AlfalfaGEDB | Msa1409770

M. sativa cultivar zhongmu-4 / Msa1409770

KEGG: K09422
GO: GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006357 GO:0006629 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009267 GO:0009605 GO:0009653 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009751 GO:0009753 GO:0009755 GO:0009791 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0009991 GO:0010015 GO:0010033 GO:0010371 GO:0010373 GO:0010468 GO:0010476 GO:0010556 GO:0010558 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0014070 GO:0016036 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0019752 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0032350 GO:0032351 GO:0032353 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0042493 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0045892 GO:0045934 GO:0046394 GO:0046677 GO:0046885 GO:0046890 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051055 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0060255 GO:0061458 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071495 GO:0071496 GO:0071704 GO:0072505 GO:0072506 GO:0080086 GO:0080090 GO:0090567 GO:0097159 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000112 GO:2000113 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1409770	XP_003592641.2	93.730	319	11	4	1	318	2	312	0.0	602

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1409770	sp\|Q9C9G7\|MYB62_ARATH	64.179	201	58	1	23	223	16	202	1.35e-84	259

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1409770	A0A396JYW1	93.730	319	11	4	1	318	2	312	0.0	602

TFs/TRs:

Gene ID	Type	Classification
Msa1409770	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1359820	Msa1409770	0.827443	1.560214e-54	-8.615850e-47
Msa1409770	Msa1423990	0.802290	6.019245e-49	-8.615850e-47
Msa1409770	Msa1457660	0.881550	2.187392e-70	-8.615850e-47
Msa0639460	Msa1409770	0.818407	1.991770e-52	-8.615850e-47
Msa0815320	Msa1409770	0.830210	3.339420e-55	-8.615850e-47
Msa0818010	Msa1409770	0.810498	1.118746e-50	-8.615850e-47
Msa0138290	Msa1409770	0.938168	1.050844e-98	-8.615850e-47
Msa1288000	Msa1409770	0.805761	1.141907e-49	-8.615850e-47
Msa1006250	Msa1409770	0.837024	6.634928e-57	-8.615850e-47
Msa1131820	Msa1409770	0.800329	1.517041e-48	-8.615850e-47
Msa0533430	Msa1409770	0.803883	2.818721e-49	-8.615850e-47
Msa0853550	Msa1409770	0.806529	7.870722e-50	-8.615850e-47
Msa0884920	Msa1409770	0.823805	1.136829e-53	-8.615850e-47
Msa0902020	Msa1409770	0.828637	8.047427e-55	-8.615850e-47
Msa0963310	Msa1409770	0.802795	4.735884e-49	-8.615850e-47
Msa0965750	Msa1409770	0.808404	3.149447e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1409770	MtrunA17_Chr1g0209661	93.730	319	11	4	1	318	2	312	0.0	602
Msa1409770	MtrunA17_Chr1g0194291	67.097	155	47	2	14	166	7	159	4.43e-74	229
Msa1409770	MtrunA17_Chr1g0194301	55.689	167	70	1	26	188	33	199	5.19e-69	216
Msa1409770	MtrunA17_Chr2g0293911	72.857	140	38	0	20	159	18	157	1.60e-67	214
Msa1409770	MtrunA17_Chr4g0068921	69.784	139	42	0	21	159	19	157	3.96e-65	203
Msa1409770	MtrunA17_Chr6g0450101	73.333	120	32	0	15	134	3	122	6.98e-65	203
Msa1409770	MtrunA17_Chr7g0228231	75.630	119	28	1	14	132	3	120	1.23e-64	202
Msa1409770	MtrunA17_Chr1g0168661	69.091	110	34	0	22	131	17	126	3.24e-53	175
Msa1409770	MtrunA17_Chr1g0186061	66.667	108	36	0	22	129	16	123	3.99e-51	169
Msa1409770	MtrunA17_Chr2g0327821	61.468	109	42	0	23	131	3	111	2.78e-47	159
Msa1409770	MtrunA17_Chr4g0030881	60.177	113	38	1	27	132	8	120	7.46e-46	156
Msa1409770	MtrunA17_Chr5g0410961	60.000	115	46	0	22	136	8	122	8.76e-46	158
Msa1409770	MtrunA17_Chr1g0187761	60.870	115	45	0	26	140	12	126	2.71e-45	154
Msa1409770	MtrunA17_Chr7g0275911	66.038	106	36	0	26	131	12	117	4.43e-45	154
Msa1409770	MtrunA17_Chr4g0039971	55.000	120	54	0	22	141	9	128	1.17e-44	155
Msa1409770	MtrunA17_Chr4g0048511	58.120	117	49	0	20	136	7	123	1.36e-44	155
Msa1409770	MtrunA17_Chr8g0346561	63.551	107	39	0	26	132	12	118	4.61e-44	152
Msa1409770	MtrunA17_Chr1g0167691	61.111	108	42	0	22	129	8	115	5.46e-44	151
Msa1409770	MtrunA17_Chr5g0395281	53.279	122	57	0	20	141	6	127	7.52e-44	152
Msa1409770	MtrunA17_Chr2g0281071	57.265	117	50	0	20	136	7	123	8.34e-44	153
Msa1409770	MtrunA17_Chr4g0070611	62.963	108	40	0	26	133	12	119	1.20e-43	152
Msa1409770	MtrunA17_Chr4g0068061	62.500	104	39	0	26	129	12	115	1.98e-43	152
Msa1409770	MtrunA17_Chr3g0121241	63.462	104	38	0	26	129	42	145	2.02e-43	151
Msa1409770	MtrunA17_Chr1g0180391	55.833	120	53	0	12	131	5	124	2.60e-43	148
Msa1409770	MtrunA17_Chr1g0203411	58.559	111	46	0	22	132	8	118	2.66e-43	150
Msa1409770	MtrunA17_Chr3g0115821	57.391	115	49	0	22	136	8	122	3.94e-43	151
Msa1409770	MtrunA17_Chr4g0070641	62.963	108	40	0	26	133	12	119	6.22e-43	145
Msa1409770	MtrunA17_Chr3g0080861	57.547	106	45	0	26	131	37	142	8.19e-43	154
Msa1409770	MtrunA17_Chr1g0193371	52.800	125	59	0	23	147	9	133	1.07e-42	150
Msa1409770	MtrunA17_Chr4g0037141	55.200	125	56	0	22	146	8	132	1.26e-42	148
Msa1409770	MtrunA17_Chr3g0131121	55.285	123	55	0	22	144	8	130	1.65e-42	148
Msa1409770	MtrunA17_Chr3g0099131	56.075	107	47	0	26	132	41	147	2.01e-42	153
Msa1409770	MtrunA17_Chr8g0354661	52.991	117	55	0	15	131	26	142	2.45e-42	153
Msa1409770	MtrunA17_Chr8g0387421	58.182	110	46	0	23	132	9	118	3.26e-42	148
Msa1409770	MtrunA17_Chr2g0330041	58.095	105	44	0	25	129	11	115	4.24e-42	150
Msa1409770	MtrunA17_Chr7g0228891	53.782	119	55	0	26	144	12	130	4.73e-42	146
Msa1409770	MtrunA17_Chr2g0323411	57.391	115	49	0	22	136	8	122	6.35e-42	147
Msa1409770	MtrunA17_Chr3g0110351	52.542	118	56	0	26	143	12	129	8.50e-42	147
Msa1409770	MtrunA17_Chr1g0167661	58.333	108	45	0	22	129	8	115	9.01e-42	145
Msa1409770	MtrunA17_Chr8g0385321	56.522	115	50	0	22	136	8	122	1.07e-41	147
Msa1409770	MtrunA17_Chr4g0032401	52.542	118	56	0	18	135	9	126	1.10e-41	147
Msa1409770	MtrunA17_Chr7g0261281	38.462	234	127	4	26	242	12	245	2.05e-41	145
Msa1409770	MtrunA17_Chr2g0323351	53.968	126	56	1	22	145	8	133	2.32e-41	144
Msa1409770	MtrunA17_Chr4g0022901	60.952	105	41	0	26	130	13	117	2.37e-41	144
Msa1409770	MtrunA17_Chr4g0022931	53.600	125	55	1	26	147	13	137	2.45e-41	144
Msa1409770	MtrunA17_Chr2g0328771	56.481	108	47	0	26	133	20	127	3.25e-41	145
Msa1409770	MtrunA17_Chr6g0453471	57.658	111	47	0	26	136	12	122	3.75e-41	146
Msa1409770	MtrunA17_Chr7g0274581	54.545	110	50	0	26	135	12	121	3.79e-41	142
Msa1409770	MtrunA17_Chr7g0270891	52.033	123	59	0	25	147	11	133	4.00e-41	146
Msa1409770	MtrunA17_Chr7g0217741	57.658	111	47	0	26	136	12	122	5.55e-41	145
Msa1409770	MtrunA17_Chr5g0434571	53.448	116	54	0	26	141	48	163	8.49e-41	145
Msa1409770	MtrunA17_Chr4g0057031	55.856	111	49	0	26	136	12	122	1.06e-40	143
Msa1409770	MtrunA17_Chr1g0193801	51.220	123	60	0	25	147	11	133	1.09e-40	146
Msa1409770	MtrunA17_Chr8g0349261	56.250	112	48	1	26	136	13	124	1.85e-40	143
Msa1409770	MtrunA17_Chr5g0397231	61.000	100	39	0	23	122	9	108	2.03e-40	144
Msa1409770	MtrunA17_Chr8g0342541	57.143	105	45	0	25	129	11	115	2.20e-40	144
Msa1409770	MtrunA17_Chr1g0151941	55.963	109	47	1	22	129	8	116	2.82e-40	141
Msa1409770	MtrunA17_Chr4g0022881	57.009	107	46	0	22	128	8	114	3.97e-40	140
Msa1409770	MtrunA17_Chr4g0022911	59.048	105	43	0	26	130	13	117	4.27e-40	142
Msa1409770	MtrunA17_Chr8g0343831	57.407	108	46	0	25	132	7	114	6.12e-40	140
Msa1409770	MtrunA17_Chr4g0042671	54.167	120	55	0	22	141	8	127	6.93e-40	144
Msa1409770	MtrunA17_Chr4g0055981	49.624	133	65	1	1	133	32	162	7.65e-40	139
Msa1409770	MtrunA17_Chr3g0088461	53.982	113	52	0	19	131	15	127	7.89e-40	142
Msa1409770	MtrunA17_Chr5g0435101	49.587	121	61	0	22	142	7	127	8.78e-40	139
Msa1409770	MtrunA17_Chr1g0194951	59.615	104	42	0	26	129	12	115	1.18e-39	143
Msa1409770	MtrunA17_Chr8g0342521	52.500	120	57	0	25	144	11	130	1.38e-39	142
Msa1409770	MtrunA17_Chr1g0154031	53.774	106	49	0	26	131	76	181	1.58e-39	143
Msa1409770	MtrunA17_Chr6g0452271	47.200	125	66	0	22	146	8	132	2.88e-39	141
Msa1409770	MtrunA17_Chr1g0203441	56.250	112	48	1	27	137	14	125	3.28e-39	139
Msa1409770	MtrunA17_Chr2g0309911	54.286	105	48	0	25	129	10	114	4.89e-39	140
Msa1409770	MtrunA17_Chr4g0044421	43.827	162	78	2	28	181	14	170	5.50e-39	136
Msa1409770	MtrunA17_Chr3g0103281	52.174	115	55	0	22	136	8	122	6.34e-39	140
Msa1409770	MtrunA17_Chr3g0117091	47.143	140	68	2	25	163	11	145	1.11e-38	140
Msa1409770	MtrunA17_Chr7g0217221	37.727	220	88	5	26	220	12	207	2.08e-38	137
Msa1409770	MtrunA17_Chr1g0211161	50.420	119	59	0	23	141	10	128	2.10e-38	135
Msa1409770	MtrunA17_Chr7g0271241	61.224	98	38	0	25	122	11	108	2.64e-38	139
Msa1409770	MtrunA17_Chr4g0058631	50.420	119	59	0	23	141	9	127	3.86e-38	139
Msa1409770	MtrunA17_Chr4g0022891	51.327	113	55	0	22	134	8	120	1.01e-37	134
Msa1409770	MtrunA17_Chr3g0092401	46.269	134	66	2	26	154	13	145	3.51e-37	135
Msa1409770	MtrunA17_Chr2g0311221	54.808	104	47	0	22	125	10	113	5.19e-37	135
Msa1409770	MtrunA17_Chr7g0254411	50.442	113	56	0	22	134	8	120	5.59e-37	135
Msa1409770	MtrunA17_Chr6g0470971	47.619	126	65	1	16	140	4	129	7.00e-37	133
Msa1409770	MtrunA17_Chr8g0342481	55.660	106	46	1	25	129	11	116	7.49e-37	136
Msa1409770	MtrunA17_Chr2g0322521	52.830	106	50	0	26	131	29	134	1.53e-36	135
Msa1409770	MtrunA17_Chr4g0028311	55.046	109	48	1	22	129	8	116	3.98e-36	132
Msa1409770	MtrunA17_Chr6g0453211	56.566	99	43	0	26	124	12	110	4.36e-36	132
Msa1409770	MtrunA17_Chr4g0060721	52.885	104	49	0	26	129	13	116	9.46e-36	131
Msa1409770	MtrunA17_Chr1g0192411	51.402	107	52	0	25	131	11	117	1.05e-35	133
Msa1409770	MtrunA17_Chr7g0269831	55.046	109	49	0	22	130	8	116	1.38e-35	132
Msa1409770	MtrunA17_Chr5g0417821	51.351	111	54	0	26	136	7	117	1.54e-35	130
Msa1409770	MtrunA17_Chr8g0334881	45.614	114	61	1	21	133	5	118	8.13e-35	129
Msa1409770	MtrunA17_Chr1g0152011	55.238	105	46	1	26	129	12	116	2.37e-34	128
Msa1409770	MtrunA17_Chr7g0264641	50.909	110	53	1	26	134	12	121	4.14e-34	125
Msa1409770	MtrunA17_Chr2g0327351	56.000	100	43	1	26	124	12	111	4.58e-34	127
Msa1409770	MtrunA17_Chr5g0400821	54.286	105	47	1	26	129	12	116	5.76e-34	126
Msa1409770	MtrunA17_Chr5g0434931	53.846	104	48	0	26	129	35	138	6.56e-34	125
Msa1409770	MtrunA17_Chr3g0135311	55.238	105	46	1	26	129	12	116	7.26e-34	127
Msa1409770	MtrunA17_Chr5g0434831	54.286	105	48	0	26	130	7	111	1.27e-33	122
Msa1409770	MtrunA17_Chr4g0054391	51.240	121	46	2	26	133	12	132	2.04e-33	124
Msa1409770	MtrunA17_Chr5g0434911	52.885	104	49	0	26	129	21	124	5.38e-33	123
Msa1409770	MtrunA17_Chr7g0228991	46.923	130	67	1	3	130	4	133	5.90e-33	122
Msa1409770	MtrunA17_Chr5g0434841	53.333	105	49	0	26	130	20	124	1.08e-32	123
Msa1409770	MtrunA17_Chr8g0360111	55.446	101	45	0	26	126	25	125	1.09e-32	122
Msa1409770	MtrunA17_Chr5g0440781	35.754	179	82	4	27	204	13	159	1.24e-32	119
Msa1409770	MtrunA17_Chr6g0487491	49.573	117	50	2	22	129	8	124	1.40e-32	121
Msa1409770	MtrunA17_Chr7g0240821	52.336	107	51	0	30	136	5	111	1.88e-32	120
Msa1409770	MtrunA17_Chr7g0220341	52.336	107	49	1	26	130	25	131	3.11e-32	120
Msa1409770	MtrunA17_Chr5g0440761	48.544	103	52	1	27	128	13	115	3.73e-32	120
Msa1409770	MtrunA17_Chr5g0441141	48.544	103	52	1	27	128	13	115	3.87e-32	120
Msa1409770	MtrunA17_Chr4g0072751	56.000	100	43	1	26	124	12	111	1.30e-31	121
Msa1409770	MtrunA17_Chr7g0247131	60.759	79	31	0	58	136	10	88	7.89e-31	117
Msa1409770	MtrunA17_Chr3g0099141	50.000	86	43	0	22	107	36	121	2.58e-30	112
Msa1409770	MtrunA17_Chr5g0441131	42.593	108	61	1	25	131	8	115	1.47e-29	111
Msa1409770	MtrunA17_Chr4g0013361	41.441	111	64	1	22	131	6	116	2.00e-29	114
Msa1409770	MtrunA17_Chr2g0323321	57.831	83	35	0	24	106	9	91	4.90e-28	105
Msa1409770	MtrunA17_Chr7g0238631	46.667	105	55	1	25	129	110	213	1.27e-27	112
Msa1409770	MtrunA17_Chr6g0454921	41.964	112	64	1	19	130	6	116	1.60e-27	106
Msa1409770	MtrunA17_Chr4g0042611	56.790	81	35	0	22	102	8	88	2.07e-27	102
Msa1409770	MtrunA17_Chr2g0294811	52.941	85	40	0	22	106	8	92	2.81e-27	103
Msa1409770	MtrunA17_Chr5g0401731	40.678	118	68	2	19	136	7	122	6.81e-27	107
Msa1409770	MtrunA17_Chr5g0395221	57.143	77	33	0	26	102	12	88	3.58e-26	99.4
Msa1409770	MtrunA17_Chr8g0342511	56.962	79	34	0	23	101	9	87	5.81e-26	99.4
Msa1409770	MtrunA17_Chr4g0008551	42.718	103	58	1	28	130	38	139	8.97e-26	105
Msa1409770	MtrunA17_Chr8g0342531	54.321	81	37	0	23	103	9	89	1.03e-25	100
Msa1409770	MtrunA17_Chr4g0058991	40.984	122	68	3	9	129	191	309	1.29e-25	106
Msa1409770	MtrunA17_Chr3g0133601	41.748	103	59	1	28	130	37	138	1.54e-25	102
Msa1409770	MtrunA17_Chr3g0117511	43.137	102	57	1	28	129	183	283	4.74e-25	104
Msa1409770	MtrunA17_Chr5g0429661	43.269	104	58	1	26	129	120	222	8.01e-25	102
Msa1409770	MtrunA17_Chr4g0053431	40.777	103	60	1	28	130	5	106	1.72e-24	100
Msa1409770	MtrunA17_Chr6g0460661	43.396	106	59	1	28	133	16	120	2.16e-24	97.1
Msa1409770	MtrunA17_Chr5g0417621	37.086	151	81	3	18	163	119	260	2.80e-24	102
Msa1409770	MtrunA17_Chr3g0139671	40.952	105	61	1	25	129	82	185	3.29e-24	103
Msa1409770	MtrunA17_Chr3g0139671	34.000	100	64	2	28	126	33	131	3.61e-12	67.4
Msa1409770	MtrunA17_Chr1g0157731	40.952	105	61	1	25	129	88	191	3.94e-24	103
Msa1409770	MtrunA17_Chr1g0157731	34.000	100	64	2	28	126	39	137	6.15e-12	66.6
Msa1409770	MtrunA17_Chr7g0238651	36.986	146	83	3	28	166	7	150	1.25e-23	99.4
Msa1409770	MtrunA17_Chr8g0342461	51.220	82	39	1	23	103	9	90	2.20e-23	93.6
Msa1409770	MtrunA17_Chr6g0480581	30.263	228	121	7	28	245	4	203	2.84e-23	96.3
Msa1409770	MtrunA17_Chr7g0228531	32.314	229	131	8	28	248	220	432	3.60e-23	99.0
Msa1409770	MtrunA17_Chr8g0342471	51.220	82	39	1	23	103	9	90	7.56e-23	92.4
Msa1409770	MtrunA17_Chr4g0042501	36.029	136	78	2	28	163	105	231	2.77e-22	96.3
Msa1409770	MtrunA17_Chr5g0425591	44.578	83	45	1	27	108	10	92	2.95e-22	89.4
Msa1409770	MtrunA17_Chr5g0397841	44.444	99	54	1	24	122	106	203	1.88e-21	94.4
Msa1409770	MtrunA17_Chr5g0437321	40.594	101	59	1	22	122	13	112	3.98e-21	91.3
Msa1409770	MtrunA17_Chr8g0362231	38.686	137	80	3	9	143	1	135	7.36e-21	92.4
Msa1409770	MtrunA17_Chr7g0229101	58.571	70	29	0	58	127	4	73	1.08e-20	88.6
Msa1409770	MtrunA17_Chr3g0093811	50.633	79	39	0	58	136	14	92	1.32e-20	89.4
Msa1409770	MtrunA17_Chr6g0453751	46.154	91	40	2	26	107	20	110	1.60e-20	85.9
Msa1409770	MtrunA17_Chr7g0254261	40.000	105	62	1	28	132	89	192	3.15e-20	89.7
Msa1409770	MtrunA17_Chr3g0125801	39.130	115	69	1	28	142	16	129	3.84e-20	88.6
Msa1409770	MtrunA17_Chr6g0460671	38.655	119	69	2	15	133	89	203	4.21e-20	89.4
Msa1409770	MtrunA17_Chr5g0416341	41.584	101	58	1	31	131	29	128	6.19e-20	90.1
Msa1409770	MtrunA17_Chr5g0434901	60.294	68	27	0	60	127	7	74	8.64e-20	83.6
Msa1409770	MtrunA17_Chr7g0228401	41.748	103	55	2	39	141	290	387	5.39e-19	87.4
Msa1409770	MtrunA17_Chr7g0229131	50.000	82	36	1	59	140	5	81	9.06e-19	82.0
Msa1409770	MtrunA17_Chr7g0228481	31.280	211	122	8	28	232	220	413	9.25e-19	86.3
Msa1409770	MtrunA17_Chr7g0233061	39.175	97	56	2	28	124	180	273	7.57e-17	80.1
Msa1409770	MtrunA17_Chr1g0177901	34.722	144	80	4	38	177	4	137	3.26e-16	76.3
Msa1409770	MtrunA17_Chr1g0193901	42.857	84	46	2	26	107	11	94	2.31e-13	65.5
Msa1409770	MtrunA17_Chr1g0193891	42.857	84	46	2	26	107	11	94	2.31e-13	65.5
Msa1409770	MtrunA17_Chr1g0193871	42.857	84	46	2	26	107	11	94	2.31e-13	65.5
Msa1409770	MtrunA17_Chr1g0193881	42.857	84	46	2	26	107	11	94	2.31e-13	65.5
Msa1409770	MtrunA17_Chr5g0395231	31.933	119	71	2	102	216	15	127	8.97e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1409770	AT1G68320.1	64.179	201	58	1	23	223	16	202	1.37e-85	259
Msa1409770	AT1G25340.1	73.856	153	40	0	9	161	1	153	7.65e-82	249
Msa1409770	AT1G25340.2	71.242	153	39	1	9	161	1	148	2.72e-76	235
Msa1409770	AT1G25340.3	71.242	153	39	1	9	161	1	148	6.12e-76	235
Msa1409770	AT1G48000.1	68.310	142	45	0	25	166	31	172	6.11e-71	220
Msa1409770	AT5G49620.1	65.190	158	55	0	15	172	15	172	2.57e-66	211
Msa1409770	AT2G47190.1	60.000	145	58	0	21	165	15	159	8.08e-66	208
Msa1409770	AT5G40350.1	57.303	178	68	4	25	194	16	193	4.96e-65	204
Msa1409770	AT3G27810.1	73.504	117	31	0	23	139	17	133	1.36e-64	203
Msa1409770	AT3G06490.1	68.085	141	45	0	19	159	12	152	7.30e-63	202
Msa1409770	AT5G49620.2	59.884	172	55	1	15	172	15	186	1.72e-62	201
Msa1409770	AT3G01530.1	62.308	130	42	1	9	131	1	130	5.20e-57	183
Msa1409770	AT3G30210.1	53.179	173	61	4	26	186	27	191	1.00e-53	177
Msa1409770	AT4G13480.1	69.725	109	33	0	23	131	3	111	2.24e-52	173
Msa1409770	AT3G24310.1	68.807	109	34	0	23	131	15	123	4.56e-52	172
Msa1409770	AT5G59780.3	63.636	110	40	0	23	132	5	114	2.86e-49	164
Msa1409770	AT3G46130.1	65.094	106	37	0	27	132	10	115	2.06e-48	163
Msa1409770	AT3G02940.2	59.167	120	49	0	22	141	8	127	1.10e-46	160
Msa1409770	AT3G02940.1	59.167	120	49	0	22	141	8	127	2.20e-46	159
Msa1409770	AT3G02940.3	59.167	120	49	0	22	141	8	127	2.20e-46	159
Msa1409770	AT5G16770.4	59.167	120	49	0	22	141	8	127	5.05e-46	159
Msa1409770	AT5G16770.3	59.167	120	49	0	22	141	8	127	5.05e-46	159
Msa1409770	AT5G16770.1	59.167	120	49	0	22	141	8	127	8.87e-46	158
Msa1409770	AT5G16770.2	59.167	120	49	0	22	141	8	127	8.87e-46	158
Msa1409770	AT1G22640.1	56.098	123	54	0	22	144	8	130	6.62e-45	154
Msa1409770	AT5G54230.1	45.930	172	88	3	26	193	12	182	7.41e-45	155
Msa1409770	AT3G13540.1	55.833	120	53	0	26	145	23	142	2.56e-44	152
Msa1409770	AT5G40350.2	53.472	144	59	4	59	194	5	148	3.92e-44	149
Msa1409770	AT5G14750.1	55.932	118	50	1	14	129	2	119	4.06e-44	150
Msa1409770	AT3G27810.2	75.309	81	20	0	59	139	4	84	6.11e-44	149
Msa1409770	AT1G06180.1	44.944	178	93	3	26	203	12	184	1.09e-43	150
Msa1409770	AT4G21440.1	57.391	115	49	0	22	136	8	122	1.34e-43	153
Msa1409770	AT4G34990.1	56.349	126	55	0	22	147	8	133	1.76e-43	150
Msa1409770	AT2G31180.1	62.037	108	41	0	22	129	8	115	2.73e-43	149
Msa1409770	AT5G40330.1	57.407	108	46	0	22	129	8	115	2.82e-43	148
Msa1409770	AT4G05100.1	57.265	117	50	0	20	136	7	123	4.63e-43	151
Msa1409770	AT1G34670.1	59.130	115	47	0	22	136	8	122	5.55e-43	152
Msa1409770	AT1G09540.1	51.969	127	61	0	23	149	9	135	6.23e-43	152
Msa1409770	AT3G13890.2	57.944	107	45	0	23	129	9	115	8.58e-43	151
Msa1409770	AT3G53200.1	58.772	114	47	0	21	134	4	117	8.62e-43	147
Msa1409770	AT5G65230.1	56.410	117	51	0	20	136	6	122	1.35e-42	149
Msa1409770	AT5G10280.1	53.333	120	56	0	22	141	8	127	1.50e-42	150
Msa1409770	AT2G16720.1	53.968	126	58	0	22	147	8	133	1.52e-42	148
Msa1409770	AT2G47460.1	61.111	108	42	0	22	129	8	115	2.66e-42	150
Msa1409770	AT4G09460.1	54.762	126	57	0	22	147	8	133	3.00e-42	146
Msa1409770	AT3G23250.1	61.111	108	42	0	22	129	8	115	3.46e-42	147
Msa1409770	AT3G01140.2	59.459	111	45	0	26	136	12	122	3.51e-42	149
Msa1409770	AT4G38620.1	56.557	122	53	0	22	143	8	129	3.53e-42	147
Msa1409770	AT2G32460.2	55.660	106	47	0	26	131	6	111	3.53e-42	152
Msa1409770	AT3G11440.2	55.660	106	47	0	26	131	41	146	3.66e-42	152
Msa1409770	AT4G28110.1	56.522	115	50	0	22	136	8	122	3.84e-42	147
Msa1409770	AT2G32460.1	55.660	106	47	0	26	131	18	123	4.21e-42	152
Msa1409770	AT1G35515.1	57.391	115	49	0	22	136	8	122	5.12e-42	145
Msa1409770	AT3G27920.1	54.054	111	51	0	19	129	7	117	6.27e-42	145
Msa1409770	AT5G60890.1	52.419	124	59	0	22	145	8	131	7.16e-42	147
Msa1409770	AT5G07690.1	62.136	103	39	0	26	128	12	114	8.29e-42	148
Msa1409770	AT3G01140.1	59.459	111	45	0	26	136	55	165	8.30e-42	149
Msa1409770	AT1G57560.1	39.815	216	110	4	23	229	9	213	9.78e-42	147
Msa1409770	AT1G18570.1	54.839	124	56	0	20	143	7	130	1.03e-41	148
Msa1409770	AT5G61420.2	57.658	111	47	0	26	136	12	122	1.22e-41	148
Msa1409770	AT1G66230.1	52.459	122	58	0	26	147	12	133	1.23e-41	146
Msa1409770	AT5G14340.1	54.310	116	53	0	26	141	24	139	1.26e-41	145
Msa1409770	AT5G06100.1	55.556	108	48	0	24	131	30	137	1.27e-41	150
Msa1409770	AT5G26660.1	53.782	119	55	0	23	141	9	127	1.46e-41	147
Msa1409770	AT5G15310.2	58.559	111	46	0	26	136	12	122	1.72e-41	146
Msa1409770	AT5G15310.1	58.559	111	46	0	26	136	12	122	1.76e-41	147
Msa1409770	AT3G11440.3	55.660	106	47	0	26	131	41	146	1.88e-41	151
Msa1409770	AT3G11440.4	55.660	106	47	0	26	131	41	146	1.88e-41	151
Msa1409770	AT3G11440.1	55.660	106	47	0	26	131	41	146	1.88e-41	151
Msa1409770	AT4G22680.1	44.785	163	74	2	26	188	12	158	2.09e-41	145
Msa1409770	AT1G63910.1	56.364	110	48	0	23	132	9	118	2.12e-41	147
Msa1409770	AT5G16600.1	56.757	111	48	0	26	136	12	122	2.72e-41	146
Msa1409770	AT5G15310.4	58.559	111	46	0	26	136	12	122	3.56e-41	144
Msa1409770	AT5G07700.1	60.577	104	41	0	26	129	12	115	4.49e-41	146
Msa1409770	AT5G07700.2	60.577	104	41	0	26	129	12	115	4.49e-41	146
Msa1409770	AT5G06100.5	55.556	108	48	0	24	131	30	137	5.03e-41	150
Msa1409770	AT5G06100.2	55.556	108	48	0	24	131	30	137	5.03e-41	150
Msa1409770	AT5G06100.3	55.556	108	48	0	24	131	30	137	5.03e-41	150
Msa1409770	AT5G06100.4	55.556	108	48	0	24	131	30	137	5.03e-41	150
Msa1409770	AT1G57560.2	55.263	114	51	0	23	136	9	122	6.07e-41	144
Msa1409770	AT4G12350.1	44.379	169	84	3	26	193	12	171	6.08e-41	144
Msa1409770	AT5G49330.1	58.407	113	47	0	26	138	12	124	9.61e-41	145
Msa1409770	AT5G12870.1	49.219	128	58	1	6	133	5	125	1.21e-40	143
Msa1409770	AT3G62610.1	59.259	108	44	0	22	129	8	115	4.32e-40	144
Msa1409770	AT4G26930.1	50.833	120	54	1	18	132	6	125	5.13e-40	144
Msa1409770	AT3G61250.1	54.955	111	50	0	26	136	12	122	5.20e-40	142
Msa1409770	AT3G13890.1	53.448	116	45	1	23	129	9	124	8.48e-40	143
Msa1409770	AT4G17785.2	54.783	115	52	0	22	136	9	123	9.83e-40	143
Msa1409770	AT4G17785.1	54.783	115	52	0	22	136	9	123	1.02e-39	143
Msa1409770	AT4G01680.3	49.600	125	63	0	23	147	9	133	1.33e-39	139
Msa1409770	AT3G08500.1	54.386	114	52	0	18	131	22	135	1.40e-39	142
Msa1409770	AT4G01680.1	49.600	125	63	0	23	147	9	133	1.58e-39	142
Msa1409770	AT1G79180.1	54.955	111	50	0	22	132	10	120	2.58e-39	140
Msa1409770	AT5G35550.1	57.391	115	49	0	15	129	3	117	2.76e-39	139
Msa1409770	AT5G52600.1	55.556	117	48	1	13	129	3	115	2.80e-39	137
Msa1409770	AT5G55020.1	54.206	107	49	0	26	132	26	132	4.66e-39	144
Msa1409770	AT1G16490.1	52.033	123	55	2	22	140	10	132	5.40e-39	139
Msa1409770	AT1G56160.1	55.556	108	48	0	22	129	10	117	1.04e-38	139
Msa1409770	AT1G74080.1	59.223	103	42	0	26	128	12	114	1.06e-38	140
Msa1409770	AT2G26960.1	53.846	104	48	0	28	131	22	125	1.98e-38	141
Msa1409770	AT3G47600.1	53.211	109	51	0	26	134	12	120	2.74e-38	139
Msa1409770	AT1G74430.1	54.955	111	50	0	26	136	12	122	3.25e-38	137
Msa1409770	AT5G62320.1	48.120	133	62	1	22	147	9	141	3.42e-38	136
Msa1409770	AT3G12720.1	49.533	107	54	0	23	129	19	125	1.28e-37	136
Msa1409770	AT5G56110.1	52.174	115	55	0	22	136	8	122	1.51e-37	136
Msa1409770	AT5G62470.2	52.174	115	54	1	26	140	12	125	1.82e-37	137
Msa1409770	AT1G74650.1	50.427	117	58	0	22	138	8	124	2.27e-37	136
Msa1409770	AT1G08810.1	53.846	104	48	0	26	129	12	115	1.52e-36	132
Msa1409770	AT3G28910.1	51.786	112	54	0	26	137	12	123	2.14e-36	133
Msa1409770	AT3G46130.3	72.368	76	21	0	57	132	8	83	3.97e-36	130
Msa1409770	AT4G01680.2	45.255	137	63	1	23	147	9	145	4.57e-36	133
Msa1409770	AT3G28470.1	52.427	103	49	0	22	124	8	110	5.83e-36	132
Msa1409770	AT4G37780.1	54.286	105	47	1	26	129	12	116	9.05e-36	131
Msa1409770	AT5G59780.2	74.324	74	19	0	59	132	20	93	9.97e-36	129
Msa1409770	AT3G46130.4	74.324	74	19	0	59	132	20	93	1.29e-35	129
Msa1409770	AT5G62470.1	52.174	115	53	2	26	140	12	124	1.55e-35	132
Msa1409770	AT3G12820.1	52.778	108	51	0	22	129	10	117	2.27e-35	128
Msa1409770	AT5G23000.1	53.211	109	50	1	22	129	8	116	2.37e-35	130
Msa1409770	AT1G66370.1	57.692	104	44	0	26	129	8	111	1.39e-34	126
Msa1409770	AT1G18710.1	51.351	111	54	0	26	136	12	122	6.08e-34	125
Msa1409770	AT3G48920.1	50.000	108	54	0	21	128	13	120	7.54e-34	125
Msa1409770	AT2G36890.2	50.000	120	57	2	13	129	38	157	2.14e-33	125
Msa1409770	AT2G36890.1	54.286	105	47	1	26	129	12	116	2.94e-33	124
Msa1409770	AT5G57620.1	54.286	105	47	1	26	129	12	116	3.48e-33	125
Msa1409770	AT3G49690.1	54.286	105	47	1	26	129	12	116	4.62e-33	124
Msa1409770	AT1G79180.2	42.361	144	50	1	22	132	10	153	7.78e-33	124
Msa1409770	AT3G60460.1	44.737	114	62	1	22	134	7	120	1.01e-32	123
Msa1409770	AT5G52260.1	53.398	103	48	0	27	129	13	115	1.20e-32	122
Msa1409770	AT4G25560.1	51.456	103	50	0	27	129	11	113	1.94e-32	122
Msa1409770	AT5G65790.1	53.333	105	48	1	26	129	12	116	2.49e-32	124
Msa1409770	AT1G56650.1	59.615	104	42	0	26	129	8	111	3.21e-32	120
Msa1409770	AT1G66380.1	58.654	104	43	0	26	129	8	111	3.96e-32	117
Msa1409770	AT1G66390.1	59.615	104	42	0	26	129	8	111	1.87e-31	118
Msa1409770	AT3G53200.2	63.158	76	28	0	59	134	9	84	5.51e-30	113
Msa1409770	AT5G26660.2	56.627	83	36	0	59	141	14	96	2.29e-28	112
Msa1409770	AT2G26950.1	43.750	112	54	1	14	125	13	115	4.59e-27	109
Msa1409770	AT5G11050.1	31.452	248	130	7	28	253	105	334	5.34e-27	110
Msa1409770	AT5G14750.3	56.098	82	31	1	53	129	4	85	1.04e-26	103
Msa1409770	AT5G35550.2	62.338	77	29	0	53	129	44	120	1.07e-26	106
Msa1409770	AT3G27785.1	45.098	102	55	1	28	129	189	289	7.90e-26	107
Msa1409770	AT3G47600.2	57.895	76	32	0	59	134	39	114	1.08e-25	105
Msa1409770	AT2G23290.1	40.708	113	66	1	18	130	3	114	1.59e-25	104
Msa1409770	AT5G11510.3	42.857	105	59	1	25	129	78	181	2.66e-25	107
Msa1409770	AT5G11510.1	42.857	105	59	1	25	129	78	181	2.66e-25	107
Msa1409770	AT5G11510.4	42.857	105	59	1	25	129	78	181	2.66e-25	107
Msa1409770	AT3G09370.1	30.213	235	129	7	25	236	127	349	2.75e-25	105
Msa1409770	AT3G09370.2	30.213	235	129	7	25	236	132	354	2.80e-25	106
Msa1409770	AT3G09370.2	34.483	116	74	2	8	122	63	177	9.49e-11	63.2
Msa1409770	AT5G11510.5	42.857	105	59	1	25	129	78	181	3.28e-25	106
Msa1409770	AT5G11510.2	42.857	105	59	1	25	129	78	181	3.49e-25	106
Msa1409770	AT3G09370.3	41.509	106	61	1	25	130	140	244	3.50e-25	105
Msa1409770	AT3G09370.3	34.483	116	74	2	8	122	71	185	7.17e-11	63.5
Msa1409770	AT5G02320.1	42.857	105	59	1	25	129	124	227	5.87e-25	105
Msa1409770	AT5G02320.2	42.857	105	59	1	25	129	124	227	5.87e-25	105
Msa1409770	AT3G12820.2	61.765	68	26	0	62	129	2	69	6.89e-25	99.8
Msa1409770	AT5G58850.1	43.269	104	58	1	26	129	103	205	7.28e-25	104
Msa1409770	AT5G02320.3	42.857	105	59	1	25	129	64	167	9.79e-25	104
Msa1409770	AT4G18770.1	39.655	116	69	1	26	141	215	329	2.28e-24	102
Msa1409770	AT4G37260.1	40.000	115	65	2	28	142	13	123	1.71e-23	99.0
Msa1409770	AT3G09230.1	42.241	116	62	2	28	139	55	169	2.22e-23	99.8
Msa1409770	AT1G69560.2	38.525	122	73	2	11	132	107	226	3.70e-23	98.2
Msa1409770	AT1G69560.1	38.525	122	73	2	11	132	91	210	4.87e-23	97.8
Msa1409770	AT3G55730.1	40.566	106	62	1	28	133	56	160	7.02e-23	98.2
Msa1409770	AT4G32730.5	39.048	105	63	1	25	129	84	187	1.46e-22	99.0
Msa1409770	AT4G32730.5	33.000	100	65	2	28	126	35	133	1.31e-11	65.9
Msa1409770	AT4G32730.4	39.048	105	63	1	25	129	84	187	1.46e-22	99.0
Msa1409770	AT4G32730.4	33.000	100	65	2	28	126	35	133	1.31e-11	65.9
Msa1409770	AT4G32730.3	39.048	105	63	1	25	129	84	187	1.46e-22	99.0
Msa1409770	AT4G32730.3	33.000	100	65	2	28	126	35	133	1.31e-11	65.9
Msa1409770	AT4G32730.2	39.048	105	63	1	25	129	84	187	1.46e-22	99.0
Msa1409770	AT4G32730.2	33.000	100	65	2	28	126	35	133	1.31e-11	65.9
Msa1409770	AT4G32730.1	39.048	105	63	1	25	129	84	187	1.71e-22	98.6
Msa1409770	AT4G32730.1	33.000	100	65	2	28	126	35	133	1.49e-11	65.9
Msa1409770	AT5G17800.1	38.298	141	65	4	13	132	63	202	4.91e-22	94.7
Msa1409770	AT3G29020.1	40.952	105	61	1	28	132	65	168	5.98e-22	92.8
Msa1409770	AT3G50060.1	38.835	103	62	1	28	130	6	107	6.97e-22	94.0
Msa1409770	AT3G29020.2	40.952	105	61	1	28	132	67	170	1.17e-21	93.6
Msa1409770	AT2G37630.1	42.991	107	59	1	28	132	4	110	1.86e-21	94.0
Msa1409770	AT1G17950.1	42.857	105	59	1	28	132	5	108	2.15e-21	91.7
Msa1409770	AT5G67300.1	38.835	103	62	1	28	130	6	107	2.20e-21	92.8
Msa1409770	AT2G39880.1	41.176	102	59	1	28	129	50	150	2.40e-21	93.6
Msa1409770	AT5G40360.1	38.462	104	63	1	19	122	149	251	3.17e-21	93.2
Msa1409770	AT1G22640.3	54.795	73	33	0	72	144	1	73	3.48e-21	89.7
Msa1409770	AT1G26780.2	40.187	107	63	1	26	132	96	201	4.14e-21	92.8
Msa1409770	AT1G26780.1	40.187	107	63	1	26	132	96	201	5.69e-21	91.3
Msa1409770	AT1G73410.1	45.283	106	55	2	28	132	6	109	8.24e-21	90.1
Msa1409770	AT1G73410.2	45.283	106	55	2	28	132	6	109	1.88e-20	87.8
Msa1409770	AT5G59780.1	73.469	49	13	0	84	132	1	49	2.18e-20	87.0
Msa1409770	AT1G66380.2	57.692	78	33	0	26	103	8	85	2.88e-20	84.7
Msa1409770	AT3G46130.2	73.469	49	13	0	84	132	1	49	3.08e-20	87.0
Msa1409770	AT1G14350.2	33.333	177	97	8	31	195	28	195	6.38e-20	90.1
Msa1409770	AT1G14350.1	33.333	177	97	8	31	195	28	195	6.38e-20	90.1
Msa1409770	AT4G33450.1	39.252	107	64	1	26	132	17	122	6.50e-20	87.8
Msa1409770	AT1G66380.3	61.111	72	28	0	58	129	7	78	2.27e-19	82.4
Msa1409770	AT3G23250.2	63.793	58	21	0	72	129	1	58	2.48e-19	85.5
Msa1409770	AT2G25230.1	43.000	100	53	2	31	127	29	127	9.75e-19	84.0
Msa1409770	AT5G14750.4	58.621	58	24	0	72	129	1	58	1.42e-18	81.3
Msa1409770	AT5G14750.2	58.621	58	24	0	72	129	1	58	1.42e-18	81.3
Msa1409770	AT1G18960.1	34.211	114	72	2	28	141	10	120	2.02e-18	84.3
Msa1409770	AT2G02820.3	40.196	102	60	1	31	132	33	133	3.56e-18	84.3
Msa1409770	AT1G71030.1	40.860	93	54	1	50	142	5	96	4.85e-18	81.3
Msa1409770	AT2G02820.1	40.196	102	60	1	31	132	33	133	4.93e-18	84.7
Msa1409770	AT2G02820.2	40.196	102	60	1	31	132	33	133	5.05e-18	84.7
Msa1409770	AT1G71030.2	44.872	78	43	0	65	142	5	82	8.66e-18	80.1
Msa1409770	AT4G00540.2	38.739	111	64	2	26	133	101	210	1.47e-17	83.2
Msa1409770	AT4G00540.1	38.739	111	64	2	26	133	99	208	2.86e-17	82.4
Msa1409770	AT5G39700.1	38.679	106	64	1	27	132	55	159	6.12e-17	78.2
Msa1409770	AT5G40430.1	34.507	142	83	6	1	134	23	162	3.89e-15	74.3
Msa1409770	AT3G18100.1	33.065	124	76	2	27	144	545	667	1.19e-13	72.0
Msa1409770	AT3G18100.3	33.065	124	76	2	27	144	497	619	1.56e-13	71.6
Msa1409770	AT3G18100.4	33.065	124	76	2	27	144	384	506	2.13e-13	71.2
Msa1409770	AT3G18100.2	33.065	124	76	2	27	144	332	454	2.63e-13	70.9
Msa1409770	AT1G14350.3	32.609	138	73	7	70	195	23	152	2.45e-12	67.4
Msa1409770	AT1G14350.4	32.609	138	73	7	70	195	23	152	2.45e-12	67.4
Msa1409770	AT4G25560.2	54.348	46	21	0	84	129	2	47	2.82e-11	62.8

Find 62 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCACAAATATGAATAATTT+TGG	0.138581	tig0023553:-5477	Msa1409770:CDS
ACCTTCCAAGCCATAGTTAT+TGG	0.185410	tig0023553:+5182	None:intergenic
TTTCAAGTGGCTGTGAAAAT+TGG	0.228230	tig0023553:+5292	None:intergenic
TGACATAGTACTTAAATTAT+TGG	0.248289	tig0023553:+5347	None:intergenic
CAGCTTCAATAATCCTTCTT+TGG	0.273207	tig0023553:-5322	Msa1409770:CDS
AGAATGTATACCTGCACTTT+TGG	0.289850	tig0023553:+6332	None:intergenic
ATCTCATTATCTGTTCTTCC+TGG	0.311501	tig0023553:+5657	None:intergenic
TTCATTCCAAGTGGGGTAAC+AGG	0.359266	tig0023553:-6104	Msa1409770:intron
ACATTGTTCTCAAACACATT+TGG	0.382149	tig0023553:+5246	None:intergenic
ATAATGAGATAAAGAACTAT+TGG	0.389787	tig0023553:-5644	Msa1409770:CDS
ATAATTGTTCTTGTGGTGTA+AGG	0.395767	tig0023553:+6139	None:intergenic
ACAACTACAAAGAAAGAGTT+TGG	0.401219	tig0023553:-6465	Msa1409770:CDS
CGCCAACTTAACATTGAATC+TGG	0.420856	tig0023553:-5597	Msa1409770:CDS
ATTGATGATACCAATAACTA+TGG	0.431411	tig0023553:-5192	Msa1409770:CDS
CCTTGATCCAATGTCTTCAA+TGG	0.434110	tig0023553:-5154	Msa1409770:CDS
AGGTTCCCTCTCTTAATGTC+AGG	0.434595	tig0023553:+6159	None:intergenic
ATGCAGAAATTGTCTTGGAT+TGG	0.440218	tig0023553:+5213	None:intergenic
TAGGATGAAGGAGACATAGA+AGG	0.441002	tig0023553:+5402	None:intergenic
TTAATACCTGTTACCCCACT+TGG	0.454475	tig0023553:+6098	None:intergenic
TTTGAGAACAATGTTTATAA+CGG	0.461212	tig0023553:-5237	Msa1409770:CDS
CCATTGAAGACATTGGATCA+AGG	0.464340	tig0023553:+5154	None:intergenic
AAACTCTTTCTTTGTAGTTG+TGG	0.466467	tig0023553:+6467	None:intergenic
GCCAAGATTGCTTCAAAAGA+TGG	0.466885	tig0023553:-5535	Msa1409770:CDS
TACCAGATTCAATGTTAAGT+TGG	0.469384	tig0023553:+5595	None:intergenic
CATCAATGCAGAAATTGTCT+TGG	0.474689	tig0023553:+5208	None:intergenic
TAAGTTTCCATTGAAGACAT+TGG	0.474756	tig0023553:+5147	None:intergenic
TAATAGTACTTTGTGGAACA+TGG	0.484889	tig0023553:-5064	Msa1409770:CDS
TTCAAACTACAGAAAGTGGT+TGG	0.497556	tig0023553:-5104	Msa1409770:CDS
AGGATCAATAATTGTTCTTG+TGG	0.497994	tig0023553:+6132	None:intergenic
CTCGTCATGGTGAAGGTCGT+TGG	0.503722	tig0023553:-6365	Msa1409770:CDS
ACCAATAACTATGGCTTGGA+AGG	0.505112	tig0023553:-5183	Msa1409770:CDS
CCCACTTGGAATGAAGTTCA+AGG	0.506479	tig0023553:+6112	None:intergenic
CAAAGAAGGATTATTGAAGC+TGG	0.514926	tig0023553:+5323	None:intergenic
TTGAAACCTGACATTAAGAG+AGG	0.515821	tig0023553:-6165	Msa1409770:CDS
CCTCTCTGTGGATAGGATGA+AGG	0.522354	tig0023553:+5390	None:intergenic
AAAATTGCTCAGCATTTACC+AGG	0.522850	tig0023553:-5675	Msa1409770:CDS
GAGTGATCAAAGCTTGGAGA+AGG	0.525129	tig0023553:+5504	None:intergenic
ATTTCAGGATTGAAGAGGAC+CGG	0.528553	tig0023553:-6219	Msa1409770:intron
TGATACCAATAACTATGGCT+TGG	0.540717	tig0023553:-5187	Msa1409770:CDS
CCAACATTTCAGGATTGAAG+AGG	0.541450	tig0023553:-6224	Msa1409770:intron
TGGTTGGATGTTAGACAACA+TGG	0.544269	tig0023553:-5088	Msa1409770:CDS
ATGAGCTGAGAAGAGGACCT+TGG	0.544610	tig0023553:-6425	Msa1409770:CDS
TATGAATCCTCTCTGTGGAT+AGG	0.547305	tig0023553:+5383	None:intergenic
ACATGGGTAATAGTACTTTG+TGG	0.553914	tig0023553:-5071	Msa1409770:CDS
ATAGAAGAGTGATCAAAGCT+TGG	0.557051	tig0023553:+5498	None:intergenic
CTATCTTCTTCAAGAGTCCA+AGG	0.562500	tig0023553:+6408	None:intergenic
AATTGGAAGAAATCCAAAGA+AGG	0.563837	tig0023553:+5309	None:intergenic
TAAAGAACTATTGGAGAACA+AGG	0.573257	tig0023553:-5635	Msa1409770:CDS
GAAGAAAATGAGCTGAGAAG+AGG	0.586355	tig0023553:-6432	Msa1409770:CDS
TATATTGCTCGTCATGGTGA+AGG	0.594084	tig0023553:-6372	Msa1409770:CDS
CCTTGAACTTCATTCCAAGT+GGG	0.595465	tig0023553:-6112	Msa1409770:CDS
TCCTTGAACTTCATTCCAAG+TGG	0.606906	tig0023553:-6113	Msa1409770:CDS
AATATGTTAGCCAAAAGTGC+AGG	0.609544	tig0023553:-6342	Msa1409770:intron
TGAAACCTGACATTAAGAGA+GGG	0.622809	tig0023553:-6164	Msa1409770:CDS
CTTGAACTTCATTCCAAGTG+GGG	0.625251	tig0023553:-6111	Msa1409770:CDS
GGACATAGCTAATTCTCTAG+TGG	0.628032	tig0023553:+6488	None:intergenic
ATACACTATATTGCTCGTCA+TGG	0.635211	tig0023553:-6378	Msa1409770:CDS
AGTGATCAAAGCTTGGAGAA+GGG	0.637060	tig0023553:+5505	None:intergenic
GCATCTATGAATCCTCTCTG+TGG	0.672798	tig0023553:+5378	None:intergenic
GGTTGGATGTTAGACAACAT+GGG	0.675162	tig0023553:-5087	Msa1409770:CDS
AAAGAACTATTGGAGAACAA+GGG	0.692289	tig0023553:-5634	Msa1409770:CDS
CCTTCATCCTATCCACAGAG+AGG	0.705324	tig0023553:-5390	Msa1409770:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATTAACTAATATCTATT+TGG	+	tig0023553:5737-5756	None:intergenic	10.0%
!!	TTAATTAACTAATATCTATT+TGG	+	tig0023553:5737-5756	None:intergenic	10.0%
!!!	ATTATGTTTTTGTAAACTAT+AGG	+	tig0023553:5792-5811	None:intergenic	15.0%
!!	TAGTTTACAAAAACATAATT+AGG	-	tig0023553:5793-5812	Msa1409770:intron	15.0%
!!	TTTATGGTTTATTTGAAAAT+AGG	-	tig0023553:5844-5863	Msa1409770:intron	15.0%
!!!	ATCACAAATATGAATAATTT+TGG	-	tig0023553:6071-6090	Msa1409770:intron	15.0%
!!!	ATTATGTTTTTGTAAACTAT+AGG	+	tig0023553:5792-5811	None:intergenic	15.0%
!!	TAGTTTACAAAAACATAATT+AGG	-	tig0023553:5793-5812	Msa1409770:intron	15.0%
!!	TTTATGGTTTATTTGAAAAT+AGG	-	tig0023553:5844-5863	Msa1409770:intron	15.0%
!!!	ATCACAAATATGAATAATTT+TGG	-	tig0023553:6071-6090	Msa1409770:intron	15.0%
!!	TTATTCTTCTAACCTTAAAA+GGG	+	tig0023553:5249-5268	None:intergenic	20.0%
!!	ATTATTCTTCTAACCTTAAA+AGG	+	tig0023553:5250-5269	None:intergenic	20.0%
!!	TTGTTTATAATTAACCAACA+TGG	-	tig0023553:5497-5516	Msa1409770:CDS	20.0%
!!!	CAATGAATTGAACATTTTTA+TGG	-	tig0023553:5828-5847	Msa1409770:intron	20.0%
!!	ATAATGAGATAAAGAACTAT+TGG	-	tig0023553:5904-5923	Msa1409770:intron	20.0%
!!	TGACATAGTACTTAAATTAT+TGG	+	tig0023553:6204-6223	None:intergenic	20.0%
!!	TTTGAGAACAATGTTTATAA+CGG	-	tig0023553:6311-6330	Msa1409770:intron	20.0%
!!	TTATTCTTCTAACCTTAAAA+GGG	+	tig0023553:5249-5268	None:intergenic	20.0%
!!	ATTATTCTTCTAACCTTAAA+AGG	+	tig0023553:5250-5269	None:intergenic	20.0%
!!	TTGTTTATAATTAACCAACA+TGG	-	tig0023553:5497-5516	Msa1409770:CDS	20.0%
!!!	CAATGAATTGAACATTTTTA+TGG	-	tig0023553:5828-5847	Msa1409770:intron	20.0%
!!	ATAATGAGATAAAGAACTAT+TGG	-	tig0023553:5904-5923	Msa1409770:intron	20.0%
!!	TGACATAGTACTTAAATTAT+TGG	+	tig0023553:6204-6223	None:intergenic	20.0%
!!	TTTGAGAACAATGTTTATAA+CGG	-	tig0023553:6311-6330	Msa1409770:intron	20.0%
!!	ATTCTTTTTGTACCCTTTTA+AGG	-	tig0023553:5234-5253	Msa1409770:CDS	25.0%
!	TTAGTTAATTCCAACATTTC+AGG	-	tig0023553:5314-5333	Msa1409770:CDS	25.0%
!!	GACAATCCAAATACATTTTT+GGG	+	tig0023553:5526-5545	None:intergenic	25.0%
!!	AGACAATCCAAATACATTTT+TGG	+	tig0023553:5527-5546	None:intergenic	25.0%
!	ATGGTTTATTTGAAAATAGG+TGG	-	tig0023553:5847-5866	Msa1409770:intron	25.0%
!!	ATTGATGATACCAATAACTA+TGG	-	tig0023553:6356-6375	Msa1409770:CDS	25.0%
!!	ATTCTTTTTGTACCCTTTTA+AGG	-	tig0023553:5234-5253	Msa1409770:CDS	25.0%
!	TTAGTTAATTCCAACATTTC+AGG	-	tig0023553:5314-5333	Msa1409770:CDS	25.0%
!!	GACAATCCAAATACATTTTT+GGG	+	tig0023553:5526-5545	None:intergenic	25.0%
!!	AGACAATCCAAATACATTTT+TGG	+	tig0023553:5527-5546	None:intergenic	25.0%
!	ATGGTTTATTTGAAAATAGG+TGG	-	tig0023553:5847-5866	Msa1409770:intron	25.0%
!!	ATTGATGATACCAATAACTA+TGG	-	tig0023553:6356-6375	Msa1409770:CDS	25.0%
	AAACTCTTTCTTTGTAGTTG+TGG	+	tig0023553:5084-5103	None:intergenic	30.0%
	ACAACTACAAAGAAAGAGTT+TGG	-	tig0023553:5083-5102	Msa1409770:CDS	30.0%
	ATAATTGTTCTTGTGGTGTA+AGG	+	tig0023553:5412-5431	None:intergenic	30.0%
	AGGATCAATAATTGTTCTTG+TGG	+	tig0023553:5419-5438	None:intergenic	30.0%
	AAATGTATTTGGATTGTCTC+TGG	-	tig0023553:5528-5547	Msa1409770:CDS	30.0%
!	AATACATTAGTGGTCTTGAA+TGG	-	tig0023553:5576-5595	Msa1409770:CDS	30.0%
	AATGGTTCAGATTTCAAACT+TGG	+	tig0023553:5648-5667	None:intergenic	30.0%
	ACAAATTTCACGTATTCACA+TGG	+	tig0023553:5701-5720	None:intergenic	30.0%
	TAAAGAACTATTGGAGAACA+AGG	-	tig0023553:5913-5932	Msa1409770:intron	30.0%
	AAAGAACTATTGGAGAACAA+GGG	-	tig0023553:5914-5933	Msa1409770:intron	30.0%
	TACCAGATTCAATGTTAAGT+TGG	+	tig0023553:5956-5975	None:intergenic	30.0%
!	TTGATGCTGTTAAGTGTTTT+TGG	-	tig0023553:5988-6007	Msa1409770:intron	30.0%
	AATTGGAAGAAATCCAAAGA+AGG	+	tig0023553:6242-6261	None:intergenic	30.0%
!!!	GAGTTTTCTGAAATTTCAAG+TGG	+	tig0023553:6272-6291	None:intergenic	30.0%
	ACATTGTTCTCAAACACATT+TGG	+	tig0023553:6305-6324	None:intergenic	30.0%
	TAAGTTTCCATTGAAGACAT+TGG	+	tig0023553:6404-6423	None:intergenic	30.0%
!	GATTTTCAAACTACAGAAAG+TGG	-	tig0023553:6440-6459	Msa1409770:CDS	30.0%
	TAATAGTACTTTGTGGAACA+TGG	-	tig0023553:6484-6503	Msa1409770:CDS	30.0%
	AAACTCTTTCTTTGTAGTTG+TGG	+	tig0023553:5084-5103	None:intergenic	30.0%
	ACAACTACAAAGAAAGAGTT+TGG	-	tig0023553:5083-5102	Msa1409770:CDS	30.0%
	ATAATTGTTCTTGTGGTGTA+AGG	+	tig0023553:5412-5431	None:intergenic	30.0%
	AGGATCAATAATTGTTCTTG+TGG	+	tig0023553:5419-5438	None:intergenic	30.0%
	AAATGTATTTGGATTGTCTC+TGG	-	tig0023553:5528-5547	Msa1409770:CDS	30.0%
!	AATACATTAGTGGTCTTGAA+TGG	-	tig0023553:5576-5595	Msa1409770:CDS	30.0%
	AATGGTTCAGATTTCAAACT+TGG	+	tig0023553:5648-5667	None:intergenic	30.0%
	ACAAATTTCACGTATTCACA+TGG	+	tig0023553:5701-5720	None:intergenic	30.0%
	TAAAGAACTATTGGAGAACA+AGG	-	tig0023553:5913-5932	Msa1409770:intron	30.0%
	AAAGAACTATTGGAGAACAA+GGG	-	tig0023553:5914-5933	Msa1409770:intron	30.0%
	TACCAGATTCAATGTTAAGT+TGG	+	tig0023553:5956-5975	None:intergenic	30.0%
!	TTGATGCTGTTAAGTGTTTT+TGG	-	tig0023553:5988-6007	Msa1409770:intron	30.0%
	AATTGGAAGAAATCCAAAGA+AGG	+	tig0023553:6242-6261	None:intergenic	30.0%
!!!	GAGTTTTCTGAAATTTCAAG+TGG	+	tig0023553:6272-6291	None:intergenic	30.0%
	ACATTGTTCTCAAACACATT+TGG	+	tig0023553:6305-6324	None:intergenic	30.0%
	TAAGTTTCCATTGAAGACAT+TGG	+	tig0023553:6404-6423	None:intergenic	30.0%
!	GATTTTCAAACTACAGAAAG+TGG	-	tig0023553:6440-6459	Msa1409770:CDS	30.0%
	TAATAGTACTTTGTGGAACA+TGG	-	tig0023553:6484-6503	Msa1409770:CDS	30.0%
	ATACACTATATTGCTCGTCA+TGG	-	tig0023553:5170-5189	Msa1409770:CDS	35.0%
!	AATATGTTAGCCAAAAGTGC+AGG	-	tig0023553:5206-5225	Msa1409770:CDS	35.0%
!	AGAATGTATACCTGCACTTT+TGG	+	tig0023553:5219-5238	None:intergenic	35.0%
	TTGAAACCTGACATTAAGAG+AGG	-	tig0023553:5383-5402	Msa1409770:CDS	35.0%
	TGAAACCTGACATTAAGAGA+GGG	-	tig0023553:5384-5403	Msa1409770:CDS	35.0%
	TGGTGACCCAAAAATGTATT+TGG	-	tig0023553:5517-5536	Msa1409770:CDS	35.0%
	AAAATTGCTCAGCATTTACC+AGG	-	tig0023553:5873-5892	Msa1409770:intron	35.0%
	ATCTCATTATCTGTTCTTCC+TGG	+	tig0023553:5894-5913	None:intergenic	35.0%
!!!	TCCATCTTTTGAAGCAATCT+TGG	+	tig0023553:6017-6036	None:intergenic	35.0%
	ATAGAAGAGTGATCAAAGCT+TGG	+	tig0023553:6053-6072	None:intergenic	35.0%
	CAAAGAAGGATTATTGAAGC+TGG	+	tig0023553:6228-6247	None:intergenic	35.0%
	CAGCTTCAATAATCCTTCTT+TGG	-	tig0023553:6226-6245	Msa1409770:intron	35.0%
!	TTTCAAGTGGCTGTGAAAAT+TGG	+	tig0023553:6259-6278	None:intergenic	35.0%
	ATGCAGAAATTGTCTTGGAT+TGG	+	tig0023553:6338-6357	None:intergenic	35.0%
	CATCAATGCAGAAATTGTCT+TGG	+	tig0023553:6343-6362	None:intergenic	35.0%
	TGATACCAATAACTATGGCT+TGG	-	tig0023553:6361-6380	Msa1409770:CDS	35.0%
	TTCAAACTACAGAAAGTGGT+TGG	-	tig0023553:6444-6463	Msa1409770:CDS	35.0%
	ACATGGGTAATAGTACTTTG+TGG	-	tig0023553:6477-6496	Msa1409770:CDS	35.0%
	ATACACTATATTGCTCGTCA+TGG	-	tig0023553:5170-5189	Msa1409770:CDS	35.0%
!	AATATGTTAGCCAAAAGTGC+AGG	-	tig0023553:5206-5225	Msa1409770:CDS	35.0%
!	AGAATGTATACCTGCACTTT+TGG	+	tig0023553:5219-5238	None:intergenic	35.0%
	TTGAAACCTGACATTAAGAG+AGG	-	tig0023553:5383-5402	Msa1409770:CDS	35.0%
	TGAAACCTGACATTAAGAGA+GGG	-	tig0023553:5384-5403	Msa1409770:CDS	35.0%
	TGGTGACCCAAAAATGTATT+TGG	-	tig0023553:5517-5536	Msa1409770:CDS	35.0%
	AAAATTGCTCAGCATTTACC+AGG	-	tig0023553:5873-5892	Msa1409770:intron	35.0%
	ATCTCATTATCTGTTCTTCC+TGG	+	tig0023553:5894-5913	None:intergenic	35.0%
!!!	TCCATCTTTTGAAGCAATCT+TGG	+	tig0023553:6017-6036	None:intergenic	35.0%
	ATAGAAGAGTGATCAAAGCT+TGG	+	tig0023553:6053-6072	None:intergenic	35.0%
	CAAAGAAGGATTATTGAAGC+TGG	+	tig0023553:6228-6247	None:intergenic	35.0%
	CAGCTTCAATAATCCTTCTT+TGG	-	tig0023553:6226-6245	Msa1409770:intron	35.0%
!	TTTCAAGTGGCTGTGAAAAT+TGG	+	tig0023553:6259-6278	None:intergenic	35.0%
	ATGCAGAAATTGTCTTGGAT+TGG	+	tig0023553:6338-6357	None:intergenic	35.0%
	CATCAATGCAGAAATTGTCT+TGG	+	tig0023553:6343-6362	None:intergenic	35.0%
	TGATACCAATAACTATGGCT+TGG	-	tig0023553:6361-6380	Msa1409770:CDS	35.0%
	TTCAAACTACAGAAAGTGGT+TGG	-	tig0023553:6444-6463	Msa1409770:CDS	35.0%
	ACATGGGTAATAGTACTTTG+TGG	-	tig0023553:6477-6496	Msa1409770:CDS	35.0%
	GGACATAGCTAATTCTCTAG+TGG	+	tig0023553:5063-5082	None:intergenic	40.0%
	GAAGAAAATGAGCTGAGAAG+AGG	-	tig0023553:5116-5135	Msa1409770:CDS	40.0%
	CTATCTTCTTCAAGAGTCCA+AGG	+	tig0023553:5143-5162	None:intergenic	40.0%
	TATATTGCTCGTCATGGTGA+AGG	-	tig0023553:5176-5195	Msa1409770:CDS	40.0%
	CCTCTTCAATCCTGAAATGT+TGG	+	tig0023553:5327-5346	None:intergenic	40.0%
	CCAACATTTCAGGATTGAAG+AGG	-	tig0023553:5324-5343	Msa1409770:CDS	40.0%
	ATTTCAGGATTGAAGAGGAC+CGG	-	tig0023553:5329-5348	Msa1409770:CDS	40.0%
	TCCTTGAACTTCATTCCAAG+TGG	-	tig0023553:5435-5454	Msa1409770:CDS	40.0%
	CCTTGAACTTCATTCCAAGT+GGG	-	tig0023553:5436-5455	Msa1409770:CDS	40.0%
	CTTGAACTTCATTCCAAGTG+GGG	-	tig0023553:5437-5456	Msa1409770:CDS	40.0%
	TTAATACCTGTTACCCCACT+TGG	+	tig0023553:5453-5472	None:intergenic	40.0%
!!!	ACATTTTTGGGTCACCATGT+TGG	+	tig0023553:5514-5533	None:intergenic	40.0%
	TCATCAATCGCACATTCACA+CGG	-	tig0023553:5551-5570	Msa1409770:CDS	40.0%
	TCACACGGTCAATACATTAG+TGG	-	tig0023553:5566-5585	Msa1409770:CDS	40.0%
	GTATTCACATGGTCAACACA+CGG	+	tig0023553:5690-5709	None:intergenic	40.0%
	CGCCAACTTAACATTGAATC+TGG	-	tig0023553:5951-5970	Msa1409770:intron	40.0%
	GCCAAGATTGCTTCAAAAGA+TGG	-	tig0023553:6013-6032	Msa1409770:intron	40.0%
	AGTGATCAAAGCTTGGAGAA+GGG	+	tig0023553:6046-6065	None:intergenic	40.0%
	TAGGATGAAGGAGACATAGA+AGG	+	tig0023553:6149-6168	None:intergenic	40.0%
	TATGAATCCTCTCTGTGGAT+AGG	+	tig0023553:6168-6187	None:intergenic	40.0%
!	ACCAATAACTATGGCTTGGA+AGG	-	tig0023553:6365-6384	Msa1409770:CDS	40.0%
	ACCTTCCAAGCCATAGTTAT+TGG	+	tig0023553:6369-6388	None:intergenic	40.0%
	CCATTGAAGACATTGGATCA+AGG	+	tig0023553:6397-6416	None:intergenic	40.0%
	CCTTGATCCAATGTCTTCAA+TGG	-	tig0023553:6394-6413	Msa1409770:CDS	40.0%
	TGGTTGGATGTTAGACAACA+TGG	-	tig0023553:6460-6479	Msa1409770:CDS	40.0%
	GGTTGGATGTTAGACAACAT+GGG	-	tig0023553:6461-6480	Msa1409770:CDS	40.0%
	GGACATAGCTAATTCTCTAG+TGG	+	tig0023553:5063-5082	None:intergenic	40.0%
	GAAGAAAATGAGCTGAGAAG+AGG	-	tig0023553:5116-5135	Msa1409770:CDS	40.0%
	CTATCTTCTTCAAGAGTCCA+AGG	+	tig0023553:5143-5162	None:intergenic	40.0%
	TATATTGCTCGTCATGGTGA+AGG	-	tig0023553:5176-5195	Msa1409770:CDS	40.0%
	CCTCTTCAATCCTGAAATGT+TGG	+	tig0023553:5327-5346	None:intergenic	40.0%
	CCAACATTTCAGGATTGAAG+AGG	-	tig0023553:5324-5343	Msa1409770:CDS	40.0%
	ATTTCAGGATTGAAGAGGAC+CGG	-	tig0023553:5329-5348	Msa1409770:CDS	40.0%
	TCCTTGAACTTCATTCCAAG+TGG	-	tig0023553:5435-5454	Msa1409770:CDS	40.0%
	CCTTGAACTTCATTCCAAGT+GGG	-	tig0023553:5436-5455	Msa1409770:CDS	40.0%
	CTTGAACTTCATTCCAAGTG+GGG	-	tig0023553:5437-5456	Msa1409770:CDS	40.0%
	TTAATACCTGTTACCCCACT+TGG	+	tig0023553:5453-5472	None:intergenic	40.0%
!!!	ACATTTTTGGGTCACCATGT+TGG	+	tig0023553:5514-5533	None:intergenic	40.0%
	TCATCAATCGCACATTCACA+CGG	-	tig0023553:5551-5570	Msa1409770:CDS	40.0%
	TCACACGGTCAATACATTAG+TGG	-	tig0023553:5566-5585	Msa1409770:CDS	40.0%
	GTATTCACATGGTCAACACA+CGG	+	tig0023553:5690-5709	None:intergenic	40.0%
	CGCCAACTTAACATTGAATC+TGG	-	tig0023553:5951-5970	Msa1409770:intron	40.0%
	GCCAAGATTGCTTCAAAAGA+TGG	-	tig0023553:6013-6032	Msa1409770:intron	40.0%
	AGTGATCAAAGCTTGGAGAA+GGG	+	tig0023553:6046-6065	None:intergenic	40.0%
	TAGGATGAAGGAGACATAGA+AGG	+	tig0023553:6149-6168	None:intergenic	40.0%
	TATGAATCCTCTCTGTGGAT+AGG	+	tig0023553:6168-6187	None:intergenic	40.0%
!	ACCAATAACTATGGCTTGGA+AGG	-	tig0023553:6365-6384	Msa1409770:CDS	40.0%
	ACCTTCCAAGCCATAGTTAT+TGG	+	tig0023553:6369-6388	None:intergenic	40.0%
	CCATTGAAGACATTGGATCA+AGG	+	tig0023553:6397-6416	None:intergenic	40.0%
	CCTTGATCCAATGTCTTCAA+TGG	-	tig0023553:6394-6413	Msa1409770:CDS	40.0%
	TGGTTGGATGTTAGACAACA+TGG	-	tig0023553:6460-6479	Msa1409770:CDS	40.0%
	GGTTGGATGTTAGACAACAT+GGG	-	tig0023553:6461-6480	Msa1409770:CDS	40.0%
!!	TCTGAGTCTGCAGCTTTTTC+CGG	+	tig0023553:5351-5370	None:intergenic	45.0%
	GAAAAAGCTGCAGACTCAGA+TGG	-	tig0023553:5351-5370	Msa1409770:CDS	45.0%
	AGGTTCCCTCTCTTAATGTC+AGG	+	tig0023553:5392-5411	None:intergenic	45.0%
	CCCACTTGGAATGAAGTTCA+AGG	+	tig0023553:5439-5458	None:intergenic	45.0%
	TTCATTCCAAGTGGGGTAAC+AGG	-	tig0023553:5444-5463	Msa1409770:CDS	45.0%
	GGTCGTTAGATCGGATCAAA+TGG	+	tig0023553:5666-5685	None:intergenic	45.0%
	GAGTGATCAAAGCTTGGAGA+AGG	+	tig0023553:6047-6066	None:intergenic	45.0%
	GCATCTATGAATCCTCTCTG+TGG	+	tig0023553:6173-6192	None:intergenic	45.0%
!!	TCTGAGTCTGCAGCTTTTTC+CGG	+	tig0023553:5351-5370	None:intergenic	45.0%
	GAAAAAGCTGCAGACTCAGA+TGG	-	tig0023553:5351-5370	Msa1409770:CDS	45.0%
	AGGTTCCCTCTCTTAATGTC+AGG	+	tig0023553:5392-5411	None:intergenic	45.0%
	CCCACTTGGAATGAAGTTCA+AGG	+	tig0023553:5439-5458	None:intergenic	45.0%
	TTCATTCCAAGTGGGGTAAC+AGG	-	tig0023553:5444-5463	Msa1409770:CDS	45.0%
	GGTCGTTAGATCGGATCAAA+TGG	+	tig0023553:5666-5685	None:intergenic	45.0%
	GAGTGATCAAAGCTTGGAGA+AGG	+	tig0023553:6047-6066	None:intergenic	45.0%
	GCATCTATGAATCCTCTCTG+TGG	+	tig0023553:6173-6192	None:intergenic	45.0%
	ATGAGCTGAGAAGAGGACCT+TGG	-	tig0023553:5123-5142	Msa1409770:CDS	50.0%
	ACACACGGTGGTCGTTAGAT+CGG	+	tig0023553:5675-5694	None:intergenic	50.0%
	TTCACATGGTCAACACACGG+TGG	+	tig0023553:5687-5706	None:intergenic	50.0%
	CCTCTCTGTGGATAGGATGA+AGG	+	tig0023553:6161-6180	None:intergenic	50.0%
	CCTTCATCCTATCCACAGAG+AGG	-	tig0023553:6158-6177	Msa1409770:CDS	50.0%
	ATGAGCTGAGAAGAGGACCT+TGG	-	tig0023553:5123-5142	Msa1409770:CDS	50.0%
	ACACACGGTGGTCGTTAGAT+CGG	+	tig0023553:5675-5694	None:intergenic	50.0%
	TTCACATGGTCAACACACGG+TGG	+	tig0023553:5687-5706	None:intergenic	50.0%
	CCTCTCTGTGGATAGGATGA+AGG	+	tig0023553:6161-6180	None:intergenic	50.0%
	CCTTCATCCTATCCACAGAG+AGG	-	tig0023553:6158-6177	Msa1409770:CDS	50.0%
	CTCGTCATGGTGAAGGTCGT+TGG	-	tig0023553:5183-5202	Msa1409770:CDS	55.0%
	CTCGTCATGGTGAAGGTCGT+TGG	-	tig0023553:5183-5202	Msa1409770:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
tig0023553	gene	5053	6517	5053	ID=Msa1409770;Name=Msa1409770
tig0023553	mRNA	5053	6517	5053	ID=Msa1409770-mRNA-1;Parent=Msa1409770;Name=Msa1409770-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0\|0\|0\|1\|1\|1\|3\|0\|318
tig0023553	exon	6343	6517	6343	ID=Msa1409770-mRNA-1:exon:26235;Parent=Msa1409770-mRNA-1
tig0023553	exon	6105	6234	6105	ID=Msa1409770-mRNA-1:exon:26234;Parent=Msa1409770-mRNA-1
tig0023553	exon	5053	5704	5053	ID=Msa1409770-mRNA-1:exon:26233;Parent=Msa1409770-mRNA-1
tig0023553	CDS	6343	6517	6343	ID=Msa1409770-mRNA-1:cds;Parent=Msa1409770-mRNA-1
tig0023553	CDS	6105	6234	6105	ID=Msa1409770-mRNA-1:cds;Parent=Msa1409770-mRNA-1
tig0023553	CDS	5053	5704	5053	ID=Msa1409770-mRNA-1:cds;Parent=Msa1409770-mRNA-1

Gene Sequence

>Msa1409770

ATGAACACCACTAGAGAATTAGCTATGTCCACAACTACAAAGAAAGAGTTTGGTAATTCTAAAGAAGAAAATGAGCTGAGAAGAGGACCTTGGACTCTTGAAGAAGATAGCTTACTAATACACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACCGGAAAAAGCTGCAGACTCAGATGGTTGAATTACTTGAAACCTGACATTAAGAGAGGGAACCTTACACCACAAGAACAATTATTGATCCTTGAACTTCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATTTACCAGGAAGAACAGATAATGAGATAAAGAACTATTGGAGAACAAGGGTGCAAAAACAAGCACGCCAACTTAACATTGAATCTGGTAGCAAGAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTGCTTCAAAAGATGGAACAGAACCCTTCTCCAAGCTTTGATCACTCTTCTATCACAAATATGAATAATTTTGGTAACTCTATTGAAGCTTCAACTAGTAATTCAATGTCAACAAGCTTCAATATTCCTTCTATGTCTCCTTCATCCTATCCACAGAGAGGATTCATAGATGCTTCAAGTGCCAATAATTTAAGTACTATGTCAGCCAGCTTCAATAATCCTTCTTTGGATTTCTTCCAATTTTCACAGCCACTTGAAATTTCAGAAAACTCAAAAAGTGCTCCAAATGTGTTTGAGAACAATGTTTATAACGGTCCAATCCAAGACAATTTCTGCATTGATGATACCAATAACTATGGCTTGGAAGGTCTAAACCTTGATCCAATGTCTTCAATGGAAACTTATGACTTTTCACAGTTTGATTTTCAAACTACAGAAAGTGGTTGGATGTTAGACAACATGGGTAATAGTACTTTGTGGAACATGGATTCTATGTGA

Protein sequence

>Msa1409770

MNTTRELAMSTTTKKEFGNSKEENELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNPSPSFDHSSITNMNNFGNSIEASTSNSMSTSFNIPSMSPSSYPQRGFIDASSANNLSTMSASFNNPSLDFFQFSQPLEISENSKSAPNVFENNVYNGPIQDNFCIDDTNNYGLEGLNLDPMSSMETYDFSQFDFQTTESGWMLDNMGNSTLWNMDSM*