Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747730 | sp|Q9SGW3|PSD8A_ARATH | 83.521 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 4.47e-158 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747730 | B7FL82 | 100.000 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005010 | Msa0747730 | 0.997314 | 2.247069e-240 | -8.615850e-47 |
| Msa0053060 | Msa0747730 | 0.886829 | 2.432405e-72 | -8.615850e-47 |
| Msa0639220 | Msa0747730 | -0.810322 | 1.221276e-50 | -8.615850e-47 |
| Msa0747250 | Msa0747730 | 0.828350 | 9.441227e-55 | -8.615850e-47 |
| Msa0747730 | Msa0793230 | 0.813252 | 2.812794e-51 | -8.615850e-47 |
| Msa0747730 | Msa1129880 | -0.804819 | 1.798423e-49 | -8.615850e-47 |
| Msa0747730 | Msa1169660 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
| Msa0747730 | Msa1205270 | -0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa0747730 | Msa1462050 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0180100 | Msa0747730 | -0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa0225070 | Msa0747730 | -0.801969 | 7.005185e-49 | -8.615850e-47 |
| Msa0519070 | Msa0747730 | -0.801994 | 6.922179e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747730 | MtrunA17_Chr1g0151751 | 100.000 | 267 | 0 | 0 | 1 | 267 | 1 | 267 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747730 | AT1G64520.1 | 83.521 | 267 | 44 | 0 | 1 | 267 | 1 | 267 | 4.55e-159 | 442 |
| Msa0747730 | AT5G42040.1 | 62.921 | 267 | 65 | 2 | 1 | 267 | 1 | 233 | 7.24e-113 | 324 |
Find 87 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGAAACTTCTGTGAATT+TGG | 0.038934 | 5_2:+566855 | None:intergenic |
| TGGGATCCATATCGTGATTT+TGG | 0.114449 | 5_2:+566875 | None:intergenic |
| CCGTTCTTGATTTCCCATTC+AGG | 0.264023 | 5_2:+563049 | None:intergenic |
| CACTTGCAGGTGTTACTAAC+AGG | 0.267676 | 5_2:-565641 | Msa0747730:intron |
| GGAGTTGGAGCAATCCTTTA+TGG | 0.271340 | 5_2:-563801 | Msa0747730:CDS |
| TGTGTATTTCATGGATCTTT+TGG | 0.284808 | 5_2:-563723 | Msa0747730:CDS |
| TTCCAAGAGTTCCTGGTCTT+TGG | 0.286082 | 5_2:+563268 | None:intergenic |
| TTAGACAGTATTAGCAATCT+TGG | 0.294273 | 5_2:+562883 | None:intergenic |
| AAATCTCCTTTCCCAGCTTA+AGG | 0.331927 | 5_2:-566779 | Msa0747730:intron |
| GTTAGCTCTTGAACTGCATT+AGG | 0.332972 | 5_2:+565584 | None:intergenic |
| GGAACTCTTGGAATATATTA+AGG | 0.340067 | 5_2:-563258 | Msa0747730:CDS |
| TGCTGAATTCCATACTGAAT+TGG | 0.350776 | 5_2:-563873 | Msa0747730:CDS |
| TGAGAAACTTCTGTGAATTT+GGG | 0.351752 | 5_2:+566856 | None:intergenic |
| CCCTAGCATAACTAAGTGTT+TGG | 0.361635 | 5_2:+562957 | None:intergenic |
| GACTACTATATCGTCAGAAT+TGG | 0.363930 | 5_2:-562721 | Msa0747730:three_prime_UTR |
| TAATATATTCCAAGAGTTCC+TGG | 0.370117 | 5_2:+563261 | None:intergenic |
| TGGGTACTCCTGAGGAGATT+GGG | 0.370608 | 5_2:+563940 | None:intergenic |
| GTGTTTGGTTGATGAGTTGC+AGG | 0.382114 | 5_2:+562972 | None:intergenic |
| TGAATTTCAAATCCATTGTA+AGG | 0.394403 | 5_2:-562690 | Msa0747730:three_prime_UTR |
| TGAGACTTCTTGTGCAGAAT+AGG | 0.396052 | 5_2:-563898 | Msa0747730:CDS |
| CGTTCTTGATTTCCCATTCA+GGG | 0.400779 | 5_2:+563050 | None:intergenic |
| TGAAACATATGTGTATTTCA+TGG | 0.407221 | 5_2:-563732 | Msa0747730:CDS |
| AAAGCAATTCCAATTCAGTA+TGG | 0.408550 | 5_2:+563864 | None:intergenic |
| CAATTCCCAAAATCACGATA+TGG | 0.413083 | 5_2:-566881 | Msa0747730:exon |
| TTGGGTACTCCTGAGGAGAT+TGG | 0.426130 | 5_2:+563939 | None:intergenic |
| CACCAAAGACCAGGAACTCT+TGG | 0.427127 | 5_2:-563270 | Msa0747730:CDS |
| TACCGTGCATCAGTGTAGTA+AGG | 0.430307 | 5_2:+564219 | None:intergenic |
| ATTGCTTTCATCCACTGCTC+TGG | 0.436359 | 5_2:-563849 | Msa0747730:CDS |
| AGAATGGTGGTGCGCAAGGC+TGG | 0.449267 | 5_2:-562599 | Msa0747730:three_prime_UTR |
| GTTGTATGCCCCTTCCATAA+AGG | 0.451259 | 5_2:+563787 | None:intergenic |
| CCTCAGGAGTACCCAATACT+TGG | 0.457349 | 5_2:-563932 | Msa0747730:CDS |
| GAGGATTGTCTGAAAAGAAA+TGG | 0.459740 | 5_2:-562927 | Msa0747730:exon |
| CACTGTAAAGAAGAAAGAAA+AGG | 0.461623 | 5_2:+562769 | None:intergenic |
| ACAGGTTGAGACCAAGTATT+GGG | 0.478577 | 5_2:+563921 | None:intergenic |
| GGTTAGAGTGTACCTTAAGC+TGG | 0.480510 | 5_2:+566767 | None:intergenic |
| TCTGCACAAGAAGTCTCAAC+AGG | 0.487747 | 5_2:+563903 | None:intergenic |
| ACTTAGTTATGCTAGGGAGT+TGG | 0.495838 | 5_2:-562951 | Msa0747730:CDS |
| TATTAAGCATGCCGTGGAGT+TGG | 0.497949 | 5_2:-563816 | Msa0747730:CDS |
| TCACTTCAGAAAATTTAGAA+TGG | 0.498720 | 5_2:-562615 | Msa0747730:three_prime_UTR |
| GATTTCAGGAGCACCCTGAA+TGG | 0.499374 | 5_2:-563063 | Msa0747730:intron |
| AATAAAGCTACTTGTTGAGA+AGG | 0.499709 | 5_2:-566990 | Msa0747730:five_prime_UTR |
| ATTTCAGGAGCACCCTGAAT+GGG | 0.504260 | 5_2:-563062 | Msa0747730:intron |
| GTAAGGTTCATATTCAAATG+AGG | 0.511909 | 5_2:-562673 | Msa0747730:three_prime_UTR |
| TCGTCTTCCCCAATCTCCTC+AGG | 0.513848 | 5_2:-563948 | Msa0747730:CDS |
| AGGGAGGGTATTTCTTTGCA+AGG | 0.516901 | 5_2:+562992 | None:intergenic |
| ACTGTAAAGAAGAAAGAAAA+GGG | 0.520554 | 5_2:+562770 | None:intergenic |
| TTGAAAGAAATCTCTTTCAA+AGG | 0.524033 | 5_2:+564248 | None:intergenic |
| TGGTTGATGAGTTGCAGGGA+GGG | 0.525378 | 5_2:+562977 | None:intergenic |
| GGAGCAATCCTTTATGGAAG+GGG | 0.535947 | 5_2:-563795 | Msa0747730:CDS |
| TTTGAATATGAACCTTACAA+TGG | 0.545098 | 5_2:+562678 | None:intergenic |
| TTGGAGCAATCCTTTATGGA+AGG | 0.551519 | 5_2:-563797 | Msa0747730:CDS |
| TAAGGTTCATATTCAAATGA+GGG | 0.553881 | 5_2:-562672 | Msa0747730:three_prime_UTR |
| ATTAGGTGTATCTGCAAACA+AGG | 0.554484 | 5_2:+565601 | None:intergenic |
| CTTCAGAAAATTTAGAATGG+TGG | 0.557319 | 5_2:-562612 | Msa0747730:three_prime_UTR |
| AACAGGTTGAGACCAAGTAT+TGG | 0.562540 | 5_2:+563920 | None:intergenic |
| ATTTAGAATGGTGGTGCGCA+AGG | 0.564590 | 5_2:-562603 | Msa0747730:three_prime_UTR |
| TGAAGTGATCAAAGAATACA+AGG | 0.573208 | 5_2:+562630 | None:intergenic |
| GTTAGAGTGTACCTTAAGCT+GGG | 0.574520 | 5_2:+566768 | None:intergenic |
| TGGAGCAATCCTTTATGGAA+GGG | 0.575444 | 5_2:-563796 | Msa0747730:CDS |
| ACGTTCAGAGATGAGATAGC+AGG | 0.577525 | 5_2:-563353 | Msa0747730:intron |
| CTGAAAAGAAATGGATGCAA+TGG | 0.579849 | 5_2:-562918 | Msa0747730:exon |
| GATAGCAGGATGCAGTGAGA+AGG | 0.587670 | 5_2:-563339 | Msa0747730:CDS |
| CCAAACACTTAGTTATGCTA+GGG | 0.588753 | 5_2:-562957 | Msa0747730:CDS |
| TATCTGCAAACAAGGGTGGA+AGG | 0.590332 | 5_2:+565609 | None:intergenic |
| GGGTACTCCTGAGGAGATTG+GGG | 0.592535 | 5_2:+563941 | None:intergenic |
| ACCAAACACTTAGTTATGCT+AGG | 0.593116 | 5_2:-562958 | Msa0747730:CDS |
| TCCACGGCATGCTTAATACA+AGG | 0.594862 | 5_2:+563821 | None:intergenic |
| TTGGTTGATGAGTTGCAGGG+AGG | 0.604694 | 5_2:+562976 | None:intergenic |
| AGTGTACCTTAAGCTGGGAA+AGG | 0.604789 | 5_2:+566773 | None:intergenic |
| TGTTTGGTTGATGAGTTGCA+GGG | 0.615391 | 5_2:+562973 | None:intergenic |
| GGTGTATCTGCAAACAAGGG+TGG | 0.618117 | 5_2:+565605 | None:intergenic |
| ACAAGGATTCTCCAGAGCAG+TGG | 0.619513 | 5_2:+563838 | None:intergenic |
| AAAGGATTGCTCCAACTCCA+CGG | 0.630188 | 5_2:+563805 | None:intergenic |
| GTTATGCTAGGGAGTTGGAG+AGG | 0.631284 | 5_2:-562946 | Msa0747730:CDS |
| ACTTGCAGGTGTTACTAACA+GGG | 0.633305 | 5_2:-565640 | Msa0747730:intron |
| AACCTTACTACACTGATGCA+CGG | 0.640807 | 5_2:-564221 | Msa0747730:intron |
| TCTGTCGAGCACTCAAGACA+CGG | 0.643446 | 5_2:+563765 | None:intergenic |
| TCCTTGTATTAAGCATGCCG+TGG | 0.644930 | 5_2:-563822 | Msa0747730:CDS |
| TGTTTAGTTCTGATTCAGTG+TGG | 0.645308 | 5_2:-562854 | Msa0747730:three_prime_UTR |
| CCAAGTATTGGGTACTCCTG+AGG | 0.648239 | 5_2:+563932 | None:intergenic |
| GTTGCTGTTCACCAAAGACC+AGG | 0.651601 | 5_2:-563279 | Msa0747730:CDS |
| AAATACACATATGTTTCATG+TGG | 0.652663 | 5_2:+563737 | None:intergenic |
| ACTCTTGGAATATATTAAGG+AGG | 0.657443 | 5_2:-563255 | Msa0747730:intron |
| CCTGAATGGGAAATCAAGAA+CGG | 0.657945 | 5_2:-563049 | Msa0747730:CDS |
| CTGGGAAAGGAGATTTGAAG+CGG | 0.672348 | 5_2:+566786 | None:intergenic |
| AGAAAGAAAAGGGTACACAA+AGG | 0.698861 | 5_2:+562780 | None:intergenic |
| TTAGGTGTATCTGCAAACAA+GGG | 0.724231 | 5_2:+565602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTAAAAAAAAAAATA+CGG | + | chr5_2:564186-564205 | None:intergenic | 0.0% |
| !!! | TAAATTAATTATGTCAATTT+TGG | - | chr5_2:562936-562955 | Msa0747730:exon | 10.0% |
| !!! | AAATTAATTATGTCAATTTT+GGG | - | chr5_2:562937-562956 | Msa0747730:CDS | 10.0% |
| !! | ATTTGTATAAAAAAATTAAG+AGG | - | chr5_2:563000-563019 | Msa0747730:CDS | 10.0% |
| !! | TTTGTATAAAAAAATTAAGA+GGG | - | chr5_2:563001-563020 | Msa0747730:CDS | 10.0% |
| !!! | ATAGTTTTTATTTCTAAAAT+TGG | - | chr5_2:564471-564490 | Msa0747730:intron | 10.0% |
| !! | TATATGTATATTACTAAAAT+AGG | + | chr5_2:564696-564715 | None:intergenic | 10.0% |
| !!! | TTTATTTTGTATAATTGATA+TGG | + | chr5_2:565145-565164 | None:intergenic | 10.0% |
| !! | AAGTAAAAAAAATAAATAGA+TGG | + | chr5_2:565996-566015 | None:intergenic | 10.0% |
| !! | TTGTATAAAAAAATTAAGAG+GGG | - | chr5_2:563002-563021 | Msa0747730:CDS | 15.0% |
| !!! | CTAAAATATGTTTCTTTTAT+AGG | + | chr5_2:563228-563247 | None:intergenic | 15.0% |
| !!! | CACTAAAATCTTTTATTTTT+AGG | + | chr5_2:563465-563484 | None:intergenic | 15.0% |
| !!! | CTAAAAATAAAAGATTTTAG+TGG | - | chr5_2:563463-563482 | Msa0747730:intron | 15.0% |
| !!! | TATTGTAAATGACATTTTAA+TGG | - | chr5_2:564255-564274 | Msa0747730:CDS | 15.0% |
| !! | ATTACTAATAACACAAAATA+CGG | + | chr5_2:564628-564647 | None:intergenic | 15.0% |
| !!! | TAACATAATTGATTTATGTT+TGG | + | chr5_2:564785-564804 | None:intergenic | 15.0% |
| !! | AATTATTTCATAATCAATTC+TGG | - | chr5_2:564841-564860 | Msa0747730:intron | 15.0% |
| !! | AGTGAATCTTAAATTAAATT+AGG | - | chr5_2:564905-564924 | Msa0747730:intron | 15.0% |
| !! | AATCTTAAATTAAATTAGGT+TGG | - | chr5_2:564909-564928 | Msa0747730:intron | 15.0% |
| !!! | AAGAGTTTTTATACTAAAAT+TGG | - | chr5_2:565070-565089 | Msa0747730:intron | 15.0% |
| !!! | AAAAGAAACATATTTTAGAG+AGG | - | chr5_2:563230-563249 | Msa0747730:intron | 20.0% |
| !! | TTAATAAACTCAGTTATTGT+AGG | - | chr5_2:563807-563826 | Msa0747730:CDS | 20.0% |
| !! | TAATAAACTCAGTTATTGTA+GGG | - | chr5_2:563808-563827 | Msa0747730:CDS | 20.0% |
| !! | TTATGGAAAACTAAATGATA+AGG | + | chr5_2:563836-563855 | None:intergenic | 20.0% |
| !! | AAATTCTCGACAAATAATTA+TGG | + | chr5_2:563853-563872 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAGTAAAAATAC+AGG | + | chr5_2:564137-564156 | None:intergenic | 20.0% |
| !! | ATATGAGTGAATCTTAAATT+AGG | - | chr5_2:564229-564248 | Msa0747730:CDS | 20.0% |
| !! | TGTGTTAATTTATGATGTTT+GGG | + | chr5_2:564741-564760 | None:intergenic | 20.0% |
| !! | TTGTGTTAATTTATGATGTT+TGG | + | chr5_2:564742-564761 | None:intergenic | 20.0% |
| !!! | GATAGATAAATTTTTCTATC+TGG | - | chr5_2:564974-564993 | Msa0747730:intron | 20.0% |
| !! | TGTATAATTGATATGGAAAA+TGG | + | chr5_2:565138-565157 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTACTTCTGAAGT+TGG | - | chr5_2:566003-566022 | Msa0747730:intron | 20.0% |
| !! | AGATATACTAATTATAGAAC+CGG | + | chr5_2:566523-566542 | None:intergenic | 20.0% |
| ! | ATAACCTAATGACCTAAATA+AGG | - | chr5_2:563114-563133 | Msa0747730:intron | 25.0% |
| ! | GATATTCTTGTGAAGTAAAA+TGG | - | chr5_2:563273-563292 | Msa0747730:CDS | 25.0% |
| !! | TGAATATAATTGCGCATTTT+GGG | - | chr5_2:563322-563341 | Msa0747730:CDS | 25.0% |
| !!! | AAATAAAAGATTTTAGTGGC+AGG | - | chr5_2:563467-563486 | Msa0747730:intron | 25.0% |
| !! | TCTTGATACTTGTTAGTTAT+TGG | - | chr5_2:563570-563589 | Msa0747730:intron | 25.0% |
| !! | CTTGATACTTGTTAGTTATT+GGG | - | chr5_2:563571-563590 | Msa0747730:intron | 25.0% |
| ! | TTAAAATAGTACCTAATTGC+TGG | - | chr5_2:563894-563913 | Msa0747730:CDS | 25.0% |
| ! | TCATATGATATTTGATAAGG+TGG | + | chr5_2:564215-564234 | None:intergenic | 25.0% |
| ! | CACTCATATGATATTTGATA+AGG | + | chr5_2:564218-564237 | None:intergenic | 25.0% |
| !!! | AAATTAAATTAGGTTGGAAG+AGG | - | chr5_2:564915-564934 | Msa0747730:intron | 25.0% |
| !!! | TGACAAATACTGTATTTTAG+AGG | - | chr5_2:565035-565054 | Msa0747730:intron | 25.0% |
| ! | AATTAATATGATCGAGTCAT+GGG | + | chr5_2:565184-565203 | None:intergenic | 25.0% |
| ! | TAATTAATATGATCGAGTCA+TGG | + | chr5_2:565185-565204 | None:intergenic | 25.0% |
| !! | TCTTCTTGTTGAAAATTTTC+AGG | - | chr5_2:565285-565304 | Msa0747730:intron | 25.0% |
| !! | CTTCTTGTTGAAAATTTTCA+GGG | - | chr5_2:565286-565305 | Msa0747730:intron | 25.0% |
| !! | TTCTTGTTGAAAATTTTCAG+GGG | - | chr5_2:565287-565306 | Msa0747730:intron | 25.0% |
| !! | AATTTTTACACTAAGGACAA+CGG | + | chr5_2:565328-565347 | None:intergenic | 25.0% |
| ! | TTGAAAGAAATCTCTTTCAA+AGG | + | chr5_2:565364-565383 | None:intergenic | 25.0% |
| !! | ATTGTGTACTTGTTAACAAA+GGG | + | chr5_2:565428-565447 | None:intergenic | 25.0% |
| !! | TATTGTGTACTTGTTAACAA+AGG | + | chr5_2:565429-565448 | None:intergenic | 25.0% |
| ! | CTACAAGGTAATATACTATA+AGG | + | chr5_2:565522-565541 | None:intergenic | 25.0% |
| ! | TGTTGAGCTATTGTAATTTA+TGG | - | chr5_2:565615-565634 | Msa0747730:CDS | 25.0% |
| ! | AAATACACATATGTTTCATG+TGG | + | chr5_2:565875-565894 | None:intergenic | 25.0% |
| ! | TGAAACATATGTGTATTTCA+TGG | - | chr5_2:565877-565896 | Msa0747730:intron | 25.0% |
| ! | ATTGAACTCAACTGTTAAAT+TGG | - | chr5_2:565966-565985 | Msa0747730:intron | 25.0% |
| ! | TTATAATAATGGTTGTGCTT+CGG | + | chr5_2:566151-566170 | None:intergenic | 25.0% |
| !!! | TTAGTATATCTACTGATTTC+AGG | - | chr5_2:566532-566551 | Msa0747730:intron | 25.0% |
| !!! | TCTCTTTATTTTGTTCATCT+AGG | - | chr5_2:566794-566813 | Msa0747730:CDS | 25.0% |
| ! | ACTGTAAAGAAGAAAGAAAA+GGG | + | chr5_2:566842-566861 | None:intergenic | 25.0% |
| ! | TGAATTTCAAATCCATTGTA+AGG | - | chr5_2:566919-566938 | Msa0747730:five_prime_UTR | 25.0% |
| ! | TTTGAATATGAACCTTACAA+TGG | + | chr5_2:566934-566953 | None:intergenic | 25.0% |
| ! | TAAGGTTCATATTCAAATGA+GGG | - | chr5_2:566937-566956 | Msa0747730:five_prime_UTR | 25.0% |
| ! | TCACTTCAGAAAATTTAGAA+TGG | - | chr5_2:566994-567013 | Msa0747730:five_prime_UTR | 25.0% |
| ! | AATAAAGCTACTTGTTGAGA+AGG | - | chr5_2:562619-562638 | Msa0747730:three_prime_UTR | 30.0% |
| TGAGAAACTTCTGTGAATTT+GGG | + | chr5_2:562756-562775 | None:intergenic | 30.0% | |
| AAAGAAACTAGGGTTTAGTA+GGG | + | chr5_2:562866-562885 | None:intergenic | 30.0% | |
| ! | AACACACAGCATTGAAATTA+GGG | + | chr5_2:562893-562912 | None:intergenic | 30.0% |
| CTAATGACCTAAATAAGGAA+CGG | - | chr5_2:563119-563138 | Msa0747730:intron | 30.0% | |
| !! | CATTTTTCCGTTCCTTATTT+AGG | + | chr5_2:563129-563148 | None:intergenic | 30.0% |
| !! | TAAGATGGTTTTTCAGAAAC+TGG | - | chr5_2:563149-563168 | Msa0747730:intron | 30.0% |
| !! | AAGATGGTTTTTCAGAAACT+GGG | - | chr5_2:563150-563169 | Msa0747730:intron | 30.0% |
| TTGTGAAGTAAAATGGTTGT+GGG | - | chr5_2:563280-563299 | Msa0747730:CDS | 30.0% | |
| ! | GTGAATATAATTGCGCATTT+TGG | - | chr5_2:563321-563340 | Msa0747730:CDS | 30.0% |
| TTTCTCACAAACACTTATGT+GGG | + | chr5_2:563368-563387 | None:intergenic | 30.0% | |
| ACATAAGTGTTTGTGAGAAA+CGG | - | chr5_2:563368-563387 | Msa0747730:intron | 30.0% | |
| TTCCTTTCTATTGGGTATTA+GGG | + | chr5_2:563527-563546 | None:intergenic | 30.0% | |
| TTTCCTTTCTATTGGGTATT+AGG | + | chr5_2:563528-563547 | None:intergenic | 30.0% | |
| GCAATAGTTTCCTTTCTATT+GGG | + | chr5_2:563535-563554 | None:intergenic | 30.0% | |
| AGCAATAGTTTCCTTTCTAT+TGG | + | chr5_2:563536-563555 | None:intergenic | 30.0% | |
| TTGTTAGTTATTGGGCTTAT+AGG | - | chr5_2:563579-563598 | Msa0747730:intron | 30.0% | |
| AAACTTTGTCTAACCGTTTA+AGG | + | chr5_2:563733-563752 | None:intergenic | 30.0% | |
| TTTAAAGACTATAGCCAGTT+TGG | + | chr5_2:563879-563898 | None:intergenic | 30.0% | |
| ! | TTCTCAATGTGACTTTTTAG+TGG | - | chr5_2:563938-563957 | Msa0747730:CDS | 30.0% |
| TTCATTCCATTCAGTTTCTA+TGG | - | chr5_2:564065-564084 | Msa0747730:intron | 30.0% | |
| AAAACACCATAGAAACTGAA+TGG | + | chr5_2:564074-564093 | None:intergenic | 30.0% | |
| !!! | GACATTTTAATGGATTATCC+TGG | - | chr5_2:564265-564284 | Msa0747730:CDS | 30.0% |
| AGATAGATAACTGTTCTATC+TGG | - | chr5_2:564499-564518 | Msa0747730:intron | 30.0% | |
| ATCTATCTTTCTTACTACCA+TGG | + | chr5_2:564961-564980 | None:intergenic | 30.0% | |
| TAAGATAATAACTGCTTGTC+AGG | - | chr5_2:565212-565231 | Msa0747730:intron | 30.0% | |
| TGTCCTTAGTGTAAAAATTG+AGG | - | chr5_2:565329-565348 | Msa0747730:intron | 30.0% | |
| ! | GATCCTCAATTTTTACACTA+AGG | + | chr5_2:565335-565354 | None:intergenic | 30.0% |
| ! | TTGTGTACTTGTTAACAAAG+GGG | + | chr5_2:565427-565446 | None:intergenic | 30.0% |
| !!! | CATGTCTATTGTTTTAGATC+CGG | + | chr5_2:565479-565498 | None:intergenic | 30.0% |
| GTTTCTTGGTATATACTACA+AGG | + | chr5_2:565537-565556 | None:intergenic | 30.0% | |
| GATAATACTTTCACGTTTCT+TGG | + | chr5_2:565551-565570 | None:intergenic | 30.0% | |
| CAAGAAAGCAAATAATGAGT+TGG | + | chr5_2:565597-565616 | None:intergenic | 30.0% | |
| AAAGCAATTCCAATTCAGTA+TGG | + | chr5_2:565748-565767 | None:intergenic | 30.0% | |
| ! | TGTGTATTTCATGGATCTTT+TGG | - | chr5_2:565886-565905 | Msa0747730:intron | 30.0% |
| TGACAACAATTATTACCTGA+TGG | + | chr5_2:565918-565937 | None:intergenic | 30.0% | |
| ! | TGTTAGAGAAATTAGTTTCG+AGG | + | chr5_2:566056-566075 | None:intergenic | 30.0% |
| TAGTTCCTGCAATGAAAATT+TGG | - | chr5_2:566125-566144 | Msa0747730:intron | 30.0% | |
| GAGCTTCAAGGTTATAATAA+TGG | + | chr5_2:566162-566181 | None:intergenic | 30.0% | |
| GGAAAAACAATATACAACAG+AGG | + | chr5_2:566190-566209 | None:intergenic | 30.0% | |
| AACTAGTTAGCAAATTGACA+TGG | + | chr5_2:566225-566244 | None:intergenic | 30.0% | |
| TAATATATTCCAAGAGTTCC+TGG | + | chr5_2:566351-566370 | None:intergenic | 30.0% | |
| GGAACTCTTGGAATATATTA+AGG | - | chr5_2:566351-566370 | Msa0747730:intron | 30.0% | |
| ACTCTTGGAATATATTAAGG+AGG | - | chr5_2:566354-566373 | Msa0747730:intron | 30.0% | |
| ! | TGTCTATTTTCAAAAGGCAA+AGG | - | chr5_2:566586-566605 | Msa0747730:intron | 30.0% |
| TTAGACAGTATTAGCAATCT+TGG | + | chr5_2:566729-566748 | None:intergenic | 30.0% | |
| CACTGTAAAGAAGAAAGAAA+AGG | + | chr5_2:566843-566862 | None:intergenic | 30.0% | |
| GTAAGGTTCATATTCAAATG+AGG | - | chr5_2:566936-566955 | Msa0747730:five_prime_UTR | 30.0% | |
| TGAAGTGATCAAAGAATACA+AGG | + | chr5_2:566982-567001 | None:intergenic | 30.0% | |
| ! | CTTCAGAAAATTTAGAATGG+TGG | - | chr5_2:566997-567016 | Msa0747730:five_prime_UTR | 30.0% |
| !! | TATCGTGATTTTGGGAATTG+CGG | + | chr5_2:562728-562747 | None:intergenic | 35.0% |
| CAATTCCCAAAATCACGATA+TGG | - | chr5_2:562728-562747 | Msa0747730:three_prime_UTR | 35.0% | |
| CTGAGAAACTTCTGTGAATT+TGG | + | chr5_2:562757-562776 | None:intergenic | 35.0% | |
| GAAAGAAACTAGGGTTTAGT+AGG | + | chr5_2:562867-562886 | None:intergenic | 35.0% | |
| TTAGGGTAGGAAAGAAACTA+GGG | + | chr5_2:562876-562895 | None:intergenic | 35.0% | |
| ATTAGGGTAGGAAAGAAACT+AGG | + | chr5_2:562877-562896 | None:intergenic | 35.0% | |
| ! | CAACACACAGCATTGAAATT+AGG | + | chr5_2:562894-562913 | None:intergenic | 35.0% |
| TTAAGAGGGGTTGTTAGAAA+CGG | - | chr5_2:563015-563034 | Msa0747730:CDS | 35.0% | |
| ! | AACGGTGTTTTACTCTTGAT+TGG | - | chr5_2:563033-563052 | Msa0747730:CDS | 35.0% |
| ! | CGTTCCTTATTTAGGTCATT+AGG | + | chr5_2:563121-563140 | None:intergenic | 35.0% |
| AGGAACGGAAAAATGTAAGA+TGG | - | chr5_2:563134-563153 | Msa0747730:intron | 35.0% | |
| AAACTGGGTTTACTCTTGAT+TGG | - | chr5_2:563165-563184 | Msa0747730:intron | 35.0% | |
| CTTGTGAAGTAAAATGGTTG+TGG | - | chr5_2:563279-563298 | Msa0747730:CDS | 35.0% | |
| GTTTCTCACAAACACTTATG+TGG | + | chr5_2:563369-563388 | None:intergenic | 35.0% | |
| CATAAGTGTTTGTGAGAAAC+GGG | - | chr5_2:563369-563388 | Msa0747730:intron | 35.0% | |
| ATAAGTGTTTGTGAGAAACG+GGG | - | chr5_2:563370-563389 | Msa0747730:intron | 35.0% | |
| AACCCTAATACCCAATAGAA+AGG | - | chr5_2:563522-563541 | Msa0747730:intron | 35.0% | |
| CTAGAAGCTAAATCCTAACT+GGG | + | chr5_2:563648-563667 | None:intergenic | 35.0% | |
| !! | AGGATTTAGCTTCTAGCTTA+TGG | - | chr5_2:563652-563671 | Msa0747730:intron | 35.0% |
| !! | GGATTTAGCTTCTAGCTTAT+GGG | - | chr5_2:563653-563672 | Msa0747730:intron | 35.0% |
| TGATTCTTTGCCTATGAGAA+AGG | - | chr5_2:563707-563726 | Msa0747730:intron | 35.0% | |
| AGAAAGAATCACCAGCAATT+AGG | + | chr5_2:563908-563927 | None:intergenic | 35.0% | |
| TTAGGTGTATCTGCAAACAA+GGG | + | chr5_2:564010-564029 | None:intergenic | 35.0% | |
| ATTAGGTGTATCTGCAAACA+AGG | + | chr5_2:564011-564030 | None:intergenic | 35.0% | |
| !! | CATGCTTTGAAGAACAAAAC+AGG | + | chr5_2:564358-564377 | None:intergenic | 35.0% |
| !! | CTGTTTTGTTCTTCAAAGCA+TGG | - | chr5_2:564356-564375 | Msa0747730:intron | 35.0% |
| ! | TAACCTTTCTGTCTGGTTTA+AGG | - | chr5_2:564391-564410 | Msa0747730:intron | 35.0% |
| GGAGAATGAACAAAGAGAAA+GGG | + | chr5_2:564589-564608 | None:intergenic | 35.0% | |
| AGGAGAATGAACAAAGAGAA+AGG | + | chr5_2:564590-564609 | None:intergenic | 35.0% | |
| !! | TACGGATTAGAAAACAATGC+AGG | + | chr5_2:564610-564629 | None:intergenic | 35.0% |
| ! | TGGGTAGTTTGCATCAAAAT+TGG | + | chr5_2:564722-564741 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTCCTCAAACCA+TGG | - | chr5_2:564941-564960 | Msa0747730:intron | 35.0% |
| TTTCTTACTACCATGGTTTG+AGG | + | chr5_2:564954-564973 | None:intergenic | 35.0% | |
| TAATCTCAGACTGTTGAATC+CGG | - | chr5_2:565457-565476 | Msa0747730:intron | 35.0% | |
| AAGGCAATAGTTAAGTGATC+AGG | + | chr5_2:565503-565522 | None:intergenic | 35.0% | |
| TGCTGAATTCCATACTGAAT+TGG | - | chr5_2:565736-565755 | Msa0747730:intron | 35.0% | |
| AACAGTTGAGTTCAATCATC+AGG | + | chr5_2:565962-565981 | None:intergenic | 35.0% | |
| !! | TTTACTTCTGAAGTTGGACT+TGG | - | chr5_2:566009-566028 | Msa0747730:intron | 35.0% |
| TTGACATGGATGTGCAAATA+TGG | + | chr5_2:566211-566230 | None:intergenic | 35.0% | |
| GGCTTATCAAGTAAAAGCAA+AGG | + | chr5_2:566469-566488 | None:intergenic | 35.0% | |
| ! | CGGTTCTGTCTATTTTCAAA+AGG | - | chr5_2:566580-566599 | Msa0747730:intron | 35.0% |
| ACCAAACACTTAGTTATGCT+AGG | - | chr5_2:566651-566670 | Msa0747730:intron | 35.0% | |
| CCAAACACTTAGTTATGCTA+GGG | - | chr5_2:566652-566671 | Msa0747730:intron | 35.0% | |
| GAGGATTGTCTGAAAAGAAA+TGG | - | chr5_2:566682-566701 | Msa0747730:intron | 35.0% | |
| CTGAAAAGAAATGGATGCAA+TGG | - | chr5_2:566691-566710 | Msa0747730:intron | 35.0% | |
| !! | TGTTTAGTTCTGATTCAGTG+TGG | - | chr5_2:566755-566774 | Msa0747730:intron | 35.0% |
| ! | AGAAAGAAAAGGGTACACAA+AGG | + | chr5_2:566832-566851 | None:intergenic | 35.0% |
| GACTACTATATCGTCAGAAT+TGG | - | chr5_2:566888-566907 | Msa0747730:five_prime_UTR | 35.0% | |
| ! | TTGGGAATTGCGGTTTTCAA+AGG | + | chr5_2:562718-562737 | None:intergenic | 40.0% |
| ! | GGGATCCATATCGTGATTTT+GGG | + | chr5_2:562736-562755 | None:intergenic | 40.0% |
| ! | TGGGATCCATATCGTGATTT+TGG | + | chr5_2:562737-562756 | None:intergenic | 40.0% |
| AAATCTCCTTTCCCAGCTTA+AGG | - | chr5_2:562830-562849 | Msa0747730:three_prime_UTR | 40.0% | |
| GTTAGAGTGTACCTTAAGCT+GGG | + | chr5_2:562844-562863 | None:intergenic | 40.0% | |
| ! | CACAGCATTGAAATTAGGGT+AGG | + | chr5_2:562889-562908 | None:intergenic | 40.0% |
| !! | CTCTTGATTGGTTGTTTCTG+TGG | - | chr5_2:563177-563196 | Msa0747730:intron | 40.0% |
| TAAGTGTTTGTGAGAAACGG+GGG | - | chr5_2:563371-563390 | Msa0747730:intron | 40.0% | |
| !! | AGATTTTAGTGGCAGGTTGT+TGG | - | chr5_2:563474-563493 | Msa0747730:intron | 40.0% |
| !! | GATTTTAGTGGCAGGTTGTT+GGG | - | chr5_2:563475-563494 | Msa0747730:intron | 40.0% |
| TGGTTTATACTGACCCAGTT+AGG | - | chr5_2:563632-563651 | Msa0747730:intron | 40.0% | |
| GCTAGAAGCTAAATCCTAAC+TGG | + | chr5_2:563649-563668 | None:intergenic | 40.0% | |
| CCTATGAGAAAGGCCTTAAA+CGG | - | chr5_2:563717-563736 | Msa0747730:CDS | 40.0% | |
| ! | GTCGAGAATTTTGTCCAAAC+TGG | - | chr5_2:563862-563881 | Msa0747730:CDS | 40.0% |
| ! | TAGTGGCATTTTTCACTTGC+AGG | - | chr5_2:563955-563974 | Msa0747730:intron | 40.0% |
| !! | ACTTGCAGGTGTTACTAACA+GGG | - | chr5_2:563969-563988 | Msa0747730:intron | 40.0% |
| ! | GTTAGCTCTTGAACTGCATT+AGG | + | chr5_2:564028-564047 | None:intergenic | 40.0% |
| TACAGGTAAGAAAACAACGC+AGG | + | chr5_2:564120-564139 | None:intergenic | 40.0% | |
| TACGGGTAAGAAAACAATGC+AGG | + | chr5_2:564168-564187 | None:intergenic | 40.0% | |
| GGATAGATAACCTTTCTGTC+TGG | - | chr5_2:564384-564403 | Msa0747730:intron | 40.0% | |
| TTCATTCCAATCAGTTGCTC+TGG | - | chr5_2:564556-564575 | Msa0747730:intron | 40.0% | |
| AAAAGACCAGAGCAACTGAT+TGG | + | chr5_2:564565-564584 | None:intergenic | 40.0% | |
| !! | GAAGTGTGTGTTTAGTTCTG+CGG | + | chr5_2:564870-564889 | None:intergenic | 40.0% |
| TTTGTCATGCAGCAAGACAA+AGG | + | chr5_2:565022-565041 | None:intergenic | 40.0% | |
| TAACTGCTTGTCAGGTGAAT+AGG | - | chr5_2:565220-565239 | Msa0747730:intron | 40.0% | |
| AACCTTACTACACTGATGCA+CGG | - | chr5_2:565388-565407 | Msa0747730:intron | 40.0% | |
| ! | ACAGGTTGAGACCAAGTATT+GGG | + | chr5_2:565691-565710 | None:intergenic | 40.0% |
| ! | AACAGGTTGAGACCAAGTAT+TGG | + | chr5_2:565692-565711 | None:intergenic | 40.0% |
| TGAGACTTCTTGTGCAGAAT+AGG | - | chr5_2:565711-565730 | Msa0747730:intron | 40.0% | |
| TTGGAGCAATCCTTTATGGA+AGG | - | chr5_2:565812-565831 | Msa0747730:intron | 40.0% | |
| TGGAGCAATCCTTTATGGAA+GGG | - | chr5_2:565813-565832 | Msa0747730:intron | 40.0% | |
| ! | ATCTTTTGGCAAAGACCATC+AGG | - | chr5_2:565900-565919 | Msa0747730:intron | 40.0% |
| AGTTCAATCATCAGGTAGGT+AGG | + | chr5_2:565954-565973 | None:intergenic | 40.0% | |
| GTTGAGTTCAATCATCAGGT+AGG | + | chr5_2:565958-565977 | None:intergenic | 40.0% | |
| ! | TTCGGCCAAATTTTCATTGC+AGG | + | chr5_2:566133-566152 | None:intergenic | 40.0% |
| AATGTCGTGCAAAGAGATTC+AGG | + | chr5_2:566490-566509 | None:intergenic | 40.0% | |
| !! | CACGACATTGTTTTGTTCTC+CGG | - | chr5_2:566501-566520 | Msa0747730:intron | 40.0% |
| CGTTCTTGATTTCCCATTCA+GGG | + | chr5_2:566562-566581 | None:intergenic | 40.0% | |
| CCTGAATGGGAAATCAAGAA+CGG | - | chr5_2:566560-566579 | Msa0747730:intron | 40.0% | |
| !! | TGTTTGGTTGATGAGTTGCA+GGG | + | chr5_2:566639-566658 | None:intergenic | 40.0% |
| CCCTAGCATAACTAAGTGTT+TGG | + | chr5_2:566655-566674 | None:intergenic | 40.0% | |
| ACTTAGTTATGCTAGGGAGT+TGG | - | chr5_2:566658-566677 | Msa0747730:intron | 40.0% | |
| CTGGGAAAGGAGATTTGAAG+CGG | + | chr5_2:562826-562845 | None:intergenic | 45.0% | |
| AGTGTACCTTAAGCTGGGAA+AGG | + | chr5_2:562839-562858 | None:intergenic | 45.0% | |
| GGTTAGAGTGTACCTTAAGC+TGG | + | chr5_2:562845-562864 | None:intergenic | 45.0% | |
| AACGGGGGTTTACTCTTGAT+TGG | - | chr5_2:563386-563405 | Msa0747730:intron | 45.0% | |
| AGGTTGTTGGGTGGCAATTT+GGG | - | chr5_2:563487-563506 | Msa0747730:intron | 45.0% | |
| GCAGCTTGAATTCATAGCTC+TGG | - | chr5_2:563612-563631 | Msa0747730:intron | 45.0% | |
| ! | CCGTTTAAGGCCTTTCTCAT+AGG | + | chr5_2:563720-563739 | None:intergenic | 45.0% |
| !! | CACTTGCAGGTGTTACTAAC+AGG | - | chr5_2:563968-563987 | Msa0747730:intron | 45.0% |
| TATCTGCAAACAAGGGTGGA+AGG | + | chr5_2:564003-564022 | None:intergenic | 45.0% | |
| ATCACAAAGAGCTCATAGCC+AGG | + | chr5_2:564286-564305 | None:intergenic | 45.0% | |
| GATCCACTTCCAACTATGAC+AGG | + | chr5_2:564336-564355 | None:intergenic | 45.0% | |
| GTTCTTCAAAGCATGGCAGT+AGG | - | chr5_2:564363-564382 | Msa0747730:intron | 45.0% | |
| CCACCTTAAACCAGACAGAA+AGG | + | chr5_2:564397-564416 | None:intergenic | 45.0% | |
| ! | CCTTTCTGTCTGGTTTAAGG+TGG | - | chr5_2:564394-564413 | Msa0747730:intron | 45.0% |
| ACTGTTCTATCTGGTTGTGC+TGG | - | chr5_2:564508-564527 | Msa0747730:intron | 45.0% | |
| TACCGTGCATCAGTGTAGTA+AGG | + | chr5_2:565393-565412 | None:intergenic | 45.0% | |
| TCTGCACAAGAAGTCTCAAC+AGG | + | chr5_2:565709-565728 | None:intergenic | 45.0% | |
| ATTGCTTTCATCCACTGCTC+TGG | - | chr5_2:565760-565779 | Msa0747730:intron | 45.0% | |
| TCCTTGTATTAAGCATGCCG+TGG | - | chr5_2:565787-565806 | Msa0747730:intron | 45.0% | |
| TCCACGGCATGCTTAATACA+AGG | + | chr5_2:565791-565810 | None:intergenic | 45.0% | |
| TATTAAGCATGCCGTGGAGT+TGG | - | chr5_2:565793-565812 | Msa0747730:intron | 45.0% | |
| AAAGGATTGCTCCAACTCCA+CGG | + | chr5_2:565807-565826 | None:intergenic | 45.0% | |
| GGAGTTGGAGCAATCCTTTA+TGG | - | chr5_2:565808-565827 | Msa0747730:intron | 45.0% | |
| GGAGCAATCCTTTATGGAAG+GGG | - | chr5_2:565814-565833 | Msa0747730:intron | 45.0% | |
| GTTGTATGCCCCTTCCATAA+AGG | + | chr5_2:565825-565844 | None:intergenic | 45.0% | |
| ACGTTCAGAGATGAGATAGC+AGG | - | chr5_2:566256-566275 | Msa0747730:intron | 45.0% | |
| ! | TTCCAAGAGTTCCTGGTCTT+TGG | + | chr5_2:566344-566363 | None:intergenic | 45.0% |
| !! | ATTTCAGGAGCACCCTGAAT+GGG | - | chr5_2:566547-566566 | Msa0747730:intron | 45.0% |
| CCGTTCTTGATTTCCCATTC+AGG | + | chr5_2:566563-566582 | None:intergenic | 45.0% | |
| !! | AGGGAGGGTATTTCTTTGCA+AGG | + | chr5_2:566620-566639 | None:intergenic | 45.0% |
| !! | GTGTTTGGTTGATGAGTTGC+AGG | + | chr5_2:566640-566659 | None:intergenic | 45.0% |
| ! | ATTTAGAATGGTGGTGCGCA+AGG | - | chr5_2:567006-567025 | Msa0747730:five_prime_UTR | 45.0% |
| !! | TTTATTAAAAAAAAAAATAC+GGG | + | chr5_2:564185-564204 | None:intergenic | 5.0% |
| TTTAGTGGCAGGTTGTTGGG+TGG | - | chr5_2:563478-563497 | Msa0747730:intron | 50.0% | |
| CAGGTTGTTGGGTGGCAATT+TGG | - | chr5_2:563486-563505 | Msa0747730:intron | 50.0% | |
| GGTGTATCTGCAAACAAGGG+TGG | + | chr5_2:564007-564026 | None:intergenic | 50.0% | |
| TCCACACCTCCTGTCATAGT+TGG | - | chr5_2:564324-564343 | Msa0747730:intron | 50.0% | |
| TCCAACTATGACAGGAGGTG+TGG | + | chr5_2:564328-564347 | None:intergenic | 50.0% | |
| CCACTTCCAACTATGACAGG+AGG | + | chr5_2:564333-564352 | None:intergenic | 50.0% | |
| CCTCCTGTCATAGTTGGAAG+TGG | - | chr5_2:564330-564349 | Msa0747730:intron | 50.0% | |
| TGGGTACTCCTGAGGAGATT+GGG | + | chr5_2:565672-565691 | None:intergenic | 50.0% | |
| TTGGGTACTCCTGAGGAGAT+TGG | + | chr5_2:565673-565692 | None:intergenic | 50.0% | |
| !! | CCAAGTATTGGGTACTCCTG+AGG | + | chr5_2:565680-565699 | None:intergenic | 50.0% |
| !! | CCTCAGGAGTACCCAATACT+TGG | - | chr5_2:565677-565696 | Msa0747730:intron | 50.0% |
| ACAAGGATTCTCCAGAGCAG+TGG | + | chr5_2:565774-565793 | None:intergenic | 50.0% | |
| TCTGTCGAGCACTCAAGACA+CGG | + | chr5_2:565847-565866 | None:intergenic | 50.0% | |
| GATAGCAGGATGCAGTGAGA+AGG | - | chr5_2:566270-566289 | Msa0747730:intron | 50.0% | |
| ! | GTTGCTGTTCACCAAAGACC+AGG | - | chr5_2:566330-566349 | Msa0747730:intron | 50.0% |
| CACCAAAGACCAGGAACTCT+TGG | - | chr5_2:566339-566358 | Msa0747730:intron | 50.0% | |
| !! | GATTTCAGGAGCACCCTGAA+TGG | - | chr5_2:566546-566565 | Msa0747730:intron | 50.0% |
| !! | TGGTTGATGAGTTGCAGGGA+GGG | + | chr5_2:566635-566654 | None:intergenic | 50.0% |
| !! | TTGGTTGATGAGTTGCAGGG+AGG | + | chr5_2:566636-566655 | None:intergenic | 50.0% |
| GTTATGCTAGGGAGTTGGAG+AGG | - | chr5_2:566663-566682 | Msa0747730:intron | 50.0% | |
| TCGTCTTCCCCAATCTCCTC+AGG | - | chr5_2:565661-565680 | Msa0747730:intron | 55.0% | |
| GGGTACTCCTGAGGAGATTG+GGG | + | chr5_2:565671-565690 | None:intergenic | 55.0% | |
| ! | ACAGAGGTGTGCGAGCTTCA+AGG | + | chr5_2:566174-566193 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 562599 | 567032 | 562599 | ID=Msa0747730;Name=Msa0747730 |
| chr5_2 | mRNA | 562599 | 567032 | 562599 | ID=Msa0747730-mRNA-1;Parent=Msa0747730;Name=Msa0747730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=148|1|1|1|1|1|6|338|267 |
| chr5_2 | exon | 562599 | 563077 | 562599 | ID=Msa0747730-mRNA-1:exon:126;Parent=Msa0747730-mRNA-1 |
| chr5_2 | exon | 563256 | 563367 | 563256 | ID=Msa0747730-mRNA-1:exon:125;Parent=Msa0747730-mRNA-1 |
| chr5_2 | exon | 563710 | 563973 | 563710 | ID=Msa0747730-mRNA-1:exon:124;Parent=Msa0747730-mRNA-1 |
| chr5_2 | exon | 564222 | 564324 | 564222 | ID=Msa0747730-mRNA-1:exon:123;Parent=Msa0747730-mRNA-1 |
| chr5_2 | exon | 565576 | 565654 | 565576 | ID=Msa0747730-mRNA-1:exon:122;Parent=Msa0747730-mRNA-1 |
| chr5_2 | exon | 566780 | 567032 | 566780 | ID=Msa0747730-mRNA-1:exon:121;Parent=Msa0747730-mRNA-1 |
| chr5_2 | five_prime_UTR | 566885 | 567032 | 566885 | ID=Msa0747730-mRNA-1:five_prime_utr;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 566780 | 566884 | 566780 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 565576 | 565654 | 565576 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 564222 | 564324 | 564222 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 563710 | 563973 | 563710 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 563256 | 563367 | 563256 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | CDS | 562937 | 563077 | 562937 | ID=Msa0747730-mRNA-1:cds;Parent=Msa0747730-mRNA-1 |
| chr5_2 | three_prime_UTR | 562599 | 562936 | 562599 | ID=Msa0747730-mRNA-1:three_prime_utr;Parent=Msa0747730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
