Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045936.t1 | XP_013445678.1 | 99.7 | 606 | 2 | 0 | 1 | 606 | 1 | 606 | 0.00E+00 | 1236.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045936.t1 | Q9LSQ4 | 80.8 | 609 | 110 | 1 | 1 | 602 | 1 | 609 | 6.2e-300 | 1030.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045936.t1 | A0A072TQB1 | 99.7 | 606 | 2 | 0 | 1 | 606 | 1 | 606 | 0.0e+00 | 1236.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59583 | MS.gene045936 | PPI |
| MS.gene045936 | MS.gene95299 | PPI |
| MS.gene045936 | MS.gene024458 | PPI |
| MS.gene36841 | MS.gene045936 | PPI |
| MS.gene045936 | MS.gene000373 | PPI |
| MS.gene045936 | MS.gene79751 | PPI |
| MS.gene045936 | MS.gene99230 | PPI |
| MS.gene045936 | MS.gene34650 | PPI |
| MS.gene045936 | MS.gene22809 | PPI |
| MS.gene045936 | MS.gene78774 | PPI |
| MS.gene045936 | MS.gene86023 | PPI |
| MS.gene95295 | MS.gene045936 | PPI |
| MS.gene045936 | MS.gene046366 | PPI |
| MS.gene050633 | MS.gene045936 | PPI |
| MS.gene045936 | MS.gene59582 | PPI |
| MS.gene045936 | MS.gene053964 | PPI |
| MS.gene25516 | MS.gene045936 | PPI |
| MS.gene045936 | MS.gene41352 | PPI |
| MS.gene045936 | MS.gene025922 | PPI |
| MS.gene045936 | MS.gene95297 | PPI |
| MS.gene045936 | MS.gene79749 | PPI |
| MS.gene045936 | MS.gene43375 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045936.t1 | MTR_8g467000 | 99.670 | 606 | 2 | 0 | 1 | 606 | 1 | 606 | 0.0 | 1254 |
| MS.gene045936.t1 | MTR_2g081860 | 80.865 | 601 | 112 | 2 | 8 | 605 | 7 | 607 | 0.0 | 1018 |
| MS.gene045936.t1 | MTR_4g045903 | 69.839 | 620 | 158 | 6 | 1 | 602 | 1 | 609 | 0.0 | 909 |
| MS.gene045936.t1 | MTR_0035s0150 | 63.636 | 594 | 198 | 3 | 4 | 597 | 9 | 584 | 0.0 | 803 |
| MS.gene045936.t1 | MTR_5g016320 | 62.755 | 588 | 208 | 3 | 16 | 601 | 22 | 600 | 0.0 | 777 |
| MS.gene045936.t1 | MTR_1g088765 | 53.000 | 600 | 267 | 6 | 7 | 597 | 3 | 596 | 0.0 | 642 |
| MS.gene045936.t1 | MTR_1g088765 | 55.022 | 458 | 193 | 5 | 147 | 597 | 1 | 452 | 1.70e-179 | 515 |
| MS.gene045936.t1 | MTR_8g027970 | 36.700 | 594 | 348 | 7 | 1 | 589 | 1 | 571 | 1.25e-131 | 397 |
| MS.gene045936.t1 | MTR_8g027965 | 36.615 | 579 | 345 | 7 | 15 | 589 | 11 | 571 | 2.49e-131 | 397 |
| MS.gene045936.t1 | MTR_8g027955 | 36.097 | 579 | 348 | 7 | 15 | 589 | 18 | 578 | 2.56e-131 | 397 |
| MS.gene045936.t1 | MTR_8g027920 | 35.456 | 581 | 349 | 8 | 15 | 589 | 11 | 571 | 7.99e-128 | 388 |
| MS.gene045936.t1 | MTR_7g117110 | 36.442 | 579 | 348 | 10 | 16 | 589 | 12 | 575 | 1.19e-127 | 387 |
| MS.gene045936.t1 | MTR_0102s0060 | 34.983 | 586 | 359 | 7 | 15 | 589 | 19 | 593 | 4.34e-126 | 384 |
| MS.gene045936.t1 | MTR_7g117110 | 35.162 | 401 | 248 | 6 | 16 | 414 | 12 | 402 | 1.20e-79 | 258 |
| MS.gene045936.t1 | MTR_7g094190 | 29.897 | 582 | 375 | 14 | 14 | 579 | 4 | 568 | 4.19e-75 | 250 |
| MS.gene045936.t1 | MTR_7g094190 | 32.170 | 401 | 249 | 8 | 188 | 579 | 82 | 468 | 9.11e-62 | 212 |
| MS.gene045936.t1 | MTR_8g037720 | 34.604 | 341 | 182 | 7 | 255 | 589 | 126 | 431 | 6.52e-61 | 209 |
| MS.gene045936.t1 | MTR_8g037720 | 40.404 | 99 | 59 | 0 | 16 | 114 | 3 | 101 | 4.93e-17 | 84.3 |
| MS.gene045936.t1 | MTR_1g047730 | 38.290 | 269 | 139 | 5 | 324 | 589 | 114 | 358 | 6.33e-53 | 185 |
| MS.gene045936.t1 | MTR_3g023280 | 53.211 | 109 | 49 | 1 | 491 | 597 | 19 | 127 | 3.36e-30 | 115 |
| MS.gene045936.t1 | MTR_7g094330 | 30.769 | 234 | 122 | 4 | 188 | 420 | 82 | 276 | 3.80e-30 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045936.t1 | AT5G54510 | 80.788 | 609 | 110 | 1 | 1 | 602 | 1 | 609 | 0.0 | 1046 |
| MS.gene045936.t1 | AT4G27260 | 80.131 | 609 | 114 | 1 | 1 | 602 | 1 | 609 | 0.0 | 1041 |
| MS.gene045936.t1 | AT2G14960 | 63.333 | 600 | 199 | 3 | 4 | 601 | 9 | 589 | 0.0 | 798 |
| MS.gene045936.t1 | AT4G37390 | 62.626 | 594 | 210 | 5 | 12 | 601 | 18 | 603 | 0.0 | 785 |
| MS.gene045936.t1 | AT2G23170 | 61.960 | 602 | 210 | 6 | 4 | 601 | 9 | 595 | 0.0 | 772 |
| MS.gene045936.t1 | AT1G59500 | 59.832 | 595 | 219 | 6 | 12 | 601 | 18 | 597 | 0.0 | 736 |
| MS.gene045936.t1 | AT1G28130 | 56.757 | 592 | 243 | 8 | 18 | 597 | 14 | 604 | 0.0 | 699 |
| MS.gene045936.t1 | AT2G47750 | 52.203 | 590 | 264 | 8 | 14 | 597 | 8 | 585 | 0.0 | 615 |
| MS.gene045936.t1 | AT1G23160 | 48.983 | 590 | 274 | 5 | 9 | 589 | 6 | 577 | 0.0 | 580 |
| MS.gene045936.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 88 | 663 | 0.0 | 573 |
| MS.gene045936.t1 | AT5G13370 | 48.900 | 591 | 279 | 8 | 14 | 595 | 10 | 586 | 0.0 | 573 |
| MS.gene045936.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 10 | 585 | 0.0 | 572 |
| MS.gene045936.t1 | AT5G13360 | 49.239 | 591 | 276 | 7 | 14 | 595 | 10 | 585 | 0.0 | 572 |
| MS.gene045936.t1 | AT1G28130 | 59.653 | 461 | 176 | 6 | 147 | 597 | 1 | 461 | 0.0 | 565 |
| MS.gene045936.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 15 | 574 | 0.0 | 564 |
| MS.gene045936.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 30 | 589 | 0.0 | 564 |
| MS.gene045936.t1 | AT5G13320 | 47.834 | 577 | 276 | 4 | 21 | 589 | 15 | 574 | 0.0 | 564 |
| MS.gene045936.t1 | AT5G13380 | 46.678 | 587 | 289 | 8 | 18 | 595 | 44 | 615 | 0.0 | 549 |
| MS.gene045936.t1 | AT5G13350 | 46.701 | 591 | 292 | 7 | 15 | 596 | 11 | 587 | 0.0 | 544 |
| MS.gene045936.t1 | AT5G13350 | 46.701 | 591 | 292 | 7 | 15 | 596 | 11 | 587 | 0.0 | 544 |
| MS.gene045936.t1 | AT1G48660 | 44.560 | 579 | 299 | 5 | 21 | 593 | 10 | 572 | 0.0 | 524 |
| MS.gene045936.t1 | AT5G51470 | 45.927 | 577 | 291 | 4 | 19 | 591 | 14 | 573 | 4.27e-180 | 522 |
| MS.gene045936.t1 | AT1G48660 | 44.714 | 577 | 298 | 5 | 21 | 593 | 10 | 569 | 6.56e-180 | 521 |
| MS.gene045936.t1 | AT1G48670 | 43.772 | 578 | 253 | 7 | 21 | 593 | 11 | 521 | 1.79e-160 | 470 |
| MS.gene045936.t1 | AT5G51470 | 45.272 | 497 | 252 | 3 | 99 | 591 | 3 | 483 | 2.76e-148 | 437 |
| MS.gene045936.t1 | AT1G48670 | 50.236 | 424 | 192 | 3 | 174 | 593 | 2 | 410 | 1.95e-145 | 427 |
| MS.gene045936.t1 | AT2G46370 | 38.554 | 581 | 330 | 11 | 16 | 589 | 12 | 572 | 2.82e-133 | 402 |
| MS.gene045936.t1 | AT2G46370 | 38.554 | 581 | 330 | 11 | 16 | 589 | 12 | 572 | 2.82e-133 | 402 |
| MS.gene045936.t1 | AT2G46370 | 37.919 | 596 | 338 | 12 | 6 | 589 | 8 | 583 | 2.95e-133 | 402 |
| MS.gene045936.t1 | AT4G03400 | 34.701 | 585 | 362 | 5 | 17 | 589 | 11 | 587 | 7.93e-122 | 373 |
| MS.gene045936.t1 | AT4G03400 | 34.701 | 585 | 362 | 5 | 17 | 589 | 11 | 587 | 7.93e-122 | 373 |
| MS.gene045936.t1 | AT2G46370 | 38.943 | 511 | 287 | 9 | 84 | 589 | 3 | 493 | 1.71e-116 | 356 |
| MS.gene045936.t1 | AT1G48690 | 38.919 | 185 | 109 | 2 | 21 | 205 | 10 | 190 | 1.55e-38 | 140 |
Find 116 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACAGTATATTCCTATTT+TGG | 0.111812 | 8.3:+43955737 | MS.gene045936:CDS |
| GGAGCCCACTTTGGACATTT+AGG | 0.154824 | 8.3:-43956923 | None:intergenic |
| CAAGTTTAGGATCAGGTTTA+AGG | 0.254241 | 8.3:-43955611 | None:intergenic |
| TTTGTTCCTGGTTTAGAAAA+AGG | 0.255175 | 8.3:+43955216 | MS.gene045936:CDS |
| ACTGTTGAGTCAGTAATTAA+AGG | 0.285053 | 8.3:-43955567 | None:intergenic |
| ATGGATTATGCCATTAGTTT+AGG | 0.291005 | 8.3:+43956806 | MS.gene045936:CDS |
| TGGATAAAATCAGCAAGTTT+AGG | 0.292869 | 8.3:-43955624 | None:intergenic |
| TTGCTATAATGATCCAAAAT+AGG | 0.297088 | 8.3:-43955750 | None:intergenic |
| GAGCCCACTTTGGACATTTA+GGG | 0.311971 | 8.3:-43956922 | None:intergenic |
| ATAAGGTCTATCTCTAAAAT+AGG | 0.318744 | 8.3:-43955331 | None:intergenic |
| GTGATGAGCCAGTTTGTTCC+TGG | 0.324174 | 8.3:+43955204 | MS.gene045936:CDS |
| GGACACAGTACAGTTTCATT+TGG | 0.346171 | 8.3:-43955378 | None:intergenic |
| CCAACAATTGAAGACGAGTT+AGG | 0.350482 | 8.3:+43955147 | MS.gene045936:CDS |
| TGAGATCAAGATTGTTGAAC+AGG | 0.353995 | 8.3:+43956766 | MS.gene045936:CDS |
| CCTAACTCGTCTTCAATTGT+TGG | 0.355115 | 8.3:-43955147 | None:intergenic |
| CTTGGCAGGGGATAATTACT+AGG | 0.356717 | 8.3:+43955667 | MS.gene045936:CDS |
| CTGTTGAGTCAGTAATTAAA+GGG | 0.358960 | 8.3:-43955566 | None:intergenic |
| TTGTGCAGTTCTGGGACATC+TGG | 0.365207 | 8.3:+43955105 | MS.gene045936:intron |
| TTGTAATAGCTAGTTAAAAC+TGG | 0.369819 | 8.3:-43955303 | None:intergenic |
| TCTTTCTCATTAAGAGATCT+AGG | 0.375377 | 8.3:-43955945 | None:intergenic |
| ATATCTTCATATGAAATAAC+AGG | 0.377500 | 8.3:-43954718 | None:intergenic |
| GGGCTTGTGTAGTTTGTGTA+AGG | 0.378276 | 8.3:-43955357 | None:intergenic |
| AGGGGATAATTACTAGGCTT+TGG | 0.396785 | 8.3:+43955673 | MS.gene045936:CDS |
| CCTAGTGAGAAACTCGGAAA+TGG | 0.402657 | 8.3:-43954800 | None:intergenic |
| GAGAAACTCGGAAATGGGTT+TGG | 0.402818 | 8.3:-43954794 | None:intergenic |
| CTTTGCAATGATATTAGAAC+TGG | 0.408730 | 8.3:+43955534 | MS.gene045936:CDS |
| GACACAGTACAGTTTCATTT+GGG | 0.411007 | 8.3:-43955377 | None:intergenic |
| ATGTATTCTCAACTGCTTTG+TGG | 0.413819 | 8.3:+43955417 | MS.gene045936:CDS |
| TTGAACTTGGTCAGCGTTTG+AGG | 0.418697 | 8.3:-43954590 | None:intergenic |
| AAATCAGCAAGTTTAGGATC+AGG | 0.419446 | 8.3:-43955618 | None:intergenic |
| TTTCTAAACCAGGAACAAAC+TGG | 0.423901 | 8.3:-43955212 | None:intergenic |
| TTGGAGATACGGTCAATATC+AGG | 0.424900 | 8.3:-43954745 | None:intergenic |
| ACATCCACATACTTAGTATT+AGG | 0.428267 | 8.3:-43955696 | None:intergenic |
| TACATGCTTTGGTATGAATC+AGG | 0.429558 | 8.3:-43955399 | None:intergenic |
| CAGGTCACTATGTCCTCTAC+TGG | 0.430139 | 8.3:+43956615 | MS.gene045936:CDS |
| AATTGAAGCACCTAAACTAA+TGG | 0.431562 | 8.3:-43956816 | None:intergenic |
| GCAGTTGAGAATACATGCTT+TGG | 0.432411 | 8.3:-43955410 | None:intergenic |
| GCTTCTAGTGAATGTTACTT+TGG | 0.432831 | 8.3:+43955801 | MS.gene045936:CDS |
| GTCTGCATAGCTAGTGTATT+CGG | 0.433199 | 8.3:-43956579 | None:intergenic |
| GCAGACACAACAACAATTCC+AGG | 0.444605 | 8.3:+43956596 | MS.gene045936:CDS |
| CCGAGTTGGTGATGTGTTGA+AGG | 0.465454 | 8.3:+43956403 | MS.gene045936:CDS |
| TTCTAATATCATTGCAAAGA+AGG | 0.466795 | 8.3:-43955530 | None:intergenic |
| GGTGATGTGTTGAAGGTAGC+TGG | 0.472026 | 8.3:+43956410 | MS.gene045936:CDS |
| CAACAATTGAAGACGAGTTA+GGG | 0.472679 | 8.3:+43955148 | MS.gene045936:CDS |
| AAATGTCCAAAGTGGGCTCC+TGG | 0.483198 | 8.3:+43956926 | MS.gene045936:CDS |
| TTAGGTTCCTTGAGAAACAT+TGG | 0.484372 | 8.3:+43955505 | MS.gene045936:CDS |
| ACTCAACAGCGTGTATCGAC+AGG | 0.486087 | 8.3:+43956712 | MS.gene045936:CDS |
| TTGTAGCCTCTAGGTGCCTC+AGG | 0.487179 | 8.3:-43954520 | None:intergenic |
| TAGTTTGTGTAAGGGTCATA+AGG | 0.487342 | 8.3:-43955348 | None:intergenic |
| TGAGAAAGAGCAGAAAGAGT+TGG | 0.487483 | 8.3:+43955959 | MS.gene045936:CDS |
| CGCTGACCAAGTTCAACAAA+AGG | 0.497019 | 8.3:+43954597 | MS.gene045936:CDS |
| GCCTCTAGGTGCCTCAGGCA+TGG | 0.502602 | 8.3:-43954515 | None:intergenic |
| CGGAAATGGGTTTGGAGCAA+AGG | 0.507191 | 8.3:-43954786 | None:intergenic |
| CTAGTGAGAAACTCGGAAAT+GGG | 0.511635 | 8.3:-43954799 | None:intergenic |
| TAACATCCTCAATGAAGTCC+AGG | 0.517548 | 8.3:-43954567 | None:intergenic |
| CTTGTTGTCACTACTTATGC+TGG | 0.517694 | 8.3:+43956020 | MS.gene045936:CDS |
| GTATCGACAGGGCCGCGTCT+CGG | 0.517767 | 8.3:+43956724 | MS.gene045936:CDS |
| AGGTGTCACCATTGGAGATA+CGG | 0.520760 | 8.3:-43954756 | None:intergenic |
| CTTAAAAGATATGATCTCAA+TGG | 0.521709 | 8.3:+43954661 | MS.gene045936:CDS |
| GAGTTCAAGAGTTCAACAAC+AGG | 0.523704 | 8.3:-43956875 | None:intergenic |
| GGACTATACCGTTACCGAGT+TGG | 0.523842 | 8.3:+43956389 | MS.gene045936:intron |
| GGAACAAACTGGCTCATCAC+TGG | 0.525232 | 8.3:-43955201 | None:intergenic |
| GATAGGAGAGGTGTCACCAT+TGG | 0.527208 | 8.3:-43954764 | None:intergenic |
| TATGTGGATGTTATTGTGAC+TGG | 0.529295 | 8.3:+43955708 | MS.gene045936:CDS |
| ATGGGTTTGGAGCAAAGGAT+AGG | 0.537304 | 8.3:-43954781 | None:intergenic |
| GGCTTGTGTAGTTTGTGTAA+GGG | 0.539250 | 8.3:-43955356 | None:intergenic |
| TCTAATATCATTGCAAAGAA+GGG | 0.539557 | 8.3:-43955529 | None:intergenic |
| TTGTTGAACTCTTGAACTCA+AGG | 0.540254 | 8.3:+43956879 | MS.gene045936:CDS |
| TCGGACACGGTTGCATCGAA+TGG | 0.543360 | 8.3:-43956560 | None:intergenic |
| CCATTTCCGAGTTTCTCACT+AGG | 0.547573 | 8.3:+43954800 | MS.gene045936:CDS |
| CGCGTCTCGGACAAATCTAT+CGG | 0.552359 | 8.3:+43956737 | MS.gene045936:CDS |
| GAACTTGTTGATGTCAAACT+TGG | 0.554297 | 8.3:+43955984 | MS.gene045936:CDS |
| TTATGACCAGGAGCCCACTT+TGG | 0.554897 | 8.3:-43956932 | None:intergenic |
| TTGGCCTAATACTAAGTATG+TGG | 0.556473 | 8.3:+43955692 | MS.gene045936:CDS |
| GGGCTCCTGGTCATAAGCAA+TGG | 0.566694 | 8.3:+43956939 | MS.gene045936:CDS |
| GAAGGGTCCAATGTTTCTCA+AGG | 0.568529 | 8.3:-43955512 | None:intergenic |
| TGCAGTTCTGGGACATCTGG+AGG | 0.569833 | 8.3:+43955108 | MS.gene045936:intron |
| ACTTCACTAGGTTGACAAAG+AGG | 0.571857 | 8.3:-43955837 | None:intergenic |
| CTTCACTAGGTTGACAAAGA+GGG | 0.573620 | 8.3:-43955836 | None:intergenic |
| ACACCATTACTTCTATTCAC+AGG | 0.573990 | 8.3:-43955903 | None:intergenic |
| TTGCCTGTGAATAGAAGTAA+TGG | 0.577251 | 8.3:+43955900 | MS.gene045936:CDS |
| TGGTCTTTGTCAAAACAAAG+AGG | 0.579177 | 8.3:+43955437 | MS.gene045936:CDS |
| TTGATCCATTGCTTATGACC+AGG | 0.582743 | 8.3:-43956944 | None:intergenic |
| AATTCAAAGTAGCACATGGT+AGG | 0.583971 | 8.3:-43955876 | None:intergenic |
| TCAGAGTGAGTTCCCAGTAG+AGG | 0.584102 | 8.3:-43956628 | None:intergenic |
| GGTGCAAACTTCACACACCT+TGG | 0.586326 | 8.3:-43956854 | None:intergenic |
| CCTAATGTTTATAAAATCTG+AGG | 0.588832 | 8.3:+43955251 | MS.gene045936:CDS |
| TCAACAAGGTTGTAGCCTCT+AGG | 0.591413 | 8.3:-43954529 | None:intergenic |
| GATATTGACCGTATCTCCAA+TGG | 0.593412 | 8.3:+43954748 | MS.gene045936:CDS |
| TGTTGAACTCTTGAACTCAA+GGG | 0.593725 | 8.3:+43956880 | MS.gene045936:CDS |
| TCAACAATCTTGATCTCAAG+CGG | 0.595363 | 8.3:-43956761 | None:intergenic |
| AAATCTGAGGCTAAAACACC+TGG | 0.603615 | 8.3:+43955264 | MS.gene045936:CDS |
| CAGTAGAGGACATAGTGACC+TGG | 0.605308 | 8.3:-43956614 | None:intergenic |
| CCTTCAACACATCACCAACT+CGG | 0.608774 | 8.3:-43956403 | None:intergenic |
| CACCTGGTGGAATTGTAGCT+AGG | 0.610611 | 8.3:+43955280 | MS.gene045936:CDS |
| AGGTCACTATGTCCTCTACT+GGG | 0.614973 | 8.3:+43956616 | MS.gene045936:CDS |
| CGGCACACGAAGTTGAATTG+CGG | 0.616034 | 8.3:-43956449 | None:intergenic |
| GGCCTAGCTACAATTCCACC+AGG | 0.617990 | 8.3:-43955282 | None:intergenic |
| GCATACATAGTGCAAACAAG+TGG | 0.618340 | 8.3:-43955780 | None:intergenic |
| TTTGGAGCAAAGGATAGGAG+AGG | 0.620341 | 8.3:-43954776 | None:intergenic |
| TCTGAGGCTAAAACACCTGG+TGG | 0.620910 | 8.3:+43955267 | MS.gene045936:CDS |
| ACACATCACCAACTCGGTAA+CGG | 0.631028 | 8.3:-43956397 | None:intergenic |
| CTCAACAGCGTGTATCGACA+GGG | 0.631957 | 8.3:+43956713 | MS.gene045936:CDS |
| CGATAGATTTGTCCGAGACG+CGG | 0.631989 | 8.3:-43956736 | None:intergenic |
| TAGCCCTAAATGTCCAAAGT+GGG | 0.635686 | 8.3:+43956919 | MS.gene045936:CDS |
| CAATTGAAGACGAGTTAGGG+AGG | 0.639368 | 8.3:+43955151 | MS.gene045936:CDS |
| AGTTGAGCTTCAAAATGCAA+TGG | 0.645898 | 8.3:+43956514 | MS.gene045936:CDS |
| TTAGCCCTAAATGTCCAAAG+TGG | 0.647825 | 8.3:+43956918 | MS.gene045936:CDS |
| AACAACACACACCATGCCTG+AGG | 0.659606 | 8.3:+43954504 | None:intergenic |
| GACGAACCTAGTGAGAAACT+CGG | 0.661604 | 8.3:-43954806 | None:intergenic |
| AATAGCCCTTATAAAACCAG+AGG | 0.675707 | 8.3:-43955484 | None:intergenic |
| ATAGCTAGTGTATTCGGACA+CGG | 0.679053 | 8.3:-43956573 | None:intergenic |
| GAGATCAAGATTGTTGAACA+GGG | 0.686060 | 8.3:+43956767 | MS.gene045936:CDS |
| AGAGTGTAAGACACTTCACT+AGG | 0.687486 | 8.3:-43955849 | None:intergenic |
| TTAATCAGTACAAGACACCA+AGG | 0.718724 | 8.3:+43956837 | MS.gene045936:CDS |
| ACCATGCCTGAGGCACCTAG+AGG | 0.728145 | 8.3:+43954514 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAATTAAATTAAAAGTT+TGG | - | chr8.3:43956094-43956113 | None:intergenic | 10.0% |
| !!! | TCTAACTTTTTCTTATATAA+AGG | + | chr8.3:43954945-43954964 | MS.gene045936:intron | 15.0% |
| !! | ATATCTTCATATGAAATAAC+AGG | - | chr8.3:43954721-43954740 | None:intergenic | 20.0% |
| !! | TCATCAAAAGTTAATGTATA+TGG | + | chr8.3:43954885-43954904 | MS.gene045936:intron | 20.0% |
| !! | TTTATATATGTTACTCTCTT+TGG | - | chr8.3:43954972-43954991 | None:intergenic | 20.0% |
| !!! | ATGTAAGTGGTTTTAAATTT+TGG | - | chr8.3:43954912-43954931 | None:intergenic | 20.0% |
| !!! | TGTTTGTCAATTTTTTTCTT+AGG | + | chr8.3:43956368-43956387 | MS.gene045936:intron | 20.0% |
| ! | CCTAATGTTTATAAAATCTG+AGG | + | chr8.3:43955251-43955270 | MS.gene045936:CDS | 25.0% |
| ! | CTTAAAAGATATGATCTCAA+TGG | + | chr8.3:43954661-43954680 | MS.gene045936:CDS | 25.0% |
| ! | TCTAATATCATTGCAAAGAA+GGG | - | chr8.3:43955532-43955551 | None:intergenic | 25.0% |
| ! | TTCTAATATCATTGCAAAGA+AGG | - | chr8.3:43955533-43955552 | None:intergenic | 25.0% |
| ! | TTCTATATATTAGACAAGGT+TGG | + | chr8.3:43954862-43954881 | MS.gene045936:intron | 25.0% |
| ! | TTGCTATAATGATCCAAAAT+AGG | - | chr8.3:43955753-43955772 | None:intergenic | 25.0% |
| ! | TTGTAATAGCTAGTTAAAAC+TGG | - | chr8.3:43955306-43955325 | None:intergenic | 25.0% |
| !! | AATTTTTACTACACTCAGTT+TGG | - | chr8.3:43955647-43955666 | None:intergenic | 25.0% |
| !! | ATTTTGGATCATTATAGCAA+TGG | + | chr8.3:43955753-43955772 | MS.gene045936:CDS | 25.0% |
| !! | CCTCAGATTTTATAAACATT+AGG | - | chr8.3:43955254-43955273 | None:intergenic | 25.0% |
| !!! | AAATTTATTTTGTGCAGTTC+TGG | + | chr8.3:43955096-43955115 | MS.gene045936:intron | 25.0% |
| !!! | AATTTATTTTGTGCAGTTCT+GGG | + | chr8.3:43955097-43955116 | MS.gene045936:intron | 25.0% |
| !!! | ATAAGGTCTATCTCTAAAAT+AGG | - | chr8.3:43955334-43955353 | None:intergenic | 25.0% |
| !!! | TCAAAACAAAGAGGTTTTAA+GGG | + | chr8.3:43955446-43955465 | MS.gene045936:CDS | 25.0% |
| !!! | TTTTTTGAACTGCTATTGAT+GGG | + | chr8.3:43955057-43955076 | MS.gene045936:intron | 25.0% |
| !!! | TTTTTTTGAACTGCTATTGA+TGG | + | chr8.3:43955056-43955075 | MS.gene045936:intron | 25.0% |
| !!! | TTTTTTTGTTCTGTTCAACA+AGG | - | chr8.3:43954546-43954565 | None:intergenic | 25.0% |
| ACATCCACATACTTAGTATT+AGG | - | chr8.3:43955699-43955718 | None:intergenic | 30.0% | |
| ACTGTTGAGTCAGTAATTAA+AGG | - | chr8.3:43955570-43955589 | None:intergenic | 30.0% | |
| CAAAAATTCAAAGTAGCACA+TGG | - | chr8.3:43955883-43955902 | None:intergenic | 30.0% | |
| CCTTGTCTAATATATAGAAC+CGG | - | chr8.3:43954861-43954880 | None:intergenic | 30.0% | |
| CTGAGTGTAGTAAAAATTCT+TGG | + | chr8.3:43955649-43955668 | MS.gene045936:CDS | 30.0% | |
| CTGTTGAGTCAGTAATTAAA+GGG | - | chr8.3:43955569-43955588 | None:intergenic | 30.0% | |
| CTTTGCAATGATATTAGAAC+TGG | + | chr8.3:43955534-43955553 | MS.gene045936:CDS | 30.0% | |
| TCAACAAATGTTGATGTAAG+TGG | - | chr8.3:43954925-43954944 | None:intergenic | 30.0% | |
| TCTTTCTCATTAAGAGATCT+AGG | - | chr8.3:43955948-43955967 | None:intergenic | 30.0% | |
| TGAACAGAACAAAAAAATCC+TGG | + | chr8.3:43954549-43954568 | MS.gene045936:CDS | 30.0% | |
| TGGATAAAATCAGCAAGTTT+AGG | - | chr8.3:43955627-43955646 | None:intergenic | 30.0% | |
| TGTAGTAAAAATTCTTGGCA+GGG | + | chr8.3:43955654-43955673 | MS.gene045936:CDS | 30.0% | |
| TGTGTAACTGTAAACAGATT+TGG | + | chr8.3:43956303-43956322 | MS.gene045936:intron | 30.0% | |
| TTGTTCCTGGTTTAGAAAAA+GGG | + | chr8.3:43955217-43955236 | MS.gene045936:CDS | 30.0% | |
| TTTGTTCCTGGTTTAGAAAA+AGG | + | chr8.3:43955216-43955235 | MS.gene045936:CDS | 30.0% | |
| ! | AATTGAAGCACCTAAACTAA+TGG | - | chr8.3:43956819-43956838 | None:intergenic | 30.0% |
| ! | ATGGATTATGCCATTAGTTT+AGG | + | chr8.3:43956806-43956825 | MS.gene045936:CDS | 30.0% |
| ! | GTCAAAACAAAGAGGTTTTA+AGG | + | chr8.3:43955445-43955464 | MS.gene045936:CDS | 30.0% |
| ! | GTCACAGTATATTCCTATTT+TGG | + | chr8.3:43955737-43955756 | MS.gene045936:CDS | 30.0% |
| !!! | AGAGTTTTTTGAAAGTGTCA+CGG | - | chr8.3:43954696-43954715 | None:intergenic | 30.0% |
| !!! | TGCTCAATACCACATTTTTT+CGG | - | chr8.3:43956472-43956491 | None:intergenic | 30.0% |
| !!! | TTTTGCCTCTGGTTTTATAA+GGG | + | chr8.3:43955479-43955498 | MS.gene045936:CDS | 30.0% |
| !!! | TTTTTGCCTCTGGTTTTATA+AGG | + | chr8.3:43955478-43955497 | MS.gene045936:CDS | 30.0% |
| AAAAATCCTGGACTTCATTG+AGG | + | chr8.3:43954561-43954580 | MS.gene045936:CDS | 35.0% | |
| AATAGCCCTTATAAAACCAG+AGG | - | chr8.3:43955487-43955506 | None:intergenic | 35.0% | |
| AATTCAAAGTAGCACATGGT+AGG | - | chr8.3:43955879-43955898 | None:intergenic | 35.0% | |
| ACACCATTACTTCTATTCAC+AGG | - | chr8.3:43955906-43955925 | None:intergenic | 35.0% | |
| AGTTGAGCTTCAAAATGCAA+TGG | + | chr8.3:43956514-43956533 | MS.gene045936:CDS | 35.0% | |
| ATGTATTCTCAACTGCTTTG+TGG | + | chr8.3:43955417-43955436 | MS.gene045936:CDS | 35.0% | |
| CAACAATTGAAGACGAGTTA+GGG | + | chr8.3:43955148-43955167 | MS.gene045936:CDS | 35.0% | |
| CAATCTTCAAAAACACAAGG+TGG | - | chr8.3:43956671-43956690 | None:intergenic | 35.0% | |
| CAGCAATCTTCAAAAACACA+AGG | - | chr8.3:43956674-43956693 | None:intergenic | 35.0% | |
| CATACAAATAATCCTTCCTC+CGG | + | chr8.3:43954839-43954858 | MS.gene045936:intron | 35.0% | |
| CCGGTTCTATATATTAGACA+AGG | + | chr8.3:43954858-43954877 | MS.gene045936:intron | 35.0% | |
| GACACAGTACAGTTTCATTT+GGG | - | chr8.3:43955380-43955399 | None:intergenic | 35.0% | |
| GAGATCAAGATTGTTGAACA+GGG | + | chr8.3:43956767-43956786 | MS.gene045936:CDS | 35.0% | |
| GTAGTAAAAATTCTTGGCAG+GGG | + | chr8.3:43955655-43955674 | MS.gene045936:CDS | 35.0% | |
| GTGTAGTAAAAATTCTTGGC+AGG | + | chr8.3:43955653-43955672 | MS.gene045936:CDS | 35.0% | |
| TAATATATAGAACCGGAGGA+AGG | - | chr8.3:43954854-43954873 | None:intergenic | 35.0% | |
| TACATGCTTTGGTATGAATC+AGG | - | chr8.3:43955402-43955421 | None:intergenic | 35.0% | |
| TATGTGGATGTTATTGTGAC+TGG | + | chr8.3:43955708-43955727 | MS.gene045936:CDS | 35.0% | |
| TCAACAATCTTGATCTCAAG+CGG | - | chr8.3:43956764-43956783 | None:intergenic | 35.0% | |
| TGAGATCAAGATTGTTGAAC+AGG | + | chr8.3:43956766-43956785 | MS.gene045936:CDS | 35.0% | |
| TGGTCTTTGTCAAAACAAAG+AGG | + | chr8.3:43955437-43955456 | MS.gene045936:CDS | 35.0% | |
| TGTCTAATATATAGAACCGG+AGG | - | chr8.3:43954858-43954877 | None:intergenic | 35.0% | |
| TGTTGAACTCTTGAACTCAA+GGG | + | chr8.3:43956880-43956899 | MS.gene045936:CDS | 35.0% | |
| TTAATCAGTACAAGACACCA+AGG | + | chr8.3:43956837-43956856 | MS.gene045936:CDS | 35.0% | |
| TTAGGTTCCTTGAGAAACAT+TGG | + | chr8.3:43955505-43955524 | MS.gene045936:CDS | 35.0% | |
| TTGCCTGTGAATAGAAGTAA+TGG | + | chr8.3:43955900-43955919 | MS.gene045936:CDS | 35.0% | |
| TTGGCCTAATACTAAGTATG+TGG | + | chr8.3:43955692-43955711 | MS.gene045936:CDS | 35.0% | |
| TTGTTGAACTCTTGAACTCA+AGG | + | chr8.3:43956879-43956898 | MS.gene045936:CDS | 35.0% | |
| TTTCTAAACCAGGAACAAAC+TGG | - | chr8.3:43955215-43955234 | None:intergenic | 35.0% | |
| ! | AAATCAGCAAGTTTAGGATC+AGG | - | chr8.3:43955621-43955640 | None:intergenic | 35.0% |
| ! | AGAGAACCTTTTGTTGAACT+TGG | - | chr8.3:43954606-43954625 | None:intergenic | 35.0% |
| ! | CAAGTTTAGGATCAGGTTTA+AGG | - | chr8.3:43955614-43955633 | None:intergenic | 35.0% |
| ! | GCTTCTAGTGAATGTTACTT+TGG | + | chr8.3:43955801-43955820 | MS.gene045936:CDS | 35.0% |
| ! | TAGTTTGTGTAAGGGTCATA+AGG | - | chr8.3:43955351-43955370 | None:intergenic | 35.0% |
| !! | GAACTTGTTGATGTCAAACT+TGG | + | chr8.3:43955984-43956003 | MS.gene045936:CDS | 35.0% |
| !!! | AACAAAGAGGTTTTAAGGGT+TGG | + | chr8.3:43955450-43955469 | MS.gene045936:CDS | 35.0% |
| !!! | CTGGTTTTATAAGGGCTATT+AGG | + | chr8.3:43955487-43955506 | MS.gene045936:CDS | 35.0% |
| AGAGTGTAAGACACTTCACT+AGG | - | chr8.3:43955852-43955871 | None:intergenic | 40.0% | |
| AGGGGATAATTACTAGGCTT+TGG | + | chr8.3:43955673-43955692 | MS.gene045936:CDS | 40.0% | |
| ATAGCTAGTGTATTCGGACA+CGG | - | chr8.3:43956576-43956595 | None:intergenic | 40.0% | |
| CAGTGAGATAGACAGAATCA+CGG | - | chr8.3:43956264-43956283 | None:intergenic | 40.0% | |
| CCAACAATTGAAGACGAGTT+AGG | + | chr8.3:43955147-43955166 | MS.gene045936:CDS | 40.0% | |
| CCTAACTCGTCTTCAATTGT+TGG | - | chr8.3:43955150-43955169 | None:intergenic | 40.0% | |
| CCTGGTTTAGAAAAAGGGAA+AGG | + | chr8.3:43955222-43955241 | MS.gene045936:CDS | 40.0% | |
| CTAGTGAGAAACTCGGAAAT+GGG | - | chr8.3:43954802-43954821 | None:intergenic | 40.0% | |
| GAGTTCAAGAGTTCAACAAC+AGG | - | chr8.3:43956878-43956897 | None:intergenic | 40.0% | |
| GATATTGACCGTATCTCCAA+TGG | + | chr8.3:43954748-43954767 | MS.gene045936:CDS | 40.0% | |
| GCAGTTGAGAATACATGCTT+TGG | - | chr8.3:43955413-43955432 | None:intergenic | 40.0% | |
| GCATACATAGTGCAAACAAG+TGG | - | chr8.3:43955783-43955802 | None:intergenic | 40.0% | |
| GGACACAGTACAGTTTCATT+TGG | - | chr8.3:43955381-43955400 | None:intergenic | 40.0% | |
| GTCTGCATAGCTAGTGTATT+CGG | - | chr8.3:43956582-43956601 | None:intergenic | 40.0% | |
| TAACATCCTCAATGAAGTCC+AGG | - | chr8.3:43954570-43954589 | None:intergenic | 40.0% | |
| TAGCCCTAAATGTCCAAAGT+GGG | + | chr8.3:43956919-43956938 | MS.gene045936:CDS | 40.0% | |
| TGAGAAAGAGCAGAAAGAGT+TGG | + | chr8.3:43955959-43955978 | MS.gene045936:CDS | 40.0% | |
| TTAGCCCTAAATGTCCAAAG+TGG | + | chr8.3:43956918-43956937 | MS.gene045936:CDS | 40.0% | |
| TTGATCCATTGCTTATGACC+AGG | - | chr8.3:43956947-43956966 | None:intergenic | 40.0% | |
| TTGGAGATACGGTCAATATC+AGG | - | chr8.3:43954748-43954767 | None:intergenic | 40.0% | |
| ! | AAATCTGAGGCTAAAACACC+TGG | + | chr8.3:43955264-43955283 | MS.gene045936:CDS | 40.0% |
| ! | ACTTCACTAGGTTGACAAAG+AGG | - | chr8.3:43955840-43955859 | None:intergenic | 40.0% |
| ! | CCTTTCCCTTTTTCTAAACC+AGG | - | chr8.3:43955225-43955244 | None:intergenic | 40.0% |
| ! | CTTCACTAGGTTGACAAAGA+GGG | - | chr8.3:43955839-43955858 | None:intergenic | 40.0% |
| ! | CTTGTTGTCACTACTTATGC+TGG | + | chr8.3:43956020-43956039 | MS.gene045936:CDS | 40.0% |
| ! | GGCTTGTGTAGTTTGTGTAA+GGG | - | chr8.3:43955359-43955378 | None:intergenic | 40.0% |
| ! | GGGCACTTTTGATAAGCTAA+TGG | + | chr8.3:43956787-43956806 | MS.gene045936:CDS | 40.0% |
| ACACATCACCAACTCGGTAA+CGG | - | chr8.3:43956400-43956419 | None:intergenic | 45.0% | |
| AGGTCACTATGTCCTCTACT+GGG | + | chr8.3:43956616-43956635 | MS.gene045936:CDS | 45.0% | |
| CAATTGAAGACGAGTTAGGG+AGG | + | chr8.3:43955151-43955170 | MS.gene045936:CDS | 45.0% | |
| CCACGTGATTGTAGCAATTG+AGG | - | chr8.3:43956158-43956177 | None:intergenic | 45.0% | |
| CCATTTCCGAGTTTCTCACT+AGG | + | chr8.3:43954800-43954819 | MS.gene045936:CDS | 45.0% | |
| CCTAGTGAGAAACTCGGAAA+TGG | - | chr8.3:43954803-43954822 | None:intergenic | 45.0% | |
| CCTCAATTGCTACAATCACG+TGG | + | chr8.3:43956155-43956174 | MS.gene045936:intron | 45.0% | |
| CCTTCAACACATCACCAACT+CGG | - | chr8.3:43956406-43956425 | None:intergenic | 45.0% | |
| CGCTGACCAAGTTCAACAAA+AGG | + | chr8.3:43954597-43954616 | MS.gene045936:CDS | 45.0% | |
| CTTCGTGTGCCGAAAAAATG+TGG | + | chr8.3:43956460-43956479 | MS.gene045936:CDS | 45.0% | |
| CTTGGCAGGGGATAATTACT+AGG | + | chr8.3:43955667-43955686 | MS.gene045936:CDS | 45.0% | |
| GAAGGGTCCAATGTTTCTCA+AGG | - | chr8.3:43955515-43955534 | None:intergenic | 45.0% | |
| GACGAACCTAGTGAGAAACT+CGG | - | chr8.3:43954809-43954828 | None:intergenic | 45.0% | |
| GAGCCCACTTTGGACATTTA+GGG | - | chr8.3:43956925-43956944 | None:intergenic | 45.0% | |
| GCAGACACAACAACAATTCC+AGG | + | chr8.3:43956596-43956615 | MS.gene045936:CDS | 45.0% | |
| TCAACAAGGTTGTAGCCTCT+AGG | - | chr8.3:43954532-43954551 | None:intergenic | 45.0% | |
| TTGAACTTGGTCAGCGTTTG+AGG | - | chr8.3:43954593-43954612 | None:intergenic | 45.0% | |
| ! | AGGTGTCACCATTGGAGATA+CGG | - | chr8.3:43954759-43954778 | None:intergenic | 45.0% |
| ! | ATGGGTTTGGAGCAAAGGAT+AGG | - | chr8.3:43954784-43954803 | None:intergenic | 45.0% |
| ! | GAGAAACTCGGAAATGGGTT+TGG | - | chr8.3:43954797-43954816 | None:intergenic | 45.0% |
| ! | GGGCTTGTGTAGTTTGTGTA+AGG | - | chr8.3:43955360-43955379 | None:intergenic | 45.0% |
| ! | TTTGGAGCAAAGGATAGGAG+AGG | - | chr8.3:43954779-43954798 | None:intergenic | 45.0% |
| CACCTGGTGGAATTGTAGCT+AGG | + | chr8.3:43955280-43955299 | MS.gene045936:CDS | 50.0% | |
| CAGGTCACTATGTCCTCTAC+TGG | + | chr8.3:43956615-43956634 | MS.gene045936:CDS | 50.0% | |
| CAGTAGAGGACATAGTGACC+TGG | - | chr8.3:43956617-43956636 | None:intergenic | 50.0% | |
| CGATAGATTTGTCCGAGACG+CGG | - | chr8.3:43956739-43956758 | None:intergenic | 50.0% | |
| CGCGTCTCGGACAAATCTAT+CGG | + | chr8.3:43956737-43956756 | MS.gene045936:CDS | 50.0% | |
| CGGCACACGAAGTTGAATTG+CGG | - | chr8.3:43956452-43956471 | None:intergenic | 50.0% | |
| GGACTATACCGTTACCGAGT+TGG | + | chr8.3:43956389-43956408 | MS.gene045936:intron | 50.0% | |
| GGAGCCCACTTTGGACATTT+AGG | - | chr8.3:43956926-43956945 | None:intergenic | 50.0% | |
| GGTGATGTGTTGAAGGTAGC+TGG | + | chr8.3:43956410-43956429 | MS.gene045936:CDS | 50.0% | |
| GGTGCAAACTTCACACACCT+TGG | - | chr8.3:43956857-43956876 | None:intergenic | 50.0% | |
| TCAGAGTGAGTTCCCAGTAG+AGG | - | chr8.3:43956631-43956650 | None:intergenic | 50.0% | |
| TTATGACCAGGAGCCCACTT+TGG | - | chr8.3:43956935-43956954 | None:intergenic | 50.0% | |
| ! | AAATGTCCAAAGTGGGCTCC+TGG | + | chr8.3:43956926-43956945 | MS.gene045936:CDS | 50.0% |
| ! | ACTCAACAGCGTGTATCGAC+AGG | + | chr8.3:43956712-43956731 | MS.gene045936:CDS | 50.0% |
| ! | CGGAAATGGGTTTGGAGCAA+AGG | - | chr8.3:43954789-43954808 | None:intergenic | 50.0% |
| ! | CTCAACAGCGTGTATCGACA+GGG | + | chr8.3:43956713-43956732 | MS.gene045936:CDS | 50.0% |
| ! | GGAACAAACTGGCTCATCAC+TGG | - | chr8.3:43955204-43955223 | None:intergenic | 50.0% |
| ! | GTGATGAGCCAGTTTGTTCC+TGG | + | chr8.3:43955204-43955223 | MS.gene045936:CDS | 50.0% |
| ! | TCTGAGGCTAAAACACCTGG+TGG | + | chr8.3:43955267-43955286 | MS.gene045936:CDS | 50.0% |
| !! | CCGAGTTGGTGATGTGTTGA+AGG | + | chr8.3:43956403-43956422 | MS.gene045936:CDS | 50.0% |
| !! | GATAGGAGAGGTGTCACCAT+TGG | - | chr8.3:43954767-43954786 | None:intergenic | 50.0% |
| !! | TTGTGCAGTTCTGGGACATC+TGG | + | chr8.3:43955105-43955124 | MS.gene045936:intron | 50.0% |
| !!! | GTTGGTGCTGTTTTTGCCTC+TGG | + | chr8.3:43955468-43955487 | MS.gene045936:CDS | 50.0% |
| GGCCTAGCTACAATTCCACC+AGG | - | chr8.3:43955285-43955304 | None:intergenic | 55.0% | |
| GGGCTCCTGGTCATAAGCAA+TGG | + | chr8.3:43956939-43956958 | MS.gene045936:CDS | 55.0% | |
| TCGGACACGGTTGCATCGAA+TGG | - | chr8.3:43956563-43956582 | None:intergenic | 55.0% | |
| TTGTAGCCTCTAGGTGCCTC+AGG | - | chr8.3:43954523-43954542 | None:intergenic | 55.0% | |
| !! | TGCAGTTCTGGGACATCTGG+AGG | + | chr8.3:43955108-43955127 | MS.gene045936:intron | 55.0% |
| ! | GTATCGACAGGGCCGCGTCT+CGG | + | chr8.3:43956724-43956743 | MS.gene045936:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 43954517 | 43956976 | 43954517 | ID=MS.gene045936 |
| chr8.3 | mRNA | 43954517 | 43956976 | 43954517 | ID=MS.gene045936.t1;Parent=MS.gene045936 |
| chr8.3 | exon | 43954517 | 43954821 | 43954517 | ID=MS.gene045936.t1.exon1;Parent=MS.gene045936.t1 |
| chr8.3 | CDS | 43954517 | 43954821 | 43954517 | ID=cds.MS.gene045936.t1;Parent=MS.gene045936.t1 |
| chr8.3 | exon | 43955113 | 43956041 | 43955113 | ID=MS.gene045936.t1.exon2;Parent=MS.gene045936.t1 |
| chr8.3 | CDS | 43955113 | 43956041 | 43955113 | ID=cds.MS.gene045936.t1;Parent=MS.gene045936.t1 |
| chr8.3 | exon | 43956390 | 43956976 | 43956390 | ID=MS.gene045936.t1.exon3;Parent=MS.gene045936.t1 |
| chr8.3 | CDS | 43956390 | 43956976 | 43956390 | ID=cds.MS.gene045936.t1;Parent=MS.gene045936.t1 |
| Gene Sequence |
| Protein sequence |
