Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000759.t1 | XP_013443336.1 | 98.8 | 172 | 2 | 0 | 1 | 172 | 1 | 172 | 1.80E-91 | 345.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000759.t1 | Q9XH44 | 75.0 | 172 | 42 | 1 | 2 | 172 | 3 | 174 | 5.3e-71 | 268.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000759.t1 | G7ZV36 | 98.8 | 172 | 2 | 0 | 1 | 172 | 1 | 172 | 1.3e-91 | 345.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000759 | MS.gene042580 | PPI |
| MS.gene62616 | MS.gene000759 | PPI |
| MS.gene000759 | MS.gene51913 | PPI |
| MS.gene000759 | MS.gene040147 | PPI |
| MS.gene000759 | MS.gene93778 | PPI |
| MS.gene94652 | MS.gene000759 | PPI |
| MS.gene000759 | MS.gene35397 | PPI |
| MS.gene000759 | MS.gene95893 | PPI |
| MS.gene000759 | MS.gene51950 | PPI |
| MS.gene000759 | MS.gene43049 | PPI |
| MS.gene000759 | MS.gene034467 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000759.t1 | MTR_0020s0120 | 98.837 | 172 | 2 | 0 | 1 | 172 | 1 | 172 | 9.48e-125 | 348 |
| MS.gene000759.t1 | MTR_0020s0120 | 94.767 | 172 | 2 | 1 | 1 | 172 | 1 | 165 | 1.83e-116 | 327 |
| MS.gene000759.t1 | MTR_7g104460 | 70.833 | 168 | 48 | 1 | 6 | 172 | 7 | 174 | 1.19e-87 | 254 |
| MS.gene000759.t1 | MTR_2g086270 | 66.474 | 173 | 57 | 1 | 1 | 172 | 1 | 173 | 1.00e-86 | 252 |
| MS.gene000759.t1 | MTR_1g060190 | 62.264 | 159 | 58 | 1 | 6 | 162 | 7 | 165 | 2.71e-75 | 223 |
| MS.gene000759.t1 | MTR_7g084970 | 59.036 | 166 | 68 | 0 | 7 | 172 | 8 | 173 | 1.70e-73 | 218 |
| MS.gene000759.t1 | MTR_6g033040 | 57.485 | 167 | 71 | 0 | 6 | 172 | 7 | 173 | 1.36e-68 | 206 |
| MS.gene000759.t1 | MTR_7g006690 | 56.140 | 171 | 74 | 1 | 3 | 172 | 4 | 174 | 4.87e-67 | 202 |
| MS.gene000759.t1 | MTR_7g085020 | 57.831 | 166 | 70 | 0 | 7 | 172 | 9 | 174 | 1.54e-66 | 201 |
| MS.gene000759.t1 | MTR_7g006630 | 56.213 | 169 | 73 | 1 | 5 | 172 | 1 | 169 | 2.49e-66 | 200 |
| MS.gene000759.t1 | MTR_8g106840 | 53.757 | 173 | 78 | 2 | 1 | 172 | 2 | 173 | 5.11e-64 | 194 |
| MS.gene000759.t1 | MTR_7g085040 | 51.786 | 168 | 77 | 2 | 5 | 172 | 6 | 169 | 8.91e-59 | 181 |
| MS.gene000759.t1 | MTR_5g078320 | 46.575 | 73 | 38 | 1 | 100 | 171 | 16 | 88 | 1.05e-16 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000759.t1 | AT5G62040 | 68.391 | 174 | 53 | 2 | 1 | 172 | 1 | 174 | 3.08e-85 | 248 |
| MS.gene000759.t1 | AT2G27550 | 69.822 | 169 | 49 | 2 | 6 | 172 | 7 | 175 | 6.39e-83 | 242 |
| MS.gene000759.t1 | AT5G03840 | 62.791 | 172 | 63 | 1 | 2 | 172 | 6 | 177 | 3.26e-81 | 238 |
| MS.gene000759.t1 | AT1G65480 | 62.874 | 167 | 62 | 0 | 6 | 172 | 7 | 173 | 1.86e-76 | 226 |
| MS.gene000759.t1 | AT1G65480 | 62.874 | 167 | 62 | 0 | 6 | 172 | 51 | 217 | 3.11e-76 | 227 |
| MS.gene000759.t1 | AT4G20370 | 58.084 | 167 | 70 | 0 | 6 | 172 | 7 | 173 | 3.07e-68 | 205 |
| MS.gene000759.t1 | AT1G18100 | 52.299 | 174 | 80 | 2 | 1 | 172 | 1 | 173 | 7.02e-62 | 189 |
Find 44 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCTAGTGATCCACATTTA+AGG | 0.192828 | 6.4:+34150865 | MS.gene000759:CDS |
| ATTTACAATGTCTAGGCATT+TGG | 0.294305 | 6.4:+34149862 | None:intergenic |
| TGGATTCCAATCACTGGCTT+TGG | 0.338572 | 6.4:-34151455 | None:intergenic |
| GGTACCACAGATGTCTCTTT+TGG | 0.356770 | 6.4:+34151019 | MS.gene000759:CDS |
| TCACTAGGACTAGGAGCATC+TGG | 0.365823 | 6.4:-34150852 | None:intergenic |
| GGCTTGTTCATAACAATAGA+AGG | 0.369931 | 6.4:-34149998 | None:intergenic |
| CATGAGATCTGCTTATACTT+TGG | 0.378259 | 6.4:+34150045 | MS.gene000759:CDS |
| ACAAGATGAAGACATATCTA+TGG | 0.389834 | 6.4:-34151475 | None:intergenic |
| AACAAGCCAAGGGTTGATAT+TGG | 0.406612 | 6.4:+34150013 | MS.gene000759:CDS |
| TCCTAGTGATCCACATTTAA+GGG | 0.415346 | 6.4:+34150866 | MS.gene000759:CDS |
| CTTTCTGTAGGAAGAGTGAT+TGG | 0.436842 | 6.4:+34149890 | MS.gene000759:CDS |
| GAGAATCCAAAGCCAGTGAT+TGG | 0.439509 | 6.4:+34151449 | MS.gene000759:CDS |
| TTGAAGTAAACTGCAGCAAC+AGG | 0.458327 | 6.4:-34151590 | None:intergenic |
| ATGACCATTTGCAACTTGCT+TGG | 0.464272 | 6.4:-34149966 | None:intergenic |
| GTCACATTCATTCTTACACT+TGG | 0.469107 | 6.4:-34149935 | None:intergenic |
| GAGAAACTGCAGCAAGAAGA+AGG | 0.491502 | 6.4:+34151621 | MS.gene000759:CDS |
| ACCATTTGCAACTTGCTTGG+TGG | 0.494743 | 6.4:-34149963 | None:intergenic |
| ATCACTCTTCCTACAGAAAG+TGG | 0.502508 | 6.4:-34149887 | None:intergenic |
| TTGAAATTGTCTCTAGAAGA+TGG | 0.510509 | 6.4:-34151530 | None:intergenic |
| TTCTCACAGGAGAATAACCT+TGG | 0.519597 | 6.4:+34151563 | MS.gene000759:CDS |
| CTATTGTTATGAACAAGCCA+AGG | 0.525548 | 6.4:+34150002 | MS.gene000759:CDS |
| TCCACCAAGCAAGTTGCAAA+TGG | 0.526204 | 6.4:+34149962 | MS.gene000759:CDS |
| CATTGTGATTTACAATGTCT+AGG | 0.539949 | 6.4:+34149855 | None:intergenic |
| TCATCTTGTTCAAGCAGAGA+AGG | 0.540166 | 6.4:+34151489 | MS.gene000759:CDS |
| TGAAATTGTCTCTAGAAGAT+GGG | 0.541509 | 6.4:-34151529 | None:intergenic |
| AAATGTGGATCACTAGGACT+AGG | 0.546629 | 6.4:-34150861 | None:intergenic |
| CACTAGGACTAGGAGCATCT+GGG | 0.555253 | 6.4:-34150851 | None:intergenic |
| AGGATGGTTACAGATATTCC+AGG | 0.555677 | 6.4:+34150998 | MS.gene000759:intron |
| AAAGAGACATCTGTGGTACC+TGG | 0.563172 | 6.4:-34151016 | None:intergenic |
| AAGCCAAGGGTTGATATTGG+CGG | 0.564130 | 6.4:+34150016 | MS.gene000759:CDS |
| CAACACAAGGAGATTCTCAC+AGG | 0.564893 | 6.4:+34151550 | MS.gene000759:CDS |
| TCACCGCCAATATCAACCCT+TGG | 0.569065 | 6.4:-34150019 | None:intergenic |
| TATCTATGGATTCCAATCAC+TGG | 0.569156 | 6.4:-34151461 | None:intergenic |
| ATTTAAGGGAACATCTCCAC+TGG | 0.572031 | 6.4:+34150880 | MS.gene000759:CDS |
| CATTTGGAACCACTTTCTGT+AGG | 0.583166 | 6.4:+34149878 | MS.gene000759:CDS |
| TATTGTTATGAACAAGCCAA+GGG | 0.586275 | 6.4:+34150003 | MS.gene000759:CDS |
| CTAGAGACAATTTCAACACA+AGG | 0.589107 | 6.4:+34151537 | MS.gene000759:CDS |
| TCCCTTAAATGTGGATCACT+AGG | 0.597152 | 6.4:-34150867 | None:intergenic |
| TGGAGATGTTCCCTTAAATG+TGG | 0.614063 | 6.4:-34150876 | None:intergenic |
| GAAATTGTCTCTAGAAGATG+GGG | 0.619592 | 6.4:-34151528 | None:intergenic |
| TGATGCAGGAAATGAGATTG+TGG | 0.645531 | 6.4:+34151421 | MS.gene000759:intron |
| AAGGGTTGATATTGGCGGTG+AGG | 0.670278 | 6.4:+34150021 | MS.gene000759:CDS |
| CTGCAGCAACAGGTAAACCA+AGG | 0.708296 | 6.4:-34151580 | None:intergenic |
| CTAACCAAAAGAGACATCTG+TGG | 0.754543 | 6.4:-34151023 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr6.4:34150519-34150538 | MS.gene000759:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr6.4:34150538-34150519 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6.4:34150520-34150539 | MS.gene000759:intron | 0.0% |
| !! | AGTAAAAAAAATATAACAAA+AGG | + | chr6.4:34150312-34150331 | MS.gene000759:intron | 10.0% |
| !! | ATATAGAGAATAATTAATTA+AGG | - | chr6.4:34151078-34151097 | None:intergenic | 10.0% |
| !! | AAAAAATATAACAAAAGGTA+AGG | + | chr6.4:34150317-34150336 | MS.gene000759:intron | 15.0% |
| !! | ATGTAACTTAATTAAAAGAA+TGG | + | chr6.4:34151361-34151380 | MS.gene000759:intron | 15.0% |
| !! | GGAAATAAACATATTAATAA+AGG | - | chr6.4:34150192-34150211 | None:intergenic | 15.0% |
| !!! | ATAACCAATGTTTTAAAAAT+CGG | - | chr6.4:34150476-34150495 | None:intergenic | 15.0% |
| !! | ATGATTAATATACCAAATGA+TGG | + | chr6.4:34150808-34150827 | MS.gene000759:intron | 20.0% |
| !! | ATTAATAAAGGTTGTTAGTT+AGG | - | chr6.4:34150180-34150199 | None:intergenic | 20.0% |
| !! | TAATTTATTACATATGTGCA+TGG | + | chr6.4:34151210-34151229 | MS.gene000759:intron | 20.0% |
| !! | TATATATATATTCATGTCTC+AGG | - | chr6.4:34150510-34150529 | None:intergenic | 20.0% |
| !!! | ATTACGATTGTAACTTATTT+TGG | - | chr6.4:34150394-34150413 | None:intergenic | 20.0% |
| !!! | TCTCTATATTTGTTAATCTA+AGG | + | chr6.4:34151089-34151108 | MS.gene000759:intron | 20.0% |
| !!! | TTTTAAAACATTGGTTATAG+TGG | + | chr6.4:34150478-34150497 | MS.gene000759:intron | 20.0% |
| ! | ATTAAGGTTATATTGATCCT+AGG | - | chr6.4:34151062-34151081 | None:intergenic | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | - | chr6.4:34150666-34150685 | None:intergenic | 25.0% |
| ! | TGAAAATGTTAAAATCCTCA+TGG | - | chr6.4:34151190-34151209 | None:intergenic | 25.0% |
| ! | TTAAACAACTTGAGTTCAAT+TGG | + | chr6.4:34151156-34151175 | MS.gene000759:intron | 25.0% |
| ! | TTACATGTATGGTTGTAAAA+AGG | - | chr6.4:34151326-34151345 | None:intergenic | 25.0% |
| !!! | AGTTTTATTATACAAACCAG+TGG | - | chr6.4:34150899-34150918 | None:intergenic | 25.0% |
| !!! | TCATTTTTTTTCTCACTAGA+AGG | - | chr6.4:34150273-34150292 | None:intergenic | 25.0% |
| ACAAGATGAAGACATATCTA+TGG | - | chr6.4:34151478-34151497 | None:intergenic | 30.0% | |
| ATTGTTTGAACTAACTGGTT+CGG | + | chr6.4:34150449-34150468 | MS.gene000759:intron | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr6.4:34150685-34150704 | MS.gene000759:intron | 30.0% | |
| GATCTACAAATTCCATCATT+TGG | - | chr6.4:34150823-34150842 | None:intergenic | 30.0% | |
| TACTTCGCTAATGTAACATA+TGG | - | chr6.4:34150131-34150150 | None:intergenic | 30.0% | |
| TATTGTTATGAACAAGCCAA+GGG | + | chr6.4:34150003-34150022 | MS.gene000759:CDS | 30.0% | |
| TGTGATGCAATTTACATGTA+TGG | - | chr6.4:34151337-34151356 | None:intergenic | 30.0% | |
| TTAAATCCTCAAGTTCTTAG+TGG | - | chr6.4:34151140-34151159 | None:intergenic | 30.0% | |
| TTGCTAAAAGACACCTTTAT+GGG | - | chr6.4:34150621-34150640 | None:intergenic | 30.0% | |
| ! | TACATTAGCGAAGTATCAAT+CGG | + | chr6.4:34150136-34150155 | MS.gene000759:intron | 30.0% |
| ! | TGAAATTGTCTCTAGAAGAT+GGG | - | chr6.4:34151532-34151551 | None:intergenic | 30.0% |
| ! | TTGAAATTGTCTCTAGAAGA+TGG | - | chr6.4:34151533-34151552 | None:intergenic | 30.0% |
| !!! | CCAAATCACGTTTTTTATCA+CGG | + | chr6.4:34150210-34150229 | MS.gene000759:intron | 30.0% |
| !!! | GTAACTTATTTTGGTTGAAG+TGG | - | chr6.4:34150385-34150404 | None:intergenic | 30.0% |
| CAATTGGAAAATCAACCATG+AGG | + | chr6.4:34151172-34151191 | MS.gene000759:intron | 35.0% | |
| CATGAGATCTGCTTATACTT+TGG | + | chr6.4:34150045-34150064 | MS.gene000759:CDS | 35.0% | |
| CCGTGATAAAAAACGTGATT+TGG | - | chr6.4:34150213-34150232 | None:intergenic | 35.0% | |
| CTAGAGACAATTTCAACACA+AGG | + | chr6.4:34151537-34151556 | MS.gene000759:CDS | 35.0% | |
| CTATTGTTATGAACAAGCCA+AGG | + | chr6.4:34150002-34150021 | MS.gene000759:CDS | 35.0% | |
| CTTGCTAAAAGACACCTTTA+TGG | - | chr6.4:34150622-34150641 | None:intergenic | 35.0% | |
| GCGTAATTGTTTGAACTAAC+TGG | + | chr6.4:34150444-34150463 | MS.gene000759:intron | 35.0% | |
| GTCACATTCATTCTTACACT+TGG | - | chr6.4:34149938-34149957 | None:intergenic | 35.0% | |
| GTTAGTTCAAACAATTACGC+AGG | - | chr6.4:34150444-34150463 | None:intergenic | 35.0% | |
| TATCTATGGATTCCAATCAC+TGG | - | chr6.4:34151464-34151483 | None:intergenic | 35.0% | |
| TCCTAGTGATCCACATTTAA+GGG | + | chr6.4:34150866-34150885 | MS.gene000759:CDS | 35.0% | |
| TTTATTCCCTCTTACCAACT+TGG | + | chr6.4:34150960-34150979 | MS.gene000759:intron | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | - | chr6.4:34150698-34150717 | None:intergenic | 35.0% |
| ! | CTTTTACCACTAAGAACTTG+AGG | + | chr6.4:34151131-34151150 | MS.gene000759:intron | 35.0% |
| ! | GAAATTGTCTCTAGAAGATG+GGG | - | chr6.4:34151531-34151550 | None:intergenic | 35.0% |
| ! | GCAAATTGATGATACCAAGT+TGG | - | chr6.4:34150977-34150996 | None:intergenic | 35.0% |
| ! | GGCTTGTTCATAACAATAGA+AGG | - | chr6.4:34150001-34150020 | None:intergenic | 35.0% |
| !! | ATGATACCAAGTTGGTAAGA+GGG | - | chr6.4:34150969-34150988 | None:intergenic | 35.0% |
| !!! | CGGTCCGATTTTTAAAACAT+TGG | + | chr6.4:34150469-34150488 | MS.gene000759:intron | 35.0% |
| AAAGTGGAAATCACACCTTG+AGG | - | chr6.4:34150650-34150669 | None:intergenic | 40.0% | |
| AAATGTGGATCACTAGGACT+AGG | - | chr6.4:34150864-34150883 | None:intergenic | 40.0% | |
| AAGGGAGTTAACTTTGATGC+AGG | + | chr6.4:34151407-34151426 | MS.gene000759:intron | 40.0% | |
| AGGATGGTTACAGATATTCC+AGG | + | chr6.4:34150998-34151017 | MS.gene000759:intron | 40.0% | |
| ATCACTCTTCCTACAGAAAG+TGG | - | chr6.4:34149890-34149909 | None:intergenic | 40.0% | |
| ATTGATCCTAGGATAGAGAG+AGG | - | chr6.4:34151051-34151070 | None:intergenic | 40.0% | |
| ATTTAAGGGAACATCTCCAC+TGG | + | chr6.4:34150880-34150899 | MS.gene000759:CDS | 40.0% | |
| CTAAAAGACACCTTTATGGG+TGG | - | chr6.4:34150618-34150637 | None:intergenic | 40.0% | |
| CTAACCAAAAGAGACATCTG+TGG | - | chr6.4:34151026-34151045 | None:intergenic | 40.0% | |
| CTTGGTATCATCAATTTGCC+AGG | + | chr6.4:34150978-34150997 | MS.gene000759:intron | 40.0% | |
| CTTTCTGTAGGAAGAGTGAT+TGG | + | chr6.4:34149890-34149909 | MS.gene000759:CDS | 40.0% | |
| GTATCATCAATTTGCCAGGA+TGG | + | chr6.4:34150982-34151001 | MS.gene000759:intron | 40.0% | |
| GTCCTAGTGATCCACATTTA+AGG | + | chr6.4:34150865-34150884 | MS.gene000759:CDS | 40.0% | |
| TCATCTTGTTCAAGCAGAGA+AGG | + | chr6.4:34151489-34151508 | MS.gene000759:CDS | 40.0% | |
| TCCCTTAAATGTGGATCACT+AGG | - | chr6.4:34150870-34150889 | None:intergenic | 40.0% | |
| TGATGCAGGAAATGAGATTG+TGG | + | chr6.4:34151421-34151440 | MS.gene000759:intron | 40.0% | |
| TGGAATATCTGTAACCATCC+TGG | - | chr6.4:34150999-34151018 | None:intergenic | 40.0% | |
| TGGAGATGTTCCCTTAAATG+TGG | - | chr6.4:34150879-34150898 | None:intergenic | 40.0% | |
| TTCTCACAGGAGAATAACCT+TGG | + | chr6.4:34151563-34151582 | MS.gene000759:CDS | 40.0% | |
| TTGAAGTAAACTGCAGCAAC+AGG | - | chr6.4:34151593-34151612 | None:intergenic | 40.0% | |
| TTGATCCTAGGATAGAGAGA+GGG | - | chr6.4:34151050-34151069 | None:intergenic | 40.0% | |
| ! | ATCAATCGGCTTTGACGATT+TGG | + | chr6.4:34150150-34150169 | MS.gene000759:intron | 40.0% |
| ! | ATGACCATTTGCAACTTGCT+TGG | - | chr6.4:34149969-34149988 | None:intergenic | 40.0% |
| ! | CATTTGGAACCACTTTCTGT+AGG | + | chr6.4:34149878-34149897 | MS.gene000759:CDS | 40.0% |
| ! | TGGTTGAAGTGGATTTAACC+AGG | - | chr6.4:34150374-34150393 | None:intergenic | 40.0% |
| !! | AACAAGCCAAGGGTTGATAT+TGG | + | chr6.4:34150013-34150032 | MS.gene000759:CDS | 40.0% |
| !! | GATGATACCAAGTTGGTAAG+AGG | - | chr6.4:34150970-34150989 | None:intergenic | 40.0% |
| AAAGAGACATCTGTGGTACC+TGG | - | chr6.4:34151019-34151038 | None:intergenic | 45.0% | |
| AGAACCAGTTGAACCAACTG+CGG | + | chr6.4:34150343-34150362 | MS.gene000759:intron | 45.0% | |
| CAACACAAGGAGATTCTCAC+AGG | + | chr6.4:34151550-34151569 | MS.gene000759:CDS | 45.0% | |
| GAGAAACTGCAGCAAGAAGA+AGG | + | chr6.4:34151621-34151640 | MS.gene000759:CDS | 45.0% | |
| GAGAATCCAAAGCCAGTGAT+TGG | + | chr6.4:34151449-34151468 | MS.gene000759:CDS | 45.0% | |
| GCAGGAAGCAGTAAGTTCAT+TGG | - | chr6.4:34150426-34150445 | None:intergenic | 45.0% | |
| GGAAATCACACCTTGAGGTA+GGG | - | chr6.4:34150645-34150664 | None:intergenic | 45.0% | |
| TAACCAGGTTAAACCGCAGT+TGG | - | chr6.4:34150359-34150378 | None:intergenic | 45.0% | |
| TCCACCAAGCAAGTTGCAAA+TGG | + | chr6.4:34149962-34149981 | MS.gene000759:CDS | 45.0% | |
| TGGAAATCACACCTTGAGGT+AGG | - | chr6.4:34150646-34150665 | None:intergenic | 45.0% | |
| TTAGTCCCTCTCTCTATCCT+AGG | + | chr6.4:34151042-34151061 | MS.gene000759:intron | 45.0% | |
| TTGCTAGAAGCCACCCATAA+AGG | + | chr6.4:34150605-34150624 | MS.gene000759:intron | 45.0% | |
| ! | ACCATTTGCAACTTGCTTGG+TGG | - | chr6.4:34149966-34149985 | None:intergenic | 45.0% |
| ! | GGTACCACAGATGTCTCTTT+TGG | + | chr6.4:34151019-34151038 | MS.gene000759:CDS | 45.0% |
| ! | TAAACCGCAGTTGGTTCAAC+TGG | - | chr6.4:34150350-34150369 | None:intergenic | 45.0% |
| ! | TTTTAGCAAGCCCTACCTCA+AGG | + | chr6.4:34150632-34150651 | MS.gene000759:intron | 45.0% |
| !! | AAGCCAAGGGTTGATATTGG+CGG | + | chr6.4:34150016-34150035 | MS.gene000759:CDS | 45.0% |
| !! | TGGATTCCAATCACTGGCTT+TGG | - | chr6.4:34151458-34151477 | None:intergenic | 45.0% |
| !!! | ATAATTTAATTTTTTACAAA+GGG | + | chr6.4:34151389-34151408 | MS.gene000759:intron | 5.0% |
| !!! | TATAATTTAATTTTTTACAA+AGG | + | chr6.4:34151388-34151407 | MS.gene000759:intron | 5.0% |
| CTGCAGCAACAGGTAAACCA+AGG | - | chr6.4:34151583-34151602 | None:intergenic | 50.0% | |
| GAACCAACTGCGGTTTAACC+TGG | + | chr6.4:34150353-34150372 | MS.gene000759:intron | 50.0% | |
| TCACCGCCAATATCAACCCT+TGG | - | chr6.4:34150022-34150041 | None:intergenic | 50.0% | |
| !! | AAGGGTTGATATTGGCGGTG+AGG | + | chr6.4:34150021-34150040 | MS.gene000759:CDS | 50.0% |
| !! | CACTAGGACTAGGAGCATCT+GGG | - | chr6.4:34150854-34150873 | None:intergenic | 50.0% |
| !! | TCACTAGGACTAGGAGCATC+TGG | - | chr6.4:34150855-34150874 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 34149869 | 34151646 | 34149869 | ID=MS.gene000759 |
| chr6.4 | mRNA | 34149869 | 34151646 | 34149869 | ID=MS.gene000759.t1;Parent=MS.gene000759 |
| chr6.4 | exon | 34149869 | 34150066 | 34149869 | ID=MS.gene000759.t1.exon1;Parent=MS.gene000759.t1 |
| chr6.4 | CDS | 34149869 | 34150066 | 34149869 | ID=cds.MS.gene000759.t1;Parent=MS.gene000759.t1 |
| chr6.4 | exon | 34150840 | 34150901 | 34150840 | ID=MS.gene000759.t1.exon2;Parent=MS.gene000759.t1 |
| chr6.4 | CDS | 34150840 | 34150901 | 34150840 | ID=cds.MS.gene000759.t1;Parent=MS.gene000759.t1 |
| chr6.4 | exon | 34151000 | 34151040 | 34151000 | ID=MS.gene000759.t1.exon3;Parent=MS.gene000759.t1 |
| chr6.4 | CDS | 34151000 | 34151040 | 34151000 | ID=cds.MS.gene000759.t1;Parent=MS.gene000759.t1 |
| chr6.4 | exon | 34151429 | 34151646 | 34151429 | ID=MS.gene000759.t1.exon4;Parent=MS.gene000759.t1 |
| chr6.4 | CDS | 34151429 | 34151646 | 34151429 | ID=cds.MS.gene000759.t1;Parent=MS.gene000759.t1 |
| Gene Sequence |
| Protein sequence |
