Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419860 | sp|P32138|SQASE_ECOLI | 34.542 | 579 | 264 | 13 | 277 | 767 | 115 | 666 | 1.62e-98 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419860 | G7KQR9 | 87.141 | 871 | 25 | 2 | 1 | 784 | 1 | 871 | 0.0 | 1536 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1383480 | Msa1419860 | 0.800003 | 1.766709e-48 | -8.615850e-47 |
| Msa1236070 | Msa1419860 | -0.803928 | 2.758325e-49 | -8.615850e-47 |
| Msa1310660 | Msa1419860 | 0.828582 | 8.298980e-55 | -8.615850e-47 |
| Msa0388710 | Msa1419860 | 0.875555 | 2.809434e-68 | -8.615850e-47 |
| Msa0416320 | Msa1419860 | 0.800374 | 1.485300e-48 | -8.615850e-47 |
| Msa0362060 | Msa1419860 | 0.812243 | 4.675428e-51 | -8.615850e-47 |
| Msa1122170 | Msa1419860 | 0.830447 | 2.922433e-55 | -8.615850e-47 |
| Msa1160580 | Msa1419860 | 0.867162 | 1.676376e-65 | -8.615850e-47 |
| Msa1182640 | Msa1419860 | 0.813384 | 2.631060e-51 | -8.615850e-47 |
| Msa0598560 | Msa1419860 | 0.820511 | 6.601141e-53 | -8.615850e-47 |
| Msa0866800 | Msa1419860 | 0.802766 | 4.800906e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419860 | MtrunA17_Chr7g0256191 | 87.141 | 871 | 25 | 2 | 1 | 784 | 1 | 871 | 0.0 | 1536 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419860 | AT3G45940.1 | 22.200 | 509 | 292 | 22 | 319 | 769 | 245 | 707 | 6.16e-15 | 79.7 |
| Msa1419860 | AT1G68560.1 | 21.846 | 531 | 292 | 21 | 331 | 769 | 256 | 755 | 2.89e-14 | 77.4 |
Find 194 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATCTCTCTGTTGATTT+TGG | 0.067059 | tig0024731:+32185 | None:intergenic |
| ATTAAGGTTGGTTCCATTAT+TGG | 0.180842 | tig0024731:-31026 | Msa1419860:CDS |
| TTACTTAGCAGTGGAATTTC+TGG | 0.181038 | tig0024731:-31988 | Msa1419860:CDS |
| CCTACATCGAAGGCAGTATT+TGG | 0.182366 | tig0024731:+32993 | None:intergenic |
| ATTAGGATTATCAATGAATT+TGG | 0.182685 | tig0024731:-35086 | Msa1419860:CDS |
| GTAGCAGTTGGCTGCATATT+TGG | 0.192060 | tig0024731:-31121 | Msa1419860:CDS |
| TCCAATGTCACTGTGATTAA+AGG | 0.201406 | tig0024731:+31960 | None:intergenic |
| CTTGAGTTATCAACAATTCT+TGG | 0.231983 | tig0024731:-31222 | Msa1419860:CDS |
| AGAGGATGGATGGCTGATTT+TGG | 0.243979 | tig0024731:-32894 | Msa1419860:CDS |
| TTATCCTGCTGTATTTATTA+AGG | 0.245649 | tig0024731:-31042 | Msa1419860:CDS |
| CAAACCCTATTGAACTCTTT+TGG | 0.248131 | tig0024731:+34630 | None:intergenic |
| GCTCACAACTTTGGTGGAAT+TGG | 0.248740 | tig0024731:-33418 | Msa1419860:CDS |
| ACGTTCCTGTCTCAGGATTT+TGG | 0.253778 | tig0024731:-33606 | Msa1419860:CDS |
| CAATGAATTTGGTGATCATT+TGG | 0.279266 | tig0024731:-35075 | Msa1419860:CDS |
| CTTCCAGAGTGGATAATATC+TGG | 0.284214 | tig0024731:-33697 | Msa1419860:CDS |
| CAATAATGGGAATGCATATA+TGG | 0.288175 | tig0024731:-33018 | Msa1419860:CDS |
| CTCAGAAAACTAGACCAATT+TGG | 0.288899 | tig0024731:-35238 | Msa1419860:CDS |
| TTATGAACATGTTCATCATT+AGG | 0.289122 | tig0024731:+31245 | None:intergenic |
| GGAATATGAAGTTGAAGATT+TGG | 0.289491 | tig0024731:-35054 | Msa1419860:CDS |
| TTGTAAATTCCAGAAGCTTC+TGG | 0.290819 | tig0024731:+34780 | None:intergenic |
| CCGATGCTGTACGCCGTGTT+TGG | 0.296022 | tig0024731:-33648 | Msa1419860:CDS |
| GAATATAGAACCGCGTCAAC+GGG | 0.305740 | tig0024731:+32861 | None:intergenic |
| GTTGACGCGGTTCTATATTC+AGG | 0.313245 | tig0024731:-32858 | Msa1419860:intron |
| CTTCTTCTATATTTAACTAT+AGG | 0.313844 | tig0024731:+31916 | None:intergenic |
| CCTGAGATTGTAGACCAAAT+TGG | 0.314785 | tig0024731:+35224 | None:intergenic |
| CAAAACCAAAAGAGTTCAAT+AGG | 0.317943 | tig0024731:-34635 | Msa1419860:CDS |
| TATGAACATGTTCATCATTA+GGG | 0.321975 | tig0024731:+31246 | None:intergenic |
| ATTTGTTTATGCAAGGTATT+GGG | 0.331560 | tig0024731:-34892 | Msa1419860:CDS |
| CATTTGTTTATGCAAGGTAT+TGG | 0.334799 | tig0024731:-34893 | Msa1419860:CDS |
| TTTCTGTGAAATGTTCAATT+AGG | 0.337554 | tig0024731:+33740 | None:intergenic |
| AATAGAGAGCCTTGGACATT+AGG | 0.338490 | tig0024731:+35371 | None:intergenic |
| CCATGATTCACTTCCTTGTT+CGG | 0.340613 | tig0024731:+31082 | None:intergenic |
| ATAACAGATATCCTGAACTA+TGG | 0.342076 | tig0024731:-32209 | Msa1419860:CDS |
| TTCTTTCCTTTGTCAAGAAC+AGG | 0.344396 | tig0024731:+31176 | None:intergenic |
| CGCTGGAGCTTGCAGATATA+CGG | 0.346220 | tig0024731:-33808 | Msa1419860:intron |
| CTCACAACTTTGGTGGAATT+GGG | 0.356672 | tig0024731:-33417 | Msa1419860:CDS |
| CCTTGTTCTTGAACTAAGAT+AGG | 0.364449 | tig0024731:+34522 | None:intergenic |
| AGTGGATGAACAAAGATATT+GGG | 0.364811 | tig0024731:-33393 | Msa1419860:CDS |
| CAAAAGAGTTCAATAGGGTT+TGG | 0.366276 | tig0024731:-34629 | Msa1419860:CDS |
| TTACAAACTATGTTAAATAT+CGG | 0.370492 | tig0024731:+30760 | None:intergenic |
| GGCAAAACAGTTGGACATAT+TGG | 0.371658 | tig0024731:-33048 | Msa1419860:CDS |
| AAGTGGATGAACAAAGATAT+TGG | 0.375947 | tig0024731:-33394 | Msa1419860:CDS |
| CAAACAGATTCTACTTGAAA+TGG | 0.378043 | tig0024731:-32931 | Msa1419860:CDS |
| CTTTCTTGGTCCACAATCAA+TGG | 0.379909 | tig0024731:-35287 | Msa1419860:CDS |
| TATCTGTTATGAGCTGAAAT+AGG | 0.380347 | tig0024731:+32222 | None:intergenic |
| TTAGTTCAAGAACAAGGTAT+TGG | 0.380621 | tig0024731:-34516 | Msa1419860:CDS |
| AAGCATTACCGGAGCTAGAC+AGG | 0.385122 | tig0024731:+33307 | None:intergenic |
| GGAAGACAAAGAAGATGGTT+TGG | 0.385569 | tig0024731:-32127 | Msa1419860:CDS |
| TATTGGTGAAAGACAATAAT+GGG | 0.385914 | tig0024731:-33031 | Msa1419860:CDS |
| AATATACAGTTTGAATCAAA+AGG | 0.389107 | tig0024731:-34918 | Msa1419860:CDS |
| GTGGTGTCTCCAGAAGCTTC+TGG | 0.392388 | tig0024731:-34789 | Msa1419860:CDS |
| TGTAAGTAAGCTTTCAAGTC+AGG | 0.394700 | tig0024731:-30742 | Msa1419860:three_prime_UTR |
| TTCTCATAAGTTTCCTCCAC+TGG | 0.410241 | tig0024731:+30805 | None:intergenic |
| TATCACTTTAGCTGCTAACT+TGG | 0.414026 | tig0024731:-34478 | Msa1419860:intron |
| ATCAAACCATTGATGACATT+AGG | 0.416297 | tig0024731:-35103 | Msa1419860:CDS |
| GGGGATGGGTCTAGCGGAAG+GGG | 0.418548 | tig0024731:-30922 | Msa1419860:three_prime_UTR |
| CCAATTTGGTCTACAATCTC+AGG | 0.418867 | tig0024731:-35224 | Msa1419860:CDS |
| ATATGAATTTCAAGGGGAAA+AGG | 0.424746 | tig0024731:-34548 | Msa1419860:CDS |
| ATCTTGTGAAGATAAAGCTT+TGG | 0.425183 | tig0024731:+35340 | None:intergenic |
| GAGACCGAGAGGATTTGTTT+TGG | 0.425725 | tig0024731:-34697 | Msa1419860:CDS |
| CCTGCTGTATTTATTAAGGT+TGG | 0.427200 | tig0024731:-31038 | Msa1419860:CDS |
| ACTTATGACGTTCCTGTCTC+AGG | 0.433122 | tig0024731:-33613 | Msa1419860:CDS |
| CCATGATTGGCTCACAACTT+TGG | 0.436022 | tig0024731:-33427 | Msa1419860:CDS |
| AATGAAGCATTCATTGAAGA+AGG | 0.436188 | tig0024731:-30962 | Msa1419860:exon |
| CGATGCTGTACGCCGTGTTT+GGG | 0.438290 | tig0024731:-33647 | Msa1419860:CDS |
| AATACAGCAGGATAACCTAT+TGG | 0.441828 | tig0024731:+31050 | None:intergenic |
| AAAACCAAAAGAGTTCAATA+GGG | 0.442082 | tig0024731:-34634 | Msa1419860:CDS |
| GATAATCCTAATGTCATCAA+TGG | 0.451568 | tig0024731:+35097 | None:intergenic |
| ATATTGGTGAAAGACAATAA+TGG | 0.453880 | tig0024731:-33032 | Msa1419860:CDS |
| CATGTTCATCATTAGGGTAA+TGG | 0.458098 | tig0024731:+31252 | None:intergenic |
| ACAGAGAGATTGTGGAAGAA+TGG | 0.458297 | tig0024731:-32176 | Msa1419860:CDS |
| CAATACCTTGCATAAACAAA+TGG | 0.459933 | tig0024731:+34894 | None:intergenic |
| AAGGATGAATGCCAACCAAC+GGG | 0.460345 | tig0024731:-30943 | Msa1419860:three_prime_UTR |
| GTCTTCCTTCAACTTGTCCA+AGG | 0.464772 | tig0024731:+32143 | None:intergenic |
| AAGTTAGCAGCTAAAGTGAT+AGG | 0.464841 | tig0024731:+34480 | None:intergenic |
| CCGAACAAGGAAGTGAATCA+TGG | 0.465495 | tig0024731:-31082 | Msa1419860:CDS |
| TCTCAGCAGGATTCAAACCT+TGG | 0.465528 | tig0024731:+30875 | None:intergenic |
| CCAAATACTGCCTTCGATGT+AGG | 0.466466 | tig0024731:-32993 | Msa1419860:CDS |
| CCAAAGTTGTGAGCCAATCA+TGG | 0.466608 | tig0024731:+33427 | None:intergenic |
| GGAATGGTGGTTGGTGCAGA+AGG | 0.466873 | tig0024731:+35392 | None:intergenic |
| ATAATATCTGGGGCTATAGT+TGG | 0.471731 | tig0024731:-33685 | Msa1419860:CDS |
| AGAATGGAAAAGTAAATCCT+TGG | 0.478857 | tig0024731:-32160 | Msa1419860:CDS |
| ATATGAGTAAGAAGAAGAAA+AGG | 0.479047 | tig0024731:-34965 | Msa1419860:CDS |
| GCCTTTAATCACAGTGACAT+TGG | 0.484809 | tig0024731:-31961 | Msa1419860:CDS |
| AGAAAGAGGTGGCGGCATAC+AGG | 0.485434 | tig0024731:+31275 | None:intergenic |
| GGAATAAAGAGTTCTGTTGT+TGG | 0.486487 | tig0024731:-32012 | Msa1419860:CDS |
| TAAATCCTTGGACAAGTTGA+AGG | 0.490011 | tig0024731:-32148 | Msa1419860:CDS |
| TGGGGCTATAGTTGGAATGC+AGG | 0.493339 | tig0024731:-33677 | Msa1419860:CDS |
| AGAAGCTTCTGGAATTTACA+AGG | 0.494049 | tig0024731:-34778 | Msa1419860:CDS |
| GTTGTTGGTTTACTTAGCAG+TGG | 0.497221 | tig0024731:-31997 | Msa1419860:CDS |
| TATGAATTTCAAGGGGAAAA+GGG | 0.499058 | tig0024731:-34547 | Msa1419860:CDS |
| TGAATATAGAACCGCGTCAA+CGG | 0.500768 | tig0024731:+32860 | None:intergenic |
| TTGAAGGAAGACAAAGAAGA+TGG | 0.501509 | tig0024731:-32132 | Msa1419860:CDS |
| TACTTCATGGGTGCGGAAGA+CGG | 0.501746 | tig0024731:+31849 | None:intergenic |
| TTCCAGAGTGGATAATATCT+GGG | 0.505972 | tig0024731:-33696 | Msa1419860:CDS |
| GGAGGACGAAAGCGGAATGA+TGG | 0.507750 | tig0024731:-34664 | Msa1419860:CDS |
| TGATTGGCTCACAACTTTGG+TGG | 0.508591 | tig0024731:-33424 | Msa1419860:CDS |
| AGTTATCAACAATTCTTGGT+TGG | 0.510221 | tig0024731:-31218 | Msa1419860:CDS |
| TCTCCTACTTTGTTGATCAC+AGG | 0.513355 | tig0024731:-34999 | Msa1419860:CDS |
| CATTAGGGTAATGGAGAAAG+AGG | 0.516353 | tig0024731:+31261 | None:intergenic |
| AGTTGGCTGCATATTTGGAC+AGG | 0.517374 | tig0024731:-31116 | Msa1419860:CDS |
| ATGTCGGCATCTCTCTCAGC+AGG | 0.518796 | tig0024731:+30862 | None:intergenic |
| TCATGGATAGAAGCTCCAAT+AGG | 0.521819 | tig0024731:-31065 | Msa1419860:CDS |
| AATTGATGAATAGAGAGCCT+TGG | 0.522284 | tig0024731:+35363 | None:intergenic |
| CAAGAACAAGGTATTGGAAG+AGG | 0.523278 | tig0024731:-34510 | Msa1419860:CDS |
| GCCTTGGACATTAGGAATGG+TGG | 0.524690 | tig0024731:+35379 | None:intergenic |
| ATGAACAAAGATATTGGGGT+TGG | 0.527562 | tig0024731:-33388 | Msa1419860:CDS |
| GAACATTTCACAGAAACCAT+TGG | 0.527950 | tig0024731:-33733 | Msa1419860:CDS |
| GGTTGGTTCTGAGTTTCTAG+TGG | 0.531402 | tig0024731:-31201 | Msa1419860:CDS |
| GCCCCAGATATTATCCACTC+TGG | 0.534022 | tig0024731:+33694 | None:intergenic |
| GGGCAGAGAGAAACCATGAT+TGG | 0.534957 | tig0024731:-33440 | Msa1419860:CDS |
| ATTATCCACTCTGGAAGCAC+TGG | 0.535414 | tig0024731:+33703 | None:intergenic |
| ATTGAAGGGCGGATATTGCA+TGG | 0.536273 | tig0024731:-33778 | Msa1419860:CDS |
| AAGGAGATCAAATGGTGAGT+TGG | 0.536433 | tig0024731:-32047 | Msa1419860:CDS |
| TAACAGATATCCTGAACTAT+GGG | 0.537517 | tig0024731:-32208 | Msa1419860:CDS |
| TGTAACCAAAATCCTGAGAC+AGG | 0.541890 | tig0024731:+33601 | None:intergenic |
| AAGGGCCATTTGTTTATGCA+AGG | 0.543582 | tig0024731:-34899 | Msa1419860:CDS |
| TTTACAAGGGTTTCAAGAAG+AGG | 0.543736 | tig0024731:-34764 | Msa1419860:CDS |
| CAAATCCTCTCGGTCTCGAT+AGG | 0.543930 | tig0024731:+34703 | None:intergenic |
| ATATACGGAAACTCAATTGA+AGG | 0.544165 | tig0024731:-33793 | Msa1419860:CDS |
| TGTCCGACGGTGCCTCGAGT+AGG | 0.544453 | tig0024731:-30835 | Msa1419860:three_prime_UTR |
| GTGAGTTGGCAAGCAAATGA+TGG | 0.547496 | tig0024731:-32033 | Msa1419860:CDS |
| TTGGTCTACAATCTCAGGAA+AGG | 0.552563 | tig0024731:-35219 | Msa1419860:CDS |
| GTGGTTGGTGCAGAAGGGAA+AGG | 0.553206 | tig0024731:+35398 | None:intergenic |
| TTGCAATCCCTGTCTAGCTC+CGG | 0.554010 | tig0024731:-33315 | Msa1419860:intron |
| CAAAATCAACAGAGAGATTG+TGG | 0.554365 | tig0024731:-32184 | Msa1419860:CDS |
| GTGGTTCCTGTTCTTGACAA+AGG | 0.555848 | tig0024731:-31182 | Msa1419860:CDS |
| GAATGGTGGTTGGTGCAGAA+GGG | 0.558082 | tig0024731:+35393 | None:intergenic |
| CTACTTGAAATGGTGGATGA+TGG | 0.561659 | tig0024731:-32921 | Msa1419860:CDS |
| GTGGATGAACAAAGATATTG+GGG | 0.561688 | tig0024731:-33392 | Msa1419860:CDS |
| AAAAGAGGATAGGTTGGTGT+TGG | 0.562926 | tig0024731:-34728 | Msa1419860:CDS |
| ACAAAGATATTGGGGTTGGA+AGG | 0.564659 | tig0024731:-33384 | Msa1419860:CDS |
| TGGATGATGGAGTCAGAGGA+TGG | 0.569992 | tig0024731:-32908 | Msa1419860:CDS |
| CTTCCTGTGATCAACAAAGT+AGG | 0.574589 | tig0024731:+34996 | None:intergenic |
| ATATACAGTTTGAATCAAAA+GGG | 0.578842 | tig0024731:-34917 | Msa1419860:CDS |
| GAAACTGTGCAGGATTGGGT+AGG | 0.578944 | tig0024731:-33461 | Msa1419860:intron |
| ACAGATTCTACTTGAAATGG+TGG | 0.583683 | tig0024731:-32928 | Msa1419860:CDS |
| AGTAGGATTGCTTCCAGTGG+AGG | 0.585947 | tig0024731:-30818 | Msa1419860:three_prime_UTR |
| ACTTTGGTGGAATTGGGAAG+TGG | 0.586294 | tig0024731:-33411 | Msa1419860:CDS |
| CGAAGGCCTCCCCGTTGACG+CGG | 0.588005 | tig0024731:-32871 | Msa1419860:CDS |
| AAGCACTGGTAGCCTTCCAA+TGG | 0.592511 | tig0024731:+33717 | None:intergenic |
| GAAACCAAAACAAATCCTCT+CGG | 0.592512 | tig0024731:+34693 | None:intergenic |
| CCAAACACGGCGTACAGCAT+CGG | 0.593757 | tig0024731:+33648 | None:intergenic |
| TTTAATCACAGTGACATTGG+AGG | 0.593827 | tig0024731:-31958 | Msa1419860:CDS |
| AAAATGCCCTCCATTGATTG+TGG | 0.594023 | tig0024731:+35277 | None:intergenic |
| CTACTTTGTTGATCACAGGA+AGG | 0.594118 | tig0024731:-34995 | Msa1419860:CDS |
| AAACTGTGCAGGATTGGGTA+GGG | 0.594862 | tig0024731:-33460 | Msa1419860:intron |
| TCTTGGTCCACAATCAATGG+AGG | 0.595057 | tig0024731:-35284 | Msa1419860:CDS |
| ATCGAGCATTCCTACATCGA+AGG | 0.598768 | tig0024731:+32983 | None:intergenic |
| GGTAATGGAGAAAGAGGTGG+CGG | 0.598856 | tig0024731:+31267 | None:intergenic |
| CATTGGGAGAGAGTAGCAGT+TGG | 0.604965 | tig0024731:-31133 | Msa1419860:CDS |
| ATTTCACAGAAACCATTGGA+AGG | 0.607756 | tig0024731:-33729 | Msa1419860:CDS |
| TTCTCAATTCATCCCAAACA+CGG | 0.607794 | tig0024731:+33635 | None:intergenic |
| AAACAGGAAGCAGCACAGAA+AGG | 0.609719 | tig0024731:-31302 | Msa1419860:intron |
| CTTGGTCCACAATCAATGGA+GGG | 0.609794 | tig0024731:-35283 | Msa1419860:CDS |
| GAAGGATGAATGCCAACCAA+CGG | 0.610605 | tig0024731:-30944 | Msa1419860:three_prime_UTR |
| GGGACTAGTCTCTTACAAGA+TGG | 0.613744 | tig0024731:-30902 | Msa1419860:three_prime_UTR |
| TGGACATTAGGAATGGTGGT+TGG | 0.613810 | tig0024731:+35383 | None:intergenic |
| TGATGGAGTCAGAGGATGGA+TGG | 0.615054 | tig0024731:-32904 | Msa1419860:CDS |
| ATGAAAGTGATGAGAATGAG+AGG | 0.615474 | tig0024731:-34599 | Msa1419860:CDS |
| TTGAAGGGCGGATATTGCAT+GGG | 0.616099 | tig0024731:-33777 | Msa1419860:CDS |
| TATACGGAAACTCAATTGAA+GGG | 0.617010 | tig0024731:-33792 | Msa1419860:CDS |
| TTTCTCATATGAATTTCAAG+GGG | 0.617228 | tig0024731:-34554 | Msa1419860:CDS |
| CCAACCTTAATAAATACAGC+AGG | 0.617716 | tig0024731:+31038 | None:intergenic |
| GGGGCTATAGTTGGAATGCA+GGG | 0.619326 | tig0024731:-33676 | Msa1419860:CDS |
| CCTATCTTAGTTCAAGAACA+AGG | 0.626318 | tig0024731:-34522 | Msa1419860:CDS |
| ACAGAGATTGAAGAAAGTAG+AGG | 0.626473 | tig0024731:-35170 | Msa1419860:CDS |
| AGAGCCTTGGACATTAGGAA+TGG | 0.628729 | tig0024731:+35376 | None:intergenic |
| TTTAGAGATAGCCCGAAATG+GGG | 0.628947 | tig0024731:-32084 | Msa1419860:CDS |
| ACCACCATTCCTAATGTCCA+AGG | 0.629938 | tig0024731:-35380 | Msa1419860:CDS |
| TCGAGTAGGATTGCTTCCAG+TGG | 0.634438 | tig0024731:-30821 | Msa1419860:three_prime_UTR |
| GAAGCTTCTGGAATTTACAA+GGG | 0.635022 | tig0024731:-34777 | Msa1419860:CDS |
| AAATGTTCAATTAGGTCACA+AGG | 0.638313 | tig0024731:+33748 | None:intergenic |
| TCTTCAGTGGAGGACGAAAG+CGG | 0.639191 | tig0024731:-34672 | Msa1419860:CDS |
| ATGGTGGATGATGGAGTCAG+AGG | 0.641798 | tig0024731:-32912 | Msa1419860:CDS |
| AATATAGAACCGCGTCAACG+GGG | 0.646560 | tig0024731:+32862 | None:intergenic |
| AGCATTACCGGAGCTAGACA+GGG | 0.650231 | tig0024731:+33308 | None:intergenic |
| TTAGAGATAGCCCGAAATGG+GGG | 0.657608 | tig0024731:-32083 | Msa1419860:CDS |
| GGCTACCAGTGCTTCCAGAG+TGG | 0.659909 | tig0024731:-33708 | Msa1419860:CDS |
| GCTATAGTTGGAATGCAGGG+TGG | 0.662631 | tig0024731:-33673 | Msa1419860:CDS |
| TGCCGACATTTAGTGTCCGA+CGG | 0.665924 | tig0024731:-30848 | Msa1419860:three_prime_UTR |
| CACCGTCGGACACTAAATGT+CGG | 0.668277 | tig0024731:+30846 | None:intergenic |
| TCTTACAAGATGGCAAACCA+AGG | 0.669755 | tig0024731:-30892 | Msa1419860:three_prime_UTR |
| TCCAGAGTGGATAATATCTG+GGG | 0.671625 | tig0024731:-33695 | Msa1419860:CDS |
| TAGGGTAATGGAGAAAGAGG+TGG | 0.673045 | tig0024731:+31264 | None:intergenic |
| GGATGAATGCCAACCAACGG+GGG | 0.674588 | tig0024731:-30941 | Msa1419860:three_prime_UTR |
| ATAGAACCGCGTCAACGGGG+AGG | 0.678721 | tig0024731:+32865 | None:intergenic |
| AATCCTACTCGAGGCACCGT+CGG | 0.680144 | tig0024731:+30832 | None:intergenic |
| CAACTGCTACTCTCTCCCAA+TGG | 0.686540 | tig0024731:+31134 | None:intergenic |
| ACGGAAACTCAATTGAAGGG+CGG | 0.691210 | tig0024731:-33789 | Msa1419860:CDS |
| ACTGGAAGCAATCCTACTCG+AGG | 0.695673 | tig0024731:+30823 | None:intergenic |
| TTCATGGGTGCGGAAGACGG+TGG | 0.720224 | tig0024731:+31852 | None:intergenic |
| AGGATGAATGCCAACCAACG+GGG | 0.722731 | tig0024731:-30942 | Msa1419860:three_prime_UTR |
| TGGTACCTATCGAGACCGAG+AGG | 0.742664 | tig0024731:-34708 | Msa1419860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTCAATTTTTTTTTTAC+CGG | - | tig0024731:31740-31759 | Msa1419860:intron | 10.0% |
| !! | ATTTCATATACTTATATATA+AGG | + | tig0024731:32301-32320 | None:intergenic | 10.0% |
| !!! | TATATTTTTTTTTATCCATT+AGG | + | tig0024731:33625-33644 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGGTTATTCAAAA+AGG | + | tig0024731:35162-35181 | None:intergenic | 15.0% |
| !! | TTGAATAACCTAAAAAATTT+AGG | - | tig0024731:35164-35183 | Msa1419860:CDS | 15.0% |
| !! | TTACAAACTATGTTAAATAT+CGG | + | tig0024731:35400-35419 | None:intergenic | 15.0% |
| !!! | GATGTTTTTTGGTTATTTTA+AGG | + | tig0024731:30722-30741 | None:intergenic | 20.0% |
| !! | ATTAGGATTATCAATGAATT+TGG | - | tig0024731:31071-31090 | Msa1419860:CDS | 20.0% |
| !! | AAGAAAAGGTTTCAAAAATA+TGG | - | tig0024731:31206-31225 | Msa1419860:CDS | 20.0% |
| !! | TTTCAAAAATATGGAATTCA+AGG | - | tig0024731:31215-31234 | Msa1419860:CDS | 20.0% |
| !! | AATATACAGTTTGAATCAAA+AGG | - | tig0024731:31239-31258 | Msa1419860:CDS | 20.0% |
| !! | ATATACAGTTTGAATCAAAA+GGG | - | tig0024731:31240-31259 | Msa1419860:CDS | 20.0% |
| !!! | CAATTTTAGTTCAAGTAATA+AGG | - | tig0024731:31346-31365 | Msa1419860:intron | 20.0% |
| !!! | ATTTTCTCATATGAATTTCA+AGG | - | tig0024731:31601-31620 | Msa1419860:intron | 20.0% |
| !!! | TTTTCTCATATGAATTTCAA+GGG | - | tig0024731:31602-31621 | Msa1419860:intron | 20.0% |
| !! | TTAAAAATCACATATACGAT+TGG | + | tig0024731:32122-32141 | None:intergenic | 20.0% |
| !! | AAGAAATTAGTTCATGATAT+TGG | - | tig0024731:33457-33476 | Msa1419860:intron | 20.0% |
| !! | TGTAAAAATATTTGCATTGA+CGG | - | tig0024731:33831-33850 | Msa1419860:intron | 20.0% |
| !! | CTTCTTCTATATTTAACTAT+AGG | + | tig0024731:34244-34263 | None:intergenic | 20.0% |
| !! | AAATATAAGGATTGACTATT+CGG | - | tig0024731:34478-34497 | Msa1419860:intron | 20.0% |
| !! | ACTATTGATGAATAAATGAA+TGG | - | tig0024731:34542-34561 | Msa1419860:CDS | 20.0% |
| !!! | CAAGATCAAACTTTTTCAAT+TGG | - | tig0024731:30834-30853 | Msa1419860:three_prime_UTR | 25.0% |
| ! | ATATGAGTAAGAAGAAGAAA+AGG | - | tig0024731:31192-31211 | Msa1419860:CDS | 25.0% |
| !! | ATTTGTTTATGCAAGGTATT+GGG | - | tig0024731:31265-31284 | Msa1419860:CDS | 25.0% |
| !!! | TTTTAGTTCAAGTAATAAGG+TGG | - | tig0024731:31349-31368 | Msa1419860:intron | 25.0% |
| ! | AATAGTAGAAAAAAGAGGAT+AGG | - | tig0024731:31419-31438 | Msa1419860:intron | 25.0% |
| ! | AAAACCAAAAGAGTTCAATA+GGG | - | tig0024731:31523-31542 | Msa1419860:intron | 25.0% |
| ! | TTTCTCATATGAATTTCAAG+GGG | - | tig0024731:31603-31622 | Msa1419860:intron | 25.0% |
| !!! | TCAATTTTTTTTTTACCGGT+AGG | - | tig0024731:31744-31763 | Msa1419860:intron | 25.0% |
| !! | ATTTTTGATGTCATGTAGAA+CGG | + | tig0024731:31948-31967 | None:intergenic | 25.0% |
| ! | TGATTGTTTGAAAACGTAAA+AGG | + | tig0024731:32096-32115 | None:intergenic | 25.0% |
| ! | TTTCTGTGAAATGTTCAATT+AGG | + | tig0024731:32420-32439 | None:intergenic | 25.0% |
| !! | AACTTCCGAGAAATAATTTT+CGG | + | tig0024731:32615-32634 | None:intergenic | 25.0% |
| ! | CAGTTTCAATAAGTAAACAA+CGG | + | tig0024731:32683-32702 | None:intergenic | 25.0% |
| ! | ATATTGGTGAAAGACAATAA+TGG | - | tig0024731:33125-33144 | Msa1419860:intron | 25.0% |
| ! | TATTGGTGAAAGACAATAAT+GGG | - | tig0024731:33126-33145 | Msa1419860:intron | 25.0% |
| ! | TTGATTCTCATATCTTTCTT+TGG | - | tig0024731:33324-33343 | Msa1419860:CDS | 25.0% |
| !! | TTCTGTATATTTCTATCAAC+TGG | + | tig0024731:33406-33425 | None:intergenic | 25.0% |
| ! | ATGTGTGCATCATATTAAAT+AGG | - | tig0024731:33505-33524 | Msa1419860:intron | 25.0% |
| ! | TCATATTAAATAGGCAAGTA+AGG | - | tig0024731:33514-33533 | Msa1419860:intron | 25.0% |
| ! | AAGTAAGGTTATTCTTCAAT+AGG | - | tig0024731:33529-33548 | Msa1419860:intron | 25.0% |
| ! | TCTACATCAAATAACTATGT+AGG | + | tig0024731:33593-33612 | None:intergenic | 25.0% |
| ! | AGAACAAAACGATATAACAT+GGG | - | tig0024731:33659-33678 | Msa1419860:CDS | 25.0% |
| ! | GACAGTGTAAAATATCTTTA+CGG | + | tig0024731:33709-33728 | None:intergenic | 25.0% |
| ! | AAGAAAATATGTCATATTGC+AGG | + | tig0024731:34344-34363 | None:intergenic | 25.0% |
| ! | AGAATGAAAACTTTCATTGA+TGG | + | tig0024731:34431-34450 | None:intergenic | 25.0% |
| ! | CATTACTCTCGATAAATATA+AGG | - | tig0024731:34465-34484 | Msa1419860:intron | 25.0% |
| !! | GAAATTTTACAGAATTCAAC+TGG | - | tig0024731:34731-34750 | Msa1419860:CDS | 25.0% |
| ! | GTGTAAAGATGATAGAATTT+AGG | + | tig0024731:34767-34786 | None:intergenic | 25.0% |
| ! | CTCTATATTCTTATGTAAAC+AGG | - | tig0024731:34839-34858 | Msa1419860:CDS | 25.0% |
| ! | TATGAACATGTTCATCATTA+GGG | + | tig0024731:34914-34933 | None:intergenic | 25.0% |
| ! | TTATGAACATGTTCATCATT+AGG | + | tig0024731:34915-34934 | None:intergenic | 25.0% |
| !!! | AGTTAAAGCTTATTTTCCAT+TGG | - | tig0024731:35007-35026 | Msa1419860:CDS | 25.0% |
| !!! | GTTAAAGCTTATTTTCCATT+GGG | - | tig0024731:35008-35027 | Msa1419860:CDS | 25.0% |
| ! | TTATCCTGCTGTATTTATTA+AGG | - | tig0024731:35115-35134 | Msa1419860:CDS | 25.0% |
| !!! | GAAGAATGCCTAAATTTTTT+AGG | + | tig0024731:35175-35194 | None:intergenic | 25.0% |
| ! | TTATGAGAAACCAAAAAAGA+AGG | - | tig0024731:35366-35385 | Msa1419860:CDS | 25.0% |
| !!! | GAAACGTTTGTGATGTTTTT+TGG | + | tig0024731:30733-30752 | None:intergenic | 30.0% |
| ATCTTGTGAAGATAAAGCTT+TGG | + | tig0024731:30820-30839 | None:intergenic | 30.0% | |
| ! | ATCAAACCATTGATGACATT+AGG | - | tig0024731:31054-31073 | Msa1419860:CDS | 30.0% |
| GATAATCCTAATGTCATCAA+TGG | + | tig0024731:31063-31082 | None:intergenic | 30.0% | |
| ! | CAATGAATTTGGTGATCATT+TGG | - | tig0024731:31082-31101 | Msa1419860:CDS | 30.0% |
| GGAATATGAAGTTGAAGATT+TGG | - | tig0024731:31103-31122 | Msa1419860:CDS | 30.0% | |
| CAATACCTTGCATAAACAAA+TGG | + | tig0024731:31266-31285 | None:intergenic | 30.0% | |
| CATTTGTTTATGCAAGGTAT+TGG | - | tig0024731:31264-31283 | Msa1419860:CDS | 30.0% | |
| GGTTGAATAGTAGAAAAAAG+AGG | - | tig0024731:31414-31433 | Msa1419860:intron | 30.0% | |
| !!! | ATTTGTTTTGGTTTCTTCAG+TGG | - | tig0024731:31472-31491 | Msa1419860:intron | 30.0% |
| !!! | CTATTGAACTCTTTTGGTTT+TGG | + | tig0024731:31524-31543 | None:intergenic | 30.0% |
| CAAAACCAAAAGAGTTCAAT+AGG | - | tig0024731:31522-31541 | Msa1419860:intron | 30.0% | |
| !! | AATGAGAGGTTTTATGGTTT+TGG | - | tig0024731:31572-31591 | Msa1419860:intron | 30.0% |
| !! | ATGAGAGGTTTTATGGTTTT+GGG | - | tig0024731:31573-31592 | Msa1419860:intron | 30.0% |
| ATATGAATTTCAAGGGGAAA+AGG | - | tig0024731:31609-31628 | Msa1419860:intron | 30.0% | |
| TATGAATTTCAAGGGGAAAA+GGG | - | tig0024731:31610-31629 | Msa1419860:intron | 30.0% | |
| TTAGTTCAAGAACAAGGTAT+TGG | - | tig0024731:31641-31660 | Msa1419860:intron | 30.0% | |
| GTACTAAATTTGATTCCTAC+CGG | + | tig0024731:31762-31781 | None:intergenic | 30.0% | |
| TCTACATGACATCAAAAATG+AGG | - | tig0024731:31949-31968 | Msa1419860:CDS | 30.0% | |
| !! | AAGTTTTGTAAGATCGAAGA+TGG | + | tig0024731:32003-32022 | None:intergenic | 30.0% |
| ATATACGGAAACTCAATTGA+AGG | - | tig0024731:32364-32383 | Msa1419860:intron | 30.0% | |
| TATACGGAAACTCAATTGAA+GGG | - | tig0024731:32365-32384 | Msa1419860:intron | 30.0% | |
| AAATGTTCAATTAGGTCACA+AGG | + | tig0024731:32412-32431 | None:intergenic | 30.0% | |
| !!! | TTCATTGAGTGTTTTAGTGA+GGG | + | tig0024731:32588-32607 | None:intergenic | 30.0% |
| !!! | TTTCATTGAGTGTTTTAGTG+AGG | + | tig0024731:32589-32608 | None:intergenic | 30.0% |
| CACTAAAACACTCAATGAAA+TGG | - | tig0024731:32589-32608 | Msa1419860:intron | 30.0% | |
| ! | AATGGCCGAAAATTATTTCT+CGG | - | tig0024731:32607-32626 | Msa1419860:intron | 30.0% |
| TTTACTTATTGAAACTGTGC+AGG | - | tig0024731:32686-32705 | Msa1419860:intron | 30.0% | |
| AAGTGGATGAACAAAGATAT+TGG | - | tig0024731:32763-32782 | Msa1419860:intron | 30.0% | |
| AGTGGATGAACAAAGATATT+GGG | - | tig0024731:32764-32783 | Msa1419860:intron | 30.0% | |
| !! | TGATTAAAGAGAAGCATTAC+CGG | + | tig0024731:32864-32883 | None:intergenic | 30.0% |
| TTTCTCGTCAAACAAAATGA+TGG | - | tig0024731:32976-32995 | Msa1419860:CDS | 30.0% | |
| ! | ATTGTTTTCTCTGACACTAT+AGG | - | tig0024731:33046-33065 | Msa1419860:CDS | 30.0% |
| ! | CAAAAAGAGAAACCTTTTTG+AGG | - | tig0024731:33085-33104 | Msa1419860:CDS | 30.0% |
| ! | CAATAATGGGAATGCATATA+TGG | - | tig0024731:33139-33158 | Msa1419860:intron | 30.0% |
| CAAACAGATTCTACTTGAAA+TGG | - | tig0024731:33226-33245 | Msa1419860:intron | 30.0% | |
| GAGAACAAAACGATATAACA+TGG | - | tig0024731:33658-33677 | Msa1419860:CDS | 30.0% | |
| ! | ATTTTCTACTTCACATATCC+AGG | - | tig0024731:33905-33924 | Msa1419860:intron | 30.0% |
| TATCTGTTATGAGCTGAAAT+AGG | + | tig0024731:33938-33957 | None:intergenic | 30.0% | |
| ATAACAGATATCCTGAACTA+TGG | - | tig0024731:33948-33967 | Msa1419860:intron | 30.0% | |
| TAACAGATATCCTGAACTAT+GGG | - | tig0024731:33949-33968 | Msa1419860:intron | 30.0% | |
| AGAATGGAAAAGTAAATCCT+TGG | - | tig0024731:33997-34016 | Msa1419860:intron | 30.0% | |
| !! | GGTATTTTTGCTTACTTCAT+GGG | + | tig0024731:34323-34342 | None:intergenic | 30.0% |
| !! | AGGTATTTTTGCTTACTTCA+TGG | + | tig0024731:34324-34343 | None:intergenic | 30.0% |
| TGATGAGTATATTTGTGCTA+AGG | + | tig0024731:34393-34412 | None:intergenic | 30.0% | |
| ! | TTTGATGGTTTGAGTAAAAC+TGG | + | tig0024731:34668-34687 | None:intergenic | 30.0% |
| CTTGAGTTATCAACAATTCT+TGG | - | tig0024731:34935-34954 | Msa1419860:CDS | 30.0% | |
| AGTTATCAACAATTCTTGGT+TGG | - | tig0024731:34939-34958 | Msa1419860:CDS | 30.0% | |
| ! | ATTAAGGTTGGTTCCATTAT+TGG | - | tig0024731:35131-35150 | Msa1419860:CDS | 30.0% |
| CAAAAAGGTTTCTCCAATAA+TGG | + | tig0024731:35147-35166 | None:intergenic | 30.0% | |
| ! | AATGAAGCATTCATTGAAGA+AGG | - | tig0024731:35195-35214 | Msa1419860:CDS | 30.0% |
| AATTGATGAATAGAGAGCCT+TGG | + | tig0024731:30797-30816 | None:intergenic | 35.0% | |
| ! | GCAATGATTTTCAGCTTTCT+TGG | - | tig0024731:30856-30875 | Msa1419860:three_prime_UTR | 35.0% |
| CTCAGAAAACTAGACCAATT+TGG | - | tig0024731:30919-30938 | Msa1419860:three_prime_UTR | 35.0% | |
| ACAGAGATTGAAGAAAGTAG+AGG | - | tig0024731:30987-31006 | Msa1419860:CDS | 35.0% | |
| CAATCAGAAAAACAAGCATG+AGG | - | tig0024731:31295-31314 | Msa1419860:CDS | 35.0% | |
| TTGTAAATTCCAGAAGCTTC+TGG | + | tig0024731:31380-31399 | None:intergenic | 35.0% | |
| !! | AGAAGCTTCTGGAATTTACA+AGG | - | tig0024731:31379-31398 | Msa1419860:intron | 35.0% |
| !! | GAAGCTTCTGGAATTTACAA+GGG | - | tig0024731:31380-31399 | Msa1419860:intron | 35.0% |
| TTTACAAGGGTTTCAAGAAG+AGG | - | tig0024731:31393-31412 | Msa1419860:intron | 35.0% | |
| GTAGAAAAAAGAGGATAGGT+TGG | - | tig0024731:31423-31442 | Msa1419860:intron | 35.0% | |
| GAAACCAAAACAAATCCTCT+CGG | + | tig0024731:31467-31486 | None:intergenic | 35.0% | |
| ! | CAAACCCTATTGAACTCTTT+TGG | + | tig0024731:31530-31549 | None:intergenic | 35.0% |
| CAAAAGAGTTCAATAGGGTT+TGG | - | tig0024731:31528-31547 | Msa1419860:intron | 35.0% | |
| ATGAAAGTGATGAGAATGAG+AGG | - | tig0024731:31558-31577 | Msa1419860:intron | 35.0% | |
| ! | GATGAGAATGAGAGGTTTTA+TGG | - | tig0024731:31566-31585 | Msa1419860:intron | 35.0% |
| !! | TGAGAGGTTTTATGGTTTTG+GGG | - | tig0024731:31574-31593 | Msa1419860:intron | 35.0% |
| CCTTGTTCTTGAACTAAGAT+AGG | + | tig0024731:31638-31657 | None:intergenic | 35.0% | |
| CCTATCTTAGTTCAAGAACA+AGG | - | tig0024731:31635-31654 | Msa1419860:intron | 35.0% | |
| AAGTTAGCAGCTAAAGTGAT+AGG | + | tig0024731:31680-31699 | None:intergenic | 35.0% | |
| TATCACTTTAGCTGCTAACT+TGG | - | tig0024731:31679-31698 | Msa1419860:intron | 35.0% | |
| GAATCAAATTTAGTACCCTG+AGG | - | tig0024731:31766-31785 | Msa1419860:intron | 35.0% | |
| TACAACACTGACACAAATTG+CGG | - | tig0024731:31791-31810 | Msa1419860:intron | 35.0% | |
| !! | AGCCTTTCATTGGTATTGAT+AGG | - | tig0024731:31886-31905 | Msa1419860:CDS | 35.0% |
| !! | GCCTTTCATTGGTATTGATA+GGG | - | tig0024731:31887-31906 | Msa1419860:CDS | 35.0% |
| AAAAATGAGGTCTCTTTACC+TGG | - | tig0024731:31962-31981 | Msa1419860:CDS | 35.0% | |
| TGGTATAATCATATCCTTCC+AGG | + | tig0024731:31983-32002 | None:intergenic | 35.0% | |
| GAACATTTCACAGAAACCAT+TGG | - | tig0024731:32424-32443 | Msa1419860:intron | 35.0% | |
| ATTTCACAGAAACCATTGGA+AGG | - | tig0024731:32428-32447 | Msa1419860:intron | 35.0% | |
| TTCCAGAGTGGATAATATCT+GGG | - | tig0024731:32461-32480 | Msa1419860:intron | 35.0% | |
| ! | ATAATATCTGGGGCTATAGT+TGG | - | tig0024731:32472-32491 | Msa1419860:intron | 35.0% |
| TTCTCAATTCATCCCAAACA+CGG | + | tig0024731:32525-32544 | None:intergenic | 35.0% | |
| ! | TCGCAAACTTCTGAGAAATA+TGG | + | tig0024731:32656-32675 | None:intergenic | 35.0% |
| TTATTGAAACTGTGCAGGAT+TGG | - | tig0024731:32691-32710 | Msa1419860:intron | 35.0% | |
| TATTGAAACTGTGCAGGATT+GGG | - | tig0024731:32692-32711 | Msa1419860:intron | 35.0% | |
| GTGGATGAACAAAGATATTG+GGG | - | tig0024731:32765-32784 | Msa1419860:intron | 35.0% | |
| ATGAACAAAGATATTGGGGT+TGG | - | tig0024731:32769-32788 | Msa1419860:intron | 35.0% | |
| GTCAAACAAAATGATGGTAC+AGG | - | tig0024731:32982-33001 | Msa1419860:CDS | 35.0% | |
| CAATCGTGATCTTCCTAATA+TGG | + | tig0024731:33010-33029 | None:intergenic | 35.0% | |
| TATTAGGAAGATCACGATTG+CGG | - | tig0024731:33010-33029 | Msa1419860:CDS | 35.0% | |
| !! | AAAGAGAAACCTTTTTGAGG+AGG | - | tig0024731:33088-33107 | Msa1419860:CDS | 35.0% |
| ! | TGAACCAAGTTGCAGTTTTT+GGG | + | tig0024731:33208-33227 | None:intergenic | 35.0% |
| ! | TTGAACCAAGTTGCAGTTTT+TGG | + | tig0024731:33209-33228 | None:intergenic | 35.0% |
| ACAGATTCTACTTGAAATGG+TGG | - | tig0024731:33229-33248 | Msa1419860:intron | 35.0% | |
| !!! | TTAGAAAACCCTTTTGAAGC+AGG | + | tig0024731:33381-33400 | None:intergenic | 35.0% |
| TGTAGAAAACTCACTCCTAA+TGG | - | tig0024731:33607-33626 | Msa1419860:CDS | 35.0% | |
| AACAATCACTAGCTCATACT+TGG | + | tig0024731:33877-33896 | None:intergenic | 35.0% | |
| !!! | CACAATCTCTCTGTTGATTT+TGG | + | tig0024731:33975-33994 | None:intergenic | 35.0% |
| CAAAATCAACAGAGAGATTG+TGG | - | tig0024731:33973-33992 | Msa1419860:intron | 35.0% | |
| ! | TAAATCCTTGGACAAGTTGA+AGG | - | tig0024731:34009-34028 | Msa1419860:intron | 35.0% |
| TTGAAGGAAGACAAAGAAGA+TGG | - | tig0024731:34025-34044 | Msa1419860:intron | 35.0% | |
| !!! | ATGGTTTGGTTTTCTTCATG+AGG | - | tig0024731:34044-34063 | Msa1419860:intron | 35.0% |
| !!! | TGGTTTGGTTTTCTTCATGA+GGG | - | tig0024731:34045-34064 | Msa1419860:intron | 35.0% |
| !! | TTTTAGAGATAGCCCGAAAT+GGG | - | tig0024731:34072-34091 | Msa1419860:intron | 35.0% |
| !! | ATTTTGGGAAGGAGATCAAA+TGG | - | tig0024731:34102-34121 | Msa1419860:intron | 35.0% |
| GGAATAAAGAGTTCTGTTGT+TGG | - | tig0024731:34145-34164 | Msa1419860:intron | 35.0% | |
| TTACTTAGCAGTGGAATTTC+TGG | - | tig0024731:34169-34188 | Msa1419860:intron | 35.0% | |
| TCCAATGTCACTGTGATTAA+AGG | + | tig0024731:34200-34219 | None:intergenic | 35.0% | |
| TTTAATCACAGTGACATTGG+AGG | - | tig0024731:34199-34218 | Msa1419860:intron | 35.0% | |
| !! | CCATGCTGTGTATATTTTTG+CGG | + | tig0024731:34712-34731 | None:intergenic | 35.0% |
| TTACAGAATTCAACTGGTGA+AGG | - | tig0024731:34737-34756 | Msa1419860:CDS | 35.0% | |
| AACTCAGCAGGCTTATAAAA+TGG | - | tig0024731:34812-34831 | Msa1419860:CDS | 35.0% | |
| CATGTTCATCATTAGGGTAA+TGG | + | tig0024731:34908-34927 | None:intergenic | 35.0% | |
| TTCTTTCCTTTGTCAAGAAC+AGG | + | tig0024731:34984-35003 | None:intergenic | 35.0% | |
| !!! | GGAAAAGTATTTTCCGAACA+AGG | - | tig0024731:35062-35081 | Msa1419860:CDS | 35.0% |
| AATACAGCAGGATAACCTAT+TGG | + | tig0024731:35110-35129 | None:intergenic | 35.0% | |
| CCAACCTTAATAAATACAGC+AGG | + | tig0024731:35122-35141 | None:intergenic | 35.0% | |
| CCTGCTGTATTTATTAAGGT+TGG | - | tig0024731:35119-35138 | Msa1419860:CDS | 35.0% | |
| !!! | GGAGATTCAACCTTCTTTTT+TGG | + | tig0024731:35379-35398 | None:intergenic | 35.0% |
| ! | TGTAAGTAAGCTTTCAAGTC+AGG | - | tig0024731:35415-35434 | Msa1419860:CDS | 35.0% |
| AATAGAGAGCCTTGGACATT+AGG | + | tig0024731:30789-30808 | None:intergenic | 40.0% | |
| CTTTCTTGGTCCACAATCAA+TGG | - | tig0024731:30870-30889 | Msa1419860:three_prime_UTR | 40.0% | |
| ! | AAAATGCCCTCCATTGATTG+TGG | + | tig0024731:30883-30902 | None:intergenic | 40.0% |
| CCTGAGATTGTAGACCAAAT+TGG | + | tig0024731:30936-30955 | None:intergenic | 40.0% | |
| CCAATTTGGTCTACAATCTC+AGG | - | tig0024731:30933-30952 | Msa1419860:three_prime_UTR | 40.0% | |
| TTGGTCTACAATCTCAGGAA+AGG | - | tig0024731:30938-30957 | Msa1419860:three_prime_UTR | 40.0% | |
| TCTCCTACTTTGTTGATCAC+AGG | - | tig0024731:31158-31177 | Msa1419860:CDS | 40.0% | |
| CTTCCTGTGATCAACAAAGT+AGG | + | tig0024731:31164-31183 | None:intergenic | 40.0% | |
| CTACTTTGTTGATCACAGGA+AGG | - | tig0024731:31162-31181 | Msa1419860:CDS | 40.0% | |
| AAGGGCCATTTGTTTATGCA+AGG | - | tig0024731:31258-31277 | Msa1419860:CDS | 40.0% | |
| CAGAAAAACAAGCATGAGGT+TGG | - | tig0024731:31299-31318 | Msa1419860:CDS | 40.0% | |
| !! | AAAAGAGGATAGGTTGGTGT+TGG | - | tig0024731:31429-31448 | Msa1419860:intron | 40.0% |
| !!! | TGTTTTGGTTTCTTCAGTGG+AGG | - | tig0024731:31475-31494 | Msa1419860:intron | 40.0% |
| !! | CAAGAACAAGGTATTGGAAG+AGG | - | tig0024731:31647-31666 | Msa1419860:intron | 40.0% |
| TGTCAGTGTTGTAAACCTCA+GGG | + | tig0024731:31784-31803 | None:intergenic | 40.0% | |
| GCACAATGATAGCCTTTCAT+TGG | - | tig0024731:31876-31895 | Msa1419860:CDS | 40.0% | |
| GCCCTATCAATACCAATGAA+AGG | + | tig0024731:31891-31910 | None:intergenic | 40.0% | |
| !! | TTCATTGGTATTGATAGGGC+AGG | - | tig0024731:31891-31910 | Msa1419860:CDS | 40.0% |
| ACTTGACAGAGTACAGATAC+AGG | - | tig0024731:32019-32038 | Msa1419860:CDS | 40.0% | |
| ! | TTTTGATACACCGTCGTTGT+AGG | - | tig0024731:32069-32088 | Msa1419860:CDS | 40.0% |
| ! | GTTTCCAATTTTCTGTACGC+TGG | - | tig0024731:32332-32351 | Msa1419860:intron | 40.0% |
| CTTCCAGAGTGGATAATATC+TGG | - | tig0024731:32460-32479 | Msa1419860:intron | 40.0% | |
| TCCAGAGTGGATAATATCTG+GGG | - | tig0024731:32462-32481 | Msa1419860:intron | 40.0% | |
| TGTAACCAAAATCCTGAGAC+AGG | + | tig0024731:32559-32578 | None:intergenic | 40.0% | |
| !!! | TGTCTCAGGATTTTGGTTAC+AGG | - | tig0024731:32558-32577 | Msa1419860:intron | 40.0% |
| CTCACAACTTTGGTGGAATT+GGG | - | tig0024731:32740-32759 | Msa1419860:intron | 40.0% | |
| ACAAAGATATTGGGGTTGGA+AGG | - | tig0024731:32773-32792 | Msa1419860:intron | 40.0% | |
| ! | ACTGTTTTGCCTCCTCAAAA+AGG | + | tig0024731:33100-33119 | None:intergenic | 40.0% |
| !! | TTTTGAGGAGGCAAAACAGT+TGG | - | tig0024731:33100-33119 | Msa1419860:intron | 40.0% |
| GGCAAAACAGTTGGACATAT+TGG | - | tig0024731:33109-33128 | Msa1419860:intron | 40.0% | |
| !! | CTACTTGAAATGGTGGATGA+TGG | - | tig0024731:33236-33255 | Msa1419860:intron | 40.0% |
| TGAATATAGAACCGCGTCAA+CGG | + | tig0024731:33300-33319 | None:intergenic | 40.0% | |
| !!! | AAAACCCTTTTGAAGCAGGT+AGG | + | tig0024731:33377-33396 | None:intergenic | 40.0% |
| CACACACTCACACATATGAT+TGG | - | tig0024731:33791-33810 | Msa1419860:CDS | 40.0% | |
| !! | TTGATTTTGGCCCATAGTTC+AGG | + | tig0024731:33962-33981 | None:intergenic | 40.0% |
| ACAGAGAGATTGTGGAAGAA+TGG | - | tig0024731:33981-34000 | Msa1419860:intron | 40.0% | |
| GGAAGACAAAGAAGATGGTT+TGG | - | tig0024731:34030-34049 | Msa1419860:intron | 40.0% | |
| !!! | GTTTTAGAGATAGCCCGAAA+TGG | - | tig0024731:34071-34090 | Msa1419860:intron | 40.0% |
| TTTAGAGATAGCCCGAAATG+GGG | - | tig0024731:34073-34092 | Msa1419860:intron | 40.0% | |
| AAAATAGCATCCCCCATTTC+GGG | + | tig0024731:34087-34106 | None:intergenic | 40.0% | |
| CAAAATAGCATCCCCCATTT+CGG | + | tig0024731:34088-34107 | None:intergenic | 40.0% | |
| !!! | GAAATGGGGGATGCTATTTT+GGG | - | tig0024731:34087-34106 | Msa1419860:intron | 40.0% |
| AAGGAGATCAAATGGTGAGT+TGG | - | tig0024731:34110-34129 | Msa1419860:intron | 40.0% | |
| !! | GTTGTTGGTTTACTTAGCAG+TGG | - | tig0024731:34160-34179 | Msa1419860:intron | 40.0% |
| GCCTTTAATCACAGTGACAT+TGG | - | tig0024731:34196-34215 | Msa1419860:intron | 40.0% | |
| !! | GTCAAGAATTGCTTTTGCGT+TGG | - | tig0024731:34263-34282 | Msa1419860:intron | 40.0% |
| !! | AGAATTGCTTTTGCGTTGGA+TGG | - | tig0024731:34267-34286 | Msa1419860:intron | 40.0% |
| ! | TTTTGCTTACTTCATGGGTG+CGG | + | tig0024731:34318-34337 | None:intergenic | 40.0% |
| !! | CAACTCACTTTAGAGTGTAG+AGG | - | tig0024731:34508-34527 | Msa1419860:CDS | 40.0% |
| TAAAACTGGCTGTTGCATGA+TGG | + | tig0024731:34654-34673 | None:intergenic | 40.0% | |
| CAAAGTGTGACAGAGTTTGA+TGG | + | tig0024731:34683-34702 | None:intergenic | 40.0% | |
| CCGCAAAAATATACACAGCA+TGG | - | tig0024731:34709-34728 | Msa1419860:CDS | 40.0% | |
| ! | TGCTGAGTTTGCTTTGTACA+TGG | + | tig0024731:34801-34820 | None:intergenic | 40.0% |
| ATGTACAAAGCAAACTCAGC+AGG | - | tig0024731:34800-34819 | Msa1419860:CDS | 40.0% | |
| !! | CATTAGGGTAATGGAGAAAG+AGG | + | tig0024731:34899-34918 | None:intergenic | 40.0% |
| CCATGATTCACTTCCTTGTT+CGG | + | tig0024731:35078-35097 | None:intergenic | 40.0% | |
| TCATGGATAGAAGCTCCAAT+AGG | - | tig0024731:35092-35111 | Msa1419860:CDS | 40.0% | |
| TCTTACAAGATGGCAAACCA+AGG | - | tig0024731:35265-35284 | Msa1419860:CDS | 40.0% | |
| TTCTCATAAGTTTCCTCCAC+TGG | + | tig0024731:35355-35374 | None:intergenic | 40.0% | |
| TGGACATTAGGAATGGTGGT+TGG | + | tig0024731:30777-30796 | None:intergenic | 45.0% | |
| ACCACCATTCCTAATGTCCA+AGG | - | tig0024731:30777-30796 | Msa1419860:three_prime_UTR | 45.0% | |
| AGAGCCTTGGACATTAGGAA+TGG | + | tig0024731:30784-30803 | None:intergenic | 45.0% | |
| TCTTGGTCCACAATCAATGG+AGG | - | tig0024731:30873-30892 | Msa1419860:three_prime_UTR | 45.0% | |
| CTTGGTCCACAATCAATGGA+GGG | - | tig0024731:30874-30893 | Msa1419860:three_prime_UTR | 45.0% | |
| !! | GAGACCGAGAGGATTTGTTT+TGG | - | tig0024731:31460-31479 | Msa1419860:intron | 45.0% |
| CTGCTAACTTGGTCAGTTAC+AGG | - | tig0024731:31690-31709 | Msa1419860:intron | 45.0% | |
| GTGTCAGTGTTGTAAACCTC+AGG | + | tig0024731:31785-31804 | None:intergenic | 45.0% | |
| !! | ATTGGTATTGATAGGGCAGG+AGG | - | tig0024731:31894-31913 | Msa1419860:CDS | 45.0% |
| GATGTCATGTAGAACGGAGA+AGG | + | tig0024731:31942-31961 | None:intergenic | 45.0% | |
| ATGAGGTCTCTTTACCTGGA+AGG | - | tig0024731:31966-31985 | Msa1419860:CDS | 45.0% | |
| CGTAAAAGGTCCTACAACGA+CGG | + | tig0024731:32082-32101 | None:intergenic | 45.0% | |
| AGCTCCAGCGTACAGAAAAT+TGG | + | tig0024731:32339-32358 | None:intergenic | 45.0% | |
| ACGGAAACTCAATTGAAGGG+CGG | - | tig0024731:32368-32387 | Msa1419860:intron | 45.0% | |
| ATTGAAGGGCGGATATTGCA+TGG | - | tig0024731:32379-32398 | Msa1419860:intron | 45.0% | |
| TTGAAGGGCGGATATTGCAT+GGG | - | tig0024731:32380-32399 | Msa1419860:intron | 45.0% | |
| ! | ATTATCCACTCTGGAAGCAC+TGG | + | tig0024731:32457-32476 | None:intergenic | 45.0% |
| ACTTATGACGTTCCTGTCTC+AGG | - | tig0024731:32544-32563 | Msa1419860:intron | 45.0% | |
| ! | ACGTTCCTGTCTCAGGATTT+TGG | - | tig0024731:32551-32570 | Msa1419860:intron | 45.0% |
| AAACTGTGCAGGATTGGGTA+GGG | - | tig0024731:32697-32716 | Msa1419860:intron | 45.0% | |
| CCAAAGTTGTGAGCCAATCA+TGG | + | tig0024731:32733-32752 | None:intergenic | 45.0% | |
| ! | CCATGATTGGCTCACAACTT+TGG | - | tig0024731:32730-32749 | Msa1419860:intron | 45.0% |
| ! | TGATTGGCTCACAACTTTGG+TGG | - | tig0024731:32733-32752 | Msa1419860:intron | 45.0% |
| GCTCACAACTTTGGTGGAAT+TGG | - | tig0024731:32739-32758 | Msa1419860:intron | 45.0% | |
| ACTTTGGTGGAATTGGGAAG+TGG | - | tig0024731:32746-32765 | Msa1419860:intron | 45.0% | |
| ! | GATGGTACAGGTGCCATATT+AGG | - | tig0024731:32994-33013 | Msa1419860:CDS | 45.0% |
| CCTACATCGAAGGCAGTATT+TGG | + | tig0024731:33167-33186 | None:intergenic | 45.0% | |
| CCAAATACTGCCTTCGATGT+AGG | - | tig0024731:33164-33183 | Msa1419860:intron | 45.0% | |
| ATCGAGCATTCCTACATCGA+AGG | + | tig0024731:33177-33196 | None:intergenic | 45.0% | |
| CTCACCCAAAAACTGCAACT+TGG | - | tig0024731:33201-33220 | Msa1419860:intron | 45.0% | |
| !! | AGAGGATGGATGGCTGATTT+TGG | - | tig0024731:33263-33282 | Msa1419860:intron | 45.0% |
| AATATAGAACCGCGTCAACG+GGG | + | tig0024731:33298-33317 | None:intergenic | 45.0% | |
| GAATATAGAACCGCGTCAAC+GGG | + | tig0024731:33299-33318 | None:intergenic | 45.0% | |
| GTTGACGCGGTTCTATATTC+AGG | - | tig0024731:33299-33318 | Msa1419860:intron | 45.0% | |
| AACCTCCTACCTGCTTCAAA+AGG | - | tig0024731:33369-33388 | Msa1419860:CDS | 45.0% | |
| ACCTCCTACCTGCTTCAAAA+GGG | - | tig0024731:33370-33389 | Msa1419860:CDS | 45.0% | |
| GCTGAAATAGGATCTTCACC+TGG | + | tig0024731:33926-33945 | None:intergenic | 45.0% | |
| GTCTTCCTTCAACTTGTCCA+AGG | + | tig0024731:34017-34036 | None:intergenic | 45.0% | |
| !! | TTGGTTTTCTTCATGAGGGC+TGG | - | tig0024731:34049-34068 | Msa1419860:intron | 45.0% |
| TTAGAGATAGCCCGAAATGG+GGG | - | tig0024731:34074-34093 | Msa1419860:intron | 45.0% | |
| !! | CGAAATGGGGGATGCTATTT+TGG | - | tig0024731:34086-34105 | Msa1419860:intron | 45.0% |
| ! | GTGAGTTGGCAAGCAAATGA+TGG | - | tig0024731:34124-34143 | Msa1419860:intron | 45.0% |
| ! | TGATGCTTTTCCTGCAACCA+GGG | - | tig0024731:34621-34640 | Msa1419860:CDS | 45.0% |
| !! | TGCATGATGGTTTGTTTCCC+TGG | + | tig0024731:34641-34660 | None:intergenic | 45.0% |
| AAACTCTGTCACACTTTGCG+CGG | - | tig0024731:34685-34704 | Msa1419860:CDS | 45.0% | |
| AAACAGGAAGCAGCACAGAA+AGG | - | tig0024731:34855-34874 | Msa1419860:CDS | 45.0% | |
| !! | TAGGGTAATGGAGAAAGAGG+TGG | + | tig0024731:34896-34915 | None:intergenic | 45.0% |
| !! | GGTTGGTTCTGAGTTTCTAG+TGG | - | tig0024731:34956-34975 | Msa1419860:CDS | 45.0% |
| GTGGTTCCTGTTCTTGACAA+AGG | - | tig0024731:34975-34994 | Msa1419860:CDS | 45.0% | |
| GTAGCAGTTGGCTGCATATT+TGG | - | tig0024731:35036-35055 | Msa1419860:CDS | 45.0% | |
| AGTTGGCTGCATATTTGGAC+AGG | - | tig0024731:35041-35060 | Msa1419860:CDS | 45.0% | |
| CCGAACAAGGAAGTGAATCA+TGG | - | tig0024731:35075-35094 | Msa1419860:CDS | 45.0% | |
| GAAGGATGAATGCCAACCAA+CGG | - | tig0024731:35213-35232 | Msa1419860:CDS | 45.0% | |
| AAGGATGAATGCCAACCAAC+GGG | - | tig0024731:35214-35233 | Msa1419860:CDS | 45.0% | |
| !! | GGGACTAGTCTCTTACAAGA+TGG | - | tig0024731:35255-35274 | Msa1419860:CDS | 45.0% |
| TCTCAGCAGGATTCAAACCT+TGG | + | tig0024731:35285-35304 | None:intergenic | 45.0% | |
| ! | GAATGGTGGTTGGTGCAGAA+GGG | + | tig0024731:30767-30786 | None:intergenic | 50.0% |
| GCCTTGGACATTAGGAATGG+TGG | + | tig0024731:30781-30800 | None:intergenic | 50.0% | |
| CAAATCCTCTCGGTCTCGAT+AGG | + | tig0024731:31457-31476 | None:intergenic | 50.0% | |
| TCTTCAGTGGAGGACGAAAG+CGG | - | tig0024731:31485-31504 | Msa1419860:intron | 50.0% | |
| TGAAGTCTAGCGCAAGTGCT+TGG | + | tig0024731:31818-31837 | None:intergenic | 50.0% | |
| TTGATAGGGCAGGAGGTGAT+TGG | - | tig0024731:31901-31920 | Msa1419860:CDS | 50.0% | |
| CGCTGGAGCTTGCAGATATA+CGG | - | tig0024731:32349-32368 | Msa1419860:intron | 50.0% | |
| !! | AAGCACTGGTAGCCTTCCAA+TGG | + | tig0024731:32443-32462 | None:intergenic | 50.0% |
| GCCCCAGATATTATCCACTC+TGG | + | tig0024731:32466-32485 | None:intergenic | 50.0% | |
| TGGGGCTATAGTTGGAATGC+AGG | - | tig0024731:32480-32499 | Msa1419860:intron | 50.0% | |
| GGGGCTATAGTTGGAATGCA+GGG | - | tig0024731:32481-32500 | Msa1419860:intron | 50.0% | |
| GCTATAGTTGGAATGCAGGG+TGG | - | tig0024731:32484-32503 | Msa1419860:intron | 50.0% | |
| GAAACTGTGCAGGATTGGGT+AGG | - | tig0024731:32696-32715 | Msa1419860:intron | 50.0% | |
| GGGCAGAGAGAAACCATGAT+TGG | - | tig0024731:32717-32736 | Msa1419860:intron | 50.0% | |
| ! | TTGCAATCCCTGTCTAGCTC+CGG | - | tig0024731:32842-32861 | Msa1419860:intron | 50.0% |
| AGCATTACCGGAGCTAGACA+GGG | + | tig0024731:32852-32871 | None:intergenic | 50.0% | |
| AAGCATTACCGGAGCTAGAC+AGG | + | tig0024731:32853-32872 | None:intergenic | 50.0% | |
| !! | ATGGTGGATGATGGAGTCAG+AGG | - | tig0024731:33245-33264 | Msa1419860:intron | 50.0% |
| !! | TGGATGATGGAGTCAGAGGA+TGG | - | tig0024731:33249-33268 | Msa1419860:intron | 50.0% |
| TGATGGAGTCAGAGGATGGA+TGG | - | tig0024731:33253-33272 | Msa1419860:intron | 50.0% | |
| !! | TGGATGGCTGATTTTGGCGA+AGG | - | tig0024731:33269-33288 | Msa1419860:intron | 50.0% |
| !!! | ACCCTTTTGAAGCAGGTAGG+AGG | + | tig0024731:33374-33393 | None:intergenic | 50.0% |
| !!! | TGGGGGATGCTATTTTGGGA+AGG | - | tig0024731:34091-34110 | Msa1419860:intron | 50.0% |
| TACTTCATGGGTGCGGAAGA+CGG | + | tig0024731:34311-34330 | None:intergenic | 50.0% | |
| ! | CTGATGCTTTTCCTGCAACC+AGG | - | tig0024731:34620-34639 | Msa1419860:CDS | 50.0% |
| !! | TGGTTTGTTTCCCTGGTTGC+AGG | + | tig0024731:34634-34653 | None:intergenic | 50.0% |
| !! | GGTAATGGAGAAAGAGGTGG+CGG | + | tig0024731:34893-34912 | None:intergenic | 50.0% |
| CAACTGCTACTCTCTCCCAA+TGG | + | tig0024731:35026-35045 | None:intergenic | 50.0% | |
| CATTGGGAGAGAGTAGCAGT+TGG | - | tig0024731:35024-35043 | Msa1419860:CDS | 50.0% | |
| AGGATGAATGCCAACCAACG+GGG | - | tig0024731:35215-35234 | Msa1419860:CDS | 50.0% | |
| TGCCGACATTTAGTGTCCGA+CGG | - | tig0024731:35309-35328 | Msa1419860:CDS | 50.0% | |
| CACCGTCGGACACTAAATGT+CGG | + | tig0024731:35314-35333 | None:intergenic | 50.0% | |
| ACTGGAAGCAATCCTACTCG+AGG | + | tig0024731:35337-35356 | None:intergenic | 50.0% | |
| TCGAGTAGGATTGCTTCCAG+TGG | - | tig0024731:35336-35355 | Msa1419860:CDS | 50.0% | |
| AGTAGGATTGCTTCCAGTGG+AGG | - | tig0024731:35339-35358 | Msa1419860:CDS | 50.0% | |
| ! | GTGGTTGGTGCAGAAGGGAA+AGG | + | tig0024731:30762-30781 | None:intergenic | 55.0% |
| ! | GGAATGGTGGTTGGTGCAGA+AGG | + | tig0024731:30768-30787 | None:intergenic | 55.0% |
| GTGGTGTCTCCAGAAGCTTC+TGG | - | tig0024731:31368-31387 | Msa1419860:intron | 55.0% | |
| TGGTACCTATCGAGACCGAG+AGG | - | tig0024731:31449-31468 | Msa1419860:intron | 55.0% | |
| GGAGGACGAAAGCGGAATGA+TGG | - | tig0024731:31493-31512 | Msa1419860:intron | 55.0% | |
| CCAAACACGGCGTACAGCAT+CGG | + | tig0024731:32512-32531 | None:intergenic | 55.0% | |
| CGATGCTGTACGCCGTGTTT+GGG | - | tig0024731:32510-32529 | Msa1419860:intron | 55.0% | |
| ! | AGAAAGAGGTGGCGGCATAC+AGG | + | tig0024731:34885-34904 | None:intergenic | 55.0% |
| GGATGAATGCCAACCAACGG+GGG | - | tig0024731:35216-35235 | Msa1419860:CDS | 55.0% | |
| AATGCCAACCAACGGGGGAT+GGG | - | tig0024731:35221-35240 | Msa1419860:CDS | 55.0% | |
| ATGTCGGCATCTCTCTCAGC+AGG | + | tig0024731:35298-35317 | None:intergenic | 55.0% | |
| !! | AATCCTACTCGAGGCACCGT+CGG | + | tig0024731:35328-35347 | None:intergenic | 55.0% |
| GGCTACCAGTGCTTCCAGAG+TGG | - | tig0024731:32449-32468 | Msa1419860:intron | 60.0% | |
| CCGATGCTGTACGCCGTGTT+TGG | - | tig0024731:32509-32528 | Msa1419860:intron | 60.0% | |
| ATAGAACCGCGTCAACGGGG+AGG | + | tig0024731:33295-33314 | None:intergenic | 60.0% | |
| TTCATGGGTGCGGAAGACGG+TGG | + | tig0024731:34308-34327 | None:intergenic | 60.0% | |
| GAATGCCAACCAACGGGGGA+TGG | - | tig0024731:35220-35239 | Msa1419860:CDS | 60.0% | |
| TAGACCCATCCCCCGTTGGT+TGG | + | tig0024731:35228-35247 | None:intergenic | 60.0% | |
| CCAACGGGGGATGGGTCTAG+CGG | - | tig0024731:35229-35248 | Msa1419860:CDS | 65.0% | |
| GGGGGATGGGTCTAGCGGAA+GGG | - | tig0024731:35234-35253 | Msa1419860:CDS | 65.0% | |
| GGGGATGGGTCTAGCGGAAG+GGG | - | tig0024731:35235-35254 | Msa1419860:CDS | 65.0% | |
| TGTCCGACGGTGCCTCGAGT+AGG | - | tig0024731:35322-35341 | Msa1419860:CDS | 65.0% | |
| CGAAGGCCTCCCCGTTGACG+CGG | - | tig0024731:33286-33305 | Msa1419860:intron | 70.0% | |
| CCGCTAGACCCATCCCCCGT+TGG | + | tig0024731:35232-35251 | None:intergenic | 70.0% | |
| CGGGGGATGGGTCTAGCGGA+AGG | - | tig0024731:35233-35252 | Msa1419860:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024731 | gene | 30711 | 35468 | 30711 | ID=Msa1419860;Name=Msa1419860 |
| tig0024731 | mRNA | 30711 | 35468 | 30711 | ID=Msa1419860-mRNA-1;Parent=Msa1419860;Name=Msa1419860-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.6|0.5|1|1|1|6|269|784 |
| tig0024731 | exon | 30711 | 31318 | 30711 | ID=Msa1419860-mRNA-1:exon:1134;Parent=Msa1419860-mRNA-1 |
| tig0024731 | exon | 31852 | 32252 | 31852 | ID=Msa1419860-mRNA-1:exon:1133;Parent=Msa1419860-mRNA-1 |
| tig0024731 | exon | 32859 | 33111 | 32859 | ID=Msa1419860-mRNA-1:exon:1132;Parent=Msa1419860-mRNA-1 |
| tig0024731 | exon | 33316 | 33471 | 33316 | ID=Msa1419860-mRNA-1:exon:1131;Parent=Msa1419860-mRNA-1 |
| tig0024731 | exon | 33600 | 33815 | 33600 | ID=Msa1419860-mRNA-1:exon:1130;Parent=Msa1419860-mRNA-1 |
| tig0024731 | exon | 34479 | 35468 | 34479 | ID=Msa1419860-mRNA-1:exon:1129;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 34479 | 35468 | 34479 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 33600 | 33815 | 33600 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 33316 | 33471 | 33316 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 32859 | 33111 | 32859 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 31852 | 32252 | 31852 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | CDS | 30980 | 31318 | 30980 | ID=Msa1419860-mRNA-1:cds;Parent=Msa1419860-mRNA-1 |
| tig0024731 | three_prime_UTR | 30711 | 30979 | 30711 | ID=Msa1419860-mRNA-1:three_prime_utr;Parent=Msa1419860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
