Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000373.t1 | XP_003626551.2 | 82.3 | 571 | 100 | 1 | 1 | 571 | 10 | 579 | 2.10E-280 | 974.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000373.t1 | A0A1J6KGJ9 | 67.5 | 569 | 179 | 3 | 2 | 570 | 14 | 576 | 5.6e-234 | 811.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000373.t1 | G7L419 | 82.3 | 571 | 100 | 1 | 1 | 571 | 10 | 579 | 1.5e-280 | 974.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045936 | MS.gene000373 | PPI |
| MS.gene34650 | MS.gene000373 | PPI |
| MS.gene78774 | MS.gene000373 | PPI |
| MS.gene25516 | MS.gene000373 | PPI |
| MS.gene073214 | MS.gene000373 | PPI |
| MS.gene000373 | MS.gene046033 | PPI |
| MS.gene053964 | MS.gene000373 | PPI |
| MS.gene99230 | MS.gene000373 | PPI |
| MS.gene36841 | MS.gene000373 | PPI |
| MS.gene064168 | MS.gene000373 | PPI |
| MS.gene95748 | MS.gene000373 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000373.t1 | MTR_7g117110 | 82.312 | 571 | 100 | 1 | 1 | 571 | 10 | 579 | 0.0 | 987 |
| MS.gene000373.t1 | MTR_8g027920 | 70.578 | 571 | 163 | 2 | 1 | 571 | 10 | 575 | 0.0 | 859 |
| MS.gene000373.t1 | MTR_8g027965 | 69.877 | 571 | 167 | 2 | 1 | 571 | 10 | 575 | 0.0 | 851 |
| MS.gene000373.t1 | MTR_8g027955 | 69.177 | 571 | 171 | 2 | 1 | 571 | 17 | 582 | 0.0 | 843 |
| MS.gene000373.t1 | MTR_8g027970 | 66.375 | 571 | 187 | 2 | 1 | 571 | 10 | 575 | 0.0 | 820 |
| MS.gene000373.t1 | MTR_7g117110 | 79.188 | 394 | 81 | 1 | 1 | 394 | 10 | 402 | 0.0 | 659 |
| MS.gene000373.t1 | MTR_0102s0060 | 46.564 | 582 | 296 | 7 | 2 | 571 | 19 | 597 | 0.0 | 550 |
| MS.gene000373.t1 | MTR_8g037720 | 77.812 | 320 | 49 | 1 | 252 | 571 | 138 | 435 | 1.34e-179 | 514 |
| MS.gene000373.t1 | MTR_8g037720 | 80.800 | 125 | 24 | 0 | 1 | 125 | 1 | 125 | 6.65e-65 | 218 |
| MS.gene000373.t1 | MTR_1g047730 | 91.221 | 262 | 12 | 1 | 310 | 571 | 112 | 362 | 7.34e-170 | 486 |
| MS.gene000373.t1 | MTR_1g047730 | 63.924 | 158 | 13 | 2 | 1 | 158 | 1 | 114 | 1.29e-52 | 184 |
| MS.gene000373.t1 | MTR_5g016320 | 40.104 | 576 | 335 | 5 | 1 | 570 | 20 | 591 | 4.69e-149 | 442 |
| MS.gene000373.t1 | MTR_0035s0150 | 40.070 | 569 | 324 | 7 | 3 | 567 | 21 | 576 | 2.76e-143 | 427 |
| MS.gene000373.t1 | MTR_4g045903 | 38.328 | 574 | 339 | 7 | 3 | 568 | 31 | 597 | 1.25e-138 | 416 |
| MS.gene000373.t1 | MTR_8g467000 | 37.824 | 579 | 341 | 7 | 3 | 567 | 16 | 589 | 6.39e-137 | 411 |
| MS.gene000373.t1 | MTR_2g081860 | 37.522 | 581 | 343 | 7 | 3 | 567 | 15 | 591 | 6.31e-135 | 406 |
| MS.gene000373.t1 | MTR_1g088765 | 37.077 | 561 | 329 | 10 | 5 | 546 | 14 | 569 | 9.16e-124 | 377 |
| MS.gene000373.t1 | MTR_1g088765 | 38.837 | 430 | 239 | 10 | 134 | 546 | 3 | 425 | 1.10e-95 | 300 |
| MS.gene000373.t1 | MTR_7g094190 | 34.392 | 567 | 338 | 14 | 2 | 546 | 5 | 559 | 2.21e-92 | 295 |
| MS.gene000373.t1 | MTR_7g094190 | 33.830 | 470 | 280 | 13 | 96 | 546 | 2 | 459 | 7.46e-70 | 233 |
| MS.gene000373.t1 | MTR_7g094330 | 29.936 | 314 | 172 | 8 | 96 | 400 | 2 | 276 | 4.22e-36 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000373.t1 | AT2G46370 | 61.538 | 572 | 212 | 4 | 1 | 570 | 21 | 586 | 0.0 | 752 |
| MS.gene000373.t1 | AT2G46370 | 61.538 | 572 | 212 | 4 | 1 | 570 | 10 | 575 | 0.0 | 751 |
| MS.gene000373.t1 | AT2G46370 | 61.538 | 572 | 212 | 4 | 1 | 570 | 10 | 575 | 0.0 | 751 |
| MS.gene000373.t1 | AT2G46370 | 62.151 | 502 | 184 | 2 | 69 | 570 | 1 | 496 | 0.0 | 681 |
| MS.gene000373.t1 | AT4G03400 | 48.469 | 588 | 280 | 7 | 2 | 571 | 9 | 591 | 0.0 | 570 |
| MS.gene000373.t1 | AT4G03400 | 48.469 | 588 | 280 | 7 | 2 | 571 | 9 | 591 | 0.0 | 570 |
| MS.gene000373.t1 | AT4G37390 | 39.515 | 577 | 333 | 8 | 3 | 570 | 25 | 594 | 1.07e-144 | 431 |
| MS.gene000373.t1 | AT2G23170 | 38.435 | 575 | 338 | 6 | 3 | 570 | 21 | 586 | 3.70e-141 | 421 |
| MS.gene000373.t1 | AT4G27260 | 38.860 | 579 | 331 | 7 | 5 | 567 | 25 | 596 | 8.42e-141 | 421 |
| MS.gene000373.t1 | AT1G59500 | 39.931 | 576 | 326 | 9 | 3 | 570 | 25 | 588 | 9.04e-141 | 421 |
| MS.gene000373.t1 | AT2G14960 | 39.478 | 575 | 326 | 9 | 3 | 570 | 21 | 580 | 1.99e-140 | 419 |
| MS.gene000373.t1 | AT1G23160 | 38.328 | 574 | 328 | 7 | 8 | 568 | 18 | 578 | 1.16e-135 | 407 |
| MS.gene000373.t1 | AT5G54510 | 37.631 | 574 | 339 | 7 | 8 | 567 | 28 | 596 | 4.13e-134 | 404 |
| MS.gene000373.t1 | AT5G13320 | 36.960 | 579 | 339 | 8 | 2 | 567 | 9 | 574 | 6.60e-132 | 397 |
| MS.gene000373.t1 | AT5G13320 | 36.960 | 579 | 339 | 8 | 2 | 567 | 9 | 574 | 6.60e-132 | 397 |
| MS.gene000373.t1 | AT5G13320 | 36.960 | 579 | 339 | 8 | 2 | 567 | 24 | 589 | 1.23e-131 | 397 |
| MS.gene000373.t1 | AT5G13370 | 37.895 | 570 | 338 | 9 | 8 | 567 | 17 | 580 | 3.48e-130 | 393 |
| MS.gene000373.t1 | AT5G13360 | 37.303 | 571 | 339 | 9 | 8 | 567 | 17 | 579 | 7.15e-128 | 387 |
| MS.gene000373.t1 | AT5G13360 | 37.303 | 571 | 339 | 9 | 8 | 567 | 17 | 579 | 7.15e-128 | 387 |
| MS.gene000373.t1 | AT5G13360 | 37.889 | 578 | 326 | 12 | 8 | 567 | 95 | 657 | 6.24e-127 | 387 |
| MS.gene000373.t1 | AT5G13350 | 36.649 | 573 | 341 | 10 | 8 | 567 | 17 | 580 | 1.38e-126 | 384 |
| MS.gene000373.t1 | AT5G13350 | 36.649 | 573 | 341 | 10 | 8 | 567 | 17 | 580 | 1.38e-126 | 384 |
| MS.gene000373.t1 | AT1G48660 | 36.760 | 574 | 340 | 9 | 5 | 567 | 7 | 568 | 1.07e-125 | 381 |
| MS.gene000373.t1 | AT5G13380 | 37.083 | 569 | 343 | 8 | 8 | 567 | 47 | 609 | 5.37e-125 | 381 |
| MS.gene000373.t1 | AT1G48660 | 36.713 | 572 | 340 | 9 | 5 | 567 | 7 | 565 | 7.41e-125 | 379 |
| MS.gene000373.t1 | AT1G28130 | 36.548 | 591 | 333 | 11 | 8 | 567 | 17 | 596 | 3.40e-124 | 378 |
| MS.gene000373.t1 | AT5G51470 | 37.057 | 564 | 335 | 7 | 6 | 561 | 14 | 565 | 1.14e-123 | 376 |
| MS.gene000373.t1 | AT2G47750 | 37.153 | 576 | 345 | 10 | 2 | 567 | 9 | 577 | 2.47e-121 | 370 |
| MS.gene000373.t1 | AT5G51470 | 36.590 | 481 | 286 | 6 | 89 | 561 | 6 | 475 | 3.80e-101 | 315 |
| MS.gene000373.t1 | AT1G48670 | 33.216 | 569 | 311 | 12 | 7 | 567 | 10 | 517 | 3.11e-98 | 308 |
| MS.gene000373.t1 | AT1G28130 | 36.717 | 463 | 254 | 9 | 134 | 567 | 1 | 453 | 1.61e-94 | 297 |
| MS.gene000373.t1 | AT1G48670 | 37.313 | 402 | 234 | 5 | 174 | 567 | 15 | 406 | 7.31e-94 | 293 |
| MS.gene000373.t1 | AT1G48690 | 33.511 | 188 | 121 | 2 | 5 | 192 | 7 | 190 | 1.69e-24 | 101 |
Find 121 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTATGTTAGCTAATTC+TGG | 0.115115 | 1.1:+30966465 | None:intergenic |
| CTGTCACTGCTATGTCTTTA+AGG | 0.139591 | 1.1:-30967350 | MS.gene000373:intron |
| GCAGAATATTTGCAAAATTT+TGG | 0.207902 | 1.1:-30967498 | MS.gene000373:CDS |
| CATGATTCCGAAAATGTATT+TGG | 0.214843 | 1.1:+30966383 | None:intergenic |
| CCGAAAATGTATTTGGCATT+AGG | 0.223722 | 1.1:+30966390 | None:intergenic |
| TCATTCCATGGTACATATTT+CGG | 0.266849 | 1.1:+30967052 | None:intergenic |
| CTTGATCATTACTTGGGATT+AGG | 0.268305 | 1.1:-30965409 | MS.gene000373:CDS |
| CAGGGCACTATGTAATATTC+TGG | 0.270183 | 1.1:-30965588 | MS.gene000373:CDS |
| CTACTACTTACCTGCTGAAT+TGG | 0.271649 | 1.1:+30966080 | None:intergenic |
| TATGCCGTGTTTCCTCAAAA+TGG | 0.283879 | 1.1:-30966222 | MS.gene000373:CDS |
| CTACGAATGAACTTGAGTTT+TGG | 0.296630 | 1.1:+30965754 | None:intergenic |
| GACATAACCGTTCGAATAGA+TGG | 0.299619 | 1.1:+30966507 | None:intergenic |
| CCTAACAACTCGGAGTTCTA+AGG | 0.307012 | 1.1:+30965453 | None:intergenic |
| ACTCGTTACGCACAAAGATT+TGG | 0.330359 | 1.1:-30967430 | MS.gene000373:CDS |
| TCAGTAATTCTGTTGATATA+AGG | 0.340365 | 1.1:+30967405 | None:intergenic |
| ATTATTAGCAGAAGAGAAAC+TGG | 0.346697 | 1.1:-30965653 | MS.gene000373:CDS |
| AAGGCTTTACACTTTATATA+TGG | 0.348340 | 1.1:-30966849 | MS.gene000373:CDS |
| CCTTAGAACTCCGAGTTGTT+AGG | 0.350159 | 1.1:-30965453 | MS.gene000373:CDS |
| ATGTTAGCTAATTCTGGGTT+TGG | 0.353374 | 1.1:+30966471 | None:intergenic |
| GGATTATGTTAGCTAATTCT+GGG | 0.364202 | 1.1:+30966466 | None:intergenic |
| ACGGCATAAGTTGCCAATTC+AGG | 0.368785 | 1.1:+30966237 | None:intergenic |
| GAACAAAATACCACTTCATC+TGG | 0.371036 | 1.1:+30966711 | None:intergenic |
| TAATATTCTGGGAAATCAAT+GGG | 0.390279 | 1.1:-30965576 | MS.gene000373:CDS |
| AGTAACACTGAAACGAATAT+TGG | 0.390563 | 1.1:-30967535 | MS.gene000373:CDS |
| CTCGTAGCTACGACTATTAC+AGG | 0.396155 | 1.1:-30966798 | MS.gene000373:CDS |
| GGCTAATTGTAAATCTTTCT+CGG | 0.403093 | 1.1:+30965693 | None:intergenic |
| TTATATTGTCATCTATTAAG+TGG | 0.410782 | 1.1:-30966672 | MS.gene000373:CDS |
| CTCGTAAATTCAACACTATC+GGG | 0.413035 | 1.1:-30965477 | MS.gene000373:CDS |
| AGGGGACGTGGTAAAAGTTA+TGG | 0.421199 | 1.1:-30965794 | MS.gene000373:CDS |
| CGGAATCATGAGCGGGTCAA+TGG | 0.422195 | 1.1:-30966370 | MS.gene000373:CDS |
| GGGTCAATGGAGCCGTATAT+AGG | 0.428553 | 1.1:-30966357 | MS.gene000373:CDS |
| AAAGATTCTTGATCATTACT+TGG | 0.435190 | 1.1:-30965416 | MS.gene000373:CDS |
| AATGTATAGGAATGAACAAC+TGG | 0.440424 | 1.1:-30966437 | MS.gene000373:CDS |
| CCACGTCCCCTAGTCTATAT+CGG | 0.444919 | 1.1:+30965806 | None:intergenic |
| AATTGAGAACCTGCTCATAT+AGG | 0.447744 | 1.1:+30966985 | None:intergenic |
| TGCAGTTCTGGCACTACTCA+AGG | 0.448035 | 1.1:-30967079 | MS.gene000373:intron |
| GATAAGTCTTTCATCGATGC+AGG | 0.448638 | 1.1:-30965511 | MS.gene000373:CDS |
| GGGGACGTGGTAAAAGTTAT+GGG | 0.452255 | 1.1:-30965793 | MS.gene000373:CDS |
| CTTTCCTTTGCACTGATCCT+CGG | 0.452380 | 1.1:-30966155 | MS.gene000373:CDS |
| GTAATATTCTGGGAAATCAA+TGG | 0.457211 | 1.1:-30965577 | MS.gene000373:CDS |
| AATTGAAAGCAGTACTAAGA+TGG | 0.464021 | 1.1:+30965296 | None:intergenic |
| ACAGGCTTTGTAGTGAGAAT+AGG | 0.464344 | 1.1:+30967369 | None:intergenic |
| GATTGAGTGTTGCAACTGTT+TGG | 0.464387 | 1.1:-30965533 | MS.gene000373:CDS |
| GTCGATTTATCTCATGAGCC+AGG | 0.473431 | 1.1:-30965607 | MS.gene000373:CDS |
| CGGCATAAGTTGCCAATTCA+GGG | 0.474156 | 1.1:+30966238 | None:intergenic |
| GCTCAAAGGTTCTGAAAGCT+TGG | 0.480641 | 1.1:+30966592 | None:intergenic |
| CCTGCTCATATAGGCAAAAG+AGG | 0.486162 | 1.1:+30966994 | None:intergenic |
| TCTCGTAAATTCAACACTAT+CGG | 0.495584 | 1.1:-30965478 | MS.gene000373:CDS |
| AGCAAACAGTTCAAAACAAG+AGG | 0.496078 | 1.1:-30966825 | MS.gene000373:CDS |
| CAAGTTTATAGAAGAATTTG+AGG | 0.497165 | 1.1:-30967589 | MS.gene000373:CDS |
| ACACATGACTTGAAACTCTC+AGG | 0.499043 | 1.1:+30967456 | None:intergenic |
| AAGATTCTTGATCATTACTT+GGG | 0.502906 | 1.1:-30965415 | MS.gene000373:CDS |
| GGAAAACTGAGGCATTATGC+AGG | 0.503180 | 1.1:-30966336 | MS.gene000373:CDS |
| TTCAGAAGCTCCGTAGATAG+AGG | 0.506984 | 1.1:+30966296 | None:intergenic |
| CTCTTCCCACACTTGCTCAA+AGG | 0.512094 | 1.1:+30966578 | None:intergenic |
| TTCACCTCAGTGAGTCCTAC+TGG | 0.518040 | 1.1:+30966132 | None:intergenic |
| AGGGCACTATGTAATATTCT+GGG | 0.521159 | 1.1:-30965587 | MS.gene000373:CDS |
| TCAAACAATTCATCATTCCA+TGG | 0.521283 | 1.1:+30967040 | None:intergenic |
| TCAGAACCTTTGAGCAAGTG+TGG | 0.521906 | 1.1:-30966584 | MS.gene000373:CDS |
| TGGACTATGTTGTGAGCAAA+TGG | 0.529982 | 1.1:+30966612 | None:intergenic |
| GAACTCCGAGTTGTTAGGAA+AGG | 0.539267 | 1.1:-30965448 | MS.gene000373:CDS |
| ATTGTTGTGACCAATTCAGC+AGG | 0.541922 | 1.1:-30966090 | MS.gene000373:intron |
| TTCACTGCATGCGTATAACA+TGG | 0.543670 | 1.1:+30966759 | None:intergenic |
| TAATTTAGATGATGCTTCCA+CGG | 0.544634 | 1.1:+30965672 | None:intergenic |
| TCTATCTACGGAGCTTCTGA+AGG | 0.545686 | 1.1:-30966294 | MS.gene000373:CDS |
| ATGTTATACGCATGCAGTGA+AGG | 0.545900 | 1.1:-30966757 | MS.gene000373:CDS |
| GTTTATACCGATATAGACTA+GGG | 0.546577 | 1.1:-30965813 | MS.gene000373:CDS |
| CACAGTTCCATCTATTCGAA+CGG | 0.549505 | 1.1:-30966514 | MS.gene000373:CDS |
| ACACGGATTGAACGTCCTCT+CGG | 0.553966 | 1.1:+30966640 | None:intergenic |
| GGTTTATACCGATATAGACT+AGG | 0.558139 | 1.1:-30965814 | MS.gene000373:CDS |
| CAGAACCTTTGAGCAAGTGT+GGG | 0.562487 | 1.1:-30966583 | MS.gene000373:CDS |
| CAGAATATTACATAGTGCCC+TGG | 0.563126 | 1.1:+30965589 | None:intergenic |
| CTTAAAGACATAGCAGTGAC+AGG | 0.563677 | 1.1:+30967351 | None:intergenic |
| AACAAAATACCACTTCATCT+GGG | 0.566326 | 1.1:+30966712 | None:intergenic |
| AACACTGAAACGAATATTGG+AGG | 0.572711 | 1.1:-30967532 | MS.gene000373:CDS |
| GAAAGATTTACAATTAGCCG+TGG | 0.574321 | 1.1:-30965689 | MS.gene000373:CDS |
| TGCAAAACAATGTTGTGTGC+AGG | 0.574567 | 1.1:+30965346 | None:intergenic |
| TTTGTAACGATATTCGAGAA+GGG | 0.578255 | 1.1:-30966554 | MS.gene000373:CDS |
| CCTCTAGTTACCTCTATCTA+CGG | 0.580062 | 1.1:-30966306 | MS.gene000373:CDS |
| AACTGAGCACAGATGCAGCA+AGG | 0.581771 | 1.1:-30967566 | MS.gene000373:CDS |
| AAATCTTTGTGCGTAACGAG+TGG | 0.583525 | 1.1:+30967432 | None:intergenic |
| TGTGCAGGACCTACACATCT+TGG | 0.586731 | 1.1:+30965361 | None:intergenic |
| CTTTGTAACGATATTCGAGA+AGG | 0.587449 | 1.1:-30966555 | MS.gene000373:CDS |
| CCGATATAGACTAGGGGACG+TGG | 0.588143 | 1.1:-30965806 | MS.gene000373:CDS |
| TTGTAACGATATTCGAGAAG+GGG | 0.588707 | 1.1:-30966553 | MS.gene000373:CDS |
| ATATTGCAGCCCAGATGAAG+TGG | 0.591696 | 1.1:-30966721 | MS.gene000373:CDS |
| GAAAACTGAGGCATTATGCA+GGG | 0.592349 | 1.1:-30966335 | MS.gene000373:CDS |
| AGTAGGACTCACTGAGGTGA+AGG | 0.596121 | 1.1:-30966130 | MS.gene000373:CDS |
| CTCACACAGCTTAACAATGA+GGG | 0.597282 | 1.1:-30966180 | MS.gene000373:CDS |
| GGACTCACTGAGGTGAAGGT+TGG | 0.597450 | 1.1:-30966126 | MS.gene000373:CDS |
| ATAGGAATGAACAACTGGTA+TGG | 0.597791 | 1.1:-30966432 | MS.gene000373:CDS |
| TCAGTGAGTCCTACTGGCCG+AGG | 0.599758 | 1.1:+30966138 | None:intergenic |
| ACTGAGCACAGATGCAGCAA+GGG | 0.601126 | 1.1:-30967565 | MS.gene000373:CDS |
| GTGAGCAAATGGCGAAGACA+CGG | 0.604638 | 1.1:+30966623 | None:intergenic |
| GCAAACAGTTCAAAACAAGA+GGG | 0.609169 | 1.1:-30966824 | MS.gene000373:CDS |
| CAAAACTCAAGTTCATTCGT+AGG | 0.609589 | 1.1:-30965753 | MS.gene000373:CDS |
| GCAGTTCTGGCACTACTCAA+GGG | 0.610736 | 1.1:-30967078 | MS.gene000373:intron |
| TATAAGACACCAAGATGTGT+AGG | 0.611240 | 1.1:-30965370 | MS.gene000373:CDS |
| TTGGCATTAGGAAACAACTC+TGG | 0.621596 | 1.1:+30966402 | None:intergenic |
| TGCACTGATCCTCGGCCAGT+AGG | 0.629552 | 1.1:-30966147 | MS.gene000373:CDS |
| CTATCTACGGAGCTTCTGAA+GGG | 0.630461 | 1.1:-30966293 | MS.gene000373:CDS |
| TCGATTTATCTCATGAGCCA+GGG | 0.631384 | 1.1:-30965606 | MS.gene000373:CDS |
| ATGTTCCTTTCCTAACAACT+CGG | 0.632446 | 1.1:+30965443 | None:intergenic |
| GGAAGCCGAAATATGTACCA+TGG | 0.632924 | 1.1:-30967057 | MS.gene000373:CDS |
| GGCATAAGTTGCCAATTCAG+GGG | 0.638087 | 1.1:+30966239 | None:intergenic |
| TCATTGTTAAGCTGTGTGAG+AGG | 0.638718 | 1.1:+30966183 | None:intergenic |
| TATATCAACAGAATTACTGA+TGG | 0.645111 | 1.1:-30967402 | MS.gene000373:CDS |
| AAACAGTTCAAAACAAGAGG+GGG | 0.650220 | 1.1:-30966822 | MS.gene000373:CDS |
| TCTCACACAGCTTAACAATG+AGG | 0.650493 | 1.1:-30966181 | MS.gene000373:CDS |
| CCGTAGATAGAGGTAACTAG+AGG | 0.653588 | 1.1:+30966306 | None:intergenic |
| CTGGCCGAGGATCAGTGCAA+AGG | 0.657194 | 1.1:+30966151 | None:intergenic |
| GCATAAGTTGCCAATTCAGG+GGG | 0.662211 | 1.1:+30966240 | None:intergenic |
| TCGTAAATTCAACACTATCG+GGG | 0.674742 | 1.1:-30965476 | MS.gene000373:CDS |
| AAAACTGAGGCATTATGCAG+GGG | 0.676406 | 1.1:-30966334 | MS.gene000373:CDS |
| CAAACAGTTCAAAACAAGAG+GGG | 0.691597 | 1.1:-30966823 | MS.gene000373:CDS |
| AAGTGGACTGATTTACCGAG+AGG | 0.692129 | 1.1:-30966655 | MS.gene000373:CDS |
| GCTCATGAGATAAATCGACA+TGG | 0.699769 | 1.1:+30965611 | None:intergenic |
| AATATTCTGGGAAATCAATG+GGG | 0.705325 | 1.1:-30965575 | MS.gene000373:CDS |
| TTTATACCGATATAGACTAG+GGG | 0.741269 | 1.1:-30965812 | MS.gene000373:CDS |
| AGCCGTATATAGGAAAACTG+AGG | 0.763683 | 1.1:-30966347 | MS.gene000373:CDS |
| TCGGCCAGTAGGACTCACTG+AGG | 0.818243 | 1.1:-30966136 | MS.gene000373:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATGATTGAAAAAAAT+CGG | + | chr1.1:30966202-30966221 | None:intergenic | 10.0% |
| !!! | ATTTTGATATCTATATTTAA+TGG | + | chr1.1:30966934-30966953 | None:intergenic | 10.0% |
| !! | ATAATCCACAAAAAATGTAT+AGG | - | chr1.1:30966438-30966457 | MS.gene000373:CDS | 20.0% |
| !! | TCTGACATATATAATTCAAA+TGG | - | chr1.1:30965986-30966005 | MS.gene000373:intron | 20.0% |
| !! | TGTTTGAAAGTAAAACTAAT+AGG | - | chr1.1:30966960-30966979 | MS.gene000373:intron | 20.0% |
| !! | TTATATTGTCATCTATTAAG+TGG | - | chr1.1:30966216-30966235 | MS.gene000373:CDS | 20.0% |
| !! | TTCGCATAATAGAAATATAT+AGG | + | chr1.1:30965691-30965710 | None:intergenic | 20.0% |
| !!! | AAAGACTTATAAAAGTTTTC+CGG | + | chr1.1:30965777-30965796 | None:intergenic | 20.0% |
| !!! | CAACGTTCTATATTTTTTAT+CGG | + | chr1.1:30965641-30965660 | None:intergenic | 20.0% |
| ! | AAAGATTCTTGATCATTACT+TGG | - | chr1.1:30967472-30967491 | MS.gene000373:CDS | 25.0% |
| ! | AAGATTCTTGATCATTACTT+GGG | - | chr1.1:30967473-30967492 | MS.gene000373:CDS | 25.0% |
| ! | AAGGCTTTACACTTTATATA+TGG | - | chr1.1:30966039-30966058 | MS.gene000373:intron | 25.0% |
| ! | AGTTTCCTTTGATGAAAAAT+GGG | - | chr1.1:30966016-30966035 | MS.gene000373:intron | 25.0% |
| ! | CAAGTTTATAGAAGAATTTG+AGG | - | chr1.1:30965299-30965318 | MS.gene000373:CDS | 25.0% |
| ! | TAAAACTAATAGGTGAACTT+GGG | - | chr1.1:30966970-30966989 | MS.gene000373:intron | 25.0% |
| ! | TAACATGGCTATATAATTTC+AGG | - | chr1.1:30967053-30967072 | MS.gene000373:CDS | 25.0% |
| ! | TATATCAACAGAATTACTGA+TGG | - | chr1.1:30965486-30965505 | MS.gene000373:CDS | 25.0% |
| ! | TCAGTAATTCTGTTGATATA+AGG | + | chr1.1:30965486-30965505 | None:intergenic | 25.0% |
| ! | TTCTATTATGCGAAAATCAT+TGG | - | chr1.1:30965697-30965716 | MS.gene000373:CDS | 25.0% |
| !! | GCAGAATATTTGCAAAATTT+TGG | - | chr1.1:30965390-30965409 | MS.gene000373:CDS | 25.0% |
| !! | TAATATTCTGGGAAATCAAT+GGG | - | chr1.1:30967312-30967331 | MS.gene000373:intron | 25.0% |
| !!! | AATCATGATGTTTTTTTGAG+AGG | - | chr1.1:30965665-30965684 | MS.gene000373:CDS | 25.0% |
| !!! | TCATTCCTATACATTTTTTG+TGG | + | chr1.1:30966446-30966465 | None:intergenic | 25.0% |
| !!! | TTGCAAAATTTTGGTCTTAA+TGG | - | chr1.1:30965399-30965418 | MS.gene000373:CDS | 25.0% |
| AACAAAATACCACTTCATCT+GGG | + | chr1.1:30966179-30966198 | None:intergenic | 30.0% | |
| AAGAAACATAAACAAACGAG+GGG | + | chr1.1:30965576-30965595 | None:intergenic | 30.0% | |
| AATCATTGGATCAAATCGAA+TGG | - | chr1.1:30965711-30965730 | MS.gene000373:CDS | 30.0% | |
| AATGTATAGGAATGAACAAC+TGG | - | chr1.1:30966451-30966470 | MS.gene000373:CDS | 30.0% | |
| AATTGAAAGCAGTACTAAGA+TGG | + | chr1.1:30967595-30967614 | None:intergenic | 30.0% | |
| AGTAACACTGAAACGAATAT+TGG | - | chr1.1:30965353-30965372 | MS.gene000373:CDS | 30.0% | |
| ATTATTAGCAGAAGAGAAAC+TGG | - | chr1.1:30967235-30967254 | MS.gene000373:intron | 30.0% | |
| CATGATTCCGAAAATGTATT+TGG | + | chr1.1:30966508-30966527 | None:intergenic | 30.0% | |
| GAAGAAACATAAACAAACGA+GGG | + | chr1.1:30965577-30965596 | None:intergenic | 30.0% | |
| GAGTTTCCTTTGATGAAAAA+TGG | - | chr1.1:30966015-30966034 | MS.gene000373:intron | 30.0% | |
| GGATTATGTTAGCTAATTCT+GGG | + | chr1.1:30966425-30966444 | None:intergenic | 30.0% | |
| GGCTAATTGTAAATCTTTCT+CGG | + | chr1.1:30967198-30967217 | None:intergenic | 30.0% | |
| GTAAAACTAATAGGTGAACT+TGG | - | chr1.1:30966969-30966988 | MS.gene000373:intron | 30.0% | |
| GTTTATACCGATATAGACTA+GGG | - | chr1.1:30967075-30967094 | MS.gene000373:CDS | 30.0% | |
| TAATTTAGATGATGCTTCCA+CGG | + | chr1.1:30967219-30967238 | None:intergenic | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr1.1:30965851-30965870 | None:intergenic | 30.0% | |
| TCATTCCATGGTACATATTT+CGG | + | chr1.1:30965839-30965858 | None:intergenic | 30.0% | |
| TCTCGTAAATTCAACACTAT+CGG | - | chr1.1:30967410-30967429 | MS.gene000373:CDS | 30.0% | |
| TGAAGAAACATAAACAAACG+AGG | + | chr1.1:30965578-30965597 | None:intergenic | 30.0% | |
| TGGATTATGTTAGCTAATTC+TGG | + | chr1.1:30966426-30966445 | None:intergenic | 30.0% | |
| TTTATACCGATATAGACTAG+GGG | - | chr1.1:30967076-30967095 | MS.gene000373:CDS | 30.0% | |
| TTTGTAACGATATTCGAGAA+GGG | - | chr1.1:30966334-30966353 | MS.gene000373:CDS | 30.0% | |
| ! | AATATTCTGGGAAATCAATG+GGG | - | chr1.1:30967313-30967332 | MS.gene000373:intron | 30.0% |
| ! | CCTAATGCCAAATACATTTT+CGG | - | chr1.1:30966498-30966517 | MS.gene000373:CDS | 30.0% |
| ! | CGGTTTACTACTTTATTTAG+AGG | + | chr1.1:30965621-30965640 | None:intergenic | 30.0% |
| ! | GTAATATTCTGGGAAATCAA+TGG | - | chr1.1:30967311-30967330 | MS.gene000373:intron | 30.0% |
| !!! | TGTTTTGAGAAATGTGACTT+TGG | - | chr1.1:30966885-30966904 | MS.gene000373:intron | 30.0% |
| AAACAGTTCAAAACAAGAGG+GGG | - | chr1.1:30966066-30966085 | MS.gene000373:intron | 35.0% | |
| AACACTGAAACGAATATTGG+AGG | - | chr1.1:30965356-30965375 | MS.gene000373:CDS | 35.0% | |
| AATTGAGAACCTGCTCATAT+AGG | + | chr1.1:30965906-30965925 | None:intergenic | 35.0% | |
| AGCAAACAGTTCAAAACAAG+AGG | - | chr1.1:30966063-30966082 | MS.gene000373:intron | 35.0% | |
| ATAGGAATGAACAACTGGTA+TGG | - | chr1.1:30966456-30966475 | MS.gene000373:CDS | 35.0% | |
| ATATAGCCATGTTAGTTGCT+TGG | + | chr1.1:30967047-30967066 | None:intergenic | 35.0% | |
| ATGTTAGCTAATTCTGGGTT+TGG | + | chr1.1:30966420-30966439 | None:intergenic | 35.0% | |
| ATGTTCCTTTCCTAACAACT+CGG | + | chr1.1:30967448-30967467 | None:intergenic | 35.0% | |
| CAAAACTCAAGTTCATTCGT+AGG | - | chr1.1:30967135-30967154 | MS.gene000373:intron | 35.0% | |
| CAAACAGTTCAAAACAAGAG+GGG | - | chr1.1:30966065-30966084 | MS.gene000373:intron | 35.0% | |
| CAAATCGAATGGCATATATC+TGG | - | chr1.1:30965722-30965741 | MS.gene000373:CDS | 35.0% | |
| CCGAAAATGTATTTGGCATT+AGG | + | chr1.1:30966501-30966520 | None:intergenic | 35.0% | |
| CTCGTAAATTCAACACTATC+GGG | - | chr1.1:30967411-30967430 | MS.gene000373:CDS | 35.0% | |
| CTTGATCATTACTTGGGATT+AGG | - | chr1.1:30967479-30967498 | MS.gene000373:CDS | 35.0% | |
| CTTTGTAACGATATTCGAGA+AGG | - | chr1.1:30966333-30966352 | MS.gene000373:CDS | 35.0% | |
| GAAAGATTTACAATTAGCCG+TGG | - | chr1.1:30967199-30967218 | MS.gene000373:intron | 35.0% | |
| GAACAAAATACCACTTCATC+TGG | + | chr1.1:30966180-30966199 | None:intergenic | 35.0% | |
| GCAAACAGTTCAAAACAAGA+GGG | - | chr1.1:30966064-30966083 | MS.gene000373:intron | 35.0% | |
| GGTTTATACCGATATAGACT+AGG | - | chr1.1:30967074-30967093 | MS.gene000373:CDS | 35.0% | |
| TATAAGACACCAAGATGTGT+AGG | - | chr1.1:30967518-30967537 | MS.gene000373:CDS | 35.0% | |
| TATGATCCAAGCAACTAACA+TGG | - | chr1.1:30967038-30967057 | MS.gene000373:CDS | 35.0% | |
| TCCTTTGATGAAAAATGGGA+AGG | - | chr1.1:30966020-30966039 | MS.gene000373:intron | 35.0% | |
| TCGTAAATTCAACACTATCG+GGG | - | chr1.1:30967412-30967431 | MS.gene000373:CDS | 35.0% | |
| TTGTAACGATATTCGAGAAG+GGG | - | chr1.1:30966335-30966354 | MS.gene000373:CDS | 35.0% | |
| ! | AGGGCACTATGTAATATTCT+GGG | - | chr1.1:30967301-30967320 | MS.gene000373:intron | 35.0% |
| ! | CTACGAATGAACTTGAGTTT+TGG | + | chr1.1:30967137-30967156 | None:intergenic | 35.0% |
| ! | TACATTTTCGGAATCATGAG+CGG | - | chr1.1:30966510-30966529 | MS.gene000373:CDS | 35.0% |
| ! | TGCCTCAGTTTTCCTATATA+CGG | + | chr1.1:30966546-30966565 | None:intergenic | 35.0% |
| !! | AACTCGAAGTATCCATTTTG+AGG | + | chr1.1:30966681-30966700 | None:intergenic | 35.0% |
| !! | GTATCCATTTTGAGGAAACA+CGG | + | chr1.1:30966673-30966692 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGGAGTTGAGTTA+TGG | + | chr1.1:30967124-30967143 | None:intergenic | 35.0% |
| AAATCTTTGTGCGTAACGAG+TGG | + | chr1.1:30965459-30965478 | None:intergenic | 40.0% | |
| ACACATGACTTGAAACTCTC+AGG | + | chr1.1:30965435-30965454 | None:intergenic | 40.0% | |
| ACTCGTTACGCACAAAGATT+TGG | - | chr1.1:30965458-30965477 | MS.gene000373:CDS | 40.0% | |
| AGCCGTATATAGGAAAACTG+AGG | - | chr1.1:30966541-30966560 | MS.gene000373:CDS | 40.0% | |
| ATGTTATACGCATGCAGTGA+AGG | - | chr1.1:30966131-30966150 | MS.gene000373:CDS | 40.0% | |
| ATTGTTGTGACCAATTCAGC+AGG | - | chr1.1:30966798-30966817 | MS.gene000373:CDS | 40.0% | |
| CACAGTTCCATCTATTCGAA+CGG | - | chr1.1:30966374-30966393 | MS.gene000373:CDS | 40.0% | |
| CAGAATATTACATAGTGCCC+TGG | + | chr1.1:30967302-30967321 | None:intergenic | 40.0% | |
| CCTCTAGTTACCTCTATCTA+CGG | - | chr1.1:30966582-30966601 | MS.gene000373:CDS | 40.0% | |
| CTACTACTTACCTGCTGAAT+TGG | + | chr1.1:30966811-30966830 | None:intergenic | 40.0% | |
| CTCACACAGCTTAACAATGA+GGG | - | chr1.1:30966708-30966727 | MS.gene000373:CDS | 40.0% | |
| CTGTCACTGCTATGTCTTTA+AGG | - | chr1.1:30965538-30965557 | MS.gene000373:CDS | 40.0% | |
| CTTAAAGACATAGCAGTGAC+AGG | + | chr1.1:30965540-30965559 | None:intergenic | 40.0% | |
| GACATAACCGTTCGAATAGA+TGG | + | chr1.1:30966384-30966403 | None:intergenic | 40.0% | |
| GATAAGTCTTTCATCGATGC+AGG | - | chr1.1:30967377-30967396 | MS.gene000373:CDS | 40.0% | |
| GCTCATGAGATAAATCGACA+TGG | + | chr1.1:30967280-30967299 | None:intergenic | 40.0% | |
| TATGCCGTGTTTCCTCAAAA+TGG | - | chr1.1:30966666-30966685 | MS.gene000373:CDS | 40.0% | |
| TCATTGTTAAGCTGTGTGAG+AGG | + | chr1.1:30966708-30966727 | None:intergenic | 40.0% | |
| TCGATTTATCTCATGAGCCA+GGG | - | chr1.1:30967282-30967301 | MS.gene000373:intron | 40.0% | |
| TCTCACACAGCTTAACAATG+AGG | - | chr1.1:30966707-30966726 | MS.gene000373:CDS | 40.0% | |
| TGCAAAACAATGTTGTGTGC+AGG | + | chr1.1:30967545-30967564 | None:intergenic | 40.0% | |
| TGGACTATGTTGTGAGCAAA+TGG | + | chr1.1:30966279-30966298 | None:intergenic | 40.0% | |
| TTCACTGCATGCGTATAACA+TGG | + | chr1.1:30966132-30966151 | None:intergenic | 40.0% | |
| TTGAAGTTGAACAATCGCAC+CGG | - | chr1.1:30965755-30965774 | MS.gene000373:CDS | 40.0% | |
| TTGGCATTAGGAAACAACTC+TGG | + | chr1.1:30966489-30966508 | None:intergenic | 40.0% | |
| ! | AAAACTGAGGCATTATGCAG+GGG | - | chr1.1:30966554-30966573 | MS.gene000373:CDS | 40.0% |
| ! | ACAGGCTTTGTAGTGAGAAT+AGG | + | chr1.1:30965522-30965541 | None:intergenic | 40.0% |
| ! | ACATTTTCGGAATCATGAGC+GGG | - | chr1.1:30966511-30966530 | MS.gene000373:CDS | 40.0% |
| ! | CAGGGCACTATGTAATATTC+TGG | - | chr1.1:30967300-30967319 | MS.gene000373:intron | 40.0% |
| ! | GAAAACTGAGGCATTATGCA+GGG | - | chr1.1:30966553-30966572 | MS.gene000373:CDS | 40.0% |
| ! | GATTGAGTGTTGCAACTGTT+TGG | - | chr1.1:30967355-30967374 | MS.gene000373:CDS | 40.0% |
| !! | GCCTTCCCATTTTTCATCAA+AGG | + | chr1.1:30966024-30966043 | None:intergenic | 40.0% |
| ACGGCATAAGTTGCCAATTC+AGG | + | chr1.1:30966654-30966673 | None:intergenic | 45.0% | |
| AGGGGACGTGGTAAAAGTTA+TGG | - | chr1.1:30967094-30967113 | MS.gene000373:intron | 45.0% | |
| ATATTGCAGCCCAGATGAAG+TGG | - | chr1.1:30966167-30966186 | MS.gene000373:CDS | 45.0% | |
| CAGAACCTTTGAGCAAGTGT+GGG | - | chr1.1:30966305-30966324 | MS.gene000373:CDS | 45.0% | |
| CCAATTCAGGGGGAAGTTTA+GGG | + | chr1.1:30966641-30966660 | None:intergenic | 45.0% | |
| CCGTAGATAGAGGTAACTAG+AGG | + | chr1.1:30966585-30966604 | None:intergenic | 45.0% | |
| CCTAACAACTCGGAGTTCTA+AGG | + | chr1.1:30967438-30967457 | None:intergenic | 45.0% | |
| CCTGCTCATATAGGCAAAAG+AGG | + | chr1.1:30965897-30965916 | None:intergenic | 45.0% | |
| CCTTAGAACTCCGAGTTGTT+AGG | - | chr1.1:30967435-30967454 | MS.gene000373:CDS | 45.0% | |
| CGGCATAAGTTGCCAATTCA+GGG | + | chr1.1:30966653-30966672 | None:intergenic | 45.0% | |
| CTATCTACGGAGCTTCTGAA+GGG | - | chr1.1:30966595-30966614 | MS.gene000373:CDS | 45.0% | |
| CTCGTAGCTACGACTATTAC+AGG | - | chr1.1:30966090-30966109 | MS.gene000373:intron | 45.0% | |
| GAACGATGTTCTTGCAGTTC+TGG | - | chr1.1:30965797-30965816 | MS.gene000373:CDS | 45.0% | |
| GAACTCCGAGTTGTTAGGAA+AGG | - | chr1.1:30967440-30967459 | MS.gene000373:CDS | 45.0% | |
| GCATAAGTTGCCAATTCAGG+GGG | + | chr1.1:30966651-30966670 | None:intergenic | 45.0% | |
| GGAAGCCGAAATATGTACCA+TGG | - | chr1.1:30965831-30965850 | MS.gene000373:intron | 45.0% | |
| GGCATAAGTTGCCAATTCAG+GGG | + | chr1.1:30966652-30966671 | None:intergenic | 45.0% | |
| GGGGACGTGGTAAAAGTTAT+GGG | - | chr1.1:30967095-30967114 | MS.gene000373:intron | 45.0% | |
| TCAGAACCTTTGAGCAAGTG+TGG | - | chr1.1:30966304-30966323 | MS.gene000373:CDS | 45.0% | |
| TCTATCTACGGAGCTTCTGA+AGG | - | chr1.1:30966594-30966613 | MS.gene000373:CDS | 45.0% | |
| TTCAGAAGCTCCGTAGATAG+AGG | + | chr1.1:30966595-30966614 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGCCTATATGAGC+AGG | - | chr1.1:30965894-30965913 | MS.gene000373:intron | 45.0% |
| ! | CTTTCCTTTGCACTGATCCT+CGG | - | chr1.1:30966733-30966752 | MS.gene000373:CDS | 45.0% |
| ! | GGAAAACTGAGGCATTATGC+AGG | - | chr1.1:30966552-30966571 | MS.gene000373:CDS | 45.0% |
| ! | GTCGATTTATCTCATGAGCC+AGG | - | chr1.1:30967281-30967300 | MS.gene000373:intron | 45.0% |
| !! | AAGTGGACTGATTTACCGAG+AGG | - | chr1.1:30966233-30966252 | MS.gene000373:CDS | 45.0% |
| !! | GCTCAAAGGTTCTGAAAGCT+TGG | + | chr1.1:30966299-30966318 | None:intergenic | 45.0% |
| AACTGAGCACAGATGCAGCA+AGG | - | chr1.1:30965322-30965341 | MS.gene000373:CDS | 50.0% | |
| ACTGAGCACAGATGCAGCAA+GGG | - | chr1.1:30965323-30965342 | MS.gene000373:CDS | 50.0% | |
| AGTAGGACTCACTGAGGTGA+AGG | - | chr1.1:30966758-30966777 | MS.gene000373:CDS | 50.0% | |
| CCACGTCCCCTAGTCTATAT+CGG | + | chr1.1:30967085-30967104 | None:intergenic | 50.0% | |
| CCCTAAACTTCCCCCTGAAT+TGG | - | chr1.1:30966638-30966657 | MS.gene000373:CDS | 50.0% | |
| CTCTTCCCACACTTGCTCAA+AGG | + | chr1.1:30966313-30966332 | None:intergenic | 50.0% | |
| GCCAATTCAGGGGGAAGTTT+AGG | + | chr1.1:30966642-30966661 | None:intergenic | 50.0% | |
| GGGTCAATGGAGCCGTATAT+AGG | - | chr1.1:30966531-30966550 | MS.gene000373:CDS | 50.0% | |
| GTGAGCAAATGGCGAAGACA+CGG | + | chr1.1:30966268-30966287 | None:intergenic | 50.0% | |
| TGTGCAGGACCTACACATCT+TGG | + | chr1.1:30967530-30967549 | None:intergenic | 50.0% | |
| TTCACCTCAGTGAGTCCTAC+TGG | + | chr1.1:30966759-30966778 | None:intergenic | 50.0% | |
| ! | ACACGGATTGAACGTCCTCT+CGG | + | chr1.1:30966251-30966270 | None:intergenic | 50.0% |
| ! | GCAGTTCTGGCACTACTCAA+GGG | - | chr1.1:30965810-30965829 | MS.gene000373:CDS | 50.0% |
| ! | TGCAGTTCTGGCACTACTCA+AGG | - | chr1.1:30965809-30965828 | MS.gene000373:CDS | 50.0% |
| CCGATATAGACTAGGGGACG+TGG | - | chr1.1:30967082-30967101 | MS.gene000373:intron | 55.0% | |
| CGGAATCATGAGCGGGTCAA+TGG | - | chr1.1:30966518-30966537 | MS.gene000373:CDS | 55.0% | |
| GGACTCACTGAGGTGAAGGT+TGG | - | chr1.1:30966762-30966781 | MS.gene000373:CDS | 55.0% | |
| CTGGCCGAGGATCAGTGCAA+AGG | + | chr1.1:30966740-30966759 | None:intergenic | 60.0% | |
| TCAGTGAGTCCTACTGGCCG+AGG | + | chr1.1:30966753-30966772 | None:intergenic | 60.0% | |
| TCGGCCAGTAGGACTCACTG+AGG | - | chr1.1:30966752-30966771 | MS.gene000373:CDS | 60.0% | |
| ! | TGCACTGATCCTCGGCCAGT+AGG | - | chr1.1:30966741-30966760 | MS.gene000373:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 30965294 | 30967616 | 30965294 | ID=MS.gene000373 |
| chr1.1 | mRNA | 30965294 | 30967616 | 30965294 | ID=MS.gene000373.t1;Parent=MS.gene000373 |
| chr1.1 | exon | 30967351 | 30967616 | 30967351 | ID=MS.gene000373.t1.exon1;Parent=MS.gene000373.t1 |
| chr1.1 | CDS | 30967351 | 30967616 | 30967351 | ID=cds.MS.gene000373.t1;Parent=MS.gene000373.t1 |
| chr1.1 | exon | 30966995 | 30967096 | 30966995 | ID=MS.gene000373.t1.exon2;Parent=MS.gene000373.t1 |
| chr1.1 | CDS | 30966995 | 30967096 | 30966995 | ID=cds.MS.gene000373.t1;Parent=MS.gene000373.t1 |
| chr1.1 | exon | 30966091 | 30966896 | 30966091 | ID=MS.gene000373.t1.exon3;Parent=MS.gene000373.t1 |
| chr1.1 | CDS | 30966091 | 30966896 | 30966091 | ID=cds.MS.gene000373.t1;Parent=MS.gene000373.t1 |
| chr1.1 | exon | 30965294 | 30965835 | 30965294 | ID=MS.gene000373.t1.exon4;Parent=MS.gene000373.t1 |
| chr1.1 | CDS | 30965294 | 30965835 | 30965294 | ID=cds.MS.gene000373.t1;Parent=MS.gene000373.t1 |
| Gene Sequence |
| Protein sequence |
