCGAGGAAA+GGG + chr6_1:15186460-15186479 Msa0876800:intron 45.0%
! TTTTCGGTTCTCGAGGAAAG+GGG + chr6_1:15186461-15186480 Msa0876800:intron 45.0%
GGTTAATGAGCTCCACCAAA+AGG - chr6_1:15186567-15186586 None:intergenic 45.0%
ACTAAGCAATTGGGCTCAAG+TGG - chr6_1:15186588-15186607 None:intergenic 45.0%
ACAGCTTGAGTTATAGGACC+TGG + chr6_1:15186898-15186917 Msa0876800:intron 45.0%
TGAGCTTAGCTCAGTTGGTT+AGG + chr6_1:15187185-15187204 Msa0876800:intron 45.0%
!!! TTCATTTTTGGTAGTGGCCG+GGG - chr6_1:15187246-15187265 None:intergenic 45.0%
! TTGAGTATTTAGGGCCGGTT+TGG + chr6_1:15187561-15187580 Msa0876800:intron 45.0%
GAACTTATGGAAACGGCTCA+TGG + chr6_1:15187634-15187653 Msa0876800:intron 45.0%
TCTCATGGATCCTACAGCAA+GGG - chr6_1:15188711-15188730 None:intergenic 45.0%
!! ATGCATTCTAGAGCCTCTCA+TGG - chr6_1:15188726-15188745 None:intergenic 45.0%
GAACAAGCAACCCAGTTAGT+TGG - chr6_1:15188953-15188972 None:intergenic 45.0%
AGAGTTCTTGCATTTCCCAC+AGG - chr6_1:15189408-15189427 None:intergenic 45.0%
TGCATGTAGCAAGCAGATGT+AGG - chr6_1:15189604-15189623 None:intergenic 45.0%
ATGTGGAGAGGTCAAAGCAA+TGG + chr6_1:15190189-15190208 Msa0876800:CDS 45.0%
CACCATCACATTCTCAGCAT+TGG - chr6_1:15190237-15190256 None:intergenic 45.0%
CAATGCTGAGAATGTGATGG+TGG + chr6_1:15190235-15190254 Msa0876800:CDS 45.0%
CTAGTAACGTATTCTGCCGT+TGG - chr6_1:15190290-15190309 None:intergenic 45.0%
CAACGGCAGAATACGTTACT+AGG + chr6_1:15190288-15190307 Msa0876800:CDS 45.0%
CGGCAGCATTAAATGCAGTA+TGG - chr6_1:15190349-15190368 None:intergenic 45.0%
TACTGCATTTAATGCTGCCG+CGG + chr6_1:15190349-15190368 Msa0876800:CDS 45.0%
GGAGAGTTGTTGTCATCTAG+CGG + chr6_1:15190441-15190460 Msa0876800:intron 45.0%
!!! CTGTTATTTTTCGCGATCGG+TGG + chr6_1:15190598-15190617 Msa0876800:intron 45.0%
GATCGGTGGTTGACAATTGT+AGG + chr6_1:15190612-15190631 Msa0876800:intron 45.0%
CGAGTAAGCCAGAATGAAGT+AGG - chr6_1:15190836-15190855 None:intergenic 45.0%
!! ACTTCATTCTGGCTTACTCG+TGG + chr6_1:15190836-15190855 Msa0876800:intron 45.0%
!! CTTCATTCTGGCTTACTCGT+GGG + chr6_1:15190837-15190856 Msa0876800:intron 45.0%
AGCCTTTATAGCACGCATGA+TGG + chr6_1:15191100-15191119 Msa0876800:intron 45.0%
GGTTTACATATAGGGACGGA+GGG - chr6_1:15191215-15191234 None:intergenic 45.0%
AGGGGGTTTACATATAGGGA+CGG - chr6_1:15191219-15191238 None:intergenic 45.0%
GGCAAAGGGGGTTTACATAT+AGG - chr6_1:15191224-15191243 None:intergenic 45.0%
GTTGTTACATATAGGGACGG+AGG + chr6_1:15191465-15191484 Msa0876800:intron 45.0%
CCACGATCAAAGTGAATGAG+AGG - chr6_1:15191824-15191843 None:intergenic 45.0%
CCTCTCATTCACTTTGATCG+TGG + chr6_1:15191821-15191840 Msa0876800:intron 45.0%
! TAGCCCACTGAAATTGACTC+CGG - chr6_1:15192000-15192019 None:intergenic 45.0%
GGATGCACTTCTTGAAATGC+TGG + chr6_1:15192194-15192213 Msa0876800:CDS 45.0%
TCTAGTGCATGCCATTGTCT+AGG + chr6_1:15192454-15192473 Msa0876800:intron 45.0%
AAAACTCCCTCTCAAGCTAC+TGG + chr6_1:15193264-15193283 Msa0876800:intron 45.0%
CATCTATCCAGTAGCTTGAG+AGG - chr6_1:15193274-15193293 None:intergenic 45.0%
CTATCTGCTACATGTGTGTG+TGG + chr6_1:15193357-15193376 Msa0876800:intron 45.0%
! TTGCACTTGCCACTTATACG+TGG - chr6_1:15193412-15193431 None:intergenic 45.0%
! TAATCAGATGCTGATTGGGC+AGG - chr6_1:15193468-15193487 None:intergenic 45.0%
TGACGATGATACCAGGCAAA+GGG - chr6_1:15193531-15193550 None:intergenic 45.0%
TTGACGATGATACCAGGCAA+AGG - chr6_1:15193532-15193551 None:intergenic 45.0%
!! CTGTTTTACTTGCTGGGTAG+TGG + chr6_1:15193706-15193725 Msa0876800:intron 45.0%
TTTGAAGGATGCCTTCAGGT+TGG + chr6_1:15193859-15193878 Msa0876800:intron 45.0%
GCAAAACTTGACCAACCTGA+AGG - chr6_1:15193873-15193892 None:intergenic 45.0%
CTGGCTGATGCTAACAAGTA+AGG - chr6_1:15194113-15194132 None:intergenic 45.0%
TCAAGGTCCGACTAATCCAA+GGG + chr6_1:15194224-15194243 Msa0876800:intron 45.0%
ATCTAACCTGAGACCTTGAG+AGG + chr6_1:15194325-15194344 Msa0876800:intron 45.0%
TAACACTTGCCTGGTGGTAT+TGG - chr6_1:15194372-15194391 None:intergenic 45.0%
AAGTGTGCATAACACTTGCC+TGG - chr6_1:15194381-15194400 None:intergenic 45.0%
ACGTCCCCGAAATTCCAAAT+GGG - chr6_1:15194685-15194704 None:intergenic 45.0%
AACGTCCCCGAAATTCCAAA+TGG - chr6_1:15194686-15194705 None:intergenic 45.0%
!! CCGTGGTCTTCAAGTTTTTG+AGG + chr6_1:15194949-15194968 Msa0876800:CDS 45.0%
!! GGACTTTCTAGCTTTAGGGA+AGG + chr6_1:15194970-15194989 Msa0876800:CDS 45.0%
ATATTCCTCGTAGACTACCG+CGG - chr6_1:15195706-15195725 None:intergenic 45.0%
AAGTCAACATCAGCAGAGGT+TGG - chr6_1:15195731-15195750 None:intergenic 45.0%
! ATGGTTGGCTACACTGAGAA+AGG + chr6_1:15195840-15195859 Msa0876800:CDS 45.0%
TTTCACCAGCAGCCATAATC+AGG - chr6_1:15196033-15196052 None:intergenic 45.0%
GATTATGGCTGCTGGTGAAA+AGG + chr6_1:15196033-15196052 Msa0876800:CDS 45.0%
CTTCAACTGCAGCTAACGAA+GGG - chr6_1:15196228-15196247 None:intergenic 45.0%
TGCAGTTGAAGCATACTACC+AGG + chr6_1:15196237-15196256 Msa0876800:CDS 45.0%
GCAGTTGAAGCATACTACCA+GGG + chr6_1:15196238-15196257 Msa0876800:CDS 45.0%
GATGTTCACTGCTATGTACG+TGG + chr6_1:15196819-15196838 Msa0876800:intron 45.0%
TGCTATGTACGTGGAATTGC+AGG + chr6_1:15196828-15196847 Msa0876800:intron 45.0%
!!! ATTATTCATTTTTAATTTTT+AGG + chr6_1:15186267-15186286 Msa0876800:intron 5.0%
!!! ATTATTCATTTTTAATTTTT+AGG + chr6_1:15186267-15186286 Msa0876800:intron 5.0%
!!! TTAATTTTAAGATAATTTTA+GGG - chr6_1:15187772-15187791 None:intergenic 5.0%
!!! TTTAATTTTAAGATAATTTT+AGG - chr6_1:15187773-15187792 None:intergenic 5.0%
!! AATTATCTTAAAATTAAAAA+TGG + chr6_1:15187775-15187794 Msa0876800:intron 5.0%
!!! ATTTTTAAATAATAAATCAA+CGG - chr6_1:15197137-15197156 None:intergenic 5.0%
ACCCGTTTAGCAGTGCGAAA+TGG + chr6_1:15186042-15186061 Msa0876800:CDS 50.0%
CCCATTTCGCACTGCTAAAC+GGG - chr6_1:15186046-15186065 None:intergenic 50.0%
CCCGTTTAGCAGTGCGAAAT+GGG + chr6_1:15186043-15186062 Msa0876800:CDS 50.0%
TGCGAAATGGGTCACTTCCA+CGG + chr6_1:15186055-15186074 Msa0876800:CDS 50.0%
! TTGCTCACTTTAGAGGAGCC+AGG - chr6_1:15186919-15186938 None:intergenic 50.0%
CTCTCATGGATCCTACAGCA+AGG - chr6_1:15188712-15188731 None:intergenic 50.0%
! CTTGCTGTAGGATCCATGAG+AGG + chr6_1:15188710-15188729 Msa0876800:CDS 50.0%
GAACTCTGATCAGGCTGTTC+AGG + chr6_1:15189421-15189440 Msa0876800:CDS 50.0%
GTCTACAAGTAGATGGCGAC+AGG - chr6_1:15189449-15189468 None:intergenic 50.0%
GTCGCCATCTACTTGTAGAC+AGG + chr6_1:15189449-15189468 Msa0876800:intron 50.0%
ATCACGGACAATTGCATGCC+TGG - chr6_1:15189975-15189994 None:intergenic 50.0%
GACCAGCTGCAGTCATATCA+CGG - chr6_1:15189991-15190010 None:intergenic 50.0%
TGATATGACTGCAGCTGGTC+TGG + chr6_1:15189991-15190010 Msa0876800:CDS 50.0%
! GATATGACTGCAGCTGGTCT+GGG + chr6_1:15189992-15190011 Msa0876800:CDS 50.0%
CGCCAATGCTGAGAATGTGA+TGG + chr6_1:15190232-15190251 Msa0876800:CDS 50.0%
!! GATGGTGGGTGTTACTGATG+AGG + chr6_1:15190250-15190269 Msa0876800:CDS 50.0%
GCAGAATACGTTACTAGGCG+TGG + chr6_1:15190293-15190312 Msa0876800:CDS 50.0%
GAATACGTTACTAGGCGTGG+AGG + chr6_1:15190296-15190315 Msa0876800:CDS 50.0%
GGCGTGGAGGATTCTTGAAT+AGG + chr6_1:15190309-15190328 Msa0876800:CDS 50.0%
CTCTAGCATAGCCTGCATAG+TGG + chr6_1:15190563-15190582 Msa0876800:intron 50.0%
!! ATTCTGGCTTACTCGTGGGA+AGG + chr6_1:15190841-15190860 Msa0876800:intron 50.0%
!! TTCTGGCTTACTCGTGGGAA+GGG + chr6_1:15190842-15190861 Msa0876800:intron 50.0%
GGGTTTACATATAGGGACGG+AGG - chr6_1:15191216-15191235 None:intergenic 50.0%
! TTGGTGGAGGTTTGAGACCT+TGG + chr6_1:15191938-15191957 Msa0876800:intron 50.0%
! CTTGAGAGGAGCACATTCCA+AGG - chr6_1:15191958-15191977 None:intergenic 50.0%
CTTGGAATGTGCTCCTCTCA+AGG + chr6_1:15191956-15191975 Msa0876800:intron 50.0%
ATCGAACCTGAGACCTTGAG+AGG - chr6_1:15191972-15191991 None:intergenic 50.0%
TCCCCGGAGTCAATTTCAGT+GGG + chr6_1:15191994-15192013 Msa0876800:intron 50.0%
! AGCCCACTGAAATTGACTCC+GGG - chr6_1:15191999-15192018 None:intergenic 50.0%
AGCGAGCATGAATTCCAGCT+TGG - chr6_1:15192369-15192388 None:intergenic 50.0%
! GCTCTTTGAAGGATGCCTTC+AGG + chr6_1:15193855-15193874 Msa0876800:intron 50.0%
CTCAAGGTCCGACTAATCCA+AGG + chr6_1:15194223-15194242 Msa0876800:intron 50.0%
TTAATGGGGTCCCCACAAGT+GGG - chr6_1:15194265-15194284 None:intergenic 50.0%
TTTAATGGGGTCCCCACAAG+TGG - chr6_1:15194266-15194285 None:intergenic 50.0%
GGGACCCCATTAAAGCCTTA+TGG + chr6_1:15194272-15194291 Msa0876800:intron 50.0%
!! TTTCGGTGGGCTAGTCCATA+AGG - chr6_1:15194290-15194309 None:intergenic 50.0%
!! ATGGACTAGCCCACCGAAAT+TGG + chr6_1:15194291-15194310 Msa0876800:intron 50.0%
!! GTGGTATTGGCTTGAGACCT+TGG - chr6_1:15194359-15194378 None:intergenic 50.0%
TGTGCATAACACTTGCCTGG+TGG - chr6_1:15194378-15194397 None:intergenic 50.0%
!! TGCAGGTGCTATTGTCATGC+CGG + chr6_1:15194917-15194936 Msa0876800:intron 50.0%
AAGACCACGGTCAATCTCTC+CGG - chr6_1:15194939-15194958 None:intergenic 50.0%
TTGCTCTCTGTAGGGCTGTT+TGG + chr6_1:15195371-15195390 Msa0876800:intron 50.0%
CAAGCGTCTGCAGTCATTGT+TGG - chr6_1:15195809-15195828 None:intergenic 50.0%
! CAGGAGCTCACTTCCCATTT+TGG - chr6_1:15196014-15196033 None:intergenic 50.0%
GGGAAGTGAGCTCCTGATTA+TGG + chr6_1:15196018-15196037 Msa0876800:CDS 50.0%
GCTTCAACTGCAGCTAACGA+AGG - chr6_1:15196229-15196248 None:intergenic 50.0%
GCGAAATGGGTCACTTCCAC+GGG + chr6_1:15186056-15186075 Msa0876800:CDS 55.0%
TGGGTCACTTCCACGGGTTT+CGG + chr6_1:15186062-15186081 Msa0876800:CDS 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr6_1:15187183-15187202 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr6_1:15187180-15187199 Msa0876800:intron 55.0%
CTACATGCATGTGCAGCCCA+AGG + chr6_1:15189615-15189634 Msa0876800:CDS 55.0%
CACTCGGTCTATGCGTCCTT+GGG - chr6_1:15189634-15189653 None:intergenic 55.0%
ACACTCGGTCTATGCGTCCT+TGG - chr6_1:15189635-15189654 None:intergenic 55.0%
GTCCGTGATATGACTGCAGC+TGG + chr6_1:15189986-15190005 Msa0876800:CDS 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr6_1:15191650-15191669 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+TGG + chr6_1:15191654-15191673 Msa0876800:intron 55.0%
CTAAAGCTCCCGCATACGCT+GGG + chr6_1:15191655-15191674 Msa0876800:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG + chr6_1:15191963-15191982 Msa0876800:intron 55.0%
GTCTCAGGTTCGATTCTCCC+CGG + chr6_1:15191978-15191997 Msa0876800:intron 55.0%
CTCCCCGGAGTCAATTTCAG+TGG + chr6_1:15191993-15192012 Msa0876800:intron 55.0%
! GCCCACTGAAATTGACTCCG+GGG - chr6_1:15191998-15192017 None:intergenic 55.0%
ATGGCATGTCTTGCTGAGCC+TGG + chr6_1:15194008-15194027 Msa0876800:intron 55.0%
AATCCCACCGTCCCACTTGT+GGG + chr6_1:15194251-15194270 Msa0876800:intron 55.0%
TAGCCCACCGAAATTGGCAC+CGG + chr6_1:15194297-15194316 Msa0876800:intron 55.0%
! ATTCCCCCCGGTGCCAATTT+CGG - chr6_1:15194307-15194326 None:intergenic 55.0%
GTCTCAGGTTAGATTCCCCC+CGG - chr6_1:15194319-15194338 None:intergenic 55.0%
AGTGCTCCTCTCAAGGTCTC+AGG - chr6_1:15194334-15194353 None:intergenic 55.0%
!! CTTGGAGAGTGCTCCTCTCA+AGG - chr6_1:15194341-15194360 None:intergenic 55.0%
!! CTTGAGAGGAGCACTCTCCA+AGG + chr6_1:15194339-15194358 Msa0876800:intron 55.0%
GGTCTCAAGCCAATACCACC+AGG + chr6_1:15194360-15194379 Msa0876800:intron 55.0%
! GAAATGTGACGGGGCCTGTT+TGG + chr6_1:15195102-15195121 Msa0876800:intron 55.0%
GAGCTCCTGATTATGGCTGC+TGG + chr6_1:15196025-15196044 Msa0876800:CDS 55.0%
GGGTCACTTCCACGGGTTTC+GGG + chr6_1:15186063-15186082 Msa0876800:CDS 60.0%
GGTCACTTCCACGGGTTTCG+GGG + chr6_1:15186064-15186083 Msa0876800:CDS 60.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr6_1:15187226-15187245 Msa0876800:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr6_1:15191649-15191668 None:intergenic 60.0%
AATCCCGGACCCAGCGTATG+CGG - chr6_1:15191667-15191686 None:intergenic 60.0%
GACGGTGGGATTGGATCCCT+TGG - chr6_1:15194243-15194262 None:intergenic 60.0%
CACAAGTGGGACGGTGGGAT+TGG - chr6_1:15194252-15194271 None:intergenic 60.0%
CAATCCCACCGTCCCACTTG+TGG + chr6_1:15194250-15194269 Msa0876800:intron 60.0%
ATCCCACCGTCCCACTTGTG+GGG + chr6_1:15194252-15194271 Msa0876800:intron 60.0%
AGCCCACCGAAATTGGCACC+GGG + chr6_1:15194298-15194317 Msa0876800:intron 60.0%
CATGCCGGAGAGATTGACCG+TGG + chr6_1:15194932-15194951 Msa0876800:CDS 60.0%
TATCGCCGCGGTAGTCTACG+AGG + chr6_1:15195698-15195717 Msa0876800:intron 60.0%
AATCGGAGCCCCGAAACCCG+TGG - chr6_1:15186075-15186094 None:intergenic 65.0%
GGTTCTCGAGGAAAGGGGCC+TGG + chr6_1:15186466-15186485 Msa0876800:intron 65.0%
AGTGGCCGGGGTTTGAACCC+CGG - chr6_1:15187234-15187253 None:intergenic 65.0%
ATCCCGGACCCAGCGTATGC+GGG - chr6_1:15191666-15191685 None:intergenic 65.0%
GTCCCCACAAGTGGGACGGT+GGG - chr6_1:15194257-15194276 None:intergenic 65.0%
TGGGGTCCCCACAAGTGGGA+CGG - chr6_1:15194261-15194280 None:intergenic 65.0%
GCCCACCGAAATTGGCACCG+GGG + chr6_1:15194299-15194318 Msa0876800:intron 65.0%
! CCCCCGGTGCCAATTTCGGT+GGG - chr6_1:15194303-15194322 None:intergenic 65.0%
! CCCACCGAAATTGGCACCGG+GGG + chr6_1:15194300-15194319 Msa0876800:intron 65.0%
! CCACCGAAATTGGCACCGGG+GGG + chr6_1:15194301-15194320 Msa0876800:intron 65.0%
GCTCCCGCATACGCTGGGTC+CGG + chr6_1:15191660-15191679 Msa0876800:intron 70.0%
CTCCCGCATACGCTGGGTCC+GGG + chr6_1:15191661-15191680 Msa0876800:intron 70.0%
GGTCCCCACAAGTGGGACGG+TGG - chr6_1:15194258-15194277 None:intergenic 70.0%
! CCCCCCGGTGCCAATTTCGG+TGG - chr6_1:15194304-15194323 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 15185830 15197197 15185830 ID=Msa0876800;Name=Msa0876800
chr6_1 mRNA 15185830 15197197 15185830 ID=Msa0876800-mRNA-1;Parent=Msa0876800;Name=Msa0876800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=84|1|1|1|0.91|0.92|13|264|444
chr6_1 exon 15185830 15185938 15185830 ID=Msa0876800-mRNA-1:exon:4397;Parent=Msa0876800-mRNA-1
chr6_1 exon 15186037 15186190 15186037 ID=Msa0876800-mRNA-1:exon:4398;Parent=Msa0876800-mRNA-1
chr6_1 exon 15188634 15188796 15188634 ID=Msa0876800-mRNA-1:exon:4399;Parent=Msa0876800-mRNA-1
chr6_1 exon 15189377 15189442 15189377 ID=Msa0876800-mRNA-1:exon:4400;Parent=Msa0876800-mRNA-1
chr6_1 exon 15189555 15189652 15189555 ID=Msa0876800-mRNA-1:exon:4401;Parent=Msa0876800-mRNA-1
chr6_1 exon 15189976 15190093 15189976 ID=Msa0876800-mRNA-1:exon:4402;Parent=Msa0876800-mRNA-1
chr6_1 exon 15190179 15190388 15190179 ID=Msa0876800-mRNA-1:exon:4403;Parent=Msa0876800-mRNA-1
chr6_1 exon 15192189 15192265 15192189 ID=Msa0876800-mRNA-1:exon:4404;Parent=Msa0876800-mRNA-1
chr6_1 exon 15194922 15195015 15194922 ID=Msa0876800-mRNA-1:exon:4405;Parent=Msa0876800-mRNA-1
chr6_1 exon 15195822 15195887 15195822 ID=Msa0876800-mRNA-1:exon:4406;Parent=Msa0876800-mRNA-1
chr6_1 exon 15195977 15196054 15195977 ID=Msa0876800-mRNA-1:exon:4407;Parent=Msa0876800-mRNA-1
chr6_1 exon 15196166 15196267 15196166 ID=Msa0876800-mRNA-1:exon:4408;Parent=Msa0876800-mRNA-1
chr6_1 exon 15196850 15197197 15196850 ID=Msa0876800-mRNA-1:exon:4409;Parent=Msa0876800-mRNA-1
chr6_1 five_prime_UTR 15185830 15185913 15185830 ID=Msa0876800-mRNA-1:five_prime_utr;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15185914 15185938 15185914 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15186037 15186190 15186037 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15188634 15188796 15188634 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15189377 15189442 15189377 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15189555 15189652 15189555 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15189976 15190093 15189976 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15190179 15190388 15190179 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15192189 15192265 15192189 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15194922 15195015 15194922 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15195822 15195887 15195822 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15195977 15196054 15195977 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15196166 15196267 15196166 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 CDS 15196850 15196933 15196850 ID=Msa0876800-mRNA-1:cds;Parent=Msa0876800-mRNA-1
chr6_1 three_prime_UTR 15196934 15197197 15196934 ID=Msa0876800-mRNA-1:three_prime_utr;Parent=Msa0876800-mRNA-1
Gene Sequence

>Msa0876800

ATGAAATTTCTTCATTCTCTCTTAGGTAAGACCCGTTTAGCAGTGCGAAATGGGTCACTTCCACGGGTTTCGGGGCTCCGATTCTACAACGTTCCAGCAGAAGAGTATAACAGGAGAAACTACGCTAAAAATGTTCAGGAATACAACACTGTTTTGGGTTCTCTCAATGCTCAACGAAGGATTTTTTTGCTGAGAGATGTGTATGAAGATATGATGCTTGATGGAGTGAGGCCAACCCGTGAAACTTTTCATTCCCTTGCTGTAGGATCCATGAGAGGCTCTAGAATGCATGATGCTTTCTTCTTCAAGGACCAAATGAAAATCATGGGTTTGGTTCCTGATGTTACTTTCTACAACTTTCTAATTTCAACCTGTGGGAAATGCAAGAACTCTGATCAGGCTGTTCAGATTTTGGAGGAGATGAAATCCATGGAAGTAAAGCCAAATGTACAAACCTACATCTGCTTGCTACATGCATGTGCAGCCCAAGGACGCATAGACCGAGTGCATGCAATTGTCCGTGATATGACTGCAGCTGGTCTGGGATTAAATAAGTTCTGCTATGCTGGGCTTATAGTTGCACACCAGAACAAAACACCTTTTACTGATGATTTCGATGCAAAAGTTATTGAGTATGTGGAGAGGTCAAAGCAATGGACTTCAGTAGAAACTGATAGCGCCAATGCTGAGAATGTGATGGTGGGTGTTACTGATGAGGAGTTATATAACTTACCAACGGCAGAATACGTTACTAGGCGTGGAGGATTCTTGAATAGGCCCTTTGTTGCATACCATACTGCATTTAATGCTGCCGCGGATTTCAAGAATGTTAAGTTGACGGATGCACTTCTTGAAATGCTGGAAAAGGAGAAGAAAACCCCTGATATCTATATTGTCATGCAAGTAATTAGGTGCTATTGTCATGCCGGAGAGATTGACCGTGGTCTTCAAGTTTTTGAGGACTTTCTAGCTTTAGGGAAGGGTAATGCTGCAGAAATTTATGTGACGCTTGCAGAGGGGGCAATGGTTGGCTACACTGAGAAAGGAATGCAAATTTCTATAGATATACTGACAAGAATGAATGAAAGAAACTTTTTCATGAATTCCAAAATGGGAAGTGAGCTCCTGATTATGGCTGCTGGTGAAAAGACTGGAGGATATACTAATGCTAACTACATATGGGACTTGATGCGAGCTCGTAACATATACCCTTCGTTAGCTGCAGTTGAAGCATACTACCAGGGTTTGAAAGATCGACAGATTCCTCAAGATGATCCAAGACTCATGTTGGTTACTCAAATGTATGACAACCTTCGCTCGAGATTTAGAACATGA
Protein sequence

>Msa0876800

MKFLHSLLGKTRLAVRNGSLPRVSGLRFYNVPAEEYNRRNYAKNVQEYNTVLGSLNAQRRIFLLRDVYEDMMLDGVRPTRETFHSLAVGSMRGSRMHDAFFFKDQMKIMGLVPDVTFYNFLISTCGKCKNSDQAVQILEEMKSMEVKPNVQTYICLLHACAAQGRIDRVHAIVRDMTAAGLGLNKFCYAGLIVAHQNKTPFTDDFDAKVIEYVERSKQWTSVETDSANAENVMVGVTDEELYNLPTAEYVTRRGGFLNRPFVAYHTAFNAAADFKNVKLTDALLEMLEKEKKTPDIYIVMQVIRCYCHAGEIDRGLQVFEDFLALGKGNAAEIYVTLAEGAMVGYTEKGMQISIDILTRMNERNFFMNSKMGSELLIMAAGEKTGGYTNANYIWDLMRARNIYPSLAAVEAYYQGLKDRQIPQDDPRLMLVTQMYDNLRSRFRT*