AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0416320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416320 MtrunA17_Chr3g0112971 96.789 436 14 0 1 436 1 436 0.0 858
Msa0416320 MtrunA17_Chr5g0436281 77.285 383 87 0 54 436 1 383 0.0 626
Msa0416320 MtrunA17_Chr4g0058161 40.732 437 255 4 1 436 17 450 2.46e-113 340
Msa0416320 MtrunA17_Chr1g0184721 32.152 395 251 7 54 436 51 440 4.29e-51 178
Msa0416320 MtrunA17_Chr1g0198081 29.954 434 269 11 25 435 59 480 2.91e-45 163
Msa0416320 MtrunA17_Chr8g0387941 27.918 437 269 12 26 433 28 447 6.83e-44 159
Msa0416320 MtrunA17_Chr4g0027241 29.680 438 265 13 26 436 41 462 1.90e-41 152
Msa0416320 MtrunA17_Chr6g0459011 29.620 395 245 13 54 429 13 393 3.42e-26 109
Msa0416320 MtrunA17_Chr6g0458931 26.395 466 287 17 5 434 10 455 1.39e-25 108
Msa0416320 MtrunA17_Chr5g0422741 28.535 396 256 11 54 433 54 438 1.05e-24 105
Msa0416320 MtrunA17_Chr2g0331721 26.000 450 277 15 20 433 31 460 1.40e-24 105
Msa0416320 MtrunA17_Chr6g0459021 27.617 449 292 14 2 434 16 447 4.13e-24 103
Msa0416320 MtrunA17_Chr1g0198531 27.157 394 264 8 54 433 52 436 6.71e-24 103
Msa0416320 MtrunA17_Chr4g0057851 26.108 406 280 10 39 432 24 421 2.01e-23 101
Msa0416320 MtrunA17_Chr8g0376991 25.500 400 265 14 54 434 51 436 1.65e-22 99.4
Msa0416320 MtrunA17_Chr1g0198541 27.778 396 259 12 54 433 52 436 4.45e-22 98.2
Msa0416320 MtrunA17_Chr3g0122921 26.281 449 276 16 12 434 9 428 5.20e-22 97.8
Msa0416320 MtrunA17_Chr2g0328081 26.923 390 273 8 54 434 42 428 8.88e-22 97.1
Msa0416320 MtrunA17_Chr3g0130641 25.376 465 300 15 7 435 22 475 2.39e-21 96.3
Msa0416320 MtrunA17_Chr6g0458921 27.877 391 268 10 54 434 42 428 4.05e-21 95.1
Msa0416320 MtrunA17_Chr8g0384661 25.918 463 287 17 12 433 43 490 5.59e-21 95.1
Msa0416320 MtrunA17_Chr3g0125091 26.767 467 286 16 9 433 24 476 5.73e-21 95.1
Msa0416320 MtrunA17_Chr3g0077651 24.938 401 264 12 57 434 83 469 8.76e-21 94.4
Msa0416320 MtrunA17_Chr3g0140761 25.160 469 302 17 8 433 16 478 2.37e-20 93.2
Msa0416320 MtrunA17_Chr3g0130651 26.794 418 258 16 9 390 16 421 7.25e-20 91.7
Msa0416320 MtrunA17_Chr6g0459031 28.244 393 264 12 54 434 42 428 8.49e-20 91.3
Msa0416320 MtrunA17_Chr1g0159761 27.251 422 257 15 9 390 17 428 9.70e-20 91.3
Msa0416320 MtrunA17_Chr7g0230011 28.117 409 243 15 54 434 58 443 1.39e-19 90.5
Msa0416320 MtrunA17_Chr4g0037201 25.678 479 289 19 7 433 45 508 1.80e-19 90.9
Msa0416320 MtrunA17_Chr3g0125081 26.652 469 289 16 9 436 24 478 2.25e-19 90.1
Msa0416320 MtrunA17_Chr1g0206871 25.751 466 276 18 27 435 17 469 2.62e-19 90.1
Msa0416320 MtrunA17_Chr1g0146491 25.902 471 296 20 8 433 6 468 5.25e-19 89.0
Msa0416320 MtrunA17_Chr3g0125101 26.526 426 256 16 57 436 65 479 5.34e-19 89.0
Msa0416320 MtrunA17_Chr3g0143701 25.833 360 242 12 57 395 115 470 3.23e-16 80.9
Msa0416320 MtrunA17_Chr4g0038711 25.062 403 254 16 57 424 101 490 1.02e-15 79.3
Msa0416320 MtrunA17_Chr4g0027261 30.500 200 113 6 250 436 1 187 1.29e-15 75.1
Msa0416320 MtrunA17_Chr6g0459001 25.986 431 265 12 54 434 50 476 1.38e-15 78.6
Msa0416320 MtrunA17_Chr1g0146391 23.095 420 279 13 54 434 40 454 2.64e-15 77.8
Msa0416320 MtrunA17_Chr3g0103231 25.858 379 225 15 57 390 54 421 8.89e-15 76.3
Msa0416320 MtrunA17_Chr2g0293331 23.990 421 268 15 57 434 43 454 1.23e-14 75.5
Msa0416320 MtrunA17_Chr5g0430221 68.085 47 15 0 146 192 1 47 2.02e-14 70.5
Msa0416320 MtrunA17_Chr5g0406331 25.521 384 252 13 37 396 99 472 2.24e-14 75.1
Msa0416320 MtrunA17_Chr5g0406351 25.459 381 249 13 37 392 120 490 1.81e-13 72.4
Msa0416320 MtrunA17_Chr3g0103211 23.592 373 241 15 57 390 54 421 4.25e-13 70.9
Msa0416320 MtrunA17_Chr5g0447221 23.765 425 271 17 37 420 41 453 4.28e-13 70.9
Msa0416320 MtrunA17_Chr3g0103221 25.393 382 223 18 57 390 61 428 1.10e-12 69.7
Msa0416320 MtrunA17_Chr1g0146411 23.718 468 311 18 3 433 11 469 1.15e-12 69.7
Msa0416320 MtrunA17_Chr1g0206831 28.000 300 172 11 166 432 51 339 3.83e-12 67.4
Msa0416320 MtrunA17_Chr3g0103271 23.575 386 255 13 37 385 39 421 1.83e-11 65.9
Msa0416320 MtrunA17_Chr3g0140531 23.474 426 264 15 57 433 55 467 8.00e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416320 AT2G39890.2 70.998 431 123 1 6 436 14 442 0.0 653
Msa0416320 AT2G39890.1 70.998 431 123 1 6 436 14 442 0.0 653
Msa0416320 AT3G55740.1 71.496 421 120 0 16 436 19 439 0.0 645
Msa0416320 AT2G36590.1 68.287 432 133 1 9 436 5 436 0.0 622
Msa0416320 AT2G39890.3 70.757 383 112 0 54 436 1 383 0.0 583
Msa0416320 AT3G55740.2 70.496 383 113 0 54 436 1 383 0.0 575
Msa0416320 AT3G55740.3 70.496 383 113 0 54 436 1 383 0.0 575
Msa0416320 AT2G36590.2 67.937 315 97 1 9 319 5 319 8.46e-164 464
Msa0416320 AT1G08230.2 29.806 463 283 13 2 436 3 451 8.40e-45 162
Msa0416320 AT5G41800.1 27.397 438 274 12 26 435 27 448 4.73e-37 141
Msa0416320 AT1G08230.4 31.707 328 198 8 127 436 13 332 9.33e-34 129
Msa0416320 AT1G08230.6 31.707 328 198 8 127 436 13 332 9.33e-34 129
Msa0416320 AT1G08230.5 31.707 328 198 8 127 436 13 332 9.33e-34 129
Msa0416320 AT1G08230.3 31.707 328 198 8 127 436 32 351 1.32e-33 129
Msa0416320 AT1G24400.1 27.136 398 261 12 54 434 56 441 2.81e-25 107
Msa0416320 AT5G40780.1 25.275 455 298 12 8 434 6 446 6.19e-25 107
Msa0416320 AT5G40780.3 26.382 398 264 9 54 434 13 398 8.54e-25 105
Msa0416320 AT5G40780.2 26.382 398 264 9 54 434 13 398 8.54e-25 105
Msa0416320 AT1G67640.1 25.385 390 278 9 54 434 56 441 8.73e-23 100
Msa0416320 AT1G48640.1 25.431 464 301 15 1 434 5 453 1.32e-21 97.1
Msa0416320 AT5G09220.1 26.253 419 262 13 57 433 76 489 1.65e-21 97.1
Msa0416320 AT5G63850.1 24.628 471 290 18 7 433 13 462 1.85e-20 94.0
Msa0416320 AT1G25530.1 28.715 397 256 11 54 434 55 440 2.80e-20 93.2
Msa0416320 AT1G71680.1 25.885 452 303 13 2 434 10 448 8.67e-20 91.7
Msa0416320 AT1G44100.1 27.197 478 276 23 9 433 18 476 3.12e-19 90.1
Msa0416320 AT1G77380.1 26.329 395 241 17 57 410 60 445 1.13e-17 85.5
Msa0416320 AT1G58360.1 24.211 475 302 15 6 433 17 480 1.64e-17 85.1
Msa0416320 AT3G01760.1 24.719 445 298 12 6 423 3 437 2.00e-17 84.7
Msa0416320 AT1G61270.1 25.517 435 290 13 7 420 13 434 7.29e-17 82.8
Msa0416320 AT1G10010.2 26.042 480 290 20 4 436 14 475 1.34e-15 79.0
Msa0416320 AT1G10010.1 26.042 480 290 20 4 436 13 474 1.54e-15 79.0
Msa0416320 AT1G71680.2 26.269 335 229 11 2 323 10 339 3.95e-15 77.0

Find 129 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATTTGATGAGCAGTTTC+TGG 0.188300 3_2:-63114176 None:intergenic
AAATACTGGTTACATCATTT+TGG 0.194408 3_2:+63115907 Msa0416320:CDS
TGGTTACCTTTGCAGGATAC+TGG 0.253653 3_2:+63116995 Msa0416320:CDS
TTATTTAATTGTAGGTAAAA+AGG 0.256204 3_2:+63115838 Msa0416320:intron
ATCTTTCAGCTCTTGGAGTT+TGG 0.276364 3_2:+63116344 Msa0416320:CDS
AAGTCCGATGTATGAGTATT+TGG 0.293374 3_2:+63117233 Msa0416320:CDS
GAAGAAGTAGCTTAAATTTA+CGG 0.297415 3_2:+63114044 Msa0416320:five_prime_UTR
AGCCGCTATGAATGTGTTAA+AGG 0.301338 3_2:-63117337 None:intergenic
ATTCCTCATCTTTCAGCTCT+TGG 0.319082 3_2:+63116337 Msa0416320:CDS
TGGTTCCTCTTGGTTGGGTA+GGG 0.321672 3_2:+63115609 Msa0416320:CDS
TCTTTGCCTTGTAGTACATA+TGG 0.322707 3_2:-63117437 None:intergenic
ATTGCTATGCTCCATGAATA+TGG 0.328776 3_2:+63115686 Msa0416320:CDS
ATGTACATGGTTACCTTTGC+AGG 0.331651 3_2:+63116988 Msa0416320:CDS
TTTGCAGGATACTGGGCTTA+TGG 0.333787 3_2:+63117003 Msa0416320:CDS
TGGATACTCAGGGACCATTA+TGG 0.339605 3_2:+63115589 Msa0416320:CDS
CCATTATGGTTCCTCTTGGT+TGG 0.339833 3_2:+63115603 Msa0416320:CDS
TTCATCATGTTCTTGACAAC+TGG 0.353000 3_2:-63116928 None:intergenic
TCAGCTCTTGGAGTTTGGTT+GGG 0.354431 3_2:+63116349 Msa0416320:CDS
TTCAGCTCTTGGAGTTTGGT+TGG 0.369188 3_2:+63116348 Msa0416320:CDS
GAGTATTTGGATACTAGATA+TGG 0.371361 3_2:+63117246 Msa0416320:CDS
GATCTTGCTGGATATGTATA+TGG 0.372159 3_2:+63115734 Msa0416320:CDS
TTGAAGGAAGGCTGTAATAT+TGG 0.378244 3_2:-63117088 None:intergenic
GTGCACGCTATTCAGCAAAT+AGG 0.379972 3_2:-63117040 None:intergenic
GTCTTGTCCCTCCATATTCA+TGG 0.380371 3_2:-63115697 None:intergenic
ACTAAAATATTCACAACAAT+TGG 0.391875 3_2:+63116743 Msa0416320:CDS
CCATCATCATGAATCTTGTT+AGG 0.396564 3_2:-63114143 None:intergenic
TCCAGCTTGGGTGAAAGCTT+TGG 0.397072 3_2:+63117065 Msa0416320:CDS
CATTATGGTTCCTCTTGGTT+GGG 0.403721 3_2:+63115604 Msa0416320:CDS
TGTATGAGGGTTACTCTATC+AGG 0.406580 3_2:+63117796 Msa0416320:three_prime_UTR
ACAACTTCAGAACAGAATAT+TGG 0.410134 3_2:+63114017 Msa0416320:five_prime_UTR
ATGGTTCCTCTTGGTTGGGT+AGG 0.416120 3_2:+63115608 Msa0416320:CDS
GCGTACAGAAGGGAGGGCTC+TGG 0.421865 3_2:+63117475 Msa0416320:CDS
GCCAAAGCTTTCACCCAAGC+TGG 0.426229 3_2:-63117066 None:intergenic
GGTTCCTCTTGGTTGGGTAG+GGG 0.426770 3_2:+63115610 Msa0416320:CDS
TAATTTGATGAGCAGTTTCT+GGG 0.429639 3_2:-63114175 None:intergenic
CGGCATGCTTCCTGAGATAC+AGG 0.431193 3_2:+63116799 Msa0416320:CDS
GTGGGATGTGTCCTCACTAC+TGG 0.431656 3_2:+63115545 Msa0416320:CDS
GCGGCTCTTCTGCCATTCCT+TGG 0.436629 3_2:+63117354 Msa0416320:CDS
GTTCCTCTTGGTTGGGTAGG+GGG 0.437185 3_2:+63115611 Msa0416320:CDS
AAATGCTTTCATTGTTGGAT+AGG 0.440493 3_2:+63117666 Msa0416320:three_prime_UTR
ATCATTGGTTGTTACGTTGA+AGG 0.441028 3_2:+63113923 Msa0416320:five_prime_UTR
AATGCAACATATAGTGTATG+AGG 0.443507 3_2:+63117782 Msa0416320:three_prime_UTR
GTCTATCTGACCTGTATCTC+AGG 0.450002 3_2:-63116809 None:intergenic
CTGTGGTTTCAGTTTACCAT+TGG 0.450914 3_2:+63116955 Msa0416320:CDS
TCATTTAGAGTCGGAGTAAG+AGG 0.457265 3_2:+63117303 Msa0416320:CDS
GGGACCATTATGGTTCCTCT+TGG 0.458907 3_2:+63115599 Msa0416320:CDS
TAGCGTGCACGGTCCAGCTT+GGG 0.462680 3_2:+63117053 Msa0416320:CDS
GCTTATGTGCTTGGATACTC+AGG 0.465982 3_2:+63115578 Msa0416320:CDS
CCGTACTGCATTGCTATAGC+TGG 0.473359 3_2:+63116286 Msa0416320:CDS
CCACCTACGGTAACAACAAT+GGG 0.475476 3_2:+63114104 Msa0416320:exon
CCCATTGTTGTTACCGTAGG+TGG 0.481174 3_2:-63114104 None:intergenic
CGGAGTAAGAGGTGGTTACC+TGG 0.486173 3_2:+63117314 Msa0416320:CDS
TGTATACATTGTCATAGCAT+TGG 0.487225 3_2:+63116393 Msa0416320:CDS
ATTAGATACAGAGATCTTGC+TGG 0.488924 3_2:+63115722 Msa0416320:CDS
TCATTGGTTGTTACGTTGAA+GGG 0.493431 3_2:+63113924 Msa0416320:five_prime_UTR
GGTTACCTTTGCAGGATACT+GGG 0.495231 3_2:+63116996 Msa0416320:CDS
GTCAACAGTGCTTATGTGCT+TGG 0.495512 3_2:+63115569 Msa0416320:CDS
GGATATCGATATGATATCAT+TGG 0.496776 3_2:+63113908 Msa0416320:five_prime_UTR
GACAACTGGCTGCTTAATTG+TGG 0.498032 3_2:-63116914 None:intergenic
CGTACAGAAGGGAGGGCTCT+GGG 0.498171 3_2:+63117476 Msa0416320:CDS
ATAGCGTGCACGGTCCAGCT+TGG 0.509613 3_2:+63117052 Msa0416320:CDS
CAGCAACTGTTGCGGCAGTA+CGG 0.519965 3_2:+63117532 Msa0416320:CDS
TTACCCATTGTTGTTACCGT+AGG 0.520185 3_2:-63114107 None:intergenic
AGTATTTGGATACTAGATAT+GGG 0.521407 3_2:+63117247 Msa0416320:CDS
TTTGAGATCTCTCATACCGC+TGG 0.525161 3_2:+63113981 Msa0416320:five_prime_UTR
ACAACAATTGCCACCACCTA+CGG 0.529612 3_2:+63114091 Msa0416320:five_prime_UTR
TGGACTTGTACCAATGTACA+TGG 0.531370 3_2:+63116975 Msa0416320:CDS
CAAACTATCAAGCGTACAGA+AGG 0.532535 3_2:+63117464 Msa0416320:CDS
TATACCGTGTTTCGAGATGA+TGG 0.534072 3_2:+63116250 Msa0416320:CDS
AATGCTTATATATAGAAGAC+AGG 0.537165 3_2:+63113956 Msa0416320:five_prime_UTR
TGAAAGATGAGGAATGCAAA+TGG 0.537838 3_2:-63116329 None:intergenic
CCAACCAAGAGGAACCATAA+TGG 0.541448 3_2:-63115603 None:intergenic
GTAATGCAATGACTGATTGA+AGG 0.542448 3_2:-63117104 None:intergenic
CTAGTGTTCGCATACAATAC+CGG 0.545518 3_2:+63116779 Msa0416320:CDS
CTATGAATGTGTTAAAGGCC+AGG 0.545650 3_2:-63117332 None:intergenic
CTCTCGAAATCTCCAAGGAA+TGG 0.547393 3_2:-63117366 None:intergenic
GTTACTCTATCAGGTTCTGT+TGG 0.549480 3_2:+63117805 Msa0416320:three_prime_UTR
GGAGATTTCGAGAGTCTCAC+AGG 0.554644 3_2:+63117375 Msa0416320:CDS
TGCAGATTCATGGTTTCAAG+TGG 0.558255 3_2:+63115526 Msa0416320:intron
AAGAACTTGTCATTTAGAGT+CGG 0.561515 3_2:+63117294 Msa0416320:CDS
ACCACCTACGGTAACAACAA+TGG 0.561583 3_2:+63114103 Msa0416320:exon
GTATCCAAATACTCATACAT+CGG 0.565959 3_2:-63117237 None:intergenic
CCTAACAAGATTCATGATGA+TGG 0.566611 3_2:+63114143 Msa0416320:CDS
AAAAGGCATATTCTATCACA+TGG 0.568216 3_2:+63115855 Msa0416320:CDS
GATCAGTGGAGAAGCAATGA+AGG 0.571127 3_2:+63117269 Msa0416320:CDS
ACTTCAGAACAGAATATTGG+TGG 0.573977 3_2:+63114020 Msa0416320:five_prime_UTR
ATTGTTGTTACCGTAGGTGG+TGG 0.574248 3_2:-63114101 None:intergenic
GTCTATTGCAGCAACTGTTG+CGG 0.576459 3_2:+63117524 Msa0416320:CDS
TTGCAAGAATAAATGTAAGC+GGG 0.576732 3_2:-63117413 None:intergenic
ACAACAATGGGTAAAGGAAG+AGG 0.581226 3_2:+63114116 Msa0416320:exon
GGAACAGTGTAATCTCGAGC+AGG 0.584265 3_2:-63116707 None:intergenic
CAATGGTAAACTGAAACCAC+AGG 0.585074 3_2:-63116954 None:intergenic
ACGGTAACAACAATGGGTAA+AGG 0.586107 3_2:+63114110 Msa0416320:exon
CTGTATCTCAGGAAGCATGC+CGG 0.587899 3_2:-63116798 None:intergenic
GAGGCTAAAGAAAACAATGT+TGG 0.588227 3_2:-63117499 None:intergenic
TTGGTGCTGTCGATTAAAGA+TGG 0.589660 3_2:+63116412 Msa0416320:CDS
GATACTAGATATGGGATCAG+TGG 0.595270 3_2:+63117255 Msa0416320:CDS
GCAGATTCATGGTTTCAAGT+GGG 0.595461 3_2:+63115527 Msa0416320:intron
TGCAAACCATATGTACTACA+AGG 0.605665 3_2:+63117431 Msa0416320:CDS
TGCTATGACAATGTATACAA+AGG 0.606274 3_2:-63116389 None:intergenic
ACTGCTCATCAAATTAGCAC+CGG 0.606729 3_2:+63114182 Msa0416320:CDS
GATTACACTGTTCCAGAACA+CGG 0.606932 3_2:+63116716 Msa0416320:CDS
CACACCATCATCTCGAAACA+CGG 0.612096 3_2:-63116254 None:intergenic
CTATGCTCCATGAATATGGA+GGG 0.617895 3_2:+63115690 Msa0416320:CDS
TATTTGCTGAATAGCGTGCA+CGG 0.618514 3_2:+63117042 Msa0416320:CDS
TATCAAGCGTACAGAAGGGA+GGG 0.624875 3_2:+63117469 Msa0416320:CDS
CCAGCTATAGCAATGCAGTA+CGG 0.625491 3_2:-63116286 None:intergenic
GCTATGCTCCATGAATATGG+AGG 0.628110 3_2:+63115689 Msa0416320:CDS
ATTAGCATAGAGCGAAATCG+CGG 0.629033 3_2:-63115657 None:intergenic
CTATCAAGCGTACAGAAGGG+AGG 0.630934 3_2:+63117468 Msa0416320:CDS
CACTGTTGACTCCAGTAGTG+AGG 0.634084 3_2:-63115556 None:intergenic
GTACATTGGTACAAGTCCAA+TGG 0.635192 3_2:-63116971 None:intergenic
ACTCCAAGAGCTGAAAGATG+AGG 0.637059 3_2:-63116340 None:intergenic
TTTGCAAGAATAAATGTAAG+CGG 0.638473 3_2:-63117414 None:intergenic
TGAGACTCTCGAAATCTCCA+AGG 0.640360 3_2:-63117371 None:intergenic
CTTATGTGCTTGGATACTCA+GGG 0.644689 3_2:+63115579 Msa0416320:CDS
TTTAGAGTCGGAGTAAGAGG+TGG 0.647394 3_2:+63117306 Msa0416320:CDS
TGCAATGACTGATTGAAGGA+AGG 0.648266 3_2:-63117100 None:intergenic
ATGCAACATATAGTGTATGA+GGG 0.651172 3_2:+63117783 Msa0416320:three_prime_UTR
ATAAGCCCAGTATCCTGCAA+AGG 0.654594 3_2:-63117001 None:intergenic
GCAAAGGTAACCATGTACAT+TGG 0.656882 3_2:-63116985 None:intergenic
CAGTTGCTGCAATAGACATG+AGG 0.663766 3_2:-63117518 None:intergenic
AAACTATCAAGCGTACAGAA+GGG 0.678840 3_2:+63117465 Msa0416320:CDS
AAAGGCATATTCTATCACAT+GGG 0.685218 3_2:+63115856 Msa0416320:CDS
GGCCTTTAACACATTCATAG+CGG 0.702664 3_2:+63117335 Msa0416320:CDS
TGTTGATAAGAATCAACCAG+CGG 0.728252 3_2:-63113997 None:intergenic
AGCGGTATGAGAGATCTCAA+AGG 0.729107 3_2:-63113979 None:intergenic
AATGGTAAACTGAAACCACA+GGG 0.745661 3_2:-63116953 None:intergenic
AGAACATGATGAAATCCCTG+TGG 0.754118 3_2:+63116938 Msa0416320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATTTAATTTTGAGA+GGG + chr3_2:63114269-63114288 Msa0416320:intron 10.0%
!!! AATAAAAATTTAGAATATAC+AGG + chr3_2:63115247-63115266 Msa0416320:intron 10.0%
!!! TTAATTAACTAATTTTTTTC+TGG + chr3_2:63115453-63115472 Msa0416320:intron 10.0%
!!! TGTTTTAATTTAATTTTAAC+TGG + chr3_2:63115488-63115507 Msa0416320:intron 10.0%
!!! GTTTTAATTTAATTTTAACT+GGG + chr3_2:63115489-63115508 Msa0416320:intron 10.0%
!!! TTTTCATTTTATTTAATTGT+AGG + chr3_2:63115830-63115849 Msa0416320:intron 10.0%
!!! AATATACAATTTTAATTGAA+TGG - chr3_2:63115968-63115987 None:intergenic 10.0%
!!! TTCTATATATAAGCATTTTT+TGG - chr3_2:63113953-63113972 None:intergenic 15.0%
!! AAAAAGAAAAATTAAGGTTA+TGG - chr3_2:63114221-63114240 None:intergenic 15.0%
!!! GTTTTATATTTAATTTTGAG+AGG + chr3_2:63114268-63114287 Msa0416320:intron 15.0%
!! TATGTAAACAAAACAAATAT+AGG - chr3_2:63114517-63114536 None:intergenic 15.0%
!! GAAAAAAAAAAGTTTAATGA+TGG + chr3_2:63114733-63114752 Msa0416320:intron 15.0%
!!! TGTGTAAAATAATTTTTCAA+TGG + chr3_2:63114973-63114992 Msa0416320:intron 15.0%
!!! TTGTATAAAACTTTTCTTTT+TGG + chr3_2:63115097-63115116 Msa0416320:intron 15.0%
!! TTATTTAATTGTAGGTAAAA+AGG + chr3_2:63115838-63115857 Msa0416320:intron 15.0%
!!! AGTCCATAATATTTTTTAAT+CGG - chr3_2:63116083-63116102 None:intergenic 15.0%
!! AATATAGGTAAACTACAAAA+GGG - chr3_2:63114502-63114521 None:intergenic 20.0%
!! AAATATAGGTAAACTACAAA+AGG - chr3_2:63114503-63114522 None:intergenic 20.0%
!!! ATTCTAAATGTTTTGATAGA+TGG - chr3_2:63114780-63114799 None:intergenic 20.0%
!! ATCTATCAAAACATTTAGAA+TGG + chr3_2:63114779-63114798 Msa0416320:intron 20.0%
!!! AACTGAAGAAGTATATTAAA+GGG - chr3_2:63115435-63115454 None:intergenic 20.0%
!!! TAACTGAAGAAGTATATTAA+AGG - chr3_2:63115436-63115455 None:intergenic 20.0%
!!! TTAATTTAATTTTAACTGGG+TGG + chr3_2:63115492-63115511 Msa0416320:intron 20.0%
!!! AATCTTTTCATGATAAATAC+TGG + chr3_2:63115893-63115912 Msa0416320:CDS 20.0%
!! TTTGAAAGTAAGAGAAATTT+AGG + chr3_2:63115940-63115959 Msa0416320:intron 20.0%
!! GTTATTTAGTAAAGAAAGTT+TGG - chr3_2:63116037-63116056 None:intergenic 20.0%
!!! TTGAGCATTATTTTTTGTAA+AGG + chr3_2:63116106-63116125 Msa0416320:intron 20.0%
!!! ATTTTTTGTAAAGGACTAAA+AGG + chr3_2:63116115-63116134 Msa0416320:intron 20.0%
!!! TTTAGATAAGTGGATTATTA+TGG - chr3_2:63116523-63116542 None:intergenic 20.0%
!! ACTAAAATATTCACAACAAT+TGG + chr3_2:63116743-63116762 Msa0416320:CDS 20.0%
!! TGAAACTTAATATGAAGATA+TGG - chr3_2:63116847-63116866 None:intergenic 20.0%
!!! ACTTATTTTGTATTTTTACC+TGG + chr3_2:63117173-63117192 Msa0416320:intron 20.0%
!!! ATTTTAAATGCTTTCATTGT+TGG + chr3_2:63117661-63117680 Msa0416320:three_prime_UTR 20.0%
! AATGCTTATATATAGAAGAC+AGG + chr3_2:63113956-63113975 Msa0416320:five_prime_UTR 25.0%
! GAAGAAGTAGCTTAAATTTA+CGG + chr3_2:63114044-63114063 Msa0416320:five_prime_UTR 25.0%
! CGTACTATAATATTTCAACA+AGG - chr3_2:63114361-63114380 None:intergenic 25.0%
!! ACTGAAGAAGTATATTAAAG+GGG - chr3_2:63115434-63115453 None:intergenic 25.0%
! GGATATGTATATGGTAAATA+AGG + chr3_2:63115743-63115762 Msa0416320:intron 25.0%
!! AGATTTCTAATGTGTTTTGT+TGG - chr3_2:63115769-63115788 None:intergenic 25.0%
!!! AAATACTGGTTACATCATTT+TGG + chr3_2:63115907-63115926 Msa0416320:CDS 25.0%
!!! AAGTTTGGATTAGTTTTTGT+CGG - chr3_2:63116022-63116041 None:intergenic 25.0%
!!! CCATAATATTTTTTAATCGG+AGG - chr3_2:63116080-63116099 None:intergenic 25.0%
! CCTCCGATTAAAAAATATTA+TGG + chr3_2:63116077-63116096 Msa0416320:intron 25.0%
!! TATTTGTTAATGTAACTTGC+AGG + chr3_2:63116891-63116910 Msa0416320:intron 25.0%
! AGTATTTGGATACTAGATAT+GGG + chr3_2:63117247-63117266 Msa0416320:CDS 25.0%
! TTTGCAAGAATAAATGTAAG+CGG - chr3_2:63117417-63117436 None:intergenic 25.0%
GGATATCGATATGATATCAT+TGG + chr3_2:63113908-63113927 Msa0416320:five_prime_UTR 30.0%
ACAACTTCAGAACAGAATAT+TGG + chr3_2:63114017-63114036 Msa0416320:five_prime_UTR 30.0%
TAATTTGATGAGCAGTTTCT+GGG - chr3_2:63114178-63114197 None:intergenic 30.0%
TTCGAAAATTCCCATGTTAA+TGG + chr3_2:63114312-63114331 Msa0416320:intron 30.0%
TATAGTACGACATATTGAAG+AGG + chr3_2:63114372-63114391 Msa0416320:intron 30.0%
!! TTTGTTTTCCTTTCCAAACA+AGG + chr3_2:63114447-63114466 Msa0416320:intron 30.0%
! TTGTTTTCCTTTCCAAACAA+GGG + chr3_2:63114448-63114467 Msa0416320:intron 30.0%
!! TGTACGTGTCGATTATTAAA+AGG + chr3_2:63114644-63114663 Msa0416320:intron 30.0%
!! AATATTTGCTATTTGCAGAG+TGG - chr3_2:63114897-63114916 None:intergenic 30.0%
CACATATCACAGCTTATTAT+TGG - chr3_2:63115145-63115164 None:intergenic 30.0%
ATAATAAGCTGTGATATGTG+TGG + chr3_2:63115145-63115164 Msa0416320:intron 30.0%
TGGAAACAACAAGTTATTCA+AGG - chr3_2:63115202-63115221 None:intergenic 30.0%
TATTCACTCTTGAGAAGAAA+CGG + chr3_2:63115400-63115419 Msa0416320:intron 30.0%
! CTGAAGAAGTATATTAAAGG+GGG - chr3_2:63115433-63115452 None:intergenic 30.0%
!!! ATTTTAACTGGGTGGTAATT+TGG + chr3_2:63115500-63115519 Msa0416320:intron 30.0%
!!! AATTTGGTTTTGCAGATTCA+TGG + chr3_2:63115516-63115535 Msa0416320:intron 30.0%
! AAAAGGCATATTCTATCACA+TGG + chr3_2:63115855-63115874 Msa0416320:CDS 30.0%
! AAAGGCATATTCTATCACAT+GGG + chr3_2:63115856-63115875 Msa0416320:CDS 30.0%
!!! AGTTTGGATTAGTTTTTGTC+GGG - chr3_2:63116021-63116040 None:intergenic 30.0%
!!! GATCCTTTAAAATTTTCTCG+CGG - chr3_2:63116142-63116161 None:intergenic 30.0%
TGCTATGACAATGTATACAA+AGG - chr3_2:63116392-63116411 None:intergenic 30.0%
TGTATACATTGTCATAGCAT+TGG + chr3_2:63116393-63116412 Msa0416320:CDS 30.0%
! CAATTGGTTTAAAGAACTGA+TGG - chr3_2:63116499-63116518 None:intergenic 30.0%
!! AGTGGATTATTATGGACAAT+TGG - chr3_2:63116515-63116534 None:intergenic 30.0%
CTGAGTAAACTTTAGATAAG+TGG - chr3_2:63116533-63116552 None:intergenic 30.0%
AGTTTACTCAGTTATACACT+AGG + chr3_2:63116542-63116561 Msa0416320:intron 30.0%
GAAATAGAACACAGGTTATT+AGG - chr3_2:63117199-63117218 None:intergenic 30.0%
GTATCCAAATACTCATACAT+CGG - chr3_2:63117240-63117259 None:intergenic 30.0%
GAGTATTTGGATACTAGATA+TGG + chr3_2:63117246-63117265 Msa0416320:CDS 30.0%
! AAGAACTTGTCATTTAGAGT+CGG + chr3_2:63117294-63117313 Msa0416320:CDS 30.0%
TTGCAAGAATAAATGTAAGC+GGG - chr3_2:63117416-63117435 None:intergenic 30.0%
AAATGCTTTCATTGTTGGAT+AGG + chr3_2:63117666-63117685 Msa0416320:three_prime_UTR 30.0%
AATGCAACATATAGTGTATG+AGG + chr3_2:63117782-63117801 Msa0416320:three_prime_UTR 30.0%
ATGCAACATATAGTGTATGA+GGG + chr3_2:63117783-63117802 Msa0416320:three_prime_UTR 30.0%
! ATCATTGGTTGTTACGTTGA+AGG + chr3_2:63113923-63113942 Msa0416320:five_prime_UTR 35.0%
! TCATTGGTTGTTACGTTGAA+GGG + chr3_2:63113924-63113943 Msa0416320:five_prime_UTR 35.0%
! TGTTGATAAGAATCAACCAG+CGG - chr3_2:63114000-63114019 None:intergenic 35.0%
ACTTCAGAACAGAATATTGG+TGG + chr3_2:63114020-63114039 Msa0416320:five_prime_UTR 35.0%
CCATCATCATGAATCTTGTT+AGG - chr3_2:63114146-63114165 None:intergenic 35.0%
CCTAACAAGATTCATGATGA+TGG + chr3_2:63114143-63114162 Msa0416320:CDS 35.0%
CTAATTTGATGAGCAGTTTC+TGG - chr3_2:63114179-63114198 None:intergenic 35.0%
TTATGGTGTGAGATACAAAC+CGG - chr3_2:63114204-63114223 None:intergenic 35.0%
ATTCCCATGTTAATGGAACA+TGG + chr3_2:63114319-63114338 Msa0416320:intron 35.0%
ACTCCATGTTCCATTAACAT+GGG - chr3_2:63114325-63114344 None:intergenic 35.0%
! TAATTTGCCCTTGTTTGGAA+AGG - chr3_2:63114458-63114477 None:intergenic 35.0%
GCAGAATCAAAATTCAGTCA+TGG - chr3_2:63114556-63114575 None:intergenic 35.0%
!! CTTTTCTTTTTGGAGAGTGT+CGG + chr3_2:63115107-63115126 Msa0416320:intron 35.0%
GTGAATATGAATGTTACGCA+TGG - chr3_2:63115222-63115241 None:intergenic 35.0%
TTAGTGCCAGGAAATCAAAA+GGG - chr3_2:63115359-63115378 None:intergenic 35.0%
ATTAGTGCCAGGAAATCAAA+AGG - chr3_2:63115360-63115379 None:intergenic 35.0%
AGAAAACTGATATTAGTGCC+AGG - chr3_2:63115371-63115390 None:intergenic 35.0%
ATTGCTATGCTCCATGAATA+TGG + chr3_2:63115686-63115705 Msa0416320:CDS 35.0%
ATTAGATACAGAGATCTTGC+TGG + chr3_2:63115722-63115741 Msa0416320:CDS 35.0%
GATCTTGCTGGATATGTATA+TGG + chr3_2:63115734-63115753 Msa0416320:CDS 35.0%
!!! GTAGTGACTTTTTTTGACAC+CGG + chr3_2:63116199-63116218 Msa0416320:intron 35.0%
TGAAAGATGAGGAATGCAAA+TGG - chr3_2:63116332-63116351 None:intergenic 35.0%
TGGTTTAAAGAACTGATGGT+AGG - chr3_2:63116495-63116514 None:intergenic 35.0%
!!! ATTTTAGTTACACCGTGTTC+TGG - chr3_2:63116731-63116750 None:intergenic 35.0%
TTCATCATGTTCTTGACAAC+TGG - chr3_2:63116931-63116950 None:intergenic 35.0%
AATGGTAAACTGAAACCACA+GGG - chr3_2:63116956-63116975 None:intergenic 35.0%
TTGAAGGAAGGCTGTAATAT+TGG - chr3_2:63117091-63117110 None:intergenic 35.0%
GTAATGCAATGACTGATTGA+AGG - chr3_2:63117107-63117126 None:intergenic 35.0%
ATCTGTCAGAAATAGAACAC+AGG - chr3_2:63117207-63117226 None:intergenic 35.0%
AAGTCCGATGTATGAGTATT+TGG + chr3_2:63117233-63117252 Msa0416320:CDS 35.0%
TGCAAACCATATGTACTACA+AGG + chr3_2:63117431-63117450 Msa0416320:CDS 35.0%
TCTTTGCCTTGTAGTACATA+TGG - chr3_2:63117440-63117459 None:intergenic 35.0%
AAACTATCAAGCGTACAGAA+GGG + chr3_2:63117465-63117484 Msa0416320:CDS 35.0%
GAGGCTAAAGAAAACAATGT+TGG - chr3_2:63117502-63117521 None:intergenic 35.0%
! TTACCCATTGTTGTTACCGT+AGG - chr3_2:63114110-63114129 None:intergenic 40.0%
ACGGTAACAACAATGGGTAA+AGG + chr3_2:63114110-63114129 Msa0416320:exon 40.0%
ACAACAATGGGTAAAGGAAG+AGG + chr3_2:63114116-63114135 Msa0416320:exon 40.0%
ACTGCTCATCAAATTAGCAC+CGG + chr3_2:63114182-63114201 Msa0416320:CDS 40.0%
GACTCCATGTTCCATTAACA+TGG - chr3_2:63114326-63114345 None:intergenic 40.0%
TTAATGGAACATGGAGTCAG+AGG + chr3_2:63114328-63114347 Msa0416320:intron 40.0%
! GAGACTAATTTGCCCTTGTT+TGG - chr3_2:63114463-63114482 None:intergenic 40.0%
!! ATTTGCTATTTGCAGAGTGG+TGG - chr3_2:63114894-63114913 None:intergenic 40.0%
TAGTGCCAGGAAATCAAAAG+GGG - chr3_2:63115358-63115377 None:intergenic 40.0%
TGCAGATTCATGGTTTCAAG+TGG + chr3_2:63115526-63115545 Msa0416320:intron 40.0%
! GCAGATTCATGGTTTCAAGT+GGG + chr3_2:63115527-63115546 Msa0416320:intron 40.0%
CTTATGTGCTTGGATACTCA+GGG + chr3_2:63115579-63115598 Msa0416320:CDS 40.0%
CATTATGGTTCCTCTTGGTT+GGG + chr3_2:63115604-63115623 Msa0416320:CDS 40.0%
ATTAGCATAGAGCGAAATCG+CGG - chr3_2:63115660-63115679 None:intergenic 40.0%
CTATGCTCCATGAATATGGA+GGG + chr3_2:63115690-63115709 Msa0416320:CDS 40.0%
!! ACTGGTTACATCATTTTGGC+TGG + chr3_2:63115911-63115930 Msa0416320:CDS 40.0%
TTTGTCGGGACTAAATTGAG+TGG - chr3_2:63116007-63116026 None:intergenic 40.0%
! GGACCGCGAGAAAATTTTAA+AGG + chr3_2:63116136-63116155 Msa0416320:intron 40.0%
TATACCGTGTTTCGAGATGA+TGG + chr3_2:63116250-63116269 Msa0416320:CDS 40.0%
ATTCCTCATCTTTCAGCTCT+TGG + chr3_2:63116337-63116356 Msa0416320:CDS 40.0%
ATCTTTCAGCTCTTGGAGTT+TGG + chr3_2:63116344-63116363 Msa0416320:CDS 40.0%
!! TTGGTGCTGTCGATTAAAGA+TGG + chr3_2:63116412-63116431 Msa0416320:CDS 40.0%
GATTACACTGTTCCAGAACA+CGG + chr3_2:63116716-63116735 Msa0416320:CDS 40.0%
CTAGTGTTCGCATACAATAC+CGG + chr3_2:63116779-63116798 Msa0416320:CDS 40.0%
AGAACATGATGAAATCCCTG+TGG + chr3_2:63116938-63116957 Msa0416320:CDS 40.0%
CAATGGTAAACTGAAACCAC+AGG - chr3_2:63116957-63116976 None:intergenic 40.0%
CTGTGGTTTCAGTTTACCAT+TGG + chr3_2:63116955-63116974 Msa0416320:CDS 40.0%
GTACATTGGTACAAGTCCAA+TGG - chr3_2:63116974-63116993 None:intergenic 40.0%
TGGACTTGTACCAATGTACA+TGG + chr3_2:63116975-63116994 Msa0416320:CDS 40.0%
GCAAAGGTAACCATGTACAT+TGG - chr3_2:63116988-63117007 None:intergenic 40.0%
ATGTACATGGTTACCTTTGC+AGG + chr3_2:63116988-63117007 Msa0416320:CDS 40.0%
! TATTTGCTGAATAGCGTGCA+CGG + chr3_2:63117042-63117061 Msa0416320:CDS 40.0%
TGCAATGACTGATTGAAGGA+AGG - chr3_2:63117103-63117122 None:intergenic 40.0%
GATACTAGATATGGGATCAG+TGG + chr3_2:63117255-63117274 Msa0416320:CDS 40.0%
! TCATTTAGAGTCGGAGTAAG+AGG + chr3_2:63117303-63117322 Msa0416320:CDS 40.0%
CTATGAATGTGTTAAAGGCC+AGG - chr3_2:63117335-63117354 None:intergenic 40.0%
GGCCTTTAACACATTCATAG+CGG + chr3_2:63117335-63117354 Msa0416320:CDS 40.0%
AGCCGCTATGAATGTGTTAA+AGG - chr3_2:63117340-63117359 None:intergenic 40.0%
CAAACTATCAAGCGTACAGA+AGG + chr3_2:63117464-63117483 Msa0416320:CDS 40.0%
TGTATGAGGGTTACTCTATC+AGG + chr3_2:63117796-63117815 Msa0416320:three_prime_UTR 40.0%
GTTACTCTATCAGGTTCTGT+TGG + chr3_2:63117805-63117824 Msa0416320:three_prime_UTR 40.0%
AGCGGTATGAGAGATCTCAA+AGG - chr3_2:63113982-63114001 None:intergenic 45.0%
! TTTGAGATCTCTCATACCGC+TGG + chr3_2:63113981-63114000 Msa0416320:five_prime_UTR 45.0%
ACAACAATTGCCACCACCTA+CGG + chr3_2:63114091-63114110 Msa0416320:five_prime_UTR 45.0%
! ATTGTTGTTACCGTAGGTGG+TGG - chr3_2:63114104-63114123 None:intergenic 45.0%
ACCACCTACGGTAACAACAA+TGG + chr3_2:63114103-63114122 Msa0416320:exon 45.0%
CCACCTACGGTAACAACAAT+GGG + chr3_2:63114104-63114123 Msa0416320:exon 45.0%
AGTGCCAGGAAATCAAAAGG+GGG - chr3_2:63115357-63115376 None:intergenic 45.0%
GTCAACAGTGCTTATGTGCT+TGG + chr3_2:63115569-63115588 Msa0416320:CDS 45.0%
GCTTATGTGCTTGGATACTC+AGG + chr3_2:63115578-63115597 Msa0416320:CDS 45.0%
TGGATACTCAGGGACCATTA+TGG + chr3_2:63115589-63115608 Msa0416320:CDS 45.0%
CCAACCAAGAGGAACCATAA+TGG - chr3_2:63115606-63115625 None:intergenic 45.0%
CCATTATGGTTCCTCTTGGT+TGG + chr3_2:63115603-63115622 Msa0416320:CDS 45.0%
GCTATGCTCCATGAATATGG+AGG + chr3_2:63115689-63115708 Msa0416320:CDS 45.0%
GTCTTGTCCCTCCATATTCA+TGG - chr3_2:63115700-63115719 None:intergenic 45.0%
CACCACAGTGAACGTAAAAC+CGG - chr3_2:63116221-63116240 None:intergenic 45.0%
! TTTTACGTTCACTGTGGTGC+AGG + chr3_2:63116222-63116241 Msa0416320:intron 45.0%
CACACCATCATCTCGAAACA+CGG - chr3_2:63116257-63116276 None:intergenic 45.0%
CCAGCTATAGCAATGCAGTA+CGG - chr3_2:63116289-63116308 None:intergenic 45.0%
ACTCCAAGAGCTGAAAGATG+AGG - chr3_2:63116343-63116362 None:intergenic 45.0%
TTCAGCTCTTGGAGTTTGGT+TGG + chr3_2:63116348-63116367 Msa0416320:CDS 45.0%
TCAGCTCTTGGAGTTTGGTT+GGG + chr3_2:63116349-63116368 Msa0416320:CDS 45.0%
CTAACCAACAATGCATTGCC+AGG + chr3_2:63116674-63116693 Msa0416320:intron 45.0%
CATTCCTGGCAATGCATTGT+TGG - chr3_2:63116681-63116700 None:intergenic 45.0%
GTCTATCTGACCTGTATCTC+AGG - chr3_2:63116812-63116831 None:intergenic 45.0%
GACAACTGGCTGCTTAATTG+TGG - chr3_2:63116917-63116936 None:intergenic 45.0%
TGGTTACCTTTGCAGGATAC+TGG + chr3_2:63116995-63117014 Msa0416320:CDS 45.0%
GGTTACCTTTGCAGGATACT+GGG + chr3_2:63116996-63117015 Msa0416320:CDS 45.0%
ATAAGCCCAGTATCCTGCAA+AGG - chr3_2:63117004-63117023 None:intergenic 45.0%
TTTGCAGGATACTGGGCTTA+TGG + chr3_2:63117003-63117022 Msa0416320:CDS 45.0%
GTGCACGCTATTCAGCAAAT+AGG - chr3_2:63117043-63117062 None:intergenic 45.0%
AGAACACAGGTTATTAGGCC+AGG - chr3_2:63117194-63117213 None:intergenic 45.0%
GATCAGTGGAGAAGCAATGA+AGG + chr3_2:63117269-63117288 Msa0416320:CDS 45.0%
! TTTAGAGTCGGAGTAAGAGG+TGG + chr3_2:63117306-63117325 Msa0416320:CDS 45.0%
CTCTCGAAATCTCCAAGGAA+TGG - chr3_2:63117369-63117388 None:intergenic 45.0%
TGAGACTCTCGAAATCTCCA+AGG - chr3_2:63117374-63117393 None:intergenic 45.0%
TATCAAGCGTACAGAAGGGA+GGG + chr3_2:63117469-63117488 Msa0416320:CDS 45.0%
CAGTTGCTGCAATAGACATG+AGG - chr3_2:63117521-63117540 None:intergenic 45.0%
GTCTATTGCAGCAACTGTTG+CGG + chr3_2:63117524-63117543 Msa0416320:CDS 45.0%
!! TTATTTAAAAAGAAAAATTA+AGG - chr3_2:63114227-63114246 None:intergenic 5.0%
!!! AACAAAATAATATTTTTTTT+TGG - chr3_2:63114625-63114644 None:intergenic 5.0%
! CCCATTGTTGTTACCGTAGG+TGG - chr3_2:63114107-63114126 None:intergenic 50.0%
GGAAGAACATGACGCACATG+CGG + chr3_2:63114393-63114412 Msa0416320:intron 50.0%
!!! ACACCCCCCTTTTGATTTCC+TGG + chr3_2:63115350-63115369 Msa0416320:intron 50.0%
GTGCCAGGAAATCAAAAGGG+GGG - chr3_2:63115356-63115375 None:intergenic 50.0%
!! CACTGTTGACTCCAGTAGTG+AGG - chr3_2:63115559-63115578 None:intergenic 50.0%
GGGACCATTATGGTTCCTCT+TGG + chr3_2:63115599-63115618 Msa0416320:CDS 50.0%
ATGGTTCCTCTTGGTTGGGT+AGG + chr3_2:63115608-63115627 Msa0416320:CDS 50.0%
TGGTTCCTCTTGGTTGGGTA+GGG + chr3_2:63115609-63115628 Msa0416320:CDS 50.0%
!!! CACCGGTTTTACGTTCACTG+TGG + chr3_2:63116216-63116235 Msa0416320:intron 50.0%
CCGTACTGCATTGCTATAGC+TGG + chr3_2:63116286-63116305 Msa0416320:CDS 50.0%
CGAGCAGGTGAATTCATTCC+TGG - chr3_2:63116695-63116714 None:intergenic 50.0%
GGAACAGTGTAATCTCGAGC+AGG - chr3_2:63116710-63116729 None:intergenic 50.0%
! CTGTATCTCAGGAAGCATGC+CGG - chr3_2:63116801-63116820 None:intergenic 50.0%
TCCAGCTTGGGTGAAAGCTT+TGG + chr3_2:63117065-63117084 Msa0416320:CDS 50.0%
GGAGATTTCGAGAGTCTCAC+AGG + chr3_2:63117375-63117394 Msa0416320:CDS 50.0%
CTATCAAGCGTACAGAAGGG+AGG + chr3_2:63117468-63117487 Msa0416320:CDS 50.0%
GTGGGATGTGTCCTCACTAC+TGG + chr3_2:63115545-63115564 Msa0416320:CDS 55.0%
GGTTCCTCTTGGTTGGGTAG+GGG + chr3_2:63115610-63115629 Msa0416320:CDS 55.0%
GTTCCTCTTGGTTGGGTAGG+GGG + chr3_2:63115611-63115630 Msa0416320:CDS 55.0%
CGGCATGCTTCCTGAGATAC+AGG + chr3_2:63116799-63116818 Msa0416320:CDS 55.0%
GCCAAAGCTTTCACCCAAGC+TGG - chr3_2:63117069-63117088 None:intergenic 55.0%
CGGAGTAAGAGGTGGTTACC+TGG + chr3_2:63117314-63117333 Msa0416320:CDS 55.0%
CAGCAACTGTTGCGGCAGTA+CGG + chr3_2:63117532-63117551 Msa0416320:CDS 55.0%
ACACCCCCTACCCAACCAAG+AGG - chr3_2:63115617-63115636 None:intergenic 60.0%
! GGTTGGGTAGGGGGTGTAGT+TGG + chr3_2:63115620-63115639 Msa0416320:CDS 60.0%
ATAGCGTGCACGGTCCAGCT+TGG + chr3_2:63117052-63117071 Msa0416320:CDS 60.0%
TAGCGTGCACGGTCCAGCTT+GGG + chr3_2:63117053-63117072 Msa0416320:CDS 60.0%
GCGGCTCTTCTGCCATTCCT+TGG + chr3_2:63117354-63117373 Msa0416320:CDS 60.0%
CGTACAGAAGGGAGGGCTCT+GGG + chr3_2:63117476-63117495 Msa0416320:CDS 60.0%
GCGTACAGAAGGGAGGGCTC+TGG + chr3_2:63117475-63117494 Msa0416320:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 63113889 63117866 63113889 ID=Msa0416320;Name=Msa0416320
chr3_2 mRNA 63113889 63117866 63113889 ID=Msa0416320-mRNA-1;Parent=Msa0416320;Name=Msa0416320-mRNA-1;_AED=0.06;_eAED=0.06;_QI=233|1|1|1|1|1|7|264|436
chr3_2 exon 63113889 63114203 63113889 ID=Msa0416320-mRNA-1:exon:13670;Parent=Msa0416320-mRNA-1
chr3_2 exon 63115531 63115755 63115531 ID=Msa0416320-mRNA-1:exon:13671;Parent=Msa0416320-mRNA-1
chr3_2 exon 63115852 63115946 63115852 ID=Msa0416320-mRNA-1:exon:13672;Parent=Msa0416320-mRNA-1
chr3_2 exon 63116244 63116433 63116244 ID=Msa0416320-mRNA-1:exon:13673;Parent=Msa0416320-mRNA-1
chr3_2 exon 63116696 63116820 63116696 ID=Msa0416320-mRNA-1:exon:13674;Parent=Msa0416320-mRNA-1
chr3_2 exon 63116913 63117128 63116913 ID=Msa0416320-mRNA-1:exon:13675;Parent=Msa0416320-mRNA-1
chr3_2 exon 63117225 63117866 63117225 ID=Msa0416320-mRNA-1:exon:13676;Parent=Msa0416320-mRNA-1
chr3_2 five_prime_UTR 63113889 63114121 63113889 ID=Msa0416320-mRNA-1:five_prime_utr;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63114122 63114203 63114122 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63115531 63115755 63115531 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63115852 63115946 63115852 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63116244 63116433 63116244 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63116696 63116820 63116696 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63116913 63117128 63116913 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 CDS 63117225 63117602 63117225 ID=Msa0416320-mRNA-1:cds;Parent=Msa0416320-mRNA-1
chr3_2 three_prime_UTR 63117603 63117866 63117603 ID=Msa0416320-mRNA-1:three_prime_utr;Parent=Msa0416320-mRNA-1
Gene Sequence

>Msa0416320

ATGGGTAAAGGAAGAGGTGATCCTAACAAGATTCATGATGATGGTGTTGAAATCCCAGAAACTGCTCATCAAATTAGCACCGATTCATGGTTTCAAGTGGGATGTGTCCTCACTACTGGAGTCAACAGTGCTTATGTGCTTGGATACTCAGGGACCATTATGGTTCCTCTTGGTTGGGTAGGGGGTGTAGTTGGTCTTGTTCTTGCTGCCGCGATTTCGCTCTATGCTAATGCTCTTATTGCTATGCTCCATGAATATGGAGGGACAAGACACATTAGATACAGAGATCTTGCTGGATATGTATATGGTAAAAAGGCATATTCTATCACATGGGCTCTGCAGTATATCAATCTTTTCATGATAAATACTGGTTACATCATTTTGGCTGGTTCAGCTTTGAAAGCTGCTTATACCGTGTTTCGAGATGATGGTGTGCTGAAGCTTCCGTACTGCATTGCTATAGCTGGAATTGTGTGTGCAATGTTTGCCATTTGCATTCCTCATCTTTCAGCTCTTGGAGTTTGGTTGGGAGTTTCAACAGTCTTCACCTTTGTATACATTGTCATAGCATTGGTGCTGTCGATTAAAGATGGAATGAATTCACCTGCTCGAGATTACACTGTTCCAGAACACGGTGTAACTAAAATATTCACAACAATTGGTGCGTCTGCTAGTCTAGTGTTCGCATACAATACCGGCATGCTTCCTGAGATACAGGCCACAATTAAGCAGCCAGTTGTCAAGAACATGATGAAATCCCTGTGGTTTCAGTTTACCATTGGACTTGTACCAATGTACATGGTTACCTTTGCAGGATACTGGGCTTATGGAAATACGACAGAAACCTATTTGCTGAATAGCGTGCACGGTCCAGCTTGGGTGAAAGCTTTGGCCAATATTACAGCCTTCCTTCAATCAGTCATTGCATTACATATATTTGCAAGTCCGATGTATGAGTATTTGGATACTAGATATGGGATCAGTGGAGAAGCAATGAAGGTTAAGAACTTGTCATTTAGAGTCGGAGTAAGAGGTGGTTACCTGGCCTTTAACACATTCATAGCGGCTCTTCTGCCATTCCTTGGAGATTTCGAGAGTCTCACAGGAGCGATCAGCACGTTCCCGCTTACATTTATTCTTGCAAACCATATGTACTACAAGGCAAAGAAGAACAAACTATCAAGCGTACAGAAGGGAGGGCTCTGGGCCAACATTGTTTTCTTTAGCCTCATGTCTATTGCAGCAACTGTTGCGGCAGTACGGCTCATTTCTGTAGACTCAAAAACATACAGTCTATTTGCAGATATTTGA

Protein sequence

>Msa0416320

MGKGRGDPNKIHDDGVEIPETAHQISTDSWFQVGCVLTTGVNSAYVLGYSGTIMVPLGWVGGVVGLVLAAAISLYANALIAMLHEYGGTRHIRYRDLAGYVYGKKAYSITWALQYINLFMINTGYIILAGSALKAAYTVFRDDGVLKLPYCIAIAGIVCAMFAICIPHLSALGVWLGVSTVFTFVYIVIALVLSIKDGMNSPARDYTVPEHGVTKIFTTIGASASLVFAYNTGMLPEIQATIKQPVVKNMMKSLWFQFTIGLVPMYMVTFAGYWAYGNTTETYLLNSVHGPAWVKALANITAFLQSVIALHIFASPMYEYLDTRYGISGEAMKVKNLSFRVGVRGGYLAFNTFIAALLPFLGDFESLTGAISTFPLTFILANHMYYKAKKNKLSSVQKGGLWANIVFFSLMSIAATVAAVRLISVDSKTYSLFADI*