Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388710 | XP_003624991.1 | 95.029 | 865 | 29 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388710 | sp|P32138|SQASE_ECOLI | 36.655 | 592 | 333 | 9 | 277 | 867 | 115 | 665 | 1.91e-125 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388710 | G7KQR9 | 95.029 | 865 | 29 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0388710 | -0.804192 | 2.431134e-49 | -8.615850e-47 |
| Msa0370310 | Msa0388710 | 0.812071 | 5.097107e-51 | -8.615850e-47 |
| Msa0388710 | Msa0416320 | 0.820526 | 6.548380e-53 | -8.615850e-47 |
| Msa0388710 | Msa0426810 | 0.804370 | 2.231992e-49 | -8.615850e-47 |
| Msa0388710 | Msa0462540 | 0.802597 | 5.201362e-49 | -8.615850e-47 |
| Msa0388710 | Msa0982590 | 0.822122 | 2.805199e-53 | -8.615850e-47 |
| Msa0388710 | Msa1122170 | 0.855407 | 6.439694e-62 | -8.615850e-47 |
| Msa0388710 | Msa1160580 | 0.970351 | 1.744539e-131 | -8.615850e-47 |
| Msa0388710 | Msa1182640 | 0.832334 | 1.003310e-55 | -8.615850e-47 |
| Msa0388710 | Msa1207460 | -0.800013 | 1.758750e-48 | -8.615850e-47 |
| Msa0388710 | Msa1236070 | -0.814404 | 1.567362e-51 | -8.615850e-47 |
| Msa0388710 | Msa1310660 | 0.826950 | 2.047976e-54 | -8.615850e-47 |
| Msa0388710 | Msa1350690 | 0.808187 | 3.502958e-50 | -8.615850e-47 |
| Msa0388710 | Msa1383480 | 0.820502 | 6.631735e-53 | -8.615850e-47 |
| Msa0388710 | Msa1419860 | 0.875555 | 2.809434e-68 | -8.615850e-47 |
| Msa0266210 | Msa0388710 | 0.809414 | 1.914567e-50 | -8.615850e-47 |
| Msa0287670 | Msa0388710 | 0.808097 | 3.661172e-50 | -8.615850e-47 |
| Msa0302650 | Msa0388710 | 0.809511 | 1.824965e-50 | -8.615850e-47 |
| Msa0362060 | Msa0388710 | 0.824150 | 9.432405e-54 | -8.615850e-47 |
| Msa0363170 | Msa0388710 | 0.805723 | 1.163012e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388710 | MtrunA17_Chr7g0256191 | 95.029 | 865 | 29 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1706 |
| Msa0388710 | MtrunA17_Chr3g0130691 | 24.485 | 388 | 243 | 12 | 478 | 844 | 387 | 745 | 2.22e-18 | 90.5 |
| Msa0388710 | MtrunA17_Chr2g0293111 | 28.309 | 272 | 155 | 12 | 592 | 856 | 506 | 744 | 1.30e-16 | 85.1 |
| Msa0388710 | MtrunA17_Chr2g0293101 | 27.574 | 272 | 157 | 12 | 592 | 856 | 506 | 744 | 1.63e-14 | 78.2 |
| Msa0388710 | MtrunA17_Chr5g0409111 | 22.628 | 411 | 247 | 14 | 485 | 873 | 314 | 675 | 3.33e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388710 | AT1G68560.1 | 30.603 | 232 | 125 | 9 | 661 | 883 | 560 | 764 | 1.42e-18 | 91.7 |
| Msa0388710 | AT5G63840.2 | 24.292 | 424 | 258 | 18 | 478 | 874 | 423 | 810 | 3.58e-18 | 90.5 |
| Msa0388710 | AT5G63840.1 | 24.292 | 424 | 258 | 18 | 478 | 874 | 396 | 783 | 4.31e-18 | 90.1 |
Find 201 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATCTCTCTGTTGATTT+TGG | 0.067059 | 3_1:-93170686 | None:intergenic |
| TTACTTAGCAGTGGAATTTC+TGG | 0.181038 | 3_1:+93170883 | Msa0388710:CDS |
| CCTACATCGAAGGCAGTATT+TGG | 0.182366 | 3_1:-93169880 | None:intergenic |
| ATTAGGATTATCAATGAATT+TGG | 0.182685 | 3_1:+93167761 | Msa0388710:CDS |
| GTAGCAGTTGGCTGCATATT+TGG | 0.192060 | 3_1:+93171750 | Msa0388710:CDS |
| TCCAATGTCACTGTGATTAA+AGG | 0.201406 | 3_1:-93170911 | None:intergenic |
| CTTGAGTTATCAACAATTCT+TGG | 0.231983 | 3_1:+93171649 | Msa0388710:CDS |
| AGAGGATGGATGGCTGATTT+TGG | 0.243979 | 3_1:+93169979 | Msa0388710:CDS |
| TTATCCTGCTGTATTTATTA+AGG | 0.245649 | 3_1:+93171829 | Msa0388710:CDS |
| CAAACCCTATTGAACTCTTT+TGG | 0.248131 | 3_1:-93168217 | None:intergenic |
| GCTCACAACTTTGGTGGAAT+TGG | 0.248740 | 3_1:+93169455 | Msa0388710:CDS |
| ACGTTCCTGTCTCAGGATTT+TGG | 0.253778 | 3_1:+93169267 | Msa0388710:CDS |
| CTGCTAACTTGGTTAGTTAC+AGG | 0.271881 | 3_1:+93168380 | Msa0388710:CDS |
| CAATGAATTTGGTGATCATT+TGG | 0.279266 | 3_1:+93167772 | Msa0388710:CDS |
| CTTCCAGAGTGGATAATATC+TGG | 0.284214 | 3_1:+93169176 | Msa0388710:CDS |
| CAATAATGGGAATGCATATA+TGG | 0.288175 | 3_1:+93169855 | Msa0388710:CDS |
| TTATGAACATGTTCATCATT+AGG | 0.289122 | 3_1:-93171626 | None:intergenic |
| GGAATATGAAGTTGAAGATT+TGG | 0.289491 | 3_1:+93167793 | Msa0388710:CDS |
| TTGTAAATTCCAGAAGCTTC+TGG | 0.290819 | 3_1:-93168067 | None:intergenic |
| CCGATGCTGTACGCCGTGTT+TGG | 0.296022 | 3_1:+93169225 | Msa0388710:CDS |
| GAATATAGAACCGCGTCAAC+GGG | 0.305740 | 3_1:-93170012 | None:intergenic |
| ATCAAACCATTGATGATATT+AGG | 0.306569 | 3_1:+93167744 | Msa0388710:CDS |
| CTCAGAAAACTAGACCAATT+TGG | 0.308722 | 3_1:+93167609 | Msa0388710:CDS |
| GTTGACGCGGTTCTATATTC+AGG | 0.313245 | 3_1:+93170015 | Msa0388710:CDS |
| CTTCTTCTATATTTAACTAT+AGG | 0.313844 | 3_1:-93170955 | None:intergenic |
| CAAAACCAAAAGAGTTCAAT+AGG | 0.317943 | 3_1:+93168212 | Msa0388710:CDS |
| TATGAACATGTTCATCATTA+GGG | 0.321975 | 3_1:-93171625 | None:intergenic |
| ATTTGTTTATGCAAGGTATT+GGG | 0.331560 | 3_1:+93167955 | Msa0388710:CDS |
| CATTTGTTTATGCAAGGTAT+TGG | 0.334799 | 3_1:+93167954 | Msa0388710:CDS |
| TTTCTGTGAAATGTTCAATT+AGG | 0.337554 | 3_1:-93169133 | None:intergenic |
| AATAGAGAGCCTTGGACATT+AGG | 0.338490 | 3_1:-93167476 | None:intergenic |
| CCATGATTCACTTCCTTGTT+CGG | 0.340613 | 3_1:-93171789 | None:intergenic |
| ATAACAGATATCCTGAACTA+TGG | 0.342076 | 3_1:+93170662 | Msa0388710:CDS |
| TTCTTTCCTTTGTCAAGAAC+AGG | 0.344396 | 3_1:-93171695 | None:intergenic |
| CTCACAACTTTGGTGGAATT+GGG | 0.356672 | 3_1:+93169456 | Msa0388710:CDS |
| CCTTGTTCTTGAACTAAGAT+AGG | 0.364449 | 3_1:-93168325 | None:intergenic |
| AGTGGATGAACAAAGATATT+GGG | 0.364811 | 3_1:+93169480 | Msa0388710:CDS |
| CAAAAGAGTTCAATAGGGTT+TGG | 0.366276 | 3_1:+93168218 | Msa0388710:CDS |
| GGCAAAACAGTTGGACATAT+TGG | 0.371658 | 3_1:+93169825 | Msa0388710:CDS |
| AAGTGGATGAACAAAGATAT+TGG | 0.375947 | 3_1:+93169479 | Msa0388710:CDS |
| CAAACAGATTCTACTTGAAA+TGG | 0.378043 | 3_1:+93169942 | Msa0388710:CDS |
| CTTTCTTGGTCCACAATCAA+TGG | 0.379909 | 3_1:+93167560 | Msa0388710:CDS |
| TTAGTTCAAGAACAAGGTAT+TGG | 0.380621 | 3_1:+93168331 | Msa0388710:CDS |
| CACTGGAGCTTGCAGATATA+CGG | 0.381170 | 3_1:+93169065 | Msa0388710:intron |
| AAGCATTACCGGAGCTAGAC+AGG | 0.385122 | 3_1:-93169566 | None:intergenic |
| GGAAGACAAAGAAGATGGTT+TGG | 0.385569 | 3_1:+93170744 | Msa0388710:CDS |
| TATTGGTGAAAGACAATAAT+GGG | 0.385914 | 3_1:+93169842 | Msa0388710:CDS |
| CAAAGTGTGACAGAGTTTGA+TGG | 0.389027 | 3_1:-93171394 | None:intergenic |
| AATATACAGTTTGAATCAAA+AGG | 0.389107 | 3_1:+93167929 | Msa0388710:CDS |
| TTTGATGGTTTGAGTAAAAC+TGG | 0.389311 | 3_1:-93171379 | None:intergenic |
| GTGGTGTCTCCAGAAGCTTC+TGG | 0.392388 | 3_1:+93168058 | Msa0388710:CDS |
| TGGTATAATCATATCCTTCC+AGG | 0.400938 | 3_1:-93168668 | None:intergenic |
| TATCACTTTAGCTGCTAACT+TGG | 0.404655 | 3_1:+93168369 | Msa0388710:CDS |
| GGGGATGGGTCTAGCGGAAG+GGG | 0.418548 | 3_1:+93171949 | Msa0388710:CDS |
| ATATGAATTTCAAGGGGAAA+AGG | 0.424746 | 3_1:+93168299 | Msa0388710:CDS |
| ATCTTGTGAAGATAAAGCTT+TGG | 0.425183 | 3_1:-93167507 | None:intergenic |
| TATTGAAACTGTGCAGGATT+GGG | 0.428371 | 3_1:+93169408 | Msa0388710:CDS |
| CCTGAGATTGTAGACCAAAT+TGG | 0.431074 | 3_1:-93167623 | None:intergenic |
| ACTTATGACGTTCCTGTCTC+AGG | 0.433122 | 3_1:+93169260 | Msa0388710:CDS |
| CCATGATTGGCTCACAACTT+TGG | 0.436022 | 3_1:+93169446 | Msa0388710:CDS |
| CGATGCTGTACGCCGTGTTT+GGG | 0.438290 | 3_1:+93169226 | Msa0388710:CDS |
| AATACAGCAGGATAACCTAT+TGG | 0.441828 | 3_1:-93171821 | None:intergenic |
| AAAACCAAAAGAGTTCAATA+GGG | 0.442082 | 3_1:+93168213 | Msa0388710:CDS |
| TTGACAGGGCAGGAGGTGAT+TGG | 0.450945 | 3_1:+93168589 | Msa0388710:intron |
| ATATTGGTGAAAGACAATAA+TGG | 0.453880 | 3_1:+93169841 | Msa0388710:CDS |
| TTATTGAAACTGTGCAGGAT+TGG | 0.453994 | 3_1:+93169407 | Msa0388710:CDS |
| GATAATCCTAATATCATCAA+TGG | 0.454007 | 3_1:-93167750 | None:intergenic |
| CCAATTTGGTCTACAATCTC+AGG | 0.455407 | 3_1:+93167623 | Msa0388710:CDS |
| CATGTTCATCATTAGGGTAA+TGG | 0.458098 | 3_1:-93171619 | None:intergenic |
| ACAGAGAGATTGTGGAAGAA+TGG | 0.458297 | 3_1:+93170695 | Msa0388710:CDS |
| CAATACCTTGCATAAACAAA+TGG | 0.459933 | 3_1:-93167953 | None:intergenic |
| AAGGATGAATGCCAACCAAC+GGG | 0.460345 | 3_1:+93171928 | Msa0388710:CDS |
| GTCTTCCTTCAACTTGTCCA+AGG | 0.464772 | 3_1:-93170728 | None:intergenic |
| CCGAACAAGGAAGTGAATCA+TGG | 0.465495 | 3_1:+93171789 | Msa0388710:CDS |
| TCTCAGCAGGATTCAAACCT+TGG | 0.465528 | 3_1:-93171996 | None:intergenic |
| CCAAATACTGCCTTCGATGT+AGG | 0.466466 | 3_1:+93169880 | Msa0388710:CDS |
| CCAAAGTTGTGAGCCAATCA+TGG | 0.466608 | 3_1:-93169446 | None:intergenic |
| GGAATGGTGGTTGGTGCAGA+AGG | 0.466873 | 3_1:-93167455 | None:intergenic |
| ATAATATCTGGGGCTATAGT+TGG | 0.471731 | 3_1:+93169188 | Msa0388710:CDS |
| AAGTTAGCAGCTAAAGTGAT+AGG | 0.474949 | 3_1:-93168367 | None:intergenic |
| TTTACTTATTGAAACTGTGC+AGG | 0.476007 | 3_1:+93169402 | Msa0388710:CDS |
| AGAATGGAAAAGTAAATCCT+TGG | 0.478857 | 3_1:+93170711 | Msa0388710:CDS |
| ATATGAGTAAGAAGAAGAAA+AGG | 0.479047 | 3_1:+93167882 | Msa0388710:CDS |
| GCCTTTAATCACAGTGACAT+TGG | 0.484809 | 3_1:+93170910 | Msa0388710:CDS |
| AGAAAGAGGTGGCGGCATAC+AGG | 0.485434 | 3_1:-93171596 | None:intergenic |
| GGAATAAAGAGTTCTGTTGT+TGG | 0.486487 | 3_1:+93170859 | Msa0388710:CDS |
| TAAATCCTTGGACAAGTTGA+AGG | 0.490011 | 3_1:+93170723 | Msa0388710:CDS |
| CCTCCTACTTTGTTGATCAC+AGG | 0.493159 | 3_1:+93167848 | Msa0388710:CDS |
| TGGGGCTATAGTTGGAATGC+AGG | 0.493339 | 3_1:+93169196 | Msa0388710:CDS |
| AGAAGCTTCTGGAATTTACA+AGG | 0.494049 | 3_1:+93168069 | Msa0388710:CDS |
| GTTGTTGGTTTACTTAGCAG+TGG | 0.497221 | 3_1:+93170874 | Msa0388710:CDS |
| TATGAATTTCAAGGGGAAAA+GGG | 0.499058 | 3_1:+93168300 | Msa0388710:CDS |
| TGAATATAGAACCGCGTCAA+CGG | 0.500768 | 3_1:-93170013 | None:intergenic |
| TTGAAGGAAGACAAAGAAGA+TGG | 0.501509 | 3_1:+93170739 | Msa0388710:CDS |
| TACTTCATGGGTGCGGAAGA+CGG | 0.501746 | 3_1:-93171022 | None:intergenic |
| TTCCAGAGTGGATAATATCT+GGG | 0.505972 | 3_1:+93169177 | Msa0388710:CDS |
| GTTTGTATTGGTTTCTTCAG+TGG | 0.506922 | 3_1:+93168162 | Msa0388710:CDS |
| TGATTGGCTCACAACTTTGG+TGG | 0.508591 | 3_1:+93169449 | Msa0388710:CDS |
| AGTTATCAACAATTCTTGGT+TGG | 0.510221 | 3_1:+93171653 | Msa0388710:CDS |
| TGTATTGGTTTCTTCAGTGG+AGG | 0.513858 | 3_1:+93168165 | Msa0388710:CDS |
| CATTAGGGTAATGGAGAAAG+AGG | 0.516353 | 3_1:-93171610 | None:intergenic |
| AGTTGGCTGCATATTTGGAC+AGG | 0.517374 | 3_1:+93171755 | Msa0388710:CDS |
| ATGTCGGCATCTCTCTCAGC+AGG | 0.518796 | 3_1:-93172009 | None:intergenic |
| TCATGGATAGAAGCTCCAAT+AGG | 0.521819 | 3_1:+93171806 | Msa0388710:CDS |
| AATTGATGAATAGAGAGCCT+TGG | 0.522284 | 3_1:-93167484 | None:intergenic |
| CAAGAACAAGGTATTGGAAG+AGG | 0.523278 | 3_1:+93168337 | Msa0388710:CDS |
| GCCTTGGACATTAGGAATGG+TGG | 0.524690 | 3_1:-93167468 | None:intergenic |
| ATGAACAAAGATATTGGGGT+TGG | 0.527562 | 3_1:+93169485 | Msa0388710:CDS |
| GAACATTTCACAGAAACCAT+TGG | 0.527950 | 3_1:+93169140 | Msa0388710:CDS |
| TTACAGAATTCAACTGGTGA+AGG | 0.528592 | 3_1:+93171451 | Msa0388710:CDS |
| ACTTGACAGAGTACAGATAC+AGG | 0.529662 | 3_1:+93168707 | Msa0388710:CDS |
| GGTTGGTTCTGAGTTTCTAG+TGG | 0.531402 | 3_1:+93171670 | Msa0388710:CDS |
| GCCCCAGATATTATCCACTC+TGG | 0.534022 | 3_1:-93169179 | None:intergenic |
| GGGCAGAGAGAAACCATGAT+TGG | 0.534957 | 3_1:+93169433 | Msa0388710:CDS |
| ATTATCCACTCTGGAAGCAC+TGG | 0.535414 | 3_1:-93169170 | None:intergenic |
| ATTGAAGGGCGGATATTGCA+TGG | 0.536273 | 3_1:+93169095 | Msa0388710:CDS |
| AAGGAGATCAAATGGTGAGT+TGG | 0.536433 | 3_1:+93170824 | Msa0388710:CDS |
| TAACAGATATCCTGAACTAT+GGG | 0.537517 | 3_1:+93170663 | Msa0388710:CDS |
| TGTAACCAAAATCCTGAGAC+AGG | 0.541890 | 3_1:-93169272 | None:intergenic |
| GAGGCCGAGAGGGTTTGTAT+TGG | 0.542213 | 3_1:+93168150 | Msa0388710:CDS |
| AAGGGCCATTTGTTTATGCA+AGG | 0.543582 | 3_1:+93167948 | Msa0388710:CDS |
| TTTACAAGGGTTTCAAGAAG+AGG | 0.543736 | 3_1:+93168083 | Msa0388710:CDS |
| ATATACGGAAACTCAATTGA+AGG | 0.544165 | 3_1:+93169080 | Msa0388710:CDS |
| GTGAGTTGGCAAGCAAATGA+TGG | 0.547496 | 3_1:+93170838 | Msa0388710:CDS |
| GTGGTTGGTGCAGAAGGGAA+AGG | 0.553206 | 3_1:-93167449 | None:intergenic |
| TTGCAATCCCTGTCTAGCTC+CGG | 0.554010 | 3_1:+93169558 | Msa0388710:CDS |
| CAAAATCAACAGAGAGATTG+TGG | 0.554365 | 3_1:+93170687 | Msa0388710:CDS |
| GTGGTTCCTGTTCTTGACAA+AGG | 0.555848 | 3_1:+93171689 | Msa0388710:CDS |
| GGAGGATGAAAGTGGAGTGA+TGG | 0.556153 | 3_1:+93168183 | Msa0388710:CDS |
| GAATGGTGGTTGGTGCAGAA+GGG | 0.558082 | 3_1:-93167454 | None:intergenic |
| GTGGATGAACAAAGATATTG+GGG | 0.561688 | 3_1:+93169481 | Msa0388710:CDS |
| AAAAGAGGATAGGTTGGTGT+TGG | 0.562926 | 3_1:+93168119 | Msa0388710:CDS |
| ACAAAGATATTGGGGTTGGA+AGG | 0.564659 | 3_1:+93169489 | Msa0388710:CDS |
| ATGAGGTCTCTTTACCTGGA+AGG | 0.566943 | 3_1:+93168654 | Msa0388710:CDS |
| CAAACCCTCTCGGCCTCGAT+AGG | 0.571848 | 3_1:-93168144 | None:intergenic |
| TCTTCAGTGGAGGATGAAAG+TGG | 0.572618 | 3_1:+93168175 | Msa0388710:CDS |
| ATATACAGTTTGAATCAAAA+GGG | 0.578842 | 3_1:+93167930 | Msa0388710:CDS |
| GAAACTGTGCAGGATTGGGT+AGG | 0.578944 | 3_1:+93169412 | Msa0388710:CDS |
| GATGTCATGTAGAATGGGGA+AGG | 0.579176 | 3_1:-93168627 | None:intergenic |
| ACAGATTCTACTTGAAATGG+TGG | 0.583683 | 3_1:+93169945 | Msa0388710:CDS |
| CCTGTGATCAACAAAGTAGG+AGG | 0.584793 | 3_1:-93167848 | None:intergenic |
| TTCTTAATTCATCCCAAACA+CGG | 0.585708 | 3_1:-93169238 | None:intergenic |
| ACTTTGGTGGAATTGGGAAG+TGG | 0.586294 | 3_1:+93169462 | Msa0388710:CDS |
| CTTCCTGTGATCAACAAAGT+AGG | 0.586960 | 3_1:-93167851 | None:intergenic |
| CGAAGGCCTCCCCGTTGACG+CGG | 0.588005 | 3_1:+93170002 | Msa0388710:CDS |
| AAGCACTGGTAGCCTTCCAA+TGG | 0.592511 | 3_1:-93169156 | None:intergenic |
| CTACTTGAAATGGTGGATGA+CGG | 0.593327 | 3_1:+93169952 | Msa0388710:CDS |
| CCAAACACGGCGTACAGCAT+CGG | 0.593757 | 3_1:-93169225 | None:intergenic |
| TTTAATCACAGTGACATTGG+AGG | 0.593827 | 3_1:+93170913 | Msa0388710:CDS |
| AAAATGCCCTCCATTGATTG+TGG | 0.594023 | 3_1:-93167570 | None:intergenic |
| CTACTTTGTTGATCACAGGA+AGG | 0.594118 | 3_1:+93167852 | Msa0388710:CDS |
| AAACTGTGCAGGATTGGGTA+GGG | 0.594862 | 3_1:+93169413 | Msa0388710:CDS |
| TCTTGGTCCACAATCAATGG+AGG | 0.595057 | 3_1:+93167563 | Msa0388710:CDS |
| ATCGAGCATTCCTACATCGA+AGG | 0.598768 | 3_1:-93169890 | None:intergenic |
| GGTAATGGAGAAAGAGGTGG+CGG | 0.598856 | 3_1:-93171604 | None:intergenic |
| ATTGGTATTGACAGGGCAGG+AGG | 0.601923 | 3_1:+93168582 | Msa0388710:intron |
| CATTGGGAGAGAGTAGCAGT+TGG | 0.604965 | 3_1:+93171738 | Msa0388710:CDS |
| ATTTCACAGAAACCATTGGA+AGG | 0.607756 | 3_1:+93169144 | Msa0388710:CDS |
| AAACAGGAAGCAGCACAGAA+AGG | 0.609719 | 3_1:+93171569 | Msa0388710:intron |
| CTTGGTCCACAATCAATGGA+GGG | 0.609794 | 3_1:+93167564 | Msa0388710:CDS |
| GAAGGATGAATGCCAACCAA+CGG | 0.610605 | 3_1:+93171927 | Msa0388710:intron |
| GGGACTAGTCTCTTACAAGA+TGG | 0.613744 | 3_1:+93171969 | Msa0388710:CDS |
| TGGACATTAGGAATGGTGGT+TGG | 0.613810 | 3_1:-93167464 | None:intergenic |
| ATGAAAGTGATGAGAATGAG+AGG | 0.615474 | 3_1:+93168248 | Msa0388710:CDS |
| AAACTCTGTCACACTTTGCG+CGG | 0.615548 | 3_1:+93171399 | Msa0388710:CDS |
| TTGAAGGGCGGATATTGCAT+GGG | 0.616099 | 3_1:+93169096 | Msa0388710:CDS |
| TATACGGAAACTCAATTGAA+GGG | 0.617010 | 3_1:+93169081 | Msa0388710:CDS |
| TTTCTCATATGAATTTCAAG+GGG | 0.617228 | 3_1:+93168293 | Msa0388710:CDS |
| CCAACCTTAATAAATACAGC+AGG | 0.617716 | 3_1:-93171833 | None:intergenic |
| GGGGCTATAGTTGGAATGCA+GGG | 0.619326 | 3_1:+93169197 | Msa0388710:CDS |
| GAAACCAATACAAACCCTCT+CGG | 0.621595 | 3_1:-93168154 | None:intergenic |
| CCTATCTTAGTTCAAGAACA+AGG | 0.626318 | 3_1:+93168325 | Msa0388710:CDS |
| TGACGGAGTCAGAGGATGGA+TGG | 0.626833 | 3_1:+93169969 | Msa0388710:CDS |
| AGAGCCTTGGACATTAGGAA+TGG | 0.628729 | 3_1:-93167471 | None:intergenic |
| TTTAGAGATAGCCCGAAATG+GGG | 0.628947 | 3_1:+93170787 | Msa0388710:CDS |
| AAATGTTCAATTAGGTCACA+AGG | 0.629845 | 3_1:-93169125 | None:intergenic |
| ACCACCATTCCTAATGTCCA+AGG | 0.629938 | 3_1:+93167467 | Msa0388710:CDS |
| ACAGAGATTGAAGAAAGTAG+AGG | 0.633504 | 3_1:+93167677 | Msa0388710:CDS |
| GAAGCTTCTGGAATTTACAA+GGG | 0.635022 | 3_1:+93168070 | Msa0388710:CDS |
| GGTACCTATCGAGGCCGAGA+GGG | 0.637283 | 3_1:+93168140 | Msa0388710:CDS |
| TGGATGACGGAGTCAGAGGA+TGG | 0.638039 | 3_1:+93169965 | Msa0388710:CDS |
| TAAAACTGGCTGTTGCATGA+TGG | 0.638053 | 3_1:-93171365 | None:intergenic |
| AATATAGAACCGCGTCAACG+GGG | 0.646560 | 3_1:-93170011 | None:intergenic |
| AGCATTACCGGAGCTAGACA+GGG | 0.650231 | 3_1:-93169565 | None:intergenic |
| TTAGAGATAGCCCGAAATGG+GGG | 0.657608 | 3_1:+93170788 | Msa0388710:CDS |
| GGCTACCAGTGCTTCCAGAG+TGG | 0.659909 | 3_1:+93169165 | Msa0388710:CDS |
| GCTATAGTTGGAATGCAGGG+TGG | 0.662631 | 3_1:+93169200 | Msa0388710:CDS |
| CACCGTCGGACACTAAATGT+CGG | 0.668277 | 3_1:-93172025 | None:intergenic |
| GTTGGTGTTGGTACCTATCG+AGG | 0.669645 | 3_1:+93168131 | Msa0388710:CDS |
| TCTTACAAGATGGCAAACCA+AGG | 0.669755 | 3_1:+93171979 | Msa0388710:CDS |
| ATGGTGGATGACGGAGTCAG+AGG | 0.669797 | 3_1:+93169961 | Msa0388710:CDS |
| TCCAGAGTGGATAATATCTG+GGG | 0.671625 | 3_1:+93169178 | Msa0388710:CDS |
| TAGGGTAATGGAGAAAGAGG+TGG | 0.673045 | 3_1:-93171607 | None:intergenic |
| GGATGAATGCCAACCAACGG+GGG | 0.674588 | 3_1:+93171930 | Msa0388710:CDS |
| ATAGAACCGCGTCAACGGGG+AGG | 0.678721 | 3_1:-93170008 | None:intergenic |
| TGGTACCTATCGAGGCCGAG+AGG | 0.683213 | 3_1:+93168139 | Msa0388710:CDS |
| CAACTGCTACTCTCTCCCAA+TGG | 0.686540 | 3_1:-93171737 | None:intergenic |
| ACGGAAACTCAATTGAAGGG+CGG | 0.691210 | 3_1:+93169084 | Msa0388710:CDS |
| CAGTTTCAATAAGTAAACAA+CGG | 0.719234 | 3_1:-93169396 | None:intergenic |
| TTCATGGGTGCGGAAGACGG+TGG | 0.720224 | 3_1:-93171019 | None:intergenic |
| AGGATGAATGCCAACCAACG+GGG | 0.722731 | 3_1:+93171929 | Msa0388710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATATACTTATATATA+AGG | - | chr3_1:93169017-93169036 | None:intergenic | 10.0% |
| !!! | TATATTTTTTTTTATCCATT+AGG | - | chr3_1:93170341-93170360 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGGTTATTCAAAA+AGG | - | chr3_1:93171876-93171895 | None:intergenic | 15.0% |
| !! | TTGAATAACCTAAAAAATTT+AGG | + | chr3_1:93171878-93171897 | Msa0388710:intron | 15.0% |
| !!! | GATGTTTTTTGGTTATTTTA+AGG | - | chr3_1:93167412-93167431 | None:intergenic | 20.0% |
| !! | ATTAGGATTATCAATGAATT+TGG | + | chr3_1:93167761-93167780 | Msa0388710:CDS | 20.0% |
| !! | AAGAAAAGGTTTCAAAAATA+TGG | + | chr3_1:93167896-93167915 | Msa0388710:CDS | 20.0% |
| !! | TTTCAAAAATATGGAATTCA+AGG | + | chr3_1:93167905-93167924 | Msa0388710:CDS | 20.0% |
| !! | AATATACAGTTTGAATCAAA+AGG | + | chr3_1:93167929-93167948 | Msa0388710:CDS | 20.0% |
| !! | ATATACAGTTTGAATCAAAA+GGG | + | chr3_1:93167930-93167949 | Msa0388710:CDS | 20.0% |
| !!! | GAATTTTAGTTCAAGTAATA+AGG | + | chr3_1:93168036-93168055 | Msa0388710:CDS | 20.0% |
| !!! | ATTTTCTCATATGAATTTCA+AGG | + | chr3_1:93168291-93168310 | Msa0388710:CDS | 20.0% |
| !!! | TTTTCTCATATGAATTTCAA+GGG | + | chr3_1:93168292-93168311 | Msa0388710:CDS | 20.0% |
| !! | CTGATAAAAAAAACTGAATT+AGG | - | chr3_1:93168431-93168450 | None:intergenic | 20.0% |
| !!! | ATTCAGTTTTTTTTATCAGT+AGG | + | chr3_1:93168432-93168451 | Msa0388710:intron | 20.0% |
| !! | TGATTGTTTGAAAATGTAAA+AGG | - | chr3_1:93168784-93168803 | None:intergenic | 20.0% |
| !! | TTAAAAATCACATATACGAT+TGG | - | chr3_1:93168810-93168829 | None:intergenic | 20.0% |
| !! | TGATGATTATAATTGATTGA+TGG | + | chr3_1:93168866-93168885 | Msa0388710:intron | 20.0% |
| !! | AAGAAATTAGTTCATGATAT+TGG | + | chr3_1:93170173-93170192 | Msa0388710:intron | 20.0% |
| !! | TGTAAAAATATTTGCATTGA+CGG | + | chr3_1:93170545-93170564 | Msa0388710:intron | 20.0% |
| !! | CTTCTTCTATATTTAACTAT+AGG | - | chr3_1:93170958-93170977 | None:intergenic | 20.0% |
| !! | AAATATAAGGATTGACTATT+CGG | + | chr3_1:93171192-93171211 | Msa0388710:intron | 20.0% |
| !! | ACTATTGATGAATAAATGAA+TGG | + | chr3_1:93171256-93171275 | Msa0388710:intron | 20.0% |
| !!! | CAAGATCAAACTTTTTCAAT+TGG | + | chr3_1:93167524-93167543 | Msa0388710:CDS | 25.0% |
| !! | ATCAAACCATTGATGATATT+AGG | + | chr3_1:93167744-93167763 | Msa0388710:CDS | 25.0% |
| ! | GATAATCCTAATATCATCAA+TGG | - | chr3_1:93167753-93167772 | None:intergenic | 25.0% |
| ! | ATATGAGTAAGAAGAAGAAA+AGG | + | chr3_1:93167882-93167901 | Msa0388710:CDS | 25.0% |
| !! | ATTTGTTTATGCAAGGTATT+GGG | + | chr3_1:93167955-93167974 | Msa0388710:CDS | 25.0% |
| !!! | TTTTAGTTCAAGTAATAAGG+TGG | + | chr3_1:93168039-93168058 | Msa0388710:CDS | 25.0% |
| ! | AAAACCAAAAGAGTTCAATA+GGG | + | chr3_1:93168213-93168232 | Msa0388710:CDS | 25.0% |
| ! | TTTCTCATATGAATTTCAAG+GGG | + | chr3_1:93168293-93168312 | Msa0388710:CDS | 25.0% |
| ! | ATATCGTTTATGATTACTAC+CGG | - | chr3_1:93168526-93168545 | None:intergenic | 25.0% |
| !! | TTTTTGATGTCATGTAGAAT+GGG | - | chr3_1:93168635-93168654 | None:intergenic | 25.0% |
| !! | ATTTTTGATGTCATGTAGAA+TGG | - | chr3_1:93168636-93168655 | None:intergenic | 25.0% |
| ! | TTTCTGTGAAATGTTCAATT+AGG | - | chr3_1:93169136-93169155 | None:intergenic | 25.0% |
| !! | AACTTCCGAGAAATAATTTT+CGG | - | chr3_1:93169331-93169350 | None:intergenic | 25.0% |
| ! | CAGTTTCAATAAGTAAACAA+CGG | - | chr3_1:93169399-93169418 | None:intergenic | 25.0% |
| ! | ATATTGGTGAAAGACAATAA+TGG | + | chr3_1:93169841-93169860 | Msa0388710:CDS | 25.0% |
| ! | TATTGGTGAAAGACAATAAT+GGG | + | chr3_1:93169842-93169861 | Msa0388710:CDS | 25.0% |
| ! | TTGATTCTCATATCTTTCTT+TGG | + | chr3_1:93170040-93170059 | Msa0388710:intron | 25.0% |
| !! | TTCTGTATATTTCTATCAAC+TGG | - | chr3_1:93170122-93170141 | None:intergenic | 25.0% |
| ! | ATGTGTGCATCATATTAAAT+AGG | + | chr3_1:93170221-93170240 | Msa0388710:intron | 25.0% |
| ! | TCATATTAAATAGGCAAGTA+AGG | + | chr3_1:93170230-93170249 | Msa0388710:intron | 25.0% |
| ! | AAGTAAGGTTATTCTTCAAT+AGG | + | chr3_1:93170245-93170264 | Msa0388710:intron | 25.0% |
| ! | TCTACATCAAATAACTATGT+AGG | - | chr3_1:93170309-93170328 | None:intergenic | 25.0% |
| ! | AGAACAAAACGATATAACAT+GGG | + | chr3_1:93170375-93170394 | Msa0388710:intron | 25.0% |
| ! | AAGAAAATATGTCATATTGC+AGG | - | chr3_1:93171058-93171077 | None:intergenic | 25.0% |
| ! | AGAATGAAAACTTTCATTGA+TGG | - | chr3_1:93171145-93171164 | None:intergenic | 25.0% |
| ! | CATTACTCTCGATAAATATA+AGG | + | chr3_1:93171179-93171198 | Msa0388710:intron | 25.0% |
| !! | GAAATTTTACAGAATTCAAC+TGG | + | chr3_1:93171445-93171464 | Msa0388710:CDS | 25.0% |
| ! | GTGTAAAGATGATAGAATTT+AGG | - | chr3_1:93171481-93171500 | None:intergenic | 25.0% |
| ! | CTCTATATTCTTATGTAAAC+AGG | + | chr3_1:93171553-93171572 | Msa0388710:intron | 25.0% |
| ! | TATGAACATGTTCATCATTA+GGG | - | chr3_1:93171628-93171647 | None:intergenic | 25.0% |
| ! | TTATGAACATGTTCATCATT+AGG | - | chr3_1:93171629-93171648 | None:intergenic | 25.0% |
| !!! | AGTTAAAGCTTATTTTCCAT+TGG | + | chr3_1:93171721-93171740 | Msa0388710:CDS | 25.0% |
| !!! | GTTAAAGCTTATTTTCCATT+GGG | + | chr3_1:93171722-93171741 | Msa0388710:CDS | 25.0% |
| ! | TTATCCTGCTGTATTTATTA+AGG | + | chr3_1:93171829-93171848 | Msa0388710:CDS | 25.0% |
| !!! | GAAGAATGCCTAAATTTTTT+AGG | - | chr3_1:93171889-93171908 | None:intergenic | 25.0% |
| !!! | GAAACGTTTGTGATGTTTTT+TGG | - | chr3_1:93167423-93167442 | None:intergenic | 30.0% |
| ATCTTGTGAAGATAAAGCTT+TGG | - | chr3_1:93167510-93167529 | None:intergenic | 30.0% | |
| ! | CAATGAATTTGGTGATCATT+TGG | + | chr3_1:93167772-93167791 | Msa0388710:CDS | 30.0% |
| GGAATATGAAGTTGAAGATT+TGG | + | chr3_1:93167793-93167812 | Msa0388710:CDS | 30.0% | |
| CAATACCTTGCATAAACAAA+TGG | - | chr3_1:93167956-93167975 | None:intergenic | 30.0% | |
| CATTTGTTTATGCAAGGTAT+TGG | + | chr3_1:93167954-93167973 | Msa0388710:CDS | 30.0% | |
| GGTTAAGTAGTAGAAAAAAG+AGG | + | chr3_1:93168104-93168123 | Msa0388710:CDS | 30.0% | |
| AGTAGTAGAAAAAAGAGGAT+AGG | + | chr3_1:93168109-93168128 | Msa0388710:CDS | 30.0% | |
| !!! | CTATTGAACTCTTTTGGTTT+TGG | - | chr3_1:93168214-93168233 | None:intergenic | 30.0% |
| CAAAACCAAAAGAGTTCAAT+AGG | + | chr3_1:93168212-93168231 | Msa0388710:CDS | 30.0% | |
| !! | AATGAGAGGTTTTATGGTTT+TGG | + | chr3_1:93168262-93168281 | Msa0388710:CDS | 30.0% |
| !! | ATGAGAGGTTTTATGGTTTT+GGG | + | chr3_1:93168263-93168282 | Msa0388710:CDS | 30.0% |
| ATATGAATTTCAAGGGGAAA+AGG | + | chr3_1:93168299-93168318 | Msa0388710:CDS | 30.0% | |
| TATGAATTTCAAGGGGAAAA+GGG | + | chr3_1:93168300-93168319 | Msa0388710:CDS | 30.0% | |
| TTAGTTCAAGAACAAGGTAT+TGG | + | chr3_1:93168331-93168350 | Msa0388710:CDS | 30.0% | |
| ! | TTTTGATGTCATGTAGAATG+GGG | - | chr3_1:93168634-93168653 | None:intergenic | 30.0% |
| TCTACATGACATCAAAAATG+AGG | + | chr3_1:93168637-93168656 | Msa0388710:CDS | 30.0% | |
| !! | AAGTTTTGTAAGATCGAAGA+TGG | - | chr3_1:93168691-93168710 | None:intergenic | 30.0% |
| !! | GATTGATGGTGTAATAACTT+AGG | + | chr3_1:93168880-93168899 | Msa0388710:intron | 30.0% |
| ATATACGGAAACTCAATTGA+AGG | + | chr3_1:93169080-93169099 | Msa0388710:CDS | 30.0% | |
| TATACGGAAACTCAATTGAA+GGG | + | chr3_1:93169081-93169100 | Msa0388710:CDS | 30.0% | |
| AAATGTTCAATTAGGTCACA+AGG | - | chr3_1:93169128-93169147 | None:intergenic | 30.0% | |
| TTCTTAATTCATCCCAAACA+CGG | - | chr3_1:93169241-93169260 | None:intergenic | 30.0% | |
| ! | AATGGCCGAAAATTATTTCT+CGG | + | chr3_1:93169323-93169342 | Msa0388710:intron | 30.0% |
| TTTACTTATTGAAACTGTGC+AGG | + | chr3_1:93169402-93169421 | Msa0388710:CDS | 30.0% | |
| AAGTGGATGAACAAAGATAT+TGG | + | chr3_1:93169479-93169498 | Msa0388710:CDS | 30.0% | |
| AGTGGATGAACAAAGATATT+GGG | + | chr3_1:93169480-93169499 | Msa0388710:CDS | 30.0% | |
| !! | TGATTAAAGAGAAGCATTAC+CGG | - | chr3_1:93169580-93169599 | None:intergenic | 30.0% |
| GTCAAACAAAATGATAGTAC+AGG | + | chr3_1:93169698-93169717 | Msa0388710:intron | 30.0% | |
| ! | ATTGTTTTCTCTGACACTAT+AGG | + | chr3_1:93169762-93169781 | Msa0388710:intron | 30.0% |
| ! | CAAAAAGAGAAACCTTTTTG+AGG | + | chr3_1:93169801-93169820 | Msa0388710:CDS | 30.0% |
| ! | CAATAATGGGAATGCATATA+TGG | + | chr3_1:93169855-93169874 | Msa0388710:CDS | 30.0% |
| CAAACAGATTCTACTTGAAA+TGG | + | chr3_1:93169942-93169961 | Msa0388710:CDS | 30.0% | |
| GAGAACAAAACGATATAACA+TGG | + | chr3_1:93170374-93170393 | Msa0388710:intron | 30.0% | |
| GACAGTGTAAAATATCTTCA+CGG | - | chr3_1:93170425-93170444 | None:intergenic | 30.0% | |
| ! | ATTTTCTACTTCACATATCC+AGG | + | chr3_1:93170619-93170638 | Msa0388710:intron | 30.0% |
| ATAACAGATATCCTGAACTA+TGG | + | chr3_1:93170662-93170681 | Msa0388710:CDS | 30.0% | |
| TAACAGATATCCTGAACTAT+GGG | + | chr3_1:93170663-93170682 | Msa0388710:CDS | 30.0% | |
| AGAATGGAAAAGTAAATCCT+TGG | + | chr3_1:93170711-93170730 | Msa0388710:CDS | 30.0% | |
| !! | GGTATTTTTGCTTACTTCAT+GGG | - | chr3_1:93171037-93171056 | None:intergenic | 30.0% |
| !! | AGGTATTTTTGCTTACTTCA+TGG | - | chr3_1:93171038-93171057 | None:intergenic | 30.0% |
| TGATGAGTATAATTGTGCTA+AGG | - | chr3_1:93171107-93171126 | None:intergenic | 30.0% | |
| ! | TTTGATGGTTTGAGTAAAAC+TGG | - | chr3_1:93171382-93171401 | None:intergenic | 30.0% |
| CTTGAGTTATCAACAATTCT+TGG | + | chr3_1:93171649-93171668 | Msa0388710:CDS | 30.0% | |
| AGTTATCAACAATTCTTGGT+TGG | + | chr3_1:93171653-93171672 | Msa0388710:CDS | 30.0% | |
| ! | ATTAAGGTTGGTTCCATTAT+TGG | + | chr3_1:93171845-93171864 | Msa0388710:intron | 30.0% |
| CAAAAAGGTTTCTCCAATAA+TGG | - | chr3_1:93171861-93171880 | None:intergenic | 30.0% | |
| ! | AATGAAGCATTCATTGAAGA+AGG | + | chr3_1:93171909-93171928 | Msa0388710:intron | 30.0% |
| AATTGATGAATAGAGAGCCT+TGG | - | chr3_1:93167487-93167506 | None:intergenic | 35.0% | |
| ! | GCAATGATTTTCAGCTTTCT+TGG | + | chr3_1:93167546-93167565 | Msa0388710:CDS | 35.0% |
| CTCAGAAAACTAGACCAATT+TGG | + | chr3_1:93167609-93167628 | Msa0388710:CDS | 35.0% | |
| ACAGAGATTGAAGAAAGTAG+AGG | + | chr3_1:93167677-93167696 | Msa0388710:CDS | 35.0% | |
| CAATCAGAAAAACAAGCATG+AGG | + | chr3_1:93167985-93168004 | Msa0388710:CDS | 35.0% | |
| TTGTAAATTCCAGAAGCTTC+TGG | - | chr3_1:93168070-93168089 | None:intergenic | 35.0% | |
| !! | AGAAGCTTCTGGAATTTACA+AGG | + | chr3_1:93168069-93168088 | Msa0388710:CDS | 35.0% |
| !! | GAAGCTTCTGGAATTTACAA+GGG | + | chr3_1:93168070-93168089 | Msa0388710:CDS | 35.0% |
| TTTACAAGGGTTTCAAGAAG+AGG | + | chr3_1:93168083-93168102 | Msa0388710:CDS | 35.0% | |
| GTAGAAAAAAGAGGATAGGT+TGG | + | chr3_1:93168113-93168132 | Msa0388710:CDS | 35.0% | |
| !! | GTTTGTATTGGTTTCTTCAG+TGG | + | chr3_1:93168162-93168181 | Msa0388710:CDS | 35.0% |
| ! | CAAACCCTATTGAACTCTTT+TGG | - | chr3_1:93168220-93168239 | None:intergenic | 35.0% |
| CAAAAGAGTTCAATAGGGTT+TGG | + | chr3_1:93168218-93168237 | Msa0388710:CDS | 35.0% | |
| ATGAAAGTGATGAGAATGAG+AGG | + | chr3_1:93168248-93168267 | Msa0388710:CDS | 35.0% | |
| ! | GATGAGAATGAGAGGTTTTA+TGG | + | chr3_1:93168256-93168275 | Msa0388710:CDS | 35.0% |
| !! | TGAGAGGTTTTATGGTTTTG+GGG | + | chr3_1:93168264-93168283 | Msa0388710:CDS | 35.0% |
| CCTTGTTCTTGAACTAAGAT+AGG | - | chr3_1:93168328-93168347 | None:intergenic | 35.0% | |
| CCTATCTTAGTTCAAGAACA+AGG | + | chr3_1:93168325-93168344 | Msa0388710:CDS | 35.0% | |
| AAGTTAGCAGCTAAAGTGAT+AGG | - | chr3_1:93168370-93168389 | None:intergenic | 35.0% | |
| TATCACTTTAGCTGCTAACT+TGG | + | chr3_1:93168369-93168388 | Msa0388710:CDS | 35.0% | |
| ACACAATGATAGCCTTTCAT+TGG | + | chr3_1:93168564-93168583 | Msa0388710:intron | 35.0% | |
| AAAAATGAGGTCTCTTTACC+TGG | + | chr3_1:93168650-93168669 | Msa0388710:CDS | 35.0% | |
| TGGTATAATCATATCCTTCC+AGG | - | chr3_1:93168671-93168690 | None:intergenic | 35.0% | |
| !! | TGTAATAACTTAGGTGCTGA+TGG | + | chr3_1:93168889-93168908 | Msa0388710:intron | 35.0% |
| ! | GTTTCCAATTTTCTGTACAC+TGG | + | chr3_1:93169048-93169067 | Msa0388710:intron | 35.0% |
| GAACATTTCACAGAAACCAT+TGG | + | chr3_1:93169140-93169159 | Msa0388710:CDS | 35.0% | |
| ATTTCACAGAAACCATTGGA+AGG | + | chr3_1:93169144-93169163 | Msa0388710:CDS | 35.0% | |
| TTCCAGAGTGGATAATATCT+GGG | + | chr3_1:93169177-93169196 | Msa0388710:CDS | 35.0% | |
| ! | ATAATATCTGGGGCTATAGT+TGG | + | chr3_1:93169188-93169207 | Msa0388710:CDS | 35.0% |
| !!! | TTCATTGAGTGTTTTGGTGA+GGG | - | chr3_1:93169304-93169323 | None:intergenic | 35.0% |
| !!! | TTTCATTGAGTGTTTTGGTG+AGG | - | chr3_1:93169305-93169324 | None:intergenic | 35.0% |
| CACCAAAACACTCAATGAAA+TGG | + | chr3_1:93169305-93169324 | Msa0388710:intron | 35.0% | |
| ! | TCGCAAACTTCTGAGAAATA+TGG | - | chr3_1:93169372-93169391 | None:intergenic | 35.0% |
| TTATTGAAACTGTGCAGGAT+TGG | + | chr3_1:93169407-93169426 | Msa0388710:CDS | 35.0% | |
| TATTGAAACTGTGCAGGATT+GGG | + | chr3_1:93169408-93169427 | Msa0388710:CDS | 35.0% | |
| GTGGATGAACAAAGATATTG+GGG | + | chr3_1:93169481-93169500 | Msa0388710:CDS | 35.0% | |
| ATGAACAAAGATATTGGGGT+TGG | + | chr3_1:93169485-93169504 | Msa0388710:CDS | 35.0% | |
| CAATCGTGATCTTCCTAATA+TGG | - | chr3_1:93169726-93169745 | None:intergenic | 35.0% | |
| TATTAGGAAGATCACGATTG+CGG | + | chr3_1:93169726-93169745 | Msa0388710:intron | 35.0% | |
| !! | AAAGAGAAACCTTTTTGAGG+AGG | + | chr3_1:93169804-93169823 | Msa0388710:CDS | 35.0% |
| ! | TGAACCAAGTTGCAGTTTTT+GGG | - | chr3_1:93169924-93169943 | None:intergenic | 35.0% |
| ! | TTGAACCAAGTTGCAGTTTT+TGG | - | chr3_1:93169925-93169944 | None:intergenic | 35.0% |
| ACAGATTCTACTTGAAATGG+TGG | + | chr3_1:93169945-93169964 | Msa0388710:CDS | 35.0% | |
| !!! | TTAGAAAACCCTTTTGAAGC+AGG | - | chr3_1:93170097-93170116 | None:intergenic | 35.0% |
| TGTAGAAAACTCACTCCTAA+TGG | + | chr3_1:93170323-93170342 | Msa0388710:intron | 35.0% | |
| AACAATCACTAGCTCATACT+TGG | - | chr3_1:93170591-93170610 | None:intergenic | 35.0% | |
| !!! | CACAATCTCTCTGTTGATTT+TGG | - | chr3_1:93170689-93170708 | None:intergenic | 35.0% |
| CAAAATCAACAGAGAGATTG+TGG | + | chr3_1:93170687-93170706 | Msa0388710:CDS | 35.0% | |
| ! | TAAATCCTTGGACAAGTTGA+AGG | + | chr3_1:93170723-93170742 | Msa0388710:CDS | 35.0% |
| TTGAAGGAAGACAAAGAAGA+TGG | + | chr3_1:93170739-93170758 | Msa0388710:CDS | 35.0% | |
| !!! | ATGGTTTGGTTTTCTTCATG+AGG | + | chr3_1:93170758-93170777 | Msa0388710:CDS | 35.0% |
| !!! | TGGTTTGGTTTTCTTCATGA+GGG | + | chr3_1:93170759-93170778 | Msa0388710:CDS | 35.0% |
| !! | TTTTAGAGATAGCCCGAAAT+GGG | + | chr3_1:93170786-93170805 | Msa0388710:CDS | 35.0% |
| !! | ATTTTGGGAAGGAGATCAAA+TGG | + | chr3_1:93170816-93170835 | Msa0388710:CDS | 35.0% |
| GGAATAAAGAGTTCTGTTGT+TGG | + | chr3_1:93170859-93170878 | Msa0388710:CDS | 35.0% | |
| TTACTTAGCAGTGGAATTTC+TGG | + | chr3_1:93170883-93170902 | Msa0388710:CDS | 35.0% | |
| TCCAATGTCACTGTGATTAA+AGG | - | chr3_1:93170914-93170933 | None:intergenic | 35.0% | |
| TTTAATCACAGTGACATTGG+AGG | + | chr3_1:93170913-93170932 | Msa0388710:CDS | 35.0% | |
| !! | CCATGCTGTGTATATTTTTG+CGG | - | chr3_1:93171426-93171445 | None:intergenic | 35.0% |
| TTACAGAATTCAACTGGTGA+AGG | + | chr3_1:93171451-93171470 | Msa0388710:CDS | 35.0% | |
| AACTCAGCAGGCTTATAAAA+TGG | + | chr3_1:93171526-93171545 | Msa0388710:intron | 35.0% | |
| CATGTTCATCATTAGGGTAA+TGG | - | chr3_1:93171622-93171641 | None:intergenic | 35.0% | |
| TTCTTTCCTTTGTCAAGAAC+AGG | - | chr3_1:93171698-93171717 | None:intergenic | 35.0% | |
| !!! | GGAAAAGTATTTTCCGAACA+AGG | + | chr3_1:93171776-93171795 | Msa0388710:CDS | 35.0% |
| AATACAGCAGGATAACCTAT+TGG | - | chr3_1:93171824-93171843 | None:intergenic | 35.0% | |
| CCAACCTTAATAAATACAGC+AGG | - | chr3_1:93171836-93171855 | None:intergenic | 35.0% | |
| CCTGCTGTATTTATTAAGGT+TGG | + | chr3_1:93171833-93171852 | Msa0388710:intron | 35.0% | |
| AATAGAGAGCCTTGGACATT+AGG | - | chr3_1:93167479-93167498 | None:intergenic | 40.0% | |
| CTTTCTTGGTCCACAATCAA+TGG | + | chr3_1:93167560-93167579 | Msa0388710:CDS | 40.0% | |
| ! | AAAATGCCCTCCATTGATTG+TGG | - | chr3_1:93167573-93167592 | None:intergenic | 40.0% |
| CCTGAGATTGTAGACCAAAT+TGG | - | chr3_1:93167626-93167645 | None:intergenic | 40.0% | |
| CCAATTTGGTCTACAATCTC+AGG | + | chr3_1:93167623-93167642 | Msa0388710:CDS | 40.0% | |
| CTTCCTGTGATCAACAAAGT+AGG | - | chr3_1:93167854-93167873 | None:intergenic | 40.0% | |
| CTACTTTGTTGATCACAGGA+AGG | + | chr3_1:93167852-93167871 | Msa0388710:CDS | 40.0% | |
| AAGGGCCATTTGTTTATGCA+AGG | + | chr3_1:93167948-93167967 | Msa0388710:CDS | 40.0% | |
| CAGAAAAACAAGCATGAGGT+TGG | + | chr3_1:93167989-93168008 | Msa0388710:CDS | 40.0% | |
| !! | AAAAGAGGATAGGTTGGTGT+TGG | + | chr3_1:93168119-93168138 | Msa0388710:CDS | 40.0% |
| GAAACCAATACAAACCCTCT+CGG | - | chr3_1:93168157-93168176 | None:intergenic | 40.0% | |
| !! | TGTATTGGTTTCTTCAGTGG+AGG | + | chr3_1:93168165-93168184 | Msa0388710:CDS | 40.0% |
| !! | CAAGAACAAGGTATTGGAAG+AGG | + | chr3_1:93168337-93168356 | Msa0388710:CDS | 40.0% |
| ! | CTGCTAACTTGGTTAGTTAC+AGG | + | chr3_1:93168380-93168399 | Msa0388710:CDS | 40.0% |
| ! | TGTGAGTGTTGTACATCTCA+GGG | - | chr3_1:93168472-93168491 | None:intergenic | 40.0% |
| !! | AGCCTTTCATTGGTATTGAC+AGG | + | chr3_1:93168574-93168593 | Msa0388710:intron | 40.0% |
| !! | GCCTTTCATTGGTATTGACA+GGG | + | chr3_1:93168575-93168594 | Msa0388710:intron | 40.0% |
| ACTTGACAGAGTACAGATAC+AGG | + | chr3_1:93168707-93168726 | Msa0388710:CDS | 40.0% | |
| ! | TTTTGATACACCGTCGTTGT+AGG | + | chr3_1:93168757-93168776 | Msa0388710:intron | 40.0% |
| TGTAAAAGGTCCTACAACGA+CGG | - | chr3_1:93168770-93168789 | None:intergenic | 40.0% | |
| !! | AATAACTTAGGTGCTGATGG+CGG | + | chr3_1:93168892-93168911 | Msa0388710:intron | 40.0% |
| AGCTCCAGTGTACAGAAAAT+TGG | - | chr3_1:93169055-93169074 | None:intergenic | 40.0% | |
| CTTCCAGAGTGGATAATATC+TGG | + | chr3_1:93169176-93169195 | Msa0388710:CDS | 40.0% | |
| TCCAGAGTGGATAATATCTG+GGG | + | chr3_1:93169178-93169197 | Msa0388710:CDS | 40.0% | |
| TGTAACCAAAATCCTGAGAC+AGG | - | chr3_1:93169275-93169294 | None:intergenic | 40.0% | |
| !!! | TGTCTCAGGATTTTGGTTAC+AGG | + | chr3_1:93169274-93169293 | Msa0388710:CDS | 40.0% |
| ! | GGCCATTTCATTGAGTGTTT+TGG | - | chr3_1:93169310-93169329 | None:intergenic | 40.0% |
| CTCACAACTTTGGTGGAATT+GGG | + | chr3_1:93169456-93169475 | Msa0388710:CDS | 40.0% | |
| ACAAAGATATTGGGGTTGGA+AGG | + | chr3_1:93169489-93169508 | Msa0388710:CDS | 40.0% | |
| ! | GATAGTACAGGTGCCATATT+AGG | + | chr3_1:93169710-93169729 | Msa0388710:intron | 40.0% |
| ! | ACTGTTTTGCCTCCTCAAAA+AGG | - | chr3_1:93169816-93169835 | None:intergenic | 40.0% |
| !! | TTTTGAGGAGGCAAAACAGT+TGG | + | chr3_1:93169816-93169835 | Msa0388710:CDS | 40.0% |
| GGCAAAACAGTTGGACATAT+TGG | + | chr3_1:93169825-93169844 | Msa0388710:CDS | 40.0% | |
| !! | CTACTTGAAATGGTGGATGA+CGG | + | chr3_1:93169952-93169971 | Msa0388710:CDS | 40.0% |
| TGAATATAGAACCGCGTCAA+CGG | - | chr3_1:93170016-93170035 | None:intergenic | 40.0% | |
| !!! | AAAACCCTTTTGAAGCAGGT+AGG | - | chr3_1:93170093-93170112 | None:intergenic | 40.0% |
| GTCACACTCACACATATGAT+TGG | + | chr3_1:93170505-93170524 | Msa0388710:intron | 40.0% | |
| GCTGAAATAGAATCTTCACC+TGG | - | chr3_1:93170640-93170659 | None:intergenic | 40.0% | |
| !! | TTGATTTTGGCCCATAGTTC+AGG | - | chr3_1:93170676-93170695 | None:intergenic | 40.0% |
| ACAGAGAGATTGTGGAAGAA+TGG | + | chr3_1:93170695-93170714 | Msa0388710:CDS | 40.0% | |
| GGAAGACAAAGAAGATGGTT+TGG | + | chr3_1:93170744-93170763 | Msa0388710:CDS | 40.0% | |
| !!! | GTTTTAGAGATAGCCCGAAA+TGG | + | chr3_1:93170785-93170804 | Msa0388710:CDS | 40.0% |
| TTTAGAGATAGCCCGAAATG+GGG | + | chr3_1:93170787-93170806 | Msa0388710:CDS | 40.0% | |
| AAAATAGCATCCCCCATTTC+GGG | - | chr3_1:93170801-93170820 | None:intergenic | 40.0% | |
| CAAAATAGCATCCCCCATTT+CGG | - | chr3_1:93170802-93170821 | None:intergenic | 40.0% | |
| !!! | GAAATGGGGGATGCTATTTT+GGG | + | chr3_1:93170801-93170820 | Msa0388710:CDS | 40.0% |
| AAGGAGATCAAATGGTGAGT+TGG | + | chr3_1:93170824-93170843 | Msa0388710:CDS | 40.0% | |
| !! | GTTGTTGGTTTACTTAGCAG+TGG | + | chr3_1:93170874-93170893 | Msa0388710:CDS | 40.0% |
| GCCTTTAATCACAGTGACAT+TGG | + | chr3_1:93170910-93170929 | Msa0388710:CDS | 40.0% | |
| !! | GTCAAGAATTGCTTTTGCGT+TGG | + | chr3_1:93170977-93170996 | Msa0388710:CDS | 40.0% |
| !! | AGAATTGCTTTTGCGTTGGA+TGG | + | chr3_1:93170981-93171000 | Msa0388710:CDS | 40.0% |
| ! | TTTTGCTTACTTCATGGGTG+CGG | - | chr3_1:93171032-93171051 | None:intergenic | 40.0% |
| !! | CAACTCACTTTAGAGTGTAG+AGG | + | chr3_1:93171222-93171241 | Msa0388710:intron | 40.0% |
| TAAAACTGGCTGTTGCATGA+TGG | - | chr3_1:93171368-93171387 | None:intergenic | 40.0% | |
| CAAAGTGTGACAGAGTTTGA+TGG | - | chr3_1:93171397-93171416 | None:intergenic | 40.0% | |
| CCGCAAAAATATACACAGCA+TGG | + | chr3_1:93171423-93171442 | Msa0388710:CDS | 40.0% | |
| ! | TGCTGAGTTTGCTTTGTACA+TGG | - | chr3_1:93171515-93171534 | None:intergenic | 40.0% |
| ATGTACAAAGCAAACTCAGC+AGG | + | chr3_1:93171514-93171533 | Msa0388710:intron | 40.0% | |
| !! | CATTAGGGTAATGGAGAAAG+AGG | - | chr3_1:93171613-93171632 | None:intergenic | 40.0% |
| CCATGATTCACTTCCTTGTT+CGG | - | chr3_1:93171792-93171811 | None:intergenic | 40.0% | |
| TCATGGATAGAAGCTCCAAT+AGG | + | chr3_1:93171806-93171825 | Msa0388710:CDS | 40.0% | |
| TCTTACAAGATGGCAAACCA+AGG | + | chr3_1:93171979-93171998 | Msa0388710:CDS | 40.0% | |
| TGGACATTAGGAATGGTGGT+TGG | - | chr3_1:93167467-93167486 | None:intergenic | 45.0% | |
| ACCACCATTCCTAATGTCCA+AGG | + | chr3_1:93167467-93167486 | Msa0388710:CDS | 45.0% | |
| AGAGCCTTGGACATTAGGAA+TGG | - | chr3_1:93167474-93167493 | None:intergenic | 45.0% | |
| TCTTGGTCCACAATCAATGG+AGG | + | chr3_1:93167563-93167582 | Msa0388710:CDS | 45.0% | |
| CTTGGTCCACAATCAATGGA+GGG | + | chr3_1:93167564-93167583 | Msa0388710:CDS | 45.0% | |
| !! | TGCTTTTGTTTCAGCTGCAG+TGG | + | chr3_1:93167649-93167668 | Msa0388710:CDS | 45.0% |
| CCTGTGATCAACAAAGTAGG+AGG | - | chr3_1:93167851-93167870 | None:intergenic | 45.0% | |
| CCTCCTACTTTGTTGATCAC+AGG | + | chr3_1:93167848-93167867 | Msa0388710:CDS | 45.0% | |
| TCTTCAGTGGAGGATGAAAG+TGG | + | chr3_1:93168175-93168194 | Msa0388710:CDS | 45.0% | |
| ! | GTGTGAGTGTTGTACATCTC+AGG | - | chr3_1:93168473-93168492 | None:intergenic | 45.0% |
| CAACAATTTGCGCTAGACTC+CGG | + | chr3_1:93168504-93168523 | Msa0388710:intron | 45.0% | |
| GCCCTGTCAATACCAATGAA+AGG | - | chr3_1:93168579-93168598 | None:intergenic | 45.0% | |
| !! | TTCATTGGTATTGACAGGGC+AGG | + | chr3_1:93168579-93168598 | Msa0388710:intron | 45.0% |
| GATGTCATGTAGAATGGGGA+AGG | - | chr3_1:93168630-93168649 | None:intergenic | 45.0% | |
| ATGAGGTCTCTTTACCTGGA+AGG | + | chr3_1:93168654-93168673 | Msa0388710:CDS | 45.0% | |
| CACTGGAGCTTGCAGATATA+CGG | + | chr3_1:93169065-93169084 | Msa0388710:intron | 45.0% | |
| ACGGAAACTCAATTGAAGGG+CGG | + | chr3_1:93169084-93169103 | Msa0388710:CDS | 45.0% | |
| ATTGAAGGGCGGATATTGCA+TGG | + | chr3_1:93169095-93169114 | Msa0388710:CDS | 45.0% | |
| TTGAAGGGCGGATATTGCAT+GGG | + | chr3_1:93169096-93169115 | Msa0388710:CDS | 45.0% | |
| ! | ATTATCCACTCTGGAAGCAC+TGG | - | chr3_1:93169173-93169192 | None:intergenic | 45.0% |
| ACTTATGACGTTCCTGTCTC+AGG | + | chr3_1:93169260-93169279 | Msa0388710:CDS | 45.0% | |
| ! | ACGTTCCTGTCTCAGGATTT+TGG | + | chr3_1:93169267-93169286 | Msa0388710:CDS | 45.0% |
| AAACTGTGCAGGATTGGGTA+GGG | + | chr3_1:93169413-93169432 | Msa0388710:CDS | 45.0% | |
| CCAAAGTTGTGAGCCAATCA+TGG | - | chr3_1:93169449-93169468 | None:intergenic | 45.0% | |
| ! | CCATGATTGGCTCACAACTT+TGG | + | chr3_1:93169446-93169465 | Msa0388710:CDS | 45.0% |
| ! | TGATTGGCTCACAACTTTGG+TGG | + | chr3_1:93169449-93169468 | Msa0388710:CDS | 45.0% |
| GCTCACAACTTTGGTGGAAT+TGG | + | chr3_1:93169455-93169474 | Msa0388710:CDS | 45.0% | |
| ACTTTGGTGGAATTGGGAAG+TGG | + | chr3_1:93169462-93169481 | Msa0388710:CDS | 45.0% | |
| CCTACATCGAAGGCAGTATT+TGG | - | chr3_1:93169883-93169902 | None:intergenic | 45.0% | |
| CCAAATACTGCCTTCGATGT+AGG | + | chr3_1:93169880-93169899 | Msa0388710:CDS | 45.0% | |
| ATCGAGCATTCCTACATCGA+AGG | - | chr3_1:93169893-93169912 | None:intergenic | 45.0% | |
| CTCACCCAAAAACTGCAACT+TGG | + | chr3_1:93169917-93169936 | Msa0388710:CDS | 45.0% | |
| !! | AGAGGATGGATGGCTGATTT+TGG | + | chr3_1:93169979-93169998 | Msa0388710:CDS | 45.0% |
| AATATAGAACCGCGTCAACG+GGG | - | chr3_1:93170014-93170033 | None:intergenic | 45.0% | |
| GAATATAGAACCGCGTCAAC+GGG | - | chr3_1:93170015-93170034 | None:intergenic | 45.0% | |
| GTTGACGCGGTTCTATATTC+AGG | + | chr3_1:93170015-93170034 | Msa0388710:CDS | 45.0% | |
| AACCTCCTACCTGCTTCAAA+AGG | + | chr3_1:93170085-93170104 | Msa0388710:intron | 45.0% | |
| ACCTCCTACCTGCTTCAAAA+GGG | + | chr3_1:93170086-93170105 | Msa0388710:intron | 45.0% | |
| GTCTTCCTTCAACTTGTCCA+AGG | - | chr3_1:93170731-93170750 | None:intergenic | 45.0% | |
| !! | TTGGTTTTCTTCATGAGGGC+TGG | + | chr3_1:93170763-93170782 | Msa0388710:CDS | 45.0% |
| TTAGAGATAGCCCGAAATGG+GGG | + | chr3_1:93170788-93170807 | Msa0388710:CDS | 45.0% | |
| !! | CGAAATGGGGGATGCTATTT+TGG | + | chr3_1:93170800-93170819 | Msa0388710:CDS | 45.0% |
| ! | GTGAGTTGGCAAGCAAATGA+TGG | + | chr3_1:93170838-93170857 | Msa0388710:CDS | 45.0% |
| ! | TGATGCTTTTCCTGCAACCA+GGG | + | chr3_1:93171335-93171354 | Msa0388710:intron | 45.0% |
| !! | TGCATGATGGTTTGTTTCCC+TGG | - | chr3_1:93171355-93171374 | None:intergenic | 45.0% |
| AAACTCTGTCACACTTTGCG+CGG | + | chr3_1:93171399-93171418 | Msa0388710:CDS | 45.0% | |
| AAACAGGAAGCAGCACAGAA+AGG | + | chr3_1:93171569-93171588 | Msa0388710:intron | 45.0% | |
| !! | TAGGGTAATGGAGAAAGAGG+TGG | - | chr3_1:93171610-93171629 | None:intergenic | 45.0% |
| !! | GGTTGGTTCTGAGTTTCTAG+TGG | + | chr3_1:93171670-93171689 | Msa0388710:CDS | 45.0% |
| GTGGTTCCTGTTCTTGACAA+AGG | + | chr3_1:93171689-93171708 | Msa0388710:CDS | 45.0% | |
| GTAGCAGTTGGCTGCATATT+TGG | + | chr3_1:93171750-93171769 | Msa0388710:CDS | 45.0% | |
| AGTTGGCTGCATATTTGGAC+AGG | + | chr3_1:93171755-93171774 | Msa0388710:CDS | 45.0% | |
| CCGAACAAGGAAGTGAATCA+TGG | + | chr3_1:93171789-93171808 | Msa0388710:CDS | 45.0% | |
| GAAGGATGAATGCCAACCAA+CGG | + | chr3_1:93171927-93171946 | Msa0388710:intron | 45.0% | |
| AAGGATGAATGCCAACCAAC+GGG | + | chr3_1:93171928-93171947 | Msa0388710:CDS | 45.0% | |
| !! | GGGACTAGTCTCTTACAAGA+TGG | + | chr3_1:93171969-93171988 | Msa0388710:CDS | 45.0% |
| TCTCAGCAGGATTCAAACCT+TGG | - | chr3_1:93171999-93172018 | None:intergenic | 45.0% | |
| ! | GAATGGTGGTTGGTGCAGAA+GGG | - | chr3_1:93167457-93167476 | None:intergenic | 50.0% |
| GCCTTGGACATTAGGAATGG+TGG | - | chr3_1:93167471-93167490 | None:intergenic | 50.0% | |
| !! | GTTGGTGTTGGTACCTATCG+AGG | + | chr3_1:93168131-93168150 | Msa0388710:CDS | 50.0% |
| GGAGGATGAAAGTGGAGTGA+TGG | + | chr3_1:93168183-93168202 | Msa0388710:CDS | 50.0% | |
| CGGAGTCTAGCGCAAATTGT+TGG | - | chr3_1:93168506-93168525 | None:intergenic | 50.0% | |
| !! | ATTGGTATTGACAGGGCAGG+AGG | + | chr3_1:93168582-93168601 | Msa0388710:intron | 50.0% |
| !! | AAGCACTGGTAGCCTTCCAA+TGG | - | chr3_1:93169159-93169178 | None:intergenic | 50.0% |
| GCCCCAGATATTATCCACTC+TGG | - | chr3_1:93169182-93169201 | None:intergenic | 50.0% | |
| TGGGGCTATAGTTGGAATGC+AGG | + | chr3_1:93169196-93169215 | Msa0388710:CDS | 50.0% | |
| GGGGCTATAGTTGGAATGCA+GGG | + | chr3_1:93169197-93169216 | Msa0388710:CDS | 50.0% | |
| GCTATAGTTGGAATGCAGGG+TGG | + | chr3_1:93169200-93169219 | Msa0388710:CDS | 50.0% | |
| GAAACTGTGCAGGATTGGGT+AGG | + | chr3_1:93169412-93169431 | Msa0388710:CDS | 50.0% | |
| GGGCAGAGAGAAACCATGAT+TGG | + | chr3_1:93169433-93169452 | Msa0388710:CDS | 50.0% | |
| ! | TTGCAATCCCTGTCTAGCTC+CGG | + | chr3_1:93169558-93169577 | Msa0388710:CDS | 50.0% |
| AGCATTACCGGAGCTAGACA+GGG | - | chr3_1:93169568-93169587 | None:intergenic | 50.0% | |
| AAGCATTACCGGAGCTAGAC+AGG | - | chr3_1:93169569-93169588 | None:intergenic | 50.0% | |
| !! | TGGATGGCTGATTTTGGCGA+AGG | + | chr3_1:93169985-93170004 | Msa0388710:CDS | 50.0% |
| !!! | ACCCTTTTGAAGCAGGTAGG+AGG | - | chr3_1:93170090-93170109 | None:intergenic | 50.0% |
| !!! | TGGGGGATGCTATTTTGGGA+AGG | + | chr3_1:93170805-93170824 | Msa0388710:CDS | 50.0% |
| TACTTCATGGGTGCGGAAGA+CGG | - | chr3_1:93171025-93171044 | None:intergenic | 50.0% | |
| ! | CTGATGCTTTTCCTGCAACC+AGG | + | chr3_1:93171334-93171353 | Msa0388710:intron | 50.0% |
| !! | TGGTTTGTTTCCCTGGTTGC+AGG | - | chr3_1:93171348-93171367 | None:intergenic | 50.0% |
| !! | GGTAATGGAGAAAGAGGTGG+CGG | - | chr3_1:93171607-93171626 | None:intergenic | 50.0% |
| CAACTGCTACTCTCTCCCAA+TGG | - | chr3_1:93171740-93171759 | None:intergenic | 50.0% | |
| CATTGGGAGAGAGTAGCAGT+TGG | + | chr3_1:93171738-93171757 | Msa0388710:CDS | 50.0% | |
| AGGATGAATGCCAACCAACG+GGG | + | chr3_1:93171929-93171948 | Msa0388710:CDS | 50.0% | |
| ! | GTGGTTGGTGCAGAAGGGAA+AGG | - | chr3_1:93167452-93167471 | None:intergenic | 55.0% |
| ! | GGAATGGTGGTTGGTGCAGA+AGG | - | chr3_1:93167458-93167477 | None:intergenic | 55.0% |
| GTGGTGTCTCCAGAAGCTTC+TGG | + | chr3_1:93168058-93168077 | Msa0388710:CDS | 55.0% | |
| GAGGCCGAGAGGGTTTGTAT+TGG | + | chr3_1:93168150-93168169 | Msa0388710:CDS | 55.0% | |
| TTGACAGGGCAGGAGGTGAT+TGG | + | chr3_1:93168589-93168608 | Msa0388710:intron | 55.0% | |
| CCAAACACGGCGTACAGCAT+CGG | - | chr3_1:93169228-93169247 | None:intergenic | 55.0% | |
| CGATGCTGTACGCCGTGTTT+GGG | + | chr3_1:93169226-93169245 | Msa0388710:CDS | 55.0% | |
| !! | ATGGTGGATGACGGAGTCAG+AGG | + | chr3_1:93169961-93169980 | Msa0388710:CDS | 55.0% |
| !! | TGGATGACGGAGTCAGAGGA+TGG | + | chr3_1:93169965-93169984 | Msa0388710:CDS | 55.0% |
| TGACGGAGTCAGAGGATGGA+TGG | + | chr3_1:93169969-93169988 | Msa0388710:CDS | 55.0% | |
| ! | AGAAAGAGGTGGCGGCATAC+AGG | - | chr3_1:93171599-93171618 | None:intergenic | 55.0% |
| GGATGAATGCCAACCAACGG+GGG | + | chr3_1:93171930-93171949 | Msa0388710:CDS | 55.0% | |
| AATGCCAACCAACGGGGGAT+GGG | + | chr3_1:93171935-93171954 | Msa0388710:CDS | 55.0% | |
| ATGTCGGCATCTCTCTCAGC+AGG | - | chr3_1:93172012-93172031 | None:intergenic | 55.0% | |
| TGGTACCTATCGAGGCCGAG+AGG | + | chr3_1:93168139-93168158 | Msa0388710:CDS | 60.0% | |
| GGTACCTATCGAGGCCGAGA+GGG | + | chr3_1:93168140-93168159 | Msa0388710:CDS | 60.0% | |
| CAAACCCTCTCGGCCTCGAT+AGG | - | chr3_1:93168147-93168166 | None:intergenic | 60.0% | |
| GGCTACCAGTGCTTCCAGAG+TGG | + | chr3_1:93169165-93169184 | Msa0388710:CDS | 60.0% | |
| CCGATGCTGTACGCCGTGTT+TGG | + | chr3_1:93169225-93169244 | Msa0388710:CDS | 60.0% | |
| ATAGAACCGCGTCAACGGGG+AGG | - | chr3_1:93170011-93170030 | None:intergenic | 60.0% | |
| TTCATGGGTGCGGAAGACGG+TGG | - | chr3_1:93171022-93171041 | None:intergenic | 60.0% | |
| GAATGCCAACCAACGGGGGA+TGG | + | chr3_1:93171934-93171953 | Msa0388710:CDS | 60.0% | |
| TAGACCCATCCCCCGTTGGT+TGG | - | chr3_1:93171942-93171961 | None:intergenic | 60.0% | |
| CCAACGGGGGATGGGTCTAG+CGG | + | chr3_1:93171943-93171962 | Msa0388710:CDS | 65.0% | |
| GGGGGATGGGTCTAGCGGAA+GGG | + | chr3_1:93171948-93171967 | Msa0388710:CDS | 65.0% | |
| GGGGATGGGTCTAGCGGAAG+GGG | + | chr3_1:93171949-93171968 | Msa0388710:CDS | 65.0% | |
| CGAAGGCCTCCCCGTTGACG+CGG | + | chr3_1:93170002-93170021 | Msa0388710:CDS | 70.0% | |
| CCGCTAGACCCATCCCCCGT+TGG | - | chr3_1:93171946-93171965 | None:intergenic | 70.0% | |
| CGGGGGATGGGTCTAGCGGA+AGG | + | chr3_1:93171947-93171966 | Msa0388710:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93167401 | 93172035 | 93167401 | ID=Msa0388710;Name=Msa0388710 |
| chr3_1 | mRNA | 93167401 | 93172035 | 93167401 | ID=Msa0388710-mRNA-1;Parent=Msa0388710;Name=Msa0388710-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.33|1|1|1|9|0|900 |
| chr3_1 | exon | 93167401 | 93168401 | 93167401 | ID=Msa0388710-mRNA-1:exon:26264;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93168596 | 93168728 | 93168596 | ID=Msa0388710-mRNA-1:exon:26265;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93169080 | 93169295 | 93169080 | ID=Msa0388710-mRNA-1:exon:26266;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93169382 | 93169579 | 93169382 | ID=Msa0388710-mRNA-1:exon:26267;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93169784 | 93170036 | 93169784 | ID=Msa0388710-mRNA-1:exon:26268;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93170641 | 93171041 | 93170641 | ID=Msa0388710-mRNA-1:exon:26269;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93171356 | 93171472 | 93171356 | ID=Msa0388710-mRNA-1:exon:26270;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93171575 | 93171850 | 93171575 | ID=Msa0388710-mRNA-1:exon:26271;Parent=Msa0388710-mRNA-1 |
| chr3_1 | exon | 93171928 | 93172035 | 93171928 | ID=Msa0388710-mRNA-1:exon:26272;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93167401 | 93168401 | 93167401 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93168596 | 93168728 | 93168596 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93169080 | 93169295 | 93169080 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93169382 | 93169579 | 93169382 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93169784 | 93170036 | 93169784 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93170641 | 93171041 | 93170641 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93171356 | 93171472 | 93171356 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93171575 | 93171850 | 93171575 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| chr3_1 | CDS | 93171928 | 93172035 | 93171928 | ID=Msa0388710-mRNA-1:cds;Parent=Msa0388710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
