Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160580 | XP_003624991.1 | 94.913 | 865 | 30 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160580 | sp|P32138|SQASE_ECOLI | 36.655 | 592 | 333 | 9 | 277 | 867 | 115 | 665 | 1.89e-125 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160580 | G7KQR9 | 94.913 | 865 | 30 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1704 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1160580 | -0.801483 | 8.813796e-49 | -8.615850e-47 |
| Msa0370310 | Msa1160580 | 0.825800 | 3.847846e-54 | -8.615850e-47 |
| Msa0370870 | Msa1160580 | 0.804237 | 2.379253e-49 | -8.615850e-47 |
| Msa0388710 | Msa1160580 | 0.970351 | 1.744539e-131 | -8.615850e-47 |
| Msa0416320 | Msa1160580 | 0.814798 | 1.282403e-51 | -8.615850e-47 |
| Msa0426810 | Msa1160580 | 0.803059 | 4.176356e-49 | -8.615850e-47 |
| Msa0982590 | Msa1160580 | 0.824053 | 9.940785e-54 | -8.615850e-47 |
| Msa0266210 | Msa1160580 | 0.811100 | 8.290596e-51 | -8.615850e-47 |
| Msa0287670 | Msa1160580 | 0.807897 | 4.038327e-50 | -8.615850e-47 |
| Msa0302650 | Msa1160580 | 0.803979 | 2.691212e-49 | -8.615850e-47 |
| Msa0362060 | Msa1160580 | 0.833923 | 4.035117e-56 | -8.615850e-47 |
| Msa0363100 | Msa1160580 | 0.805645 | 1.208139e-49 | -8.615850e-47 |
| Msa1122170 | Msa1160580 | 0.873582 | 1.315364e-67 | -8.615850e-47 |
| Msa1160580 | Msa1182640 | 0.824676 | 7.092598e-54 | -8.615850e-47 |
| Msa1160580 | Msa1229850 | 0.805587 | 1.242295e-49 | -8.615850e-47 |
| Msa1160580 | Msa1236070 | -0.810878 | 9.258459e-51 | -8.615850e-47 |
| Msa1160580 | Msa1272520 | 0.818572 | 1.827369e-52 | -8.615850e-47 |
| Msa1160580 | Msa1310660 | 0.835776 | 1.378352e-56 | -8.615850e-47 |
| Msa1160580 | Msa1350690 | 0.808119 | 3.622552e-50 | -8.615850e-47 |
| Msa1160580 | Msa1383480 | 0.814347 | 1.613693e-51 | -8.615850e-47 |
| Msa1160580 | Msa1419860 | 0.867162 | 1.676376e-65 | -8.615850e-47 |
| Msa0508540 | Msa1160580 | 0.800566 | 1.357006e-48 | -8.615850e-47 |
| Msa0510040 | Msa1160580 | 0.805632 | 1.215515e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160580 | MtrunA17_Chr7g0256191 | 94.913 | 865 | 30 | 1 | 1 | 865 | 1 | 851 | 0.0 | 1704 |
| Msa1160580 | MtrunA17_Chr3g0130691 | 24.485 | 388 | 243 | 12 | 478 | 844 | 387 | 745 | 2.02e-18 | 90.9 |
| Msa1160580 | MtrunA17_Chr2g0293111 | 28.309 | 272 | 155 | 12 | 592 | 856 | 506 | 744 | 1.37e-16 | 84.7 |
| Msa1160580 | MtrunA17_Chr2g0293101 | 27.574 | 272 | 157 | 12 | 592 | 856 | 506 | 744 | 1.70e-14 | 78.2 |
| Msa1160580 | MtrunA17_Chr5g0409111 | 22.628 | 411 | 247 | 14 | 485 | 873 | 314 | 675 | 3.36e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160580 | AT1G68560.1 | 30.603 | 232 | 125 | 9 | 661 | 883 | 560 | 764 | 1.59e-18 | 91.7 |
| Msa1160580 | AT5G63840.2 | 24.292 | 424 | 258 | 18 | 478 | 874 | 423 | 810 | 3.73e-18 | 90.5 |
| Msa1160580 | AT5G63840.1 | 24.292 | 424 | 258 | 18 | 478 | 874 | 396 | 783 | 4.53e-18 | 90.1 |
Find 201 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATCTCTCTGTTGATTT+TGG | 0.067059 | 7_4:+50570518 | None:intergenic |
| TTACTTAGCAGTGGAATTTC+TGG | 0.181038 | 7_4:-50570321 | Msa1160580:CDS |
| CCTACATCGAAGGCAGTATT+TGG | 0.182366 | 7_4:+50571325 | None:intergenic |
| ATTAGGATTATCAATGAATT+TGG | 0.182685 | 7_4:-50573445 | Msa1160580:CDS |
| GTAGCAGTTGGCTGCATATT+TGG | 0.192060 | 7_4:-50569454 | Msa1160580:CDS |
| TCCAATGTCACTGTGATTAA+AGG | 0.201406 | 7_4:+50570293 | None:intergenic |
| CTTGAGTTATCAACAATTCT+TGG | 0.231983 | 7_4:-50569555 | Msa1160580:CDS |
| AGAGGATGGATGGCTGATTT+TGG | 0.243979 | 7_4:-50571226 | Msa1160580:CDS |
| TTATCCTGCTGTATTTATTA+AGG | 0.245649 | 7_4:-50569375 | Msa1160580:intron |
| CAAACCCTATTGAACTCTTT+TGG | 0.248131 | 7_4:+50572989 | None:intergenic |
| GCTCACAACTTTGGTGGAAT+TGG | 0.248740 | 7_4:-50571750 | Msa1160580:CDS |
| ACGTTCCTGTCTCAGGATTT+TGG | 0.253778 | 7_4:-50571938 | Msa1160580:CDS |
| CTGCTAACTTGGTTAGTTAC+AGG | 0.271881 | 7_4:-50572826 | Msa1160580:intron |
| CAATGAATTTGGTGATCATT+TGG | 0.279266 | 7_4:-50573434 | Msa1160580:CDS |
| CTTCCAGAGTGGATAATATC+TGG | 0.284214 | 7_4:-50572029 | Msa1160580:CDS |
| CAATAATGGGAATGCATATA+TGG | 0.288175 | 7_4:-50571350 | Msa1160580:CDS |
| TTATGAACATGTTCATCATT+AGG | 0.289122 | 7_4:+50569578 | None:intergenic |
| GGAATATGAAGTTGAAGATT+TGG | 0.289491 | 7_4:-50573413 | Msa1160580:CDS |
| TTGTAAATTCCAGAAGCTTC+TGG | 0.290819 | 7_4:+50573139 | None:intergenic |
| CCGATGCTGTACGCCGTGTT+TGG | 0.296022 | 7_4:-50571980 | Msa1160580:CDS |
| GAATATAGAACCGCGTCAAC+GGG | 0.305740 | 7_4:+50571193 | None:intergenic |
| ATCAAACCATTGATGATATT+AGG | 0.306569 | 7_4:-50573462 | Msa1160580:CDS |
| CTCAGAAAACTAGACCAATT+TGG | 0.308722 | 7_4:-50573597 | Msa1160580:CDS |
| GTTGACGCGGTTCTATATTC+AGG | 0.313245 | 7_4:-50571190 | Msa1160580:intron |
| CTTCTTCTATATTTAACTAT+AGG | 0.313844 | 7_4:+50570249 | None:intergenic |
| CAAAACCAAAAGAGTTCAAT+AGG | 0.317943 | 7_4:-50572994 | Msa1160580:CDS |
| TATGAACATGTTCATCATTA+GGG | 0.321975 | 7_4:+50569579 | None:intergenic |
| ATTTGTTTATGCAAGGTATT+GGG | 0.331560 | 7_4:-50573251 | Msa1160580:CDS |
| CATTTGTTTATGCAAGGTAT+TGG | 0.334799 | 7_4:-50573252 | Msa1160580:CDS |
| TTTCTGTGAAATGTTCAATT+AGG | 0.337554 | 7_4:+50572072 | None:intergenic |
| AATAGAGAGCCTTGGACATT+AGG | 0.338490 | 7_4:+50573730 | None:intergenic |
| CCATGATTCACTTCCTTGTT+CGG | 0.340613 | 7_4:+50569415 | None:intergenic |
| ATAACAGATATCCTGAACTA+TGG | 0.342076 | 7_4:-50570542 | Msa1160580:CDS |
| TTCTTTCCTTTGTCAAGAAC+AGG | 0.344396 | 7_4:+50569509 | None:intergenic |
| CTCACAACTTTGGTGGAATT+GGG | 0.356672 | 7_4:-50571749 | Msa1160580:CDS |
| CCTTGTTCTTGAACTAAGAT+AGG | 0.364449 | 7_4:+50572881 | None:intergenic |
| AGTGGATGAACAAAGATATT+GGG | 0.364811 | 7_4:-50571725 | Msa1160580:CDS |
| CAAAAGAGTTCAATAGGGTT+TGG | 0.366276 | 7_4:-50572988 | Msa1160580:CDS |
| GGCAAAACAGTTGGACATAT+TGG | 0.371658 | 7_4:-50571380 | Msa1160580:CDS |
| AAGTGGATGAACAAAGATAT+TGG | 0.375947 | 7_4:-50571726 | Msa1160580:CDS |
| CAAACAGATTCTACTTGAAA+TGG | 0.378043 | 7_4:-50571263 | Msa1160580:CDS |
| CTTTCTTGGTCCACAATCAA+TGG | 0.379909 | 7_4:-50573646 | Msa1160580:CDS |
| TTAGTTCAAGAACAAGGTAT+TGG | 0.380621 | 7_4:-50572875 | Msa1160580:CDS |
| CACTGGAGCTTGCAGATATA+CGG | 0.381170 | 7_4:-50572140 | Msa1160580:intron |
| AAGCATTACCGGAGCTAGAC+AGG | 0.385122 | 7_4:+50571639 | None:intergenic |
| GGAAGACAAAGAAGATGGTT+TGG | 0.385569 | 7_4:-50570460 | Msa1160580:CDS |
| TATTGGTGAAAGACAATAAT+GGG | 0.385914 | 7_4:-50571363 | Msa1160580:CDS |
| CAAAGTGTGACAGAGTTTGA+TGG | 0.389027 | 7_4:+50569810 | None:intergenic |
| AATATACAGTTTGAATCAAA+AGG | 0.389107 | 7_4:-50573277 | Msa1160580:CDS |
| TTTGATGGTTTGAGTAAAAC+TGG | 0.389311 | 7_4:+50569825 | None:intergenic |
| GTGGTGTCTCCAGAAGCTTC+TGG | 0.392388 | 7_4:-50573148 | Msa1160580:CDS |
| TGGTATAATCATATCCTTCC+AGG | 0.400938 | 7_4:+50572537 | None:intergenic |
| TATCACTTTAGCTGCTAACT+TGG | 0.404655 | 7_4:-50572837 | Msa1160580:CDS |
| GGGGATGGGTCTAGCGGAAG+GGG | 0.418548 | 7_4:-50569255 | Msa1160580:CDS |
| ATATGAATTTCAAGGGGAAA+AGG | 0.424746 | 7_4:-50572907 | Msa1160580:CDS |
| ATCTTGTGAAGATAAAGCTT+TGG | 0.425183 | 7_4:+50573699 | None:intergenic |
| TATTGAAACTGTGCAGGATT+GGG | 0.428371 | 7_4:-50571797 | Msa1160580:CDS |
| CCTGAGATTGTAGACCAAAT+TGG | 0.431074 | 7_4:+50573583 | None:intergenic |
| ACTTATGACGTTCCTGTCTC+AGG | 0.433122 | 7_4:-50571945 | Msa1160580:CDS |
| CCATGATTGGCTCACAACTT+TGG | 0.436022 | 7_4:-50571759 | Msa1160580:CDS |
| CGATGCTGTACGCCGTGTTT+GGG | 0.438290 | 7_4:-50571979 | Msa1160580:CDS |
| AATACAGCAGGATAACCTAT+TGG | 0.441828 | 7_4:+50569383 | None:intergenic |
| AAAACCAAAAGAGTTCAATA+GGG | 0.442082 | 7_4:-50572993 | Msa1160580:CDS |
| TTGACAGGGCAGGAGGTGAT+TGG | 0.450945 | 7_4:-50572616 | Msa1160580:intron |
| ATATTGGTGAAAGACAATAA+TGG | 0.453880 | 7_4:-50571364 | Msa1160580:CDS |
| TTATTGAAACTGTGCAGGAT+TGG | 0.453994 | 7_4:-50571798 | Msa1160580:CDS |
| GATAATCCTAATATCATCAA+TGG | 0.454007 | 7_4:+50573456 | None:intergenic |
| CCAATTTGGTCTACAATCTC+AGG | 0.455407 | 7_4:-50573583 | Msa1160580:CDS |
| CATGTTCATCATTAGGGTAA+TGG | 0.458098 | 7_4:+50569585 | None:intergenic |
| ACAGAGAGATTGTGGAAGAA+TGG | 0.458297 | 7_4:-50570509 | Msa1160580:CDS |
| CAATACCTTGCATAAACAAA+TGG | 0.459933 | 7_4:+50573253 | None:intergenic |
| AAGGATGAATGCCAACCAAC+GGG | 0.460345 | 7_4:-50569276 | Msa1160580:CDS |
| GTCTTCCTTCAACTTGTCCA+AGG | 0.464772 | 7_4:+50570476 | None:intergenic |
| CCGAACAAGGAAGTGAATCA+TGG | 0.465495 | 7_4:-50569415 | Msa1160580:CDS |
| TCTCAGCAGGATTCAAACCT+TGG | 0.465528 | 7_4:+50569208 | None:intergenic |
| CCAAATACTGCCTTCGATGT+AGG | 0.466466 | 7_4:-50571325 | Msa1160580:CDS |
| CCAAAGTTGTGAGCCAATCA+TGG | 0.466608 | 7_4:+50571759 | None:intergenic |
| GGAATGGTGGTTGGTGCAGA+AGG | 0.466873 | 7_4:+50573751 | None:intergenic |
| ATAATATCTGGGGCTATAGT+TGG | 0.471731 | 7_4:-50572017 | Msa1160580:CDS |
| AAGTTAGCAGCTAAAGTGAT+AGG | 0.474949 | 7_4:+50572839 | None:intergenic |
| TTTACTTATTGAAACTGTGC+AGG | 0.476007 | 7_4:-50571803 | Msa1160580:CDS |
| AGAATGGAAAAGTAAATCCT+TGG | 0.478857 | 7_4:-50570493 | Msa1160580:CDS |
| ATATGAGTAAGAAGAAGAAA+AGG | 0.479047 | 7_4:-50573324 | Msa1160580:CDS |
| GCCTTTAATCACAGTGACAT+TGG | 0.484809 | 7_4:-50570294 | Msa1160580:CDS |
| AGAAAGAGGTGGCGGCATAC+AGG | 0.485434 | 7_4:+50569608 | None:intergenic |
| GGAATAAAGAGTTCTGTTGT+TGG | 0.486487 | 7_4:-50570345 | Msa1160580:CDS |
| TAAATCCTTGGACAAGTTGA+AGG | 0.490011 | 7_4:-50570481 | Msa1160580:CDS |
| CCTCCTACTTTGTTGATCAC+AGG | 0.493159 | 7_4:-50573358 | Msa1160580:CDS |
| TGGGGCTATAGTTGGAATGC+AGG | 0.493339 | 7_4:-50572009 | Msa1160580:CDS |
| AGAAGCTTCTGGAATTTACA+AGG | 0.494049 | 7_4:-50573137 | Msa1160580:CDS |
| GTTGTTGGTTTACTTAGCAG+TGG | 0.497221 | 7_4:-50570330 | Msa1160580:CDS |
| TATGAATTTCAAGGGGAAAA+GGG | 0.499058 | 7_4:-50572906 | Msa1160580:CDS |
| TGAATATAGAACCGCGTCAA+CGG | 0.500768 | 7_4:+50571192 | None:intergenic |
| TTGAAGGAAGACAAAGAAGA+TGG | 0.501509 | 7_4:-50570465 | Msa1160580:CDS |
| TACTTCATGGGTGCGGAAGA+CGG | 0.501746 | 7_4:+50570182 | None:intergenic |
| TTCCAGAGTGGATAATATCT+GGG | 0.505972 | 7_4:-50572028 | Msa1160580:CDS |
| GTTTGTATTGGTTTCTTCAG+TGG | 0.506922 | 7_4:-50573044 | Msa1160580:CDS |
| TGATTGGCTCACAACTTTGG+TGG | 0.508591 | 7_4:-50571756 | Msa1160580:CDS |
| AGTTATCAACAATTCTTGGT+TGG | 0.510221 | 7_4:-50569551 | Msa1160580:CDS |
| TGTATTGGTTTCTTCAGTGG+AGG | 0.513858 | 7_4:-50573041 | Msa1160580:CDS |
| CATTAGGGTAATGGAGAAAG+AGG | 0.516353 | 7_4:+50569594 | None:intergenic |
| AGTTGGCTGCATATTTGGAC+AGG | 0.517374 | 7_4:-50569449 | Msa1160580:CDS |
| ATGTCGGCATCTCTCTCAGC+AGG | 0.518796 | 7_4:+50569195 | None:intergenic |
| TCATGGATAGAAGCTCCAAT+AGG | 0.521819 | 7_4:-50569398 | Msa1160580:CDS |
| AATTGATGAATAGAGAGCCT+TGG | 0.522284 | 7_4:+50573722 | None:intergenic |
| CAAGAACAAGGTATTGGAAG+AGG | 0.523278 | 7_4:-50572869 | Msa1160580:CDS |
| GCCTTGGACATTAGGAATGG+TGG | 0.524690 | 7_4:+50573738 | None:intergenic |
| ATGAACAAAGATATTGGGGT+TGG | 0.527562 | 7_4:-50571720 | Msa1160580:CDS |
| GAACATTTCACAGAAACCAT+TGG | 0.527950 | 7_4:-50572065 | Msa1160580:CDS |
| TTACAGAATTCAACTGGTGA+AGG | 0.528592 | 7_4:-50569753 | Msa1160580:intron |
| ACTTGACAGAGTACAGATAC+AGG | 0.529662 | 7_4:-50572498 | Msa1160580:intron |
| GGTTGGTTCTGAGTTTCTAG+TGG | 0.531402 | 7_4:-50569534 | Msa1160580:CDS |
| GCCCCAGATATTATCCACTC+TGG | 0.534022 | 7_4:+50572026 | None:intergenic |
| GGGCAGAGAGAAACCATGAT+TGG | 0.534957 | 7_4:-50571772 | Msa1160580:CDS |
| ATTATCCACTCTGGAAGCAC+TGG | 0.535414 | 7_4:+50572035 | None:intergenic |
| ATTGAAGGGCGGATATTGCA+TGG | 0.536273 | 7_4:-50572110 | Msa1160580:CDS |
| AAGGAGATCAAATGGTGAGT+TGG | 0.536433 | 7_4:-50570380 | Msa1160580:CDS |
| TAACAGATATCCTGAACTAT+GGG | 0.537517 | 7_4:-50570541 | Msa1160580:CDS |
| TGTAACCAAAATCCTGAGAC+AGG | 0.541890 | 7_4:+50571933 | None:intergenic |
| GAGGCCGAGAGGGTTTGTAT+TGG | 0.542213 | 7_4:-50573056 | Msa1160580:CDS |
| AAGGGCCATTTGTTTATGCA+AGG | 0.543582 | 7_4:-50573258 | Msa1160580:CDS |
| TTTACAAGGGTTTCAAGAAG+AGG | 0.543736 | 7_4:-50573123 | Msa1160580:CDS |
| ATATACGGAAACTCAATTGA+AGG | 0.544165 | 7_4:-50572125 | Msa1160580:CDS |
| GTGAGTTGGCAAGCAAATGA+TGG | 0.547496 | 7_4:-50570366 | Msa1160580:CDS |
| GTGGTTGGTGCAGAAGGGAA+AGG | 0.553206 | 7_4:+50573757 | None:intergenic |
| TTGCAATCCCTGTCTAGCTC+CGG | 0.554010 | 7_4:-50571647 | Msa1160580:intron |
| CAAAATCAACAGAGAGATTG+TGG | 0.554365 | 7_4:-50570517 | Msa1160580:CDS |
| GTGGTTCCTGTTCTTGACAA+AGG | 0.555848 | 7_4:-50569515 | Msa1160580:CDS |
| GGAGGATGAAAGTGGAGTGA+TGG | 0.556153 | 7_4:-50573023 | Msa1160580:CDS |
| GAATGGTGGTTGGTGCAGAA+GGG | 0.558082 | 7_4:+50573752 | None:intergenic |
| GTGGATGAACAAAGATATTG+GGG | 0.561688 | 7_4:-50571724 | Msa1160580:CDS |
| AAAAGAGGATAGGTTGGTGT+TGG | 0.562926 | 7_4:-50573087 | Msa1160580:CDS |
| ACAAAGATATTGGGGTTGGA+AGG | 0.564659 | 7_4:-50571716 | Msa1160580:CDS |
| ATGAGGTCTCTTTACCTGGA+AGG | 0.566943 | 7_4:-50572551 | Msa1160580:CDS |
| CAAACCCTCTCGGCCTCGAT+AGG | 0.571848 | 7_4:+50573062 | None:intergenic |
| TCTTCAGTGGAGGATGAAAG+TGG | 0.572618 | 7_4:-50573031 | Msa1160580:CDS |
| ATATACAGTTTGAATCAAAA+GGG | 0.578842 | 7_4:-50573276 | Msa1160580:CDS |
| GAAACTGTGCAGGATTGGGT+AGG | 0.578944 | 7_4:-50571793 | Msa1160580:CDS |
| GATGTCATGTAGAATGGGGA+AGG | 0.579176 | 7_4:+50572578 | None:intergenic |
| ACAGATTCTACTTGAAATGG+TGG | 0.583683 | 7_4:-50571260 | Msa1160580:CDS |
| CCTGTGATCAACAAAGTAGG+AGG | 0.584793 | 7_4:+50573358 | None:intergenic |
| TTCTTAATTCATCCCAAACA+CGG | 0.585708 | 7_4:+50571967 | None:intergenic |
| ACTTTGGTGGAATTGGGAAG+TGG | 0.586294 | 7_4:-50571743 | Msa1160580:CDS |
| CTTCCTGTGATCAACAAAGT+AGG | 0.586960 | 7_4:+50573355 | None:intergenic |
| CGAAGGCCTCCCCGTTGACG+CGG | 0.588005 | 7_4:-50571203 | Msa1160580:CDS |
| AAGCACTGGTAGCCTTCCAA+TGG | 0.592511 | 7_4:+50572049 | None:intergenic |
| CTACTTGAAATGGTGGATGA+CGG | 0.593327 | 7_4:-50571253 | Msa1160580:CDS |
| CCAAACACGGCGTACAGCAT+CGG | 0.593757 | 7_4:+50571980 | None:intergenic |
| TTTAATCACAGTGACATTGG+AGG | 0.593827 | 7_4:-50570291 | Msa1160580:CDS |
| AAAATGCCCTCCATTGATTG+TGG | 0.594023 | 7_4:+50573636 | None:intergenic |
| CTACTTTGTTGATCACAGGA+AGG | 0.594118 | 7_4:-50573354 | Msa1160580:CDS |
| AAACTGTGCAGGATTGGGTA+GGG | 0.594862 | 7_4:-50571792 | Msa1160580:CDS |
| TCTTGGTCCACAATCAATGG+AGG | 0.595057 | 7_4:-50573643 | Msa1160580:CDS |
| ATCGAGCATTCCTACATCGA+AGG | 0.598768 | 7_4:+50571315 | None:intergenic |
| GGTAATGGAGAAAGAGGTGG+CGG | 0.598856 | 7_4:+50569600 | None:intergenic |
| ATTGGTATTGACAGGGCAGG+AGG | 0.601923 | 7_4:-50572623 | Msa1160580:intron |
| CATTGGGAGAGAGTAGCAGT+TGG | 0.604965 | 7_4:-50569466 | Msa1160580:CDS |
| ATTTCACAGAAACCATTGGA+AGG | 0.607756 | 7_4:-50572061 | Msa1160580:CDS |
| AAACAGGAAGCAGCACAGAA+AGG | 0.609719 | 7_4:-50569635 | Msa1160580:intron |
| CTTGGTCCACAATCAATGGA+GGG | 0.609794 | 7_4:-50573642 | Msa1160580:CDS |
| GAAGGATGAATGCCAACCAA+CGG | 0.610605 | 7_4:-50569277 | Msa1160580:CDS |
| GGGACTAGTCTCTTACAAGA+TGG | 0.613744 | 7_4:-50569235 | Msa1160580:CDS |
| TGGACATTAGGAATGGTGGT+TGG | 0.613810 | 7_4:+50573742 | None:intergenic |
| ATGAAAGTGATGAGAATGAG+AGG | 0.615474 | 7_4:-50572958 | Msa1160580:CDS |
| AAACTCTGTCACACTTTGCG+CGG | 0.615548 | 7_4:-50569805 | Msa1160580:CDS |
| TTGAAGGGCGGATATTGCAT+GGG | 0.616099 | 7_4:-50572109 | Msa1160580:CDS |
| TATACGGAAACTCAATTGAA+GGG | 0.617010 | 7_4:-50572124 | Msa1160580:CDS |
| TTTCTCATATGAATTTCAAG+GGG | 0.617228 | 7_4:-50572913 | Msa1160580:CDS |
| CCAACCTTAATAAATACAGC+AGG | 0.617716 | 7_4:+50569371 | None:intergenic |
| GGGGCTATAGTTGGAATGCA+GGG | 0.619326 | 7_4:-50572008 | Msa1160580:CDS |
| GAAACCAATACAAACCCTCT+CGG | 0.621595 | 7_4:+50573052 | None:intergenic |
| CCTATCTTAGTTCAAGAACA+AGG | 0.626318 | 7_4:-50572881 | Msa1160580:CDS |
| TGACGGAGTCAGAGGATGGA+TGG | 0.626833 | 7_4:-50571236 | Msa1160580:CDS |
| AGAGCCTTGGACATTAGGAA+TGG | 0.628729 | 7_4:+50573735 | None:intergenic |
| TTTAGAGATAGCCCGAAATG+GGG | 0.628947 | 7_4:-50570417 | Msa1160580:CDS |
| AAATGTTCAATTAGGTCACA+AGG | 0.629845 | 7_4:+50572080 | None:intergenic |
| ACCACCATTCCTAATGTCCA+AGG | 0.629938 | 7_4:-50573739 | Msa1160580:CDS |
| ACAGAGATTGAAGAAAGTAG+AGG | 0.633504 | 7_4:-50573529 | Msa1160580:CDS |
| GAAGCTTCTGGAATTTACAA+GGG | 0.635022 | 7_4:-50573136 | Msa1160580:CDS |
| GGTACCTATCGAGGCCGAGA+GGG | 0.637283 | 7_4:-50573066 | Msa1160580:CDS |
| TGGATGACGGAGTCAGAGGA+TGG | 0.638039 | 7_4:-50571240 | Msa1160580:CDS |
| TAAAACTGGCTGTTGCATGA+TGG | 0.638053 | 7_4:+50569839 | None:intergenic |
| AATATAGAACCGCGTCAACG+GGG | 0.646560 | 7_4:+50571194 | None:intergenic |
| AGCATTACCGGAGCTAGACA+GGG | 0.650231 | 7_4:+50571640 | None:intergenic |
| TTAGAGATAGCCCGAAATGG+GGG | 0.657608 | 7_4:-50570416 | Msa1160580:CDS |
| GGCTACCAGTGCTTCCAGAG+TGG | 0.659909 | 7_4:-50572040 | Msa1160580:CDS |
| GCTATAGTTGGAATGCAGGG+TGG | 0.662631 | 7_4:-50572005 | Msa1160580:CDS |
| CACCGTCGGACACTAAATGT+CGG | 0.668277 | 7_4:+50569179 | None:intergenic |
| GTTGGTGTTGGTACCTATCG+AGG | 0.669645 | 7_4:-50573075 | Msa1160580:CDS |
| TCTTACAAGATGGCAAACCA+AGG | 0.669755 | 7_4:-50569225 | Msa1160580:CDS |
| ATGGTGGATGACGGAGTCAG+AGG | 0.669797 | 7_4:-50571244 | Msa1160580:CDS |
| TCCAGAGTGGATAATATCTG+GGG | 0.671625 | 7_4:-50572027 | Msa1160580:CDS |
| TAGGGTAATGGAGAAAGAGG+TGG | 0.673045 | 7_4:+50569597 | None:intergenic |
| GGATGAATGCCAACCAACGG+GGG | 0.674588 | 7_4:-50569274 | Msa1160580:CDS |
| ATAGAACCGCGTCAACGGGG+AGG | 0.678721 | 7_4:+50571197 | None:intergenic |
| TGGTACCTATCGAGGCCGAG+AGG | 0.683213 | 7_4:-50573067 | Msa1160580:CDS |
| CAACTGCTACTCTCTCCCAA+TGG | 0.686540 | 7_4:+50569467 | None:intergenic |
| ACGGAAACTCAATTGAAGGG+CGG | 0.691210 | 7_4:-50572121 | Msa1160580:CDS |
| CAGTTTCAATAAGTAAACAA+CGG | 0.719234 | 7_4:+50571809 | None:intergenic |
| TTCATGGGTGCGGAAGACGG+TGG | 0.720224 | 7_4:+50570185 | None:intergenic |
| AGGATGAATGCCAACCAACG+GGG | 0.722731 | 7_4:-50569275 | Msa1160580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATATACTTATATATA+AGG | + | chr7_4:50570808-50570827 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTTATCCATT+AGG | + | chr7_4:50572132-50572151 | None:intergenic | 10.0% |
| !! | TGATAAAAAAAAACTGAATT+AGG | + | chr7_4:50570221-50570240 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGGTTATTCAAAA+AGG | + | chr7_4:50573668-50573687 | None:intergenic | 15.0% |
| !! | TTGAATAACCTAAAAAATTT+AGG | - | chr7_4:50573670-50573689 | Msa1160580:CDS | 15.0% |
| !!! | GATGTTTTTTGGTTATTTTA+AGG | + | chr7_4:50569202-50569221 | None:intergenic | 20.0% |
| !! | ATTAGGATTATCAATGAATT+TGG | - | chr7_4:50569551-50569570 | Msa1160580:CDS | 20.0% |
| !! | AAGAAAAGGTTTCAAAAATA+TGG | - | chr7_4:50569686-50569705 | Msa1160580:intron | 20.0% |
| !! | TTTCAAAAATATGGAATTCA+AGG | - | chr7_4:50569695-50569714 | Msa1160580:intron | 20.0% |
| !! | AATATACAGTTTGAATCAAA+AGG | - | chr7_4:50569719-50569738 | Msa1160580:intron | 20.0% |
| !! | ATATACAGTTTGAATCAAAA+GGG | - | chr7_4:50569720-50569739 | Msa1160580:intron | 20.0% |
| !!! | TTTTAGTTCAAGTAATAATG+TGG | - | chr7_4:50569829-50569848 | Msa1160580:CDS | 20.0% |
| !!! | ATTTTCTCATATGAATTTCA+AGG | - | chr7_4:50570081-50570100 | Msa1160580:intron | 20.0% |
| !!! | TTTTCTCATATGAATTTCAA+GGG | - | chr7_4:50570082-50570101 | Msa1160580:intron | 20.0% |
| !!! | TTCAGTTTTTTTTTATCAGT+AGG | - | chr7_4:50570223-50570242 | Msa1160580:CDS | 20.0% |
| !! | TGATTGTTTGAAAATGTAAA+AGG | + | chr7_4:50570575-50570594 | None:intergenic | 20.0% |
| !! | TTAAAAATCACATATACGAT+TGG | + | chr7_4:50570601-50570620 | None:intergenic | 20.0% |
| !! | TGATGATTATAATTGATTGA+TGG | - | chr7_4:50570657-50570676 | Msa1160580:intron | 20.0% |
| !! | AAGAAATTAGTTCATGATAT+TGG | - | chr7_4:50571964-50571983 | Msa1160580:CDS | 20.0% |
| !! | TCATATTAAATAGGTAAGTA+AGG | - | chr7_4:50572021-50572040 | Msa1160580:CDS | 20.0% |
| !! | TGTAAAAATATTTGCATTGA+CGG | - | chr7_4:50572337-50572356 | Msa1160580:intron | 20.0% |
| !! | CTTCTTCTATATTTAACTAT+AGG | + | chr7_4:50572750-50572769 | None:intergenic | 20.0% |
| !! | AAATATAAGGATTGACTATT+CGG | - | chr7_4:50572984-50573003 | Msa1160580:CDS | 20.0% |
| !! | ACTATTGATGAATAAATGAA+TGG | - | chr7_4:50573048-50573067 | Msa1160580:CDS | 20.0% |
| !!! | CAAGATCAAACTTTTTCAAT+TGG | - | chr7_4:50569314-50569333 | Msa1160580:intron | 25.0% |
| !! | ATCAAACCATTGATGATATT+AGG | - | chr7_4:50569534-50569553 | Msa1160580:CDS | 25.0% |
| ! | GATAATCCTAATATCATCAA+TGG | + | chr7_4:50569543-50569562 | None:intergenic | 25.0% |
| ! | ATATGAGTAAGAAGAAGAAA+AGG | - | chr7_4:50569672-50569691 | Msa1160580:intron | 25.0% |
| !! | ATTTGTTTATGCAAGGTATT+GGG | - | chr7_4:50569745-50569764 | Msa1160580:intron | 25.0% |
| ! | AAAACCAAAAGAGTTCAATA+GGG | - | chr7_4:50570003-50570022 | Msa1160580:intron | 25.0% |
| ! | TTTCTCATATGAATTTCAAG+GGG | - | chr7_4:50570083-50570102 | Msa1160580:intron | 25.0% |
| ! | ATATCGTTTATGATTACTAC+CGG | + | chr7_4:50570317-50570336 | None:intergenic | 25.0% |
| !! | TTTTTGATGTCATGTAGAAT+GGG | + | chr7_4:50570426-50570445 | None:intergenic | 25.0% |
| !! | ATTTTTGATGTCATGTAGAA+TGG | + | chr7_4:50570427-50570446 | None:intergenic | 25.0% |
| ! | TTTCTGTGAAATGTTCAATT+AGG | + | chr7_4:50570927-50570946 | None:intergenic | 25.0% |
| !! | AACTTCCGAGAAATAATTTT+CGG | + | chr7_4:50571122-50571141 | None:intergenic | 25.0% |
| ! | CAGTTTCAATAAGTAAACAA+CGG | + | chr7_4:50571190-50571209 | None:intergenic | 25.0% |
| ! | ATATTGGTGAAAGACAATAA+TGG | - | chr7_4:50571632-50571651 | Msa1160580:intron | 25.0% |
| ! | TATTGGTGAAAGACAATAAT+GGG | - | chr7_4:50571633-50571652 | Msa1160580:intron | 25.0% |
| ! | TTGATTCTCATATCTTTCTT+TGG | - | chr7_4:50571831-50571850 | Msa1160580:intron | 25.0% |
| !! | TTCTGTATATTTCTATCAAC+TGG | + | chr7_4:50571913-50571932 | None:intergenic | 25.0% |
| ! | ATGTGTGCATCATATTAAAT+AGG | - | chr7_4:50572012-50572031 | Msa1160580:CDS | 25.0% |
| ! | AAGTAAGGTTATTCTTCAAT+AGG | - | chr7_4:50572036-50572055 | Msa1160580:CDS | 25.0% |
| ! | TCTACATCAAATAACTATGT+AGG | + | chr7_4:50572100-50572119 | None:intergenic | 25.0% |
| ! | AGAACAAAACGATATAACAT+GGG | - | chr7_4:50572167-50572186 | Msa1160580:intron | 25.0% |
| ! | AAGAAAATATGTCATATTGC+AGG | + | chr7_4:50572850-50572869 | None:intergenic | 25.0% |
| ! | AGAATGAAAACTTTCATTGA+TGG | + | chr7_4:50572937-50572956 | None:intergenic | 25.0% |
| ! | CATTACTCTCGATAAATATA+AGG | - | chr7_4:50572971-50572990 | Msa1160580:CDS | 25.0% |
| !! | GAAATTTTACAGAATTCAAC+TGG | - | chr7_4:50573237-50573256 | Msa1160580:CDS | 25.0% |
| ! | GTGTAAAGATGATAGAATTT+AGG | + | chr7_4:50573273-50573292 | None:intergenic | 25.0% |
| ! | CTCTATATTCTTATGTAAAC+AGG | - | chr7_4:50573345-50573364 | Msa1160580:CDS | 25.0% |
| ! | TATGAACATGTTCATCATTA+GGG | + | chr7_4:50573420-50573439 | None:intergenic | 25.0% |
| ! | TTATGAACATGTTCATCATT+AGG | + | chr7_4:50573421-50573440 | None:intergenic | 25.0% |
| !!! | AGTTAAAGCTTATTTTCCAT+TGG | - | chr7_4:50573513-50573532 | Msa1160580:CDS | 25.0% |
| !!! | GTTAAAGCTTATTTTCCATT+GGG | - | chr7_4:50573514-50573533 | Msa1160580:CDS | 25.0% |
| ! | TTATCCTGCTGTATTTATTA+AGG | - | chr7_4:50573621-50573640 | Msa1160580:CDS | 25.0% |
| !!! | GAAGAATGCCTAAATTTTTT+AGG | + | chr7_4:50573681-50573700 | None:intergenic | 25.0% |
| !!! | GAAACGTTTGTGATGTTTTT+TGG | + | chr7_4:50569213-50569232 | None:intergenic | 30.0% |
| ATCTTGTGAAGATAAAGCTT+TGG | + | chr7_4:50569300-50569319 | None:intergenic | 30.0% | |
| ! | CAATGAATTTGGTGATCATT+TGG | - | chr7_4:50569562-50569581 | Msa1160580:CDS | 30.0% |
| GGAATATGAAGTTGAAGATT+TGG | - | chr7_4:50569583-50569602 | Msa1160580:CDS | 30.0% | |
| CAATACCTTGCATAAACAAA+TGG | + | chr7_4:50569746-50569765 | None:intergenic | 30.0% | |
| CATTTGTTTATGCAAGGTAT+TGG | - | chr7_4:50569744-50569763 | Msa1160580:intron | 30.0% | |
| GGTTAAGTAGTAGAAAAAAG+AGG | - | chr7_4:50569894-50569913 | Msa1160580:intron | 30.0% | |
| AGTAGTAGAAAAAAGAGGAT+AGG | - | chr7_4:50569899-50569918 | Msa1160580:intron | 30.0% | |
| !!! | CTATTGAACTCTTTTGGTTT+TGG | + | chr7_4:50570004-50570023 | None:intergenic | 30.0% |
| CAAAACCAAAAGAGTTCAAT+AGG | - | chr7_4:50570002-50570021 | Msa1160580:intron | 30.0% | |
| !! | AATGAGAGGTTTTATGGTTT+TGG | - | chr7_4:50570052-50570071 | Msa1160580:intron | 30.0% |
| !! | ATGAGAGGTTTTATGGTTTT+GGG | - | chr7_4:50570053-50570072 | Msa1160580:intron | 30.0% |
| ATATGAATTTCAAGGGGAAA+AGG | - | chr7_4:50570089-50570108 | Msa1160580:intron | 30.0% | |
| TATGAATTTCAAGGGGAAAA+GGG | - | chr7_4:50570090-50570109 | Msa1160580:intron | 30.0% | |
| TTAGTTCAAGAACAAGGTAT+TGG | - | chr7_4:50570121-50570140 | Msa1160580:intron | 30.0% | |
| ! | TTTTGATGTCATGTAGAATG+GGG | + | chr7_4:50570425-50570444 | None:intergenic | 30.0% |
| TCTACATGACATCAAAAATG+AGG | - | chr7_4:50570428-50570447 | Msa1160580:CDS | 30.0% | |
| !! | AAGTTTTGTAAGATCGAAGA+TGG | + | chr7_4:50570482-50570501 | None:intergenic | 30.0% |
| !! | GATTGATGGTGTAATAACTT+AGG | - | chr7_4:50570671-50570690 | Msa1160580:intron | 30.0% |
| ATATACGGAAACTCAATTGA+AGG | - | chr7_4:50570871-50570890 | Msa1160580:intron | 30.0% | |
| TATACGGAAACTCAATTGAA+GGG | - | chr7_4:50570872-50570891 | Msa1160580:intron | 30.0% | |
| AAATGTTCAATTAGGTCACA+AGG | + | chr7_4:50570919-50570938 | None:intergenic | 30.0% | |
| TTCTTAATTCATCCCAAACA+CGG | + | chr7_4:50571032-50571051 | None:intergenic | 30.0% | |
| ! | AATGGCCGAAAATTATTTCT+CGG | - | chr7_4:50571114-50571133 | Msa1160580:intron | 30.0% |
| TTTACTTATTGAAACTGTGC+AGG | - | chr7_4:50571193-50571212 | Msa1160580:CDS | 30.0% | |
| AAGTGGATGAACAAAGATAT+TGG | - | chr7_4:50571270-50571289 | Msa1160580:CDS | 30.0% | |
| AGTGGATGAACAAAGATATT+GGG | - | chr7_4:50571271-50571290 | Msa1160580:CDS | 30.0% | |
| !! | TGATTAAAGAGAAGCATTAC+CGG | + | chr7_4:50571371-50571390 | None:intergenic | 30.0% |
| GTCAAACAAAATGATAGTAC+AGG | - | chr7_4:50571489-50571508 | Msa1160580:intron | 30.0% | |
| ! | ATTGTTTTCTCTGACACTAT+AGG | - | chr7_4:50571553-50571572 | Msa1160580:intron | 30.0% |
| ! | CAAAAAGAGAAACCTTTTTG+AGG | - | chr7_4:50571592-50571611 | Msa1160580:intron | 30.0% |
| ! | CAATAATGGGAATGCATATA+TGG | - | chr7_4:50571646-50571665 | Msa1160580:intron | 30.0% |
| CAAACAGATTCTACTTGAAA+TGG | - | chr7_4:50571733-50571752 | Msa1160580:CDS | 30.0% | |
| GAGAACAAAACGATATAACA+TGG | - | chr7_4:50572166-50572185 | Msa1160580:intron | 30.0% | |
| GACAGTGTAAAATATCTTCA+CGG | + | chr7_4:50572217-50572236 | None:intergenic | 30.0% | |
| ! | ATTTTCTACTTCACATATCC+AGG | - | chr7_4:50572411-50572430 | Msa1160580:intron | 30.0% |
| ATAACAGATATCCTGAACTA+TGG | - | chr7_4:50572454-50572473 | Msa1160580:intron | 30.0% | |
| TAACAGATATCCTGAACTAT+GGG | - | chr7_4:50572455-50572474 | Msa1160580:intron | 30.0% | |
| AGAATGGAAAAGTAAATCCT+TGG | - | chr7_4:50572503-50572522 | Msa1160580:CDS | 30.0% | |
| !! | GGTATTTTTGCTTACTTCAT+GGG | + | chr7_4:50572829-50572848 | None:intergenic | 30.0% |
| !! | AGGTATTTTTGCTTACTTCA+TGG | + | chr7_4:50572830-50572849 | None:intergenic | 30.0% |
| TGATGAGTATAATTGTGCTA+AGG | + | chr7_4:50572899-50572918 | None:intergenic | 30.0% | |
| ! | TTTGATGGTTTGAGTAAAAC+TGG | + | chr7_4:50573174-50573193 | None:intergenic | 30.0% |
| CTTGAGTTATCAACAATTCT+TGG | - | chr7_4:50573441-50573460 | Msa1160580:CDS | 30.0% | |
| AGTTATCAACAATTCTTGGT+TGG | - | chr7_4:50573445-50573464 | Msa1160580:CDS | 30.0% | |
| ! | ATTAAGGTTGGTTCCATTAT+TGG | - | chr7_4:50573637-50573656 | Msa1160580:CDS | 30.0% |
| CAAAAAGGTTTCTCCAATAA+TGG | + | chr7_4:50573653-50573672 | None:intergenic | 30.0% | |
| ! | AATGAAGCATTCATTGAAGA+AGG | - | chr7_4:50573701-50573720 | Msa1160580:CDS | 30.0% |
| AATTGATGAATAGAGAGCCT+TGG | + | chr7_4:50569277-50569296 | None:intergenic | 35.0% | |
| ! | GCAATGATTTTCAGCTTTCT+TGG | - | chr7_4:50569336-50569355 | Msa1160580:intron | 35.0% |
| CTCAGAAAACTAGACCAATT+TGG | - | chr7_4:50569399-50569418 | Msa1160580:CDS | 35.0% | |
| ACAGAGATTGAAGAAAGTAG+AGG | - | chr7_4:50569467-50569486 | Msa1160580:CDS | 35.0% | |
| CAATCAGAAAAACAAGCATG+AGG | - | chr7_4:50569775-50569794 | Msa1160580:CDS | 35.0% | |
| TTGTAAATTCCAGAAGCTTC+TGG | + | chr7_4:50569860-50569879 | None:intergenic | 35.0% | |
| !! | AGAAGCTTCTGGAATTTACA+AGG | - | chr7_4:50569859-50569878 | Msa1160580:intron | 35.0% |
| !! | GAAGCTTCTGGAATTTACAA+GGG | - | chr7_4:50569860-50569879 | Msa1160580:intron | 35.0% |
| TTTACAAGGGTTTCAAGAAG+AGG | - | chr7_4:50569873-50569892 | Msa1160580:intron | 35.0% | |
| GTAGAAAAAAGAGGATAGGT+TGG | - | chr7_4:50569903-50569922 | Msa1160580:intron | 35.0% | |
| !! | GTTTGTATTGGTTTCTTCAG+TGG | - | chr7_4:50569952-50569971 | Msa1160580:intron | 35.0% |
| ! | CAAACCCTATTGAACTCTTT+TGG | + | chr7_4:50570010-50570029 | None:intergenic | 35.0% |
| CAAAAGAGTTCAATAGGGTT+TGG | - | chr7_4:50570008-50570027 | Msa1160580:intron | 35.0% | |
| ATGAAAGTGATGAGAATGAG+AGG | - | chr7_4:50570038-50570057 | Msa1160580:intron | 35.0% | |
| ! | GATGAGAATGAGAGGTTTTA+TGG | - | chr7_4:50570046-50570065 | Msa1160580:intron | 35.0% |
| !! | TGAGAGGTTTTATGGTTTTG+GGG | - | chr7_4:50570054-50570073 | Msa1160580:intron | 35.0% |
| CCTTGTTCTTGAACTAAGAT+AGG | + | chr7_4:50570118-50570137 | None:intergenic | 35.0% | |
| CCTATCTTAGTTCAAGAACA+AGG | - | chr7_4:50570115-50570134 | Msa1160580:intron | 35.0% | |
| AAGTTAGCAGCTAAAGTGAT+AGG | + | chr7_4:50570160-50570179 | None:intergenic | 35.0% | |
| TATCACTTTAGCTGCTAACT+TGG | - | chr7_4:50570159-50570178 | Msa1160580:intron | 35.0% | |
| ! | TGTGAGTGTTGTAAATCTCA+GGG | + | chr7_4:50570263-50570282 | None:intergenic | 35.0% |
| ACACAATGATAGCCTTTCAT+TGG | - | chr7_4:50570355-50570374 | Msa1160580:CDS | 35.0% | |
| AAAAATGAGGTCTCTTTACC+TGG | - | chr7_4:50570441-50570460 | Msa1160580:CDS | 35.0% | |
| TGGTATAATCATATCCTTCC+AGG | + | chr7_4:50570462-50570481 | None:intergenic | 35.0% | |
| !! | TGTAATAACTTAGGTGCTGA+TGG | - | chr7_4:50570680-50570699 | Msa1160580:intron | 35.0% |
| ! | GTTTCCAATTTTCTGTACAC+TGG | - | chr7_4:50570839-50570858 | Msa1160580:intron | 35.0% |
| GAACATTTCACAGAAACCAT+TGG | - | chr7_4:50570931-50570950 | Msa1160580:intron | 35.0% | |
| ATTTCACAGAAACCATTGGA+AGG | - | chr7_4:50570935-50570954 | Msa1160580:intron | 35.0% | |
| TTCCAGAGTGGATAATATCT+GGG | - | chr7_4:50570968-50570987 | Msa1160580:intron | 35.0% | |
| ! | ATAATATCTGGGGCTATAGT+TGG | - | chr7_4:50570979-50570998 | Msa1160580:intron | 35.0% |
| !!! | TTCATTGAGTGTTTTGGTGA+GGG | + | chr7_4:50571095-50571114 | None:intergenic | 35.0% |
| !!! | TTTCATTGAGTGTTTTGGTG+AGG | + | chr7_4:50571096-50571115 | None:intergenic | 35.0% |
| CACCAAAACACTCAATGAAA+TGG | - | chr7_4:50571096-50571115 | Msa1160580:intron | 35.0% | |
| ! | TCGCAAACTTCTGAGAAATA+TGG | + | chr7_4:50571163-50571182 | None:intergenic | 35.0% |
| TTATTGAAACTGTGCAGGAT+TGG | - | chr7_4:50571198-50571217 | Msa1160580:CDS | 35.0% | |
| TATTGAAACTGTGCAGGATT+GGG | - | chr7_4:50571199-50571218 | Msa1160580:CDS | 35.0% | |
| GTGGATGAACAAAGATATTG+GGG | - | chr7_4:50571272-50571291 | Msa1160580:CDS | 35.0% | |
| ATGAACAAAGATATTGGGGT+TGG | - | chr7_4:50571276-50571295 | Msa1160580:CDS | 35.0% | |
| CAATCGTGATCTTCCTAATA+TGG | + | chr7_4:50571517-50571536 | None:intergenic | 35.0% | |
| TATTAGGAAGATCACGATTG+CGG | - | chr7_4:50571517-50571536 | Msa1160580:intron | 35.0% | |
| !! | AAAGAGAAACCTTTTTGAGG+AGG | - | chr7_4:50571595-50571614 | Msa1160580:intron | 35.0% |
| ! | TGAACCAAGTTGCAGTTTTT+GGG | + | chr7_4:50571715-50571734 | None:intergenic | 35.0% |
| ! | TTGAACCAAGTTGCAGTTTT+TGG | + | chr7_4:50571716-50571735 | None:intergenic | 35.0% |
| ACAGATTCTACTTGAAATGG+TGG | - | chr7_4:50571736-50571755 | Msa1160580:CDS | 35.0% | |
| !!! | TTAGAAAACCCTTTTGAAGC+AGG | + | chr7_4:50571888-50571907 | None:intergenic | 35.0% |
| TGTAGAAAACTCACTCCTAA+TGG | - | chr7_4:50572114-50572133 | Msa1160580:CDS | 35.0% | |
| AACAATCACTAGCTCATACT+TGG | + | chr7_4:50572383-50572402 | None:intergenic | 35.0% | |
| !!! | CACAATCTCTCTGTTGATTT+TGG | + | chr7_4:50572481-50572500 | None:intergenic | 35.0% |
| CAAAATCAACAGAGAGATTG+TGG | - | chr7_4:50572479-50572498 | Msa1160580:intron | 35.0% | |
| ! | TAAATCCTTGGACAAGTTGA+AGG | - | chr7_4:50572515-50572534 | Msa1160580:CDS | 35.0% |
| TTGAAGGAAGACAAAGAAGA+TGG | - | chr7_4:50572531-50572550 | Msa1160580:CDS | 35.0% | |
| !!! | ATGGTTTGGTTTTCTTCATG+AGG | - | chr7_4:50572550-50572569 | Msa1160580:CDS | 35.0% |
| !!! | TGGTTTGGTTTTCTTCATGA+GGG | - | chr7_4:50572551-50572570 | Msa1160580:CDS | 35.0% |
| !! | TTTTAGAGATAGCCCGAAAT+GGG | - | chr7_4:50572578-50572597 | Msa1160580:CDS | 35.0% |
| !! | ATTTTGGGAAGGAGATCAAA+TGG | - | chr7_4:50572608-50572627 | Msa1160580:CDS | 35.0% |
| GGAATAAAGAGTTCTGTTGT+TGG | - | chr7_4:50572651-50572670 | Msa1160580:intron | 35.0% | |
| TTACTTAGCAGTGGAATTTC+TGG | - | chr7_4:50572675-50572694 | Msa1160580:intron | 35.0% | |
| TCCAATGTCACTGTGATTAA+AGG | + | chr7_4:50572706-50572725 | None:intergenic | 35.0% | |
| TTTAATCACAGTGACATTGG+AGG | - | chr7_4:50572705-50572724 | Msa1160580:intron | 35.0% | |
| !! | CCATGCTGTGTATATTTTTG+CGG | + | chr7_4:50573218-50573237 | None:intergenic | 35.0% |
| TTACAGAATTCAACTGGTGA+AGG | - | chr7_4:50573243-50573262 | Msa1160580:CDS | 35.0% | |
| AACTCAGCAGGCTTATAAAA+TGG | - | chr7_4:50573318-50573337 | Msa1160580:CDS | 35.0% | |
| CATGTTCATCATTAGGGTAA+TGG | + | chr7_4:50573414-50573433 | None:intergenic | 35.0% | |
| TTCTTTCCTTTGTCAAGAAC+AGG | + | chr7_4:50573490-50573509 | None:intergenic | 35.0% | |
| !!! | GGAAAAGTATTTTCCGAACA+AGG | - | chr7_4:50573568-50573587 | Msa1160580:CDS | 35.0% |
| AATACAGCAGGATAACCTAT+TGG | + | chr7_4:50573616-50573635 | None:intergenic | 35.0% | |
| CCAACCTTAATAAATACAGC+AGG | + | chr7_4:50573628-50573647 | None:intergenic | 35.0% | |
| CCTGCTGTATTTATTAAGGT+TGG | - | chr7_4:50573625-50573644 | Msa1160580:CDS | 35.0% | |
| AATAGAGAGCCTTGGACATT+AGG | + | chr7_4:50569269-50569288 | None:intergenic | 40.0% | |
| CTTTCTTGGTCCACAATCAA+TGG | - | chr7_4:50569350-50569369 | Msa1160580:intron | 40.0% | |
| ! | AAAATGCCCTCCATTGATTG+TGG | + | chr7_4:50569363-50569382 | None:intergenic | 40.0% |
| CCTGAGATTGTAGACCAAAT+TGG | + | chr7_4:50569416-50569435 | None:intergenic | 40.0% | |
| CCAATTTGGTCTACAATCTC+AGG | - | chr7_4:50569413-50569432 | Msa1160580:CDS | 40.0% | |
| CTTCCTGTGATCAACAAAGT+AGG | + | chr7_4:50569644-50569663 | None:intergenic | 40.0% | |
| CTACTTTGTTGATCACAGGA+AGG | - | chr7_4:50569642-50569661 | Msa1160580:intron | 40.0% | |
| AAGGGCCATTTGTTTATGCA+AGG | - | chr7_4:50569738-50569757 | Msa1160580:intron | 40.0% | |
| CAGAAAAACAAGCATGAGGT+TGG | - | chr7_4:50569779-50569798 | Msa1160580:CDS | 40.0% | |
| !! | AAAAGAGGATAGGTTGGTGT+TGG | - | chr7_4:50569909-50569928 | Msa1160580:intron | 40.0% |
| GAAACCAATACAAACCCTCT+CGG | + | chr7_4:50569947-50569966 | None:intergenic | 40.0% | |
| !! | TGTATTGGTTTCTTCAGTGG+AGG | - | chr7_4:50569955-50569974 | Msa1160580:intron | 40.0% |
| !! | CAAGAACAAGGTATTGGAAG+AGG | - | chr7_4:50570127-50570146 | Msa1160580:intron | 40.0% |
| ! | CTGCTAACTTGGTTAGTTAC+AGG | - | chr7_4:50570170-50570189 | Msa1160580:intron | 40.0% |
| ! | GTGTGAGTGTTGTAAATCTC+AGG | + | chr7_4:50570264-50570283 | None:intergenic | 40.0% |
| !! | AGCCTTTCATTGGTATTGAC+AGG | - | chr7_4:50570365-50570384 | Msa1160580:CDS | 40.0% |
| !! | GCCTTTCATTGGTATTGACA+GGG | - | chr7_4:50570366-50570385 | Msa1160580:CDS | 40.0% |
| ACTTGACAGAGTACAGATAC+AGG | - | chr7_4:50570498-50570517 | Msa1160580:CDS | 40.0% | |
| ! | TTTTGATACACCGTCGTTGT+AGG | - | chr7_4:50570548-50570567 | Msa1160580:CDS | 40.0% |
| TGTAAAAGGTCCTACAACGA+CGG | + | chr7_4:50570561-50570580 | None:intergenic | 40.0% | |
| !! | AATAACTTAGGTGCTGATGG+CGG | - | chr7_4:50570683-50570702 | Msa1160580:intron | 40.0% |
| AGCTCCAGTGTACAGAAAAT+TGG | + | chr7_4:50570846-50570865 | None:intergenic | 40.0% | |
| CTTCCAGAGTGGATAATATC+TGG | - | chr7_4:50570967-50570986 | Msa1160580:intron | 40.0% | |
| TCCAGAGTGGATAATATCTG+GGG | - | chr7_4:50570969-50570988 | Msa1160580:intron | 40.0% | |
| TGTAACCAAAATCCTGAGAC+AGG | + | chr7_4:50571066-50571085 | None:intergenic | 40.0% | |
| !!! | TGTCTCAGGATTTTGGTTAC+AGG | - | chr7_4:50571065-50571084 | Msa1160580:intron | 40.0% |
| ! | GGCCATTTCATTGAGTGTTT+TGG | + | chr7_4:50571101-50571120 | None:intergenic | 40.0% |
| CTCACAACTTTGGTGGAATT+GGG | - | chr7_4:50571247-50571266 | Msa1160580:CDS | 40.0% | |
| ACAAAGATATTGGGGTTGGA+AGG | - | chr7_4:50571280-50571299 | Msa1160580:CDS | 40.0% | |
| ! | GATAGTACAGGTGCCATATT+AGG | - | chr7_4:50571501-50571520 | Msa1160580:intron | 40.0% |
| ! | ACTGTTTTGCCTCCTCAAAA+AGG | + | chr7_4:50571607-50571626 | None:intergenic | 40.0% |
| !! | TTTTGAGGAGGCAAAACAGT+TGG | - | chr7_4:50571607-50571626 | Msa1160580:intron | 40.0% |
| GGCAAAACAGTTGGACATAT+TGG | - | chr7_4:50571616-50571635 | Msa1160580:intron | 40.0% | |
| !! | CTACTTGAAATGGTGGATGA+CGG | - | chr7_4:50571743-50571762 | Msa1160580:CDS | 40.0% |
| TGAATATAGAACCGCGTCAA+CGG | + | chr7_4:50571807-50571826 | None:intergenic | 40.0% | |
| !!! | AAAACCCTTTTGAAGCAGGT+AGG | + | chr7_4:50571884-50571903 | None:intergenic | 40.0% |
| GTCACACTCACACATATGAT+TGG | - | chr7_4:50572297-50572316 | Msa1160580:intron | 40.0% | |
| GCTGAAATAGAATCTTCACC+TGG | + | chr7_4:50572432-50572451 | None:intergenic | 40.0% | |
| !! | TTGATTTTGGCCCATAGTTC+AGG | + | chr7_4:50572468-50572487 | None:intergenic | 40.0% |
| ACAGAGAGATTGTGGAAGAA+TGG | - | chr7_4:50572487-50572506 | Msa1160580:intron | 40.0% | |
| GGAAGACAAAGAAGATGGTT+TGG | - | chr7_4:50572536-50572555 | Msa1160580:CDS | 40.0% | |
| !!! | GTTTTAGAGATAGCCCGAAA+TGG | - | chr7_4:50572577-50572596 | Msa1160580:CDS | 40.0% |
| TTTAGAGATAGCCCGAAATG+GGG | - | chr7_4:50572579-50572598 | Msa1160580:CDS | 40.0% | |
| AAAATAGCATCCCCCATTTC+GGG | + | chr7_4:50572593-50572612 | None:intergenic | 40.0% | |
| CAAAATAGCATCCCCCATTT+CGG | + | chr7_4:50572594-50572613 | None:intergenic | 40.0% | |
| !!! | GAAATGGGGGATGCTATTTT+GGG | - | chr7_4:50572593-50572612 | Msa1160580:CDS | 40.0% |
| AAGGAGATCAAATGGTGAGT+TGG | - | chr7_4:50572616-50572635 | Msa1160580:intron | 40.0% | |
| !! | GTTGTTGGTTTACTTAGCAG+TGG | - | chr7_4:50572666-50572685 | Msa1160580:intron | 40.0% |
| GCCTTTAATCACAGTGACAT+TGG | - | chr7_4:50572702-50572721 | Msa1160580:intron | 40.0% | |
| !! | GTCAAGAATTGCTTTTGCGT+TGG | - | chr7_4:50572769-50572788 | Msa1160580:intron | 40.0% |
| !! | AGAATTGCTTTTGCGTTGGA+TGG | - | chr7_4:50572773-50572792 | Msa1160580:intron | 40.0% |
| ! | TTTTGCTTACTTCATGGGTG+CGG | + | chr7_4:50572824-50572843 | None:intergenic | 40.0% |
| !! | CAACTCACTTTAGAGTGTAG+AGG | - | chr7_4:50573014-50573033 | Msa1160580:CDS | 40.0% |
| TAAAACTGGCTGTTGCATGA+TGG | + | chr7_4:50573160-50573179 | None:intergenic | 40.0% | |
| CAAAGTGTGACAGAGTTTGA+TGG | + | chr7_4:50573189-50573208 | None:intergenic | 40.0% | |
| CCGCAAAAATATACACAGCA+TGG | - | chr7_4:50573215-50573234 | Msa1160580:CDS | 40.0% | |
| ! | TGCTGAGTTTGCTTTGTACA+TGG | + | chr7_4:50573307-50573326 | None:intergenic | 40.0% |
| ATGTACAAAGCAAACTCAGC+AGG | - | chr7_4:50573306-50573325 | Msa1160580:CDS | 40.0% | |
| !! | CATTAGGGTAATGGAGAAAG+AGG | + | chr7_4:50573405-50573424 | None:intergenic | 40.0% |
| CCATGATTCACTTCCTTGTT+CGG | + | chr7_4:50573584-50573603 | None:intergenic | 40.0% | |
| TCATGGATAGAAGCTCCAAT+AGG | - | chr7_4:50573598-50573617 | Msa1160580:CDS | 40.0% | |
| TCTTACAAGATGGCAAACCA+AGG | - | chr7_4:50573771-50573790 | Msa1160580:CDS | 40.0% | |
| TGGACATTAGGAATGGTGGT+TGG | + | chr7_4:50569257-50569276 | None:intergenic | 45.0% | |
| ACCACCATTCCTAATGTCCA+AGG | - | chr7_4:50569257-50569276 | Msa1160580:CDS | 45.0% | |
| AGAGCCTTGGACATTAGGAA+TGG | + | chr7_4:50569264-50569283 | None:intergenic | 45.0% | |
| TCTTGGTCCACAATCAATGG+AGG | - | chr7_4:50569353-50569372 | Msa1160580:intron | 45.0% | |
| CTTGGTCCACAATCAATGGA+GGG | - | chr7_4:50569354-50569373 | Msa1160580:intron | 45.0% | |
| !! | TGCTTTTGTTTCAGCTGCAG+TGG | - | chr7_4:50569439-50569458 | Msa1160580:CDS | 45.0% |
| CCTGTGATCAACAAAGTAGG+AGG | + | chr7_4:50569641-50569660 | None:intergenic | 45.0% | |
| CCTCCTACTTTGTTGATCAC+AGG | - | chr7_4:50569638-50569657 | Msa1160580:intron | 45.0% | |
| TCTTCAGTGGAGGATGAAAG+TGG | - | chr7_4:50569965-50569984 | Msa1160580:intron | 45.0% | |
| CAACAATTTGCGCTAGACTC+CGG | - | chr7_4:50570295-50570314 | Msa1160580:CDS | 45.0% | |
| GCCCTGTCAATACCAATGAA+AGG | + | chr7_4:50570370-50570389 | None:intergenic | 45.0% | |
| !! | TTCATTGGTATTGACAGGGC+AGG | - | chr7_4:50570370-50570389 | Msa1160580:CDS | 45.0% |
| GATGTCATGTAGAATGGGGA+AGG | + | chr7_4:50570421-50570440 | None:intergenic | 45.0% | |
| ATGAGGTCTCTTTACCTGGA+AGG | - | chr7_4:50570445-50570464 | Msa1160580:CDS | 45.0% | |
| CACTGGAGCTTGCAGATATA+CGG | - | chr7_4:50570856-50570875 | Msa1160580:intron | 45.0% | |
| ACGGAAACTCAATTGAAGGG+CGG | - | chr7_4:50570875-50570894 | Msa1160580:intron | 45.0% | |
| ATTGAAGGGCGGATATTGCA+TGG | - | chr7_4:50570886-50570905 | Msa1160580:intron | 45.0% | |
| TTGAAGGGCGGATATTGCAT+GGG | - | chr7_4:50570887-50570906 | Msa1160580:intron | 45.0% | |
| ! | ATTATCCACTCTGGAAGCAC+TGG | + | chr7_4:50570964-50570983 | None:intergenic | 45.0% |
| ACTTATGACGTTCCTGTCTC+AGG | - | chr7_4:50571051-50571070 | Msa1160580:intron | 45.0% | |
| ! | ACGTTCCTGTCTCAGGATTT+TGG | - | chr7_4:50571058-50571077 | Msa1160580:intron | 45.0% |
| AAACTGTGCAGGATTGGGTA+GGG | - | chr7_4:50571204-50571223 | Msa1160580:CDS | 45.0% | |
| CCAAAGTTGTGAGCCAATCA+TGG | + | chr7_4:50571240-50571259 | None:intergenic | 45.0% | |
| ! | CCATGATTGGCTCACAACTT+TGG | - | chr7_4:50571237-50571256 | Msa1160580:CDS | 45.0% |
| ! | TGATTGGCTCACAACTTTGG+TGG | - | chr7_4:50571240-50571259 | Msa1160580:CDS | 45.0% |
| GCTCACAACTTTGGTGGAAT+TGG | - | chr7_4:50571246-50571265 | Msa1160580:CDS | 45.0% | |
| ACTTTGGTGGAATTGGGAAG+TGG | - | chr7_4:50571253-50571272 | Msa1160580:CDS | 45.0% | |
| CCTACATCGAAGGCAGTATT+TGG | + | chr7_4:50571674-50571693 | None:intergenic | 45.0% | |
| CCAAATACTGCCTTCGATGT+AGG | - | chr7_4:50571671-50571690 | Msa1160580:CDS | 45.0% | |
| ATCGAGCATTCCTACATCGA+AGG | + | chr7_4:50571684-50571703 | None:intergenic | 45.0% | |
| CTCACCCAAAAACTGCAACT+TGG | - | chr7_4:50571708-50571727 | Msa1160580:CDS | 45.0% | |
| !! | AGAGGATGGATGGCTGATTT+TGG | - | chr7_4:50571770-50571789 | Msa1160580:CDS | 45.0% |
| AATATAGAACCGCGTCAACG+GGG | + | chr7_4:50571805-50571824 | None:intergenic | 45.0% | |
| GAATATAGAACCGCGTCAAC+GGG | + | chr7_4:50571806-50571825 | None:intergenic | 45.0% | |
| GTTGACGCGGTTCTATATTC+AGG | - | chr7_4:50571806-50571825 | Msa1160580:CDS | 45.0% | |
| AACCTCCTACCTGCTTCAAA+AGG | - | chr7_4:50571876-50571895 | Msa1160580:intron | 45.0% | |
| ACCTCCTACCTGCTTCAAAA+GGG | - | chr7_4:50571877-50571896 | Msa1160580:intron | 45.0% | |
| GTCTTCCTTCAACTTGTCCA+AGG | + | chr7_4:50572523-50572542 | None:intergenic | 45.0% | |
| !! | TTGGTTTTCTTCATGAGGGC+TGG | - | chr7_4:50572555-50572574 | Msa1160580:CDS | 45.0% |
| TTAGAGATAGCCCGAAATGG+GGG | - | chr7_4:50572580-50572599 | Msa1160580:CDS | 45.0% | |
| !! | CGAAATGGGGGATGCTATTT+TGG | - | chr7_4:50572592-50572611 | Msa1160580:CDS | 45.0% |
| ! | GTGAGTTGGCAAGCAAATGA+TGG | - | chr7_4:50572630-50572649 | Msa1160580:intron | 45.0% |
| ! | TGATGCTTTTCCTGCAACCA+GGG | - | chr7_4:50573127-50573146 | Msa1160580:CDS | 45.0% |
| !! | TGCATGATGGTTTGTTTCCC+TGG | + | chr7_4:50573147-50573166 | None:intergenic | 45.0% |
| AAACTCTGTCACACTTTGCG+CGG | - | chr7_4:50573191-50573210 | Msa1160580:CDS | 45.0% | |
| AAACAGGAAGCAGCACAGAA+AGG | - | chr7_4:50573361-50573380 | Msa1160580:CDS | 45.0% | |
| !! | TAGGGTAATGGAGAAAGAGG+TGG | + | chr7_4:50573402-50573421 | None:intergenic | 45.0% |
| !! | GGTTGGTTCTGAGTTTCTAG+TGG | - | chr7_4:50573462-50573481 | Msa1160580:CDS | 45.0% |
| GTGGTTCCTGTTCTTGACAA+AGG | - | chr7_4:50573481-50573500 | Msa1160580:CDS | 45.0% | |
| GTAGCAGTTGGCTGCATATT+TGG | - | chr7_4:50573542-50573561 | Msa1160580:CDS | 45.0% | |
| AGTTGGCTGCATATTTGGAC+AGG | - | chr7_4:50573547-50573566 | Msa1160580:CDS | 45.0% | |
| CCGAACAAGGAAGTGAATCA+TGG | - | chr7_4:50573581-50573600 | Msa1160580:CDS | 45.0% | |
| GAAGGATGAATGCCAACCAA+CGG | - | chr7_4:50573719-50573738 | Msa1160580:CDS | 45.0% | |
| AAGGATGAATGCCAACCAAC+GGG | - | chr7_4:50573720-50573739 | Msa1160580:CDS | 45.0% | |
| !! | GGGACTAGTCTCTTACAAGA+TGG | - | chr7_4:50573761-50573780 | Msa1160580:CDS | 45.0% |
| TCTCAGCAGGATTCAAACCT+TGG | + | chr7_4:50573791-50573810 | None:intergenic | 45.0% | |
| ! | GAATGGTGGTTGGTGCAGAA+GGG | + | chr7_4:50569247-50569266 | None:intergenic | 50.0% |
| GCCTTGGACATTAGGAATGG+TGG | + | chr7_4:50569261-50569280 | None:intergenic | 50.0% | |
| !! | GTTGGTGTTGGTACCTATCG+AGG | - | chr7_4:50569921-50569940 | Msa1160580:intron | 50.0% |
| GGAGGATGAAAGTGGAGTGA+TGG | - | chr7_4:50569973-50569992 | Msa1160580:intron | 50.0% | |
| CGGAGTCTAGCGCAAATTGT+TGG | + | chr7_4:50570297-50570316 | None:intergenic | 50.0% | |
| !! | ATTGGTATTGACAGGGCAGG+AGG | - | chr7_4:50570373-50570392 | Msa1160580:CDS | 50.0% |
| !! | AAGCACTGGTAGCCTTCCAA+TGG | + | chr7_4:50570950-50570969 | None:intergenic | 50.0% |
| GCCCCAGATATTATCCACTC+TGG | + | chr7_4:50570973-50570992 | None:intergenic | 50.0% | |
| TGGGGCTATAGTTGGAATGC+AGG | - | chr7_4:50570987-50571006 | Msa1160580:intron | 50.0% | |
| GGGGCTATAGTTGGAATGCA+GGG | - | chr7_4:50570988-50571007 | Msa1160580:intron | 50.0% | |
| GCTATAGTTGGAATGCAGGG+TGG | - | chr7_4:50570991-50571010 | Msa1160580:intron | 50.0% | |
| GAAACTGTGCAGGATTGGGT+AGG | - | chr7_4:50571203-50571222 | Msa1160580:CDS | 50.0% | |
| GGGCAGAGAGAAACCATGAT+TGG | - | chr7_4:50571224-50571243 | Msa1160580:CDS | 50.0% | |
| ! | TTGCAATCCCTGTCTAGCTC+CGG | - | chr7_4:50571349-50571368 | Msa1160580:CDS | 50.0% |
| AGCATTACCGGAGCTAGACA+GGG | + | chr7_4:50571359-50571378 | None:intergenic | 50.0% | |
| AAGCATTACCGGAGCTAGAC+AGG | + | chr7_4:50571360-50571379 | None:intergenic | 50.0% | |
| !! | TGGATGGCTGATTTTGGCGA+AGG | - | chr7_4:50571776-50571795 | Msa1160580:CDS | 50.0% |
| !!! | ACCCTTTTGAAGCAGGTAGG+AGG | + | chr7_4:50571881-50571900 | None:intergenic | 50.0% |
| !!! | TGGGGGATGCTATTTTGGGA+AGG | - | chr7_4:50572597-50572616 | Msa1160580:CDS | 50.0% |
| TACTTCATGGGTGCGGAAGA+CGG | + | chr7_4:50572817-50572836 | None:intergenic | 50.0% | |
| ! | CTGATGCTTTTCCTGCAACC+AGG | - | chr7_4:50573126-50573145 | Msa1160580:CDS | 50.0% |
| !! | TGGTTTGTTTCCCTGGTTGC+AGG | + | chr7_4:50573140-50573159 | None:intergenic | 50.0% |
| !! | GGTAATGGAGAAAGAGGTGG+CGG | + | chr7_4:50573399-50573418 | None:intergenic | 50.0% |
| CAACTGCTACTCTCTCCCAA+TGG | + | chr7_4:50573532-50573551 | None:intergenic | 50.0% | |
| CATTGGGAGAGAGTAGCAGT+TGG | - | chr7_4:50573530-50573549 | Msa1160580:CDS | 50.0% | |
| AGGATGAATGCCAACCAACG+GGG | - | chr7_4:50573721-50573740 | Msa1160580:CDS | 50.0% | |
| ! | GTGGTTGGTGCAGAAGGGAA+AGG | + | chr7_4:50569242-50569261 | None:intergenic | 55.0% |
| ! | GGAATGGTGGTTGGTGCAGA+AGG | + | chr7_4:50569248-50569267 | None:intergenic | 55.0% |
| GTGGTGTCTCCAGAAGCTTC+TGG | - | chr7_4:50569848-50569867 | Msa1160580:CDS | 55.0% | |
| GAGGCCGAGAGGGTTTGTAT+TGG | - | chr7_4:50569940-50569959 | Msa1160580:intron | 55.0% | |
| TTGACAGGGCAGGAGGTGAT+TGG | - | chr7_4:50570380-50570399 | Msa1160580:CDS | 55.0% | |
| CCAAACACGGCGTACAGCAT+CGG | + | chr7_4:50571019-50571038 | None:intergenic | 55.0% | |
| CGATGCTGTACGCCGTGTTT+GGG | - | chr7_4:50571017-50571036 | Msa1160580:intron | 55.0% | |
| !! | ATGGTGGATGACGGAGTCAG+AGG | - | chr7_4:50571752-50571771 | Msa1160580:CDS | 55.0% |
| !! | TGGATGACGGAGTCAGAGGA+TGG | - | chr7_4:50571756-50571775 | Msa1160580:CDS | 55.0% |
| TGACGGAGTCAGAGGATGGA+TGG | - | chr7_4:50571760-50571779 | Msa1160580:CDS | 55.0% | |
| ! | AGAAAGAGGTGGCGGCATAC+AGG | + | chr7_4:50573391-50573410 | None:intergenic | 55.0% |
| GGATGAATGCCAACCAACGG+GGG | - | chr7_4:50573722-50573741 | Msa1160580:CDS | 55.0% | |
| AATGCCAACCAACGGGGGAT+GGG | - | chr7_4:50573727-50573746 | Msa1160580:CDS | 55.0% | |
| ATGTCGGCATCTCTCTCAGC+AGG | + | chr7_4:50573804-50573823 | None:intergenic | 55.0% | |
| TGGTACCTATCGAGGCCGAG+AGG | - | chr7_4:50569929-50569948 | Msa1160580:intron | 60.0% | |
| GGTACCTATCGAGGCCGAGA+GGG | - | chr7_4:50569930-50569949 | Msa1160580:intron | 60.0% | |
| CAAACCCTCTCGGCCTCGAT+AGG | + | chr7_4:50569937-50569956 | None:intergenic | 60.0% | |
| GGCTACCAGTGCTTCCAGAG+TGG | - | chr7_4:50570956-50570975 | Msa1160580:intron | 60.0% | |
| CCGATGCTGTACGCCGTGTT+TGG | - | chr7_4:50571016-50571035 | Msa1160580:intron | 60.0% | |
| ATAGAACCGCGTCAACGGGG+AGG | + | chr7_4:50571802-50571821 | None:intergenic | 60.0% | |
| TTCATGGGTGCGGAAGACGG+TGG | + | chr7_4:50572814-50572833 | None:intergenic | 60.0% | |
| GAATGCCAACCAACGGGGGA+TGG | - | chr7_4:50573726-50573745 | Msa1160580:CDS | 60.0% | |
| TAGACCCATCCCCCGTTGGT+TGG | + | chr7_4:50573734-50573753 | None:intergenic | 60.0% | |
| CCAACGGGGGATGGGTCTAG+CGG | - | chr7_4:50573735-50573754 | Msa1160580:CDS | 65.0% | |
| GGGGGATGGGTCTAGCGGAA+GGG | - | chr7_4:50573740-50573759 | Msa1160580:CDS | 65.0% | |
| GGGGATGGGTCTAGCGGAAG+GGG | - | chr7_4:50573741-50573760 | Msa1160580:CDS | 65.0% | |
| CGAAGGCCTCCCCGTTGACG+CGG | - | chr7_4:50571793-50571812 | Msa1160580:CDS | 70.0% | |
| CCGCTAGACCCATCCCCCGT+TGG | + | chr7_4:50573738-50573757 | None:intergenic | 70.0% | |
| CGGGGGATGGGTCTAGCGGA+AGG | - | chr7_4:50573739-50573758 | Msa1160580:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 50569191 | 50573827 | 50569191 | ID=Msa1160580;Name=Msa1160580 |
| chr7_4 | mRNA | 50569191 | 50573827 | 50569191 | ID=Msa1160580-mRNA-1;Parent=Msa1160580;Name=Msa1160580-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.75|0.33|1|1|1|9|0|900 |
| chr7_4 | exon | 50572827 | 50573827 | 50572827 | ID=Msa1160580-mRNA-1:exon:14135;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50572499 | 50572631 | 50572499 | ID=Msa1160580-mRNA-1:exon:14134;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50571932 | 50572147 | 50571932 | ID=Msa1160580-mRNA-1:exon:14133;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50571648 | 50571845 | 50571648 | ID=Msa1160580-mRNA-1:exon:14132;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50571191 | 50571443 | 50571191 | ID=Msa1160580-mRNA-1:exon:14131;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50570185 | 50570585 | 50570185 | ID=Msa1160580-mRNA-1:exon:14130;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50569754 | 50569870 | 50569754 | ID=Msa1160580-mRNA-1:exon:14129;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50569376 | 50569651 | 50569376 | ID=Msa1160580-mRNA-1:exon:14128;Parent=Msa1160580-mRNA-1 |
| chr7_4 | exon | 50569191 | 50569298 | 50569191 | ID=Msa1160580-mRNA-1:exon:14127;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50572827 | 50573827 | 50572827 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50572499 | 50572631 | 50572499 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50571932 | 50572147 | 50571932 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50571648 | 50571845 | 50571648 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50571191 | 50571443 | 50571191 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50570185 | 50570585 | 50570185 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50569754 | 50569870 | 50569754 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50569376 | 50569651 | 50569376 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| chr7_4 | CDS | 50569191 | 50569298 | 50569191 | ID=Msa1160580-mRNA-1:cds;Parent=Msa1160580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
