Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34650.t1 | XP_013445678.1 | 99.3 | 606 | 4 | 0 | 1 | 606 | 1 | 606 | 0.00E+00 | 1233 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34650.t1 | Q9LSQ4 | 80.8 | 609 | 110 | 1 | 1 | 602 | 1 | 609 | 8.1e-300 | 1030.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34650.t1 | A0A072TQB1 | 99.3 | 606 | 4 | 0 | 1 | 606 | 1 | 606 | 0.0e+00 | 1233.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene34650 | -0.82089 | 5.40E-53 | -1.69E-46 |
| MS.gene049251 | MS.gene34650 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene34650 | -0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene34650 | -0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene34650 | -0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene050328 | MS.gene34650 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene050338 | MS.gene34650 | 0.862063 | 6.61E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene34650 | -0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene34650 | -0.802037 | 6.78E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene34650 | 0.813046 | 3.12E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene34650 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene34650 | 0.836005 | 1.21E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene34650 | -0.800705 | 1.27E-48 | -1.69E-46 |
| MS.gene054344 | MS.gene34650 | -0.802437 | 5.61E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene34650 | -0.825864 | 3.72E-54 | -1.69E-46 |
| MS.gene055251 | MS.gene34650 | 0.854544 | 1.15E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene34650 | -0.836452 | 9.28E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene34650 | -0.839847 | 1.24E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene34650 | -0.832853 | 7.46E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene34650 | 0.800434 | 1.44E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene34650 | -0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene056694 | MS.gene34650 | 0.810829 | 9.49E-51 | -1.69E-46 |
| MS.gene056697 | MS.gene34650 | 0.827154 | 1.83E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene34650 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene34650 | 0.829015 | 6.52E-55 | -1.69E-46 |
| MS.gene058382 | MS.gene34650 | 0.831454 | 1.65E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene34650 | -0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene34650 | -0.823224 | 1.55E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene34650 | -0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene34650 | -0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene05926 | MS.gene34650 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene059304 | MS.gene34650 | 0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene34650 | -0.811483 | 6.84E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene34650 | 0.811792 | 5.86E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene34650 | -0.812565 | 3.98E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene34650 | -0.815461 | 9.14E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene34650 | 0.859596 | 3.71E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34650 | MS.gene95299 | PPI |
| MS.gene34650 | MS.gene000373 | PPI |
| MS.gene34650 | MS.gene41352 | PPI |
| MS.gene59583 | MS.gene34650 | PPI |
| MS.gene34650 | MS.gene95297 | PPI |
| MS.gene045936 | MS.gene34650 | PPI |
| MS.gene78774 | MS.gene34650 | PPI |
| MS.gene34650 | MS.gene99230 | PPI |
| MS.gene79749 | MS.gene34650 | PPI |
| MS.gene024458 | MS.gene34650 | PPI |
| MS.gene95295 | MS.gene34650 | PPI |
| MS.gene34650 | MS.gene86023 | PPI |
| MS.gene34650 | MS.gene59582 | PPI |
| MS.gene050633 | MS.gene34650 | PPI |
| MS.gene79751 | MS.gene34650 | PPI |
| MS.gene34650 | MS.gene046366 | PPI |
| MS.gene25516 | MS.gene34650 | PPI |
| MS.gene053964 | MS.gene34650 | PPI |
| MS.gene22809 | MS.gene34650 | PPI |
| MS.gene025922 | MS.gene34650 | PPI |
| MS.gene43375 | MS.gene34650 | PPI |
| MS.gene36841 | MS.gene34650 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34650.t1 | MTR_8g467000 | 99.340 | 606 | 4 | 0 | 1 | 606 | 1 | 606 | 0.0 | 1249 |
| MS.gene34650.t1 | MTR_2g081860 | 80.865 | 601 | 112 | 2 | 8 | 605 | 7 | 607 | 0.0 | 1018 |
| MS.gene34650.t1 | MTR_4g045903 | 69.839 | 620 | 158 | 6 | 1 | 602 | 1 | 609 | 0.0 | 908 |
| MS.gene34650.t1 | MTR_0035s0150 | 63.636 | 594 | 198 | 3 | 4 | 597 | 9 | 584 | 0.0 | 802 |
| MS.gene34650.t1 | MTR_5g016320 | 62.755 | 588 | 208 | 3 | 16 | 601 | 22 | 600 | 0.0 | 776 |
| MS.gene34650.t1 | MTR_1g088765 | 53.000 | 600 | 267 | 6 | 7 | 597 | 3 | 596 | 0.0 | 642 |
| MS.gene34650.t1 | MTR_1g088765 | 55.022 | 458 | 193 | 5 | 147 | 597 | 1 | 452 | 1.10e-179 | 516 |
| MS.gene34650.t1 | MTR_8g027970 | 36.700 | 594 | 348 | 7 | 1 | 589 | 1 | 571 | 8.56e-132 | 398 |
| MS.gene34650.t1 | MTR_8g027955 | 36.097 | 579 | 348 | 7 | 15 | 589 | 18 | 578 | 1.68e-131 | 397 |
| MS.gene34650.t1 | MTR_8g027965 | 36.615 | 579 | 345 | 7 | 15 | 589 | 11 | 571 | 1.94e-131 | 397 |
| MS.gene34650.t1 | MTR_8g027920 | 35.456 | 581 | 349 | 8 | 15 | 589 | 11 | 571 | 6.31e-128 | 388 |
| MS.gene34650.t1 | MTR_7g117110 | 36.442 | 579 | 348 | 10 | 16 | 589 | 12 | 575 | 8.92e-128 | 388 |
| MS.gene34650.t1 | MTR_0102s0060 | 34.983 | 586 | 359 | 7 | 15 | 589 | 19 | 593 | 3.70e-126 | 384 |
| MS.gene34650.t1 | MTR_7g117110 | 35.162 | 401 | 248 | 6 | 16 | 414 | 12 | 402 | 8.82e-80 | 258 |
| MS.gene34650.t1 | MTR_7g094190 | 29.897 | 582 | 375 | 14 | 14 | 579 | 4 | 568 | 4.06e-75 | 251 |
| MS.gene34650.t1 | MTR_7g094190 | 32.170 | 401 | 249 | 8 | 188 | 579 | 82 | 468 | 6.21e-62 | 213 |
| MS.gene34650.t1 | MTR_8g037720 | 34.604 | 341 | 182 | 7 | 255 | 589 | 126 | 431 | 6.59e-61 | 209 |
| MS.gene34650.t1 | MTR_8g037720 | 40.404 | 99 | 59 | 0 | 16 | 114 | 3 | 101 | 4.93e-17 | 84.3 |
| MS.gene34650.t1 | MTR_1g047730 | 38.290 | 269 | 139 | 5 | 324 | 589 | 114 | 358 | 6.26e-53 | 185 |
| MS.gene34650.t1 | MTR_3g023280 | 53.211 | 109 | 49 | 1 | 491 | 597 | 19 | 127 | 3.29e-30 | 115 |
| MS.gene34650.t1 | MTR_7g094330 | 30.769 | 234 | 122 | 4 | 188 | 420 | 82 | 276 | 3.41e-30 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34650.t1 | AT5G54510 | 80.788 | 609 | 110 | 1 | 1 | 602 | 1 | 609 | 0.0 | 1046 |
| MS.gene34650.t1 | AT4G27260 | 80.131 | 609 | 114 | 1 | 1 | 602 | 1 | 609 | 0.0 | 1040 |
| MS.gene34650.t1 | AT2G14960 | 63.333 | 600 | 199 | 3 | 4 | 601 | 9 | 589 | 0.0 | 798 |
| MS.gene34650.t1 | AT4G37390 | 62.626 | 594 | 210 | 5 | 12 | 601 | 18 | 603 | 0.0 | 785 |
| MS.gene34650.t1 | AT2G23170 | 61.960 | 602 | 210 | 6 | 4 | 601 | 9 | 595 | 0.0 | 772 |
| MS.gene34650.t1 | AT1G59500 | 59.832 | 595 | 219 | 6 | 12 | 601 | 18 | 597 | 0.0 | 737 |
| MS.gene34650.t1 | AT1G28130 | 56.757 | 592 | 243 | 8 | 18 | 597 | 14 | 604 | 0.0 | 699 |
| MS.gene34650.t1 | AT2G47750 | 52.203 | 590 | 264 | 8 | 14 | 597 | 8 | 585 | 0.0 | 615 |
| MS.gene34650.t1 | AT1G23160 | 48.983 | 590 | 274 | 5 | 9 | 589 | 6 | 577 | 0.0 | 580 |
| MS.gene34650.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 88 | 663 | 0.0 | 573 |
| MS.gene34650.t1 | AT5G13370 | 48.900 | 591 | 279 | 8 | 14 | 595 | 10 | 586 | 0.0 | 572 |
| MS.gene34650.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 10 | 585 | 0.0 | 572 |
| MS.gene34650.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 10 | 585 | 0.0 | 572 |
| MS.gene34650.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 15 | 574 | 0.0 | 565 |
| MS.gene34650.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 30 | 589 | 0.0 | 565 |
| MS.gene34650.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 15 | 574 | 0.0 | 565 |
| MS.gene34650.t1 | AT1G28130 | 59.653 | 461 | 176 | 6 | 147 | 597 | 1 | 461 | 0.0 | 565 |
| MS.gene34650.t1 | AT5G13380 | 46.678 | 587 | 289 | 8 | 18 | 595 | 44 | 615 | 0.0 | 548 |
| MS.gene34650.t1 | AT5G13350 | 46.701 | 591 | 292 | 7 | 15 | 596 | 11 | 587 | 0.0 | 544 |
| MS.gene34650.t1 | AT5G13350 | 46.701 | 591 | 292 | 7 | 15 | 596 | 11 | 587 | 0.0 | 544 |
| MS.gene34650.t1 | AT1G48660 | 44.560 | 579 | 299 | 5 | 21 | 593 | 10 | 572 | 0.0 | 524 |
| MS.gene34650.t1 | AT5G51470 | 45.927 | 577 | 291 | 4 | 19 | 591 | 14 | 573 | 4.09e-180 | 522 |
| MS.gene34650.t1 | AT1G48660 | 44.714 | 577 | 298 | 5 | 21 | 593 | 10 | 569 | 4.95e-180 | 521 |
| MS.gene34650.t1 | AT1G48670 | 43.772 | 578 | 253 | 7 | 21 | 593 | 11 | 521 | 1.43e-160 | 470 |
| MS.gene34650.t1 | AT5G51470 | 45.272 | 497 | 252 | 3 | 99 | 591 | 3 | 483 | 2.59e-148 | 437 |
| MS.gene34650.t1 | AT1G48670 | 50.236 | 424 | 192 | 3 | 174 | 593 | 2 | 410 | 1.64e-145 | 427 |
| MS.gene34650.t1 | AT2G46370 | 37.919 | 596 | 338 | 12 | 6 | 589 | 8 | 583 | 1.79e-133 | 403 |
| MS.gene34650.t1 | AT2G46370 | 38.554 | 581 | 330 | 11 | 16 | 589 | 12 | 572 | 2.42e-133 | 402 |
| MS.gene34650.t1 | AT2G46370 | 38.554 | 581 | 330 | 11 | 16 | 589 | 12 | 572 | 2.42e-133 | 402 |
| MS.gene34650.t1 | AT4G03400 | 34.701 | 585 | 362 | 5 | 17 | 589 | 11 | 587 | 5.93e-122 | 373 |
| MS.gene34650.t1 | AT4G03400 | 34.701 | 585 | 362 | 5 | 17 | 589 | 11 | 587 | 5.93e-122 | 373 |
| MS.gene34650.t1 | AT2G46370 | 38.943 | 511 | 287 | 9 | 84 | 589 | 3 | 493 | 1.11e-116 | 356 |
| MS.gene34650.t1 | AT1G48690 | 38.919 | 185 | 109 | 2 | 21 | 205 | 10 | 190 | 1.41e-38 | 140 |
Find 117 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACAGTATATTCCTATTT+TGG | 0.111812 | 8.1:+46812898 | MS.gene34650:CDS |
| GGAGCCCACTTTGGACATTT+AGG | 0.218059 | 8.1:-46814085 | None:intergenic |
| CAAGTTTAGGATCAGGTTTA+AGG | 0.254241 | 8.1:-46812772 | None:intergenic |
| TTTGTTCCTGGTTTAGAAAA+AGG | 0.255175 | 8.1:+46812377 | MS.gene34650:CDS |
| ATGGATTATGCCATTAGTTT+AGG | 0.291005 | 8.1:+46813968 | MS.gene34650:CDS |
| TGGATAAAATCAGCAAGTTT+AGG | 0.292869 | 8.1:-46812785 | None:intergenic |
| TTGCTATAATGATCCAAAAT+AGG | 0.297088 | 8.1:-46812911 | None:intergenic |
| ACTGTTGAGTCAGTAATTAA+AGG | 0.298239 | 8.1:-46812728 | None:intergenic |
| ATAAGGTCTATCTCTAAAAT+AGG | 0.318744 | 8.1:-46812492 | None:intergenic |
| GTGATGAGCCAGTTTGTTCC+TGG | 0.324174 | 8.1:+46812365 | MS.gene34650:CDS |
| GGACACAGTACAGTTTCATT+TGG | 0.346171 | 8.1:-46812539 | None:intergenic |
| CCAACAATTGAAGACGAGTT+AGG | 0.350482 | 8.1:+46812308 | MS.gene34650:CDS |
| TGAGATCAAGATTGTTGAAC+AGG | 0.353995 | 8.1:+46813928 | MS.gene34650:CDS |
| CCTAACTCGTCTTCAATTGT+TGG | 0.355115 | 8.1:-46812308 | None:intergenic |
| CTTGGCAGGGGATAATTACT+AGG | 0.356717 | 8.1:+46812828 | MS.gene34650:CDS |
| TTGTGCAGTTCTGGGACATC+TGG | 0.365207 | 8.1:+46812266 | MS.gene34650:intron |
| TTGTAATAGCTAGTTAAAAC+TGG | 0.369819 | 8.1:-46812464 | None:intergenic |
| TCTTTCTCATTAAGAGATCT+AGG | 0.375377 | 8.1:-46813106 | None:intergenic |
| GGGCTTGTGTAGTTTGTGTA+AGG | 0.378276 | 8.1:-46812518 | None:intergenic |
| CTGTTGAGTCAGTAATTAAA+GGG | 0.382825 | 8.1:-46812727 | None:intergenic |
| CAACGTTTGCATTGCGAGAC+AGG | 0.392772 | 8.1:-46811798 | None:intergenic |
| AGGGGATAATTACTAGGCTT+TGG | 0.396785 | 8.1:+46812834 | MS.gene34650:CDS |
| ACATCCACATACTTGGTATT+AGG | 0.400630 | 8.1:-46812857 | None:intergenic |
| CCTAGTGAGAAACTCGGAAA+TGG | 0.402657 | 8.1:-46811965 | None:intergenic |
| GAGAAACTCGGAAATGGGTT+TGG | 0.402818 | 8.1:-46811959 | None:intergenic |
| ATATCTTCATATGAAATAAC+AGG | 0.406853 | 8.1:-46811883 | None:intergenic |
| CTTTGCAATGATATTAGAAC+TGG | 0.408730 | 8.1:+46812695 | MS.gene34650:CDS |
| GACACAGTACAGTTTCATTT+GGG | 0.411007 | 8.1:-46812538 | None:intergenic |
| GTTGGTGCTGTATTTGCCTC+TGG | 0.411899 | 8.1:+46812629 | MS.gene34650:CDS |
| ATGTATTCTCAACTGCTTTG+TGG | 0.413819 | 8.1:+46812578 | MS.gene34650:CDS |
| TTGAACTTGGTCAGCGTTTG+AGG | 0.418697 | 8.1:-46811755 | None:intergenic |
| AAATCAGCAAGTTTAGGATC+AGG | 0.419446 | 8.1:-46812779 | None:intergenic |
| TTTCTAAACCAGGAACAAAC+TGG | 0.423901 | 8.1:-46812373 | None:intergenic |
| TACATGCTTTGGTATGAATC+AGG | 0.429558 | 8.1:-46812560 | None:intergenic |
| CAGGTCACTATGTCCTCTAC+TGG | 0.430139 | 8.1:+46813777 | MS.gene34650:CDS |
| AATTGAAGCACCTAAACTAA+TGG | 0.431562 | 8.1:-46813978 | None:intergenic |
| GCAGTTGAGAATACATGCTT+TGG | 0.432411 | 8.1:-46812571 | None:intergenic |
| GCTTCTAGTGAATGTTACTT+TGG | 0.432831 | 8.1:+46812962 | MS.gene34650:CDS |
| GTCTGCATAGCTAGTGTATT+CGG | 0.433199 | 8.1:-46813741 | None:intergenic |
| TTGGAGATACGGTCAATATC+AGG | 0.434074 | 8.1:-46811910 | None:intergenic |
| CACAATAACATCCACATACT+TGG | 0.435316 | 8.1:-46812864 | None:intergenic |
| GCAGACACAACAACAATTCC+AGG | 0.444605 | 8.1:+46813758 | MS.gene34650:CDS |
| TTCTAATATCATTGCAAAGA+AGG | 0.447565 | 8.1:-46812691 | None:intergenic |
| CAACAATTGAAGACGAGTTA+GGG | 0.472679 | 8.1:+46812309 | MS.gene34650:CDS |
| AAATGTCCAAAGTGGGCTCC+TGG | 0.483198 | 8.1:+46814088 | MS.gene34650:CDS |
| TTAGGTTCCTTGAGAAACAT+TGG | 0.484372 | 8.1:+46812666 | MS.gene34650:CDS |
| ACTCAACAGCGTGTATCGAC+AGG | 0.486087 | 8.1:+46813874 | MS.gene34650:CDS |
| TTGTAGCCTCTAGGTGCCTC+AGG | 0.487179 | 8.1:-46811685 | None:intergenic |
| TAGTTTGTGTAAGGGTCATA+AGG | 0.487342 | 8.1:-46812509 | None:intergenic |
| TGAGAAAGAGCAGAAAGAGT+TGG | 0.487483 | 8.1:+46813120 | MS.gene34650:CDS |
| CGCTGACCAAGTTCAACAAA+AGG | 0.497019 | 8.1:+46811762 | MS.gene34650:CDS |
| GCCTCTAGGTGCCTCAGGCA+TGG | 0.502602 | 8.1:-46811680 | None:intergenic |
| CGGAAATGGGTTTGGAGCAA+AGG | 0.507191 | 8.1:-46811951 | None:intergenic |
| CTAGTGAGAAACTCGGAAAT+GGG | 0.511635 | 8.1:-46811964 | None:intergenic |
| TAACATCCTCAATGAAGTCC+AGG | 0.517548 | 8.1:-46811732 | None:intergenic |
| CTTGTTGTCACTACTTATGC+TGG | 0.517694 | 8.1:+46813181 | MS.gene34650:CDS |
| GTATCGACAGGGCCGCGTCT+CGG | 0.517767 | 8.1:+46813886 | MS.gene34650:CDS |
| AGGTGTCACCATTGGAGATA+CGG | 0.520760 | 8.1:-46811921 | None:intergenic |
| CTTAAAAGATATGATCTCAA+TGG | 0.521709 | 8.1:+46811826 | MS.gene34650:CDS |
| GAGTTCAAGAGTTCAACAAC+AGG | 0.523704 | 8.1:-46814037 | None:intergenic |
| GGAACAAACTGGCTCATCAC+TGG | 0.525232 | 8.1:-46812362 | None:intergenic |
| GATAGGAGAGGTGTCACCAT+TGG | 0.527208 | 8.1:-46811929 | None:intergenic |
| TATGTGGATGTTATTGTGAC+TGG | 0.529295 | 8.1:+46812869 | MS.gene34650:CDS |
| GGTGATGTGCTGAAGGTCGC+TGG | 0.529685 | 8.1:+46813572 | MS.gene34650:CDS |
| GGACTATACCGTTACCGTGT+TGG | 0.537275 | 8.1:+46813551 | MS.gene34650:intron |
| ATGGGTTTGGAGCAAAGGAT+AGG | 0.537304 | 8.1:-46811946 | None:intergenic |
| GAAGGTTCCAATGTTTCTCA+AGG | 0.537967 | 8.1:-46812673 | None:intergenic |
| GGCTTGTGTAGTTTGTGTAA+GGG | 0.539250 | 8.1:-46812517 | None:intergenic |
| TTGTTGAACTCTTGAACTCA+AGG | 0.540254 | 8.1:+46814041 | MS.gene34650:CDS |
| TCGGACACGGTTGCATCGAA+TGG | 0.543360 | 8.1:-46813722 | None:intergenic |
| CCATTTCCGAGTTTCTCACT+AGG | 0.547573 | 8.1:+46811965 | MS.gene34650:CDS |
| CGCGTCTCGGACAAATCTAT+CGG | 0.552359 | 8.1:+46813899 | MS.gene34650:CDS |
| GAACTTGTTGATGTCAAACT+TGG | 0.554297 | 8.1:+46813145 | MS.gene34650:CDS |
| TTATGACCAGGAGCCCACTT+TGG | 0.554897 | 8.1:-46814094 | None:intergenic |
| CCGTGTTGGTGATGTGCTGA+AGG | 0.563049 | 8.1:+46813565 | MS.gene34650:CDS |
| CGGCACACAAAGTTGAATTG+TGG | 0.565157 | 8.1:-46813611 | None:intergenic |
| GGGCTCCTGGTCATAAGCAA+TGG | 0.566694 | 8.1:+46814101 | MS.gene34650:CDS |
| TTGGCCTAATACCAAGTATG+TGG | 0.569778 | 8.1:+46812853 | MS.gene34650:CDS |
| TGCAGTTCTGGGACATCTGG+AGG | 0.569833 | 8.1:+46812269 | MS.gene34650:intron |
| ACTTCACTAGGTTGACAAAG+AGG | 0.571857 | 8.1:-46812998 | None:intergenic |
| CTTCACTAGGTTGACAAAGA+GGG | 0.573620 | 8.1:-46812997 | None:intergenic |
| ACACCATTACTTCTATTCAC+AGG | 0.573990 | 8.1:-46813064 | None:intergenic |
| TTGCCTGTGAATAGAAGTAA+TGG | 0.577251 | 8.1:+46813061 | MS.gene34650:CDS |
| TGGTCTTTGTCAAAACAAAG+AGG | 0.579177 | 8.1:+46812598 | MS.gene34650:CDS |
| TTGATCCATTGCTTATGACC+AGG | 0.582743 | 8.1:-46814106 | None:intergenic |
| AATTCAAAGTAGCACATGGT+AGG | 0.583971 | 8.1:-46813037 | None:intergenic |
| TCAGAGTGAGTTCCCAGTAG+AGG | 0.584102 | 8.1:-46813790 | None:intergenic |
| GGTGCAAACTTCACACACCT+TGG | 0.586326 | 8.1:-46814016 | None:intergenic |
| CCTAATGTTTATAAAATCTG+AGG | 0.588832 | 8.1:+46812412 | MS.gene34650:CDS |
| TCAACAAGGTTGTAGCCTCT+AGG | 0.591413 | 8.1:-46811694 | None:intergenic |
| TGTTGAACTCTTGAACTCAA+GGG | 0.593725 | 8.1:+46814042 | MS.gene34650:CDS |
| TCAACAATCTTGATCTCAAG+CGG | 0.595363 | 8.1:-46813923 | None:intergenic |
| AAATCTGAGGCTAAAACACC+TGG | 0.603615 | 8.1:+46812425 | MS.gene34650:CDS |
| CAGTAGAGGACATAGTGACC+TGG | 0.605308 | 8.1:-46813776 | None:intergenic |
| GATATTGACCGTATCTCCAA+TGG | 0.606450 | 8.1:+46811913 | MS.gene34650:CDS |
| CACCTGGTGGAATTGTAGCT+AGG | 0.610611 | 8.1:+46812441 | MS.gene34650:CDS |
| AGGTCACTATGTCCTCTACT+GGG | 0.614973 | 8.1:+46813778 | MS.gene34650:CDS |
| GGCCTAGCTACAATTCCACC+AGG | 0.617990 | 8.1:-46812443 | None:intergenic |
| GCATACATAGTGCAAACAAG+TGG | 0.618340 | 8.1:-46812941 | None:intergenic |
| TTTGGAGCAAAGGATAGGAG+AGG | 0.620341 | 8.1:-46811941 | None:intergenic |
| TCTGAGGCTAAAACACCTGG+TGG | 0.620910 | 8.1:+46812428 | MS.gene34650:CDS |
| TTAGTCCTAAATGTCCAAAG+TGG | 0.623916 | 8.1:+46814080 | MS.gene34650:CDS |
| GCACATCACCAACACGGTAA+CGG | 0.629284 | 8.1:-46813559 | None:intergenic |
| CTCAACAGCGTGTATCGACA+GGG | 0.631957 | 8.1:+46813875 | MS.gene34650:CDS |
| CGATAGATTTGTCCGAGACG+CGG | 0.631989 | 8.1:-46813898 | None:intergenic |
| TAGTCCTAAATGTCCAAAGT+GGG | 0.633390 | 8.1:+46814081 | MS.gene34650:CDS |
| CAATTGAAGACGAGTTAGGG+AGG | 0.639368 | 8.1:+46812312 | MS.gene34650:CDS |
| AGTTGAGCTTCAAAATGCAA+TGG | 0.645898 | 8.1:+46813676 | MS.gene34650:CDS |
| AACAACACACACCATGCCTG+AGG | 0.659606 | 8.1:+46811669 | None:intergenic |
| GACGAACCTAGTGAGAAACT+CGG | 0.661604 | 8.1:-46811971 | None:intergenic |
| CCTTCAGCACATCACCAACA+CGG | 0.670344 | 8.1:-46813565 | None:intergenic |
| AATAGCCCTTATAAAACCAG+AGG | 0.675707 | 8.1:-46812645 | None:intergenic |
| ATAGCTAGTGTATTCGGACA+CGG | 0.679053 | 8.1:-46813735 | None:intergenic |
| GAGATCAAGATTGTTGAACA+GGG | 0.686060 | 8.1:+46813929 | MS.gene34650:CDS |
| AGAGTGTAAGACACTTCACT+AGG | 0.687486 | 8.1:-46813010 | None:intergenic |
| TTAATCAGTACAAGACACCA+AGG | 0.718724 | 8.1:+46813999 | MS.gene34650:CDS |
| ACCATGCCTGAGGCACCTAG+AGG | 0.728145 | 8.1:+46811679 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATTAAATTAAAAGTT+TGG | - | chr8.1:46813257-46813276 | None:intergenic | 10.0% |
| !!! | TCTAACTTTTTCTTATATAA+AGG | + | chr8.1:46812110-46812129 | MS.gene34650:intron | 15.0% |
| !! | ATATCTTCATATGAAATAAC+AGG | - | chr8.1:46811886-46811905 | None:intergenic | 20.0% |
| !! | TCATCAAAAGTTAATGTATA+TGG | + | chr8.1:46812050-46812069 | MS.gene34650:intron | 20.0% |
| !! | TTTATATATGTTACTCTCTT+TGG | - | chr8.1:46812137-46812156 | None:intergenic | 20.0% |
| !!! | ATGTAAGTGGTTTTAAATTT+TGG | - | chr8.1:46812077-46812096 | None:intergenic | 20.0% |
| !!! | TGTTTGTCAATTTTTTTCTT+AGG | + | chr8.1:46813530-46813549 | MS.gene34650:intron | 20.0% |
| ! | CCTAATGTTTATAAAATCTG+AGG | + | chr8.1:46812412-46812431 | MS.gene34650:CDS | 25.0% |
| ! | CTTAAAAGATATGATCTCAA+TGG | + | chr8.1:46811826-46811845 | MS.gene34650:CDS | 25.0% |
| ! | TTCTAATATCATTGCAAAGA+AGG | - | chr8.1:46812694-46812713 | None:intergenic | 25.0% |
| ! | TTCTATATATTAGACAAGGT+TGG | + | chr8.1:46812027-46812046 | MS.gene34650:intron | 25.0% |
| ! | TTGCTATAATGATCCAAAAT+AGG | - | chr8.1:46812914-46812933 | None:intergenic | 25.0% |
| ! | TTGTAATAGCTAGTTAAAAC+TGG | - | chr8.1:46812467-46812486 | None:intergenic | 25.0% |
| !! | AATTTTTACTACACTCAGTT+TGG | - | chr8.1:46812808-46812827 | None:intergenic | 25.0% |
| !! | ATTTTGGATCATTATAGCAA+TGG | + | chr8.1:46812914-46812933 | MS.gene34650:CDS | 25.0% |
| !! | CCTCAGATTTTATAAACATT+AGG | - | chr8.1:46812415-46812434 | None:intergenic | 25.0% |
| !!! | AAATTTATTTTGTGCAGTTC+TGG | + | chr8.1:46812257-46812276 | MS.gene34650:intron | 25.0% |
| !!! | AATTTATTTTGTGCAGTTCT+GGG | + | chr8.1:46812258-46812277 | MS.gene34650:intron | 25.0% |
| !!! | ATAAGGTCTATCTCTAAAAT+AGG | - | chr8.1:46812495-46812514 | None:intergenic | 25.0% |
| !!! | TCAAAACAAAGAGGTTTTAA+GGG | + | chr8.1:46812607-46812626 | MS.gene34650:CDS | 25.0% |
| !!! | TTTTTTGAACTGCTATTGAT+GGG | + | chr8.1:46812218-46812237 | MS.gene34650:intron | 25.0% |
| !!! | TTTTTTTGAACTGCTATTGA+TGG | + | chr8.1:46812217-46812236 | MS.gene34650:intron | 25.0% |
| !!! | TTTTTTTGTTCTGTTCAACA+AGG | - | chr8.1:46811711-46811730 | None:intergenic | 25.0% |
| ACTGTTGAGTCAGTAATTAA+AGG | - | chr8.1:46812731-46812750 | None:intergenic | 30.0% | |
| CAAAAATTCAAAGTAGCACA+TGG | - | chr8.1:46813044-46813063 | None:intergenic | 30.0% | |
| CTGAGTGTAGTAAAAATTCT+TGG | + | chr8.1:46812810-46812829 | MS.gene34650:CDS | 30.0% | |
| CTGTTGAGTCAGTAATTAAA+GGG | - | chr8.1:46812730-46812749 | None:intergenic | 30.0% | |
| CTTTGCAATGATATTAGAAC+TGG | + | chr8.1:46812695-46812714 | MS.gene34650:CDS | 30.0% | |
| TAATATATAGAACCAGAGGA+AGG | - | chr8.1:46812019-46812038 | None:intergenic | 30.0% | |
| TCAACAAATGTTGATGTAAG+TGG | - | chr8.1:46812090-46812109 | None:intergenic | 30.0% | |
| TCTTTCTCATTAAGAGATCT+AGG | - | chr8.1:46813109-46813128 | None:intergenic | 30.0% | |
| TGAACAGAACAAAAAAATCC+TGG | + | chr8.1:46811714-46811733 | MS.gene34650:CDS | 30.0% | |
| TGGATAAAATCAGCAAGTTT+AGG | - | chr8.1:46812788-46812807 | None:intergenic | 30.0% | |
| TGTAGTAAAAATTCTTGGCA+GGG | + | chr8.1:46812815-46812834 | MS.gene34650:CDS | 30.0% | |
| TGTCTAATATATAGAACCAG+AGG | - | chr8.1:46812023-46812042 | None:intergenic | 30.0% | |
| TGTGTAACTGTAAACAGATT+TGG | + | chr8.1:46813466-46813485 | MS.gene34650:intron | 30.0% | |
| TTGTTCCTGGTTTAGAAAAA+GGG | + | chr8.1:46812378-46812397 | MS.gene34650:CDS | 30.0% | |
| TTTGTTCCTGGTTTAGAAAA+AGG | + | chr8.1:46812377-46812396 | MS.gene34650:CDS | 30.0% | |
| ! | AATTGAAGCACCTAAACTAA+TGG | - | chr8.1:46813981-46814000 | None:intergenic | 30.0% |
| ! | ATGGATTATGCCATTAGTTT+AGG | + | chr8.1:46813968-46813987 | MS.gene34650:CDS | 30.0% |
| ! | GTCAAAACAAAGAGGTTTTA+AGG | + | chr8.1:46812606-46812625 | MS.gene34650:CDS | 30.0% |
| ! | GTCACAGTATATTCCTATTT+TGG | + | chr8.1:46812898-46812917 | MS.gene34650:CDS | 30.0% |
| !! | CTGGTTCTATATATTAGACA+AGG | + | chr8.1:46812023-46812042 | MS.gene34650:intron | 30.0% |
| !!! | ATTTGCCTCTGGTTTTATAA+GGG | + | chr8.1:46812640-46812659 | MS.gene34650:CDS | 30.0% |
| !!! | TATTTGCCTCTGGTTTTATA+AGG | + | chr8.1:46812639-46812658 | MS.gene34650:CDS | 30.0% |
| AAAAATCCTGGACTTCATTG+AGG | + | chr8.1:46811726-46811745 | MS.gene34650:CDS | 35.0% | |
| AATAGCCCTTATAAAACCAG+AGG | - | chr8.1:46812648-46812667 | None:intergenic | 35.0% | |
| AATTCAAAGTAGCACATGGT+AGG | - | chr8.1:46813040-46813059 | None:intergenic | 35.0% | |
| ACACCATTACTTCTATTCAC+AGG | - | chr8.1:46813067-46813086 | None:intergenic | 35.0% | |
| ACATCCACATACTTGGTATT+AGG | - | chr8.1:46812860-46812879 | None:intergenic | 35.0% | |
| AGTTGAGCTTCAAAATGCAA+TGG | + | chr8.1:46813676-46813695 | MS.gene34650:CDS | 35.0% | |
| ATGTATTCTCAACTGCTTTG+TGG | + | chr8.1:46812578-46812597 | MS.gene34650:CDS | 35.0% | |
| CAACAATTGAAGACGAGTTA+GGG | + | chr8.1:46812309-46812328 | MS.gene34650:CDS | 35.0% | |
| CAATCTTCAAAAACACAAGG+TGG | - | chr8.1:46813833-46813852 | None:intergenic | 35.0% | |
| CACAATAACATCCACATACT+TGG | - | chr8.1:46812867-46812886 | None:intergenic | 35.0% | |
| CAGCAATCTTCAAAAACACA+AGG | - | chr8.1:46813836-46813855 | None:intergenic | 35.0% | |
| CATACAAATAATCCTTCCTC+TGG | + | chr8.1:46812004-46812023 | MS.gene34650:intron | 35.0% | |
| GACACAGTACAGTTTCATTT+GGG | - | chr8.1:46812541-46812560 | None:intergenic | 35.0% | |
| GAGATCAAGATTGTTGAACA+GGG | + | chr8.1:46813929-46813948 | MS.gene34650:CDS | 35.0% | |
| GTAGTAAAAATTCTTGGCAG+GGG | + | chr8.1:46812816-46812835 | MS.gene34650:CDS | 35.0% | |
| GTGTAGTAAAAATTCTTGGC+AGG | + | chr8.1:46812814-46812833 | MS.gene34650:CDS | 35.0% | |
| TACATGCTTTGGTATGAATC+AGG | - | chr8.1:46812563-46812582 | None:intergenic | 35.0% | |
| TAGTCCTAAATGTCCAAAGT+GGG | + | chr8.1:46814081-46814100 | MS.gene34650:CDS | 35.0% | |
| TATGTGGATGTTATTGTGAC+TGG | + | chr8.1:46812869-46812888 | MS.gene34650:CDS | 35.0% | |
| TCAACAATCTTGATCTCAAG+CGG | - | chr8.1:46813926-46813945 | None:intergenic | 35.0% | |
| TGAGATCAAGATTGTTGAAC+AGG | + | chr8.1:46813928-46813947 | MS.gene34650:CDS | 35.0% | |
| TGGTCTTTGTCAAAACAAAG+AGG | + | chr8.1:46812598-46812617 | MS.gene34650:CDS | 35.0% | |
| TGTTGAACTCTTGAACTCAA+GGG | + | chr8.1:46814042-46814061 | MS.gene34650:CDS | 35.0% | |
| TTAATCAGTACAAGACACCA+AGG | + | chr8.1:46813999-46814018 | MS.gene34650:CDS | 35.0% | |
| TTAGGTTCCTTGAGAAACAT+TGG | + | chr8.1:46812666-46812685 | MS.gene34650:CDS | 35.0% | |
| TTAGTCCTAAATGTCCAAAG+TGG | + | chr8.1:46814080-46814099 | MS.gene34650:CDS | 35.0% | |
| TTGCCTGTGAATAGAAGTAA+TGG | + | chr8.1:46813061-46813080 | MS.gene34650:CDS | 35.0% | |
| TTGTTGAACTCTTGAACTCA+AGG | + | chr8.1:46814041-46814060 | MS.gene34650:CDS | 35.0% | |
| TTTCTAAACCAGGAACAAAC+TGG | - | chr8.1:46812376-46812395 | None:intergenic | 35.0% | |
| ! | AAATCAGCAAGTTTAGGATC+AGG | - | chr8.1:46812782-46812801 | None:intergenic | 35.0% |
| ! | AGAGAACCTTTTGTTGAACT+TGG | - | chr8.1:46811771-46811790 | None:intergenic | 35.0% |
| ! | CAAGTTTAGGATCAGGTTTA+AGG | - | chr8.1:46812775-46812794 | None:intergenic | 35.0% |
| ! | GCTTCTAGTGAATGTTACTT+TGG | + | chr8.1:46812962-46812981 | MS.gene34650:CDS | 35.0% |
| ! | TAGTTTGTGTAAGGGTCATA+AGG | - | chr8.1:46812512-46812531 | None:intergenic | 35.0% |
| !! | GAACTTGTTGATGTCAAACT+TGG | + | chr8.1:46813145-46813164 | MS.gene34650:CDS | 35.0% |
| !!! | AACAAAGAGGTTTTAAGGGT+TGG | + | chr8.1:46812611-46812630 | MS.gene34650:CDS | 35.0% |
| !!! | AACAGGCAAGAGTTTTTTGA+AGG | - | chr8.1:46811869-46811888 | None:intergenic | 35.0% |
| !!! | AGAGTTTTTTGAAGGTGTCA+CGG | - | chr8.1:46811861-46811880 | None:intergenic | 35.0% |
| !!! | CTGGTTTTATAAGGGCTATT+AGG | + | chr8.1:46812648-46812667 | MS.gene34650:CDS | 35.0% |
| !!! | TGCTCAATACCACGTTTTTT+CGG | - | chr8.1:46813634-46813653 | None:intergenic | 35.0% |
| AGAGTGTAAGACACTTCACT+AGG | - | chr8.1:46813013-46813032 | None:intergenic | 40.0% | |
| AGGGGATAATTACTAGGCTT+TGG | + | chr8.1:46812834-46812853 | MS.gene34650:CDS | 40.0% | |
| ATAGCTAGTGTATTCGGACA+CGG | - | chr8.1:46813738-46813757 | None:intergenic | 40.0% | |
| CAGTGAGATAGACAGAATCA+CGG | - | chr8.1:46813427-46813446 | None:intergenic | 40.0% | |
| CCAACAATTGAAGACGAGTT+AGG | + | chr8.1:46812308-46812327 | MS.gene34650:CDS | 40.0% | |
| CCTAACTCGTCTTCAATTGT+TGG | - | chr8.1:46812311-46812330 | None:intergenic | 40.0% | |
| CCTGGTTTAGAAAAAGGGAA+AGG | + | chr8.1:46812383-46812402 | MS.gene34650:CDS | 40.0% | |
| CTAGTGAGAAACTCGGAAAT+GGG | - | chr8.1:46811967-46811986 | None:intergenic | 40.0% | |
| GAAGGTTCCAATGTTTCTCA+AGG | - | chr8.1:46812676-46812695 | None:intergenic | 40.0% | |
| GAGTTCAAGAGTTCAACAAC+AGG | - | chr8.1:46814040-46814059 | None:intergenic | 40.0% | |
| GATATTGACCGTATCTCCAA+TGG | + | chr8.1:46811913-46811932 | MS.gene34650:CDS | 40.0% | |
| GCAGTTGAGAATACATGCTT+TGG | - | chr8.1:46812574-46812593 | None:intergenic | 40.0% | |
| GCATACATAGTGCAAACAAG+TGG | - | chr8.1:46812944-46812963 | None:intergenic | 40.0% | |
| GGACACAGTACAGTTTCATT+TGG | - | chr8.1:46812542-46812561 | None:intergenic | 40.0% | |
| GTCTGCATAGCTAGTGTATT+CGG | - | chr8.1:46813744-46813763 | None:intergenic | 40.0% | |
| TAACATCCTCAATGAAGTCC+AGG | - | chr8.1:46811735-46811754 | None:intergenic | 40.0% | |
| TGAGAAAGAGCAGAAAGAGT+TGG | + | chr8.1:46813120-46813139 | MS.gene34650:CDS | 40.0% | |
| TTGATCCATTGCTTATGACC+AGG | - | chr8.1:46814109-46814128 | None:intergenic | 40.0% | |
| TTGGAGATACGGTCAATATC+AGG | - | chr8.1:46811913-46811932 | None:intergenic | 40.0% | |
| TTGGCCTAATACCAAGTATG+TGG | + | chr8.1:46812853-46812872 | MS.gene34650:CDS | 40.0% | |
| ! | AAATCTGAGGCTAAAACACC+TGG | + | chr8.1:46812425-46812444 | MS.gene34650:CDS | 40.0% |
| ! | ACTTCACTAGGTTGACAAAG+AGG | - | chr8.1:46813001-46813020 | None:intergenic | 40.0% |
| ! | CCTTTCCCTTTTTCTAAACC+AGG | - | chr8.1:46812386-46812405 | None:intergenic | 40.0% |
| ! | CTTCACTAGGTTGACAAAGA+GGG | - | chr8.1:46813000-46813019 | None:intergenic | 40.0% |
| ! | CTTGTTGTCACTACTTATGC+TGG | + | chr8.1:46813181-46813200 | MS.gene34650:CDS | 40.0% |
| ! | GGCTTGTGTAGTTTGTGTAA+GGG | - | chr8.1:46812520-46812539 | None:intergenic | 40.0% |
| ! | GGGCACTTTTGATAAGCTAA+TGG | + | chr8.1:46813949-46813968 | MS.gene34650:CDS | 40.0% |
| AGGTCACTATGTCCTCTACT+GGG | + | chr8.1:46813778-46813797 | MS.gene34650:CDS | 45.0% | |
| CAATTGAAGACGAGTTAGGG+AGG | + | chr8.1:46812312-46812331 | MS.gene34650:CDS | 45.0% | |
| CCACGTGATTGTAGCAATTG+AGG | - | chr8.1:46813321-46813340 | None:intergenic | 45.0% | |
| CCATTTCCGAGTTTCTCACT+AGG | + | chr8.1:46811965-46811984 | MS.gene34650:CDS | 45.0% | |
| CCTAGTGAGAAACTCGGAAA+TGG | - | chr8.1:46811968-46811987 | None:intergenic | 45.0% | |
| CCTCAATTGCTACAATCACG+TGG | + | chr8.1:46813318-46813337 | MS.gene34650:intron | 45.0% | |
| CGCTGACCAAGTTCAACAAA+AGG | + | chr8.1:46811762-46811781 | MS.gene34650:CDS | 45.0% | |
| CGGCACACAAAGTTGAATTG+TGG | - | chr8.1:46813614-46813633 | None:intergenic | 45.0% | |
| CTTGGCAGGGGATAATTACT+AGG | + | chr8.1:46812828-46812847 | MS.gene34650:CDS | 45.0% | |
| CTTTGTGTGCCGAAAAAACG+TGG | + | chr8.1:46813622-46813641 | MS.gene34650:CDS | 45.0% | |
| GACGAACCTAGTGAGAAACT+CGG | - | chr8.1:46811974-46811993 | None:intergenic | 45.0% | |
| GCAGACACAACAACAATTCC+AGG | + | chr8.1:46813758-46813777 | MS.gene34650:CDS | 45.0% | |
| TCAACAAGGTTGTAGCCTCT+AGG | - | chr8.1:46811697-46811716 | None:intergenic | 45.0% | |
| TTGAACTTGGTCAGCGTTTG+AGG | - | chr8.1:46811758-46811777 | None:intergenic | 45.0% | |
| ! | AGGTGTCACCATTGGAGATA+CGG | - | chr8.1:46811924-46811943 | None:intergenic | 45.0% |
| ! | ATGGGTTTGGAGCAAAGGAT+AGG | - | chr8.1:46811949-46811968 | None:intergenic | 45.0% |
| ! | GAGAAACTCGGAAATGGGTT+TGG | - | chr8.1:46811962-46811981 | None:intergenic | 45.0% |
| ! | GGGCTTGTGTAGTTTGTGTA+AGG | - | chr8.1:46812521-46812540 | None:intergenic | 45.0% |
| ! | TTTGGAGCAAAGGATAGGAG+AGG | - | chr8.1:46811944-46811963 | None:intergenic | 45.0% |
| CAACGTTTGCATTGCGAGAC+AGG | - | chr8.1:46811801-46811820 | None:intergenic | 50.0% | |
| CACCTGGTGGAATTGTAGCT+AGG | + | chr8.1:46812441-46812460 | MS.gene34650:CDS | 50.0% | |
| CAGGTCACTATGTCCTCTAC+TGG | + | chr8.1:46813777-46813796 | MS.gene34650:CDS | 50.0% | |
| CAGTAGAGGACATAGTGACC+TGG | - | chr8.1:46813779-46813798 | None:intergenic | 50.0% | |
| CCTTCAGCACATCACCAACA+CGG | - | chr8.1:46813568-46813587 | None:intergenic | 50.0% | |
| CGATAGATTTGTCCGAGACG+CGG | - | chr8.1:46813901-46813920 | None:intergenic | 50.0% | |
| CGCGTCTCGGACAAATCTAT+CGG | + | chr8.1:46813899-46813918 | MS.gene34650:CDS | 50.0% | |
| GCACATCACCAACACGGTAA+CGG | - | chr8.1:46813562-46813581 | None:intergenic | 50.0% | |
| GGACTATACCGTTACCGTGT+TGG | + | chr8.1:46813551-46813570 | MS.gene34650:intron | 50.0% | |
| GGAGCCCACTTTGGACATTT+AGG | - | chr8.1:46814088-46814107 | None:intergenic | 50.0% | |
| GGTGCAAACTTCACACACCT+TGG | - | chr8.1:46814019-46814038 | None:intergenic | 50.0% | |
| TCAGAGTGAGTTCCCAGTAG+AGG | - | chr8.1:46813793-46813812 | None:intergenic | 50.0% | |
| TTATGACCAGGAGCCCACTT+TGG | - | chr8.1:46814097-46814116 | None:intergenic | 50.0% | |
| ! | AAATGTCCAAAGTGGGCTCC+TGG | + | chr8.1:46814088-46814107 | MS.gene34650:CDS | 50.0% |
| ! | ACTCAACAGCGTGTATCGAC+AGG | + | chr8.1:46813874-46813893 | MS.gene34650:CDS | 50.0% |
| ! | CGGAAATGGGTTTGGAGCAA+AGG | - | chr8.1:46811954-46811973 | None:intergenic | 50.0% |
| ! | CTCAACAGCGTGTATCGACA+GGG | + | chr8.1:46813875-46813894 | MS.gene34650:CDS | 50.0% |
| ! | GGAACAAACTGGCTCATCAC+TGG | - | chr8.1:46812365-46812384 | None:intergenic | 50.0% |
| ! | GTGATGAGCCAGTTTGTTCC+TGG | + | chr8.1:46812365-46812384 | MS.gene34650:CDS | 50.0% |
| ! | TCTGAGGCTAAAACACCTGG+TGG | + | chr8.1:46812428-46812447 | MS.gene34650:CDS | 50.0% |
| !! | GATAGGAGAGGTGTCACCAT+TGG | - | chr8.1:46811932-46811951 | None:intergenic | 50.0% |
| !! | GTTGGTGCTGTATTTGCCTC+TGG | + | chr8.1:46812629-46812648 | MS.gene34650:CDS | 50.0% |
| !! | TTGTGCAGTTCTGGGACATC+TGG | + | chr8.1:46812266-46812285 | MS.gene34650:intron | 50.0% |
| GGCCTAGCTACAATTCCACC+AGG | - | chr8.1:46812446-46812465 | None:intergenic | 55.0% | |
| GGGCTCCTGGTCATAAGCAA+TGG | + | chr8.1:46814101-46814120 | MS.gene34650:CDS | 55.0% | |
| TCGGACACGGTTGCATCGAA+TGG | - | chr8.1:46813725-46813744 | None:intergenic | 55.0% | |
| TTGTAGCCTCTAGGTGCCTC+AGG | - | chr8.1:46811688-46811707 | None:intergenic | 55.0% | |
| !! | CCGTGTTGGTGATGTGCTGA+AGG | + | chr8.1:46813565-46813584 | MS.gene34650:CDS | 55.0% |
| !! | TGCAGTTCTGGGACATCTGG+AGG | + | chr8.1:46812269-46812288 | MS.gene34650:intron | 55.0% |
| GGTGATGTGCTGAAGGTCGC+TGG | + | chr8.1:46813572-46813591 | MS.gene34650:CDS | 60.0% | |
| ! | GTATCGACAGGGCCGCGTCT+CGG | + | chr8.1:46813886-46813905 | MS.gene34650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 46811682 | 46814138 | 46811682 | ID=MS.gene34650 |
| chr8.1 | mRNA | 46811682 | 46814138 | 46811682 | ID=MS.gene34650.t1;Parent=MS.gene34650 |
| chr8.1 | exon | 46811682 | 46811986 | 46811682 | ID=MS.gene34650.t1.exon1;Parent=MS.gene34650.t1 |
| chr8.1 | CDS | 46811682 | 46811986 | 46811682 | ID=cds.MS.gene34650.t1;Parent=MS.gene34650.t1 |
| chr8.1 | exon | 46812274 | 46813202 | 46812274 | ID=MS.gene34650.t1.exon2;Parent=MS.gene34650.t1 |
| chr8.1 | CDS | 46812274 | 46813202 | 46812274 | ID=cds.MS.gene34650.t1;Parent=MS.gene34650.t1 |
| chr8.1 | exon | 46813552 | 46814138 | 46813552 | ID=MS.gene34650.t1.exon3;Parent=MS.gene34650.t1 |
| chr8.1 | CDS | 46813552 | 46814138 | 46813552 | ID=cds.MS.gene34650.t1;Parent=MS.gene34650.t1 |
| Gene Sequence |
| Protein sequence |
