Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51913.t1 | AEO16612.1 | 100 | 176 | 0 | 0 | 1 | 176 | 1 | 176 | 1.10E-99 | 372.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51913.t1 | Q93WI9 | 73.3 | 172 | 46 | 0 | 2 | 173 | 4 | 175 | 8.9e-74 | 277.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51913.t1 | G3FCS8 | 100.0 | 176 | 0 | 0 | 1 | 176 | 1 | 176 | 7.9e-100 | 372.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene51913 | 0.841672 | 4.12E-58 | -1.69E-46 |
| MS.gene049552 | MS.gene51913 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene51913 | 0.803653 | 3.15E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene51913 | 0.810854 | 9.37E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene51913 | 0.804656 | 1.95E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene51913 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene056046 | MS.gene51913 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene51913 | 0.82419 | 9.23E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene51913 | 0.815155 | 1.07E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene51913 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene51913 | 0.816757 | 4.69E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene51913 | 0.807471 | 4.97E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene51913 | -0.813939 | 1.99E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene51913 | 0.852584 | 4.19E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene51913 | 0.800005 | 1.76E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51913 | MS.gene040147 | PPI |
| MS.gene43049 | MS.gene51913 | PPI |
| MS.gene51913 | MS.gene93778 | PPI |
| MS.gene51913 | MS.gene51950 | PPI |
| MS.gene51913 | MS.gene034467 | PPI |
| MS.gene62616 | MS.gene51913 | PPI |
| MS.gene51913 | MS.gene35397 | PPI |
| MS.gene51913 | MS.gene95893 | PPI |
| MS.gene51913 | MS.gene43049 | PPI |
| MS.gene000759 | MS.gene51913 | PPI |
| MS.gene94652 | MS.gene51913 | PPI |
| MS.gene51913 | MS.gene042580 | PPI |
| MS.gene51913 | MS.gene98252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51913.t1 | MTR_7g084970 | 98.295 | 176 | 3 | 0 | 1 | 176 | 1 | 176 | 2.14e-128 | 357 |
| MS.gene51913.t1 | MTR_7g085020 | 77.714 | 175 | 39 | 0 | 2 | 176 | 3 | 177 | 4.50e-102 | 291 |
| MS.gene51913.t1 | MTR_6g033040 | 74.566 | 173 | 44 | 0 | 1 | 173 | 1 | 173 | 3.80e-95 | 273 |
| MS.gene51913.t1 | MTR_7g006630 | 72.024 | 168 | 46 | 1 | 7 | 173 | 2 | 169 | 6.42e-86 | 250 |
| MS.gene51913.t1 | MTR_7g006690 | 68.966 | 174 | 53 | 1 | 1 | 173 | 1 | 174 | 2.48e-85 | 249 |
| MS.gene51913.t1 | MTR_0020s0120 | 59.639 | 166 | 67 | 0 | 8 | 173 | 7 | 172 | 9.52e-74 | 219 |
| MS.gene51913.t1 | MTR_7g085040 | 61.250 | 160 | 61 | 1 | 14 | 173 | 11 | 169 | 2.54e-70 | 210 |
| MS.gene51913.t1 | MTR_7g104460 | 57.471 | 174 | 73 | 1 | 1 | 173 | 1 | 174 | 7.89e-69 | 207 |
| MS.gene51913.t1 | MTR_2g086270 | 56.548 | 168 | 72 | 1 | 7 | 173 | 6 | 173 | 1.07e-67 | 204 |
| MS.gene51913.t1 | MTR_0020s0120 | 56.627 | 166 | 65 | 1 | 8 | 173 | 7 | 165 | 8.54e-67 | 201 |
| MS.gene51913.t1 | MTR_1g060190 | 52.727 | 165 | 76 | 1 | 1 | 163 | 1 | 165 | 1.27e-62 | 191 |
| MS.gene51913.t1 | MTR_8g106840 | 50.575 | 174 | 84 | 2 | 1 | 173 | 1 | 173 | 1.45e-56 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51913.t1 | AT1G65480 | 71.098 | 173 | 50 | 0 | 1 | 173 | 45 | 217 | 1.15e-91 | 266 |
| MS.gene51913.t1 | AT1G65480 | 71.098 | 173 | 50 | 0 | 1 | 173 | 1 | 173 | 1.65e-91 | 264 |
| MS.gene51913.t1 | AT4G20370 | 68.208 | 173 | 55 | 0 | 1 | 173 | 1 | 173 | 2.62e-85 | 248 |
| MS.gene51913.t1 | AT5G03840 | 58.333 | 168 | 67 | 2 | 8 | 173 | 11 | 177 | 7.73e-67 | 202 |
| MS.gene51913.t1 | AT5G62040 | 56.970 | 165 | 69 | 2 | 7 | 169 | 6 | 170 | 1.72e-66 | 201 |
| MS.gene51913.t1 | AT2G27550 | 56.000 | 175 | 75 | 2 | 1 | 173 | 1 | 175 | 3.13e-66 | 200 |
| MS.gene51913.t1 | AT1G18100 | 49.133 | 173 | 85 | 2 | 3 | 173 | 2 | 173 | 2.39e-54 | 170 |
Find 58 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTACATTGTTGATGAAAT+AGG | 0.231768 | 7.2:+22710471 | None:intergenic |
| CTGGCTGTAGGGCGTGTAAT+AGG | 0.236534 | 7.2:-22712016 | MS.gene51913:CDS |
| GAGCTCAAACCTTCTCAAAT+TGG | 0.266960 | 7.2:-22711917 | MS.gene51913:CDS |
| TCCTTAAAAGTGGGGTTACT+TGG | 0.279792 | 7.2:+22711689 | None:intergenic |
| TGGCTGTAGGGCGTGTAATA+GGG | 0.298942 | 7.2:-22712015 | MS.gene51913:CDS |
| GAAAGGCCACGACCCACTTC+GGG | 0.356462 | 7.2:-22710515 | MS.gene51913:CDS |
| TTACTTGGGCTAGGTGAATC+AGG | 0.383636 | 7.2:+22711704 | None:intergenic |
| TTTGCTGAACTCTACAATCT+TGG | 0.383955 | 7.2:-22710401 | MS.gene51913:CDS |
| AAAGTGACTTCAGTGGTTCC+TGG | 0.411425 | 7.2:+22711541 | None:intergenic |
| TGTCAAAGGGAGAGTGGCTC+TGG | 0.412838 | 7.2:-22710350 | MS.gene51913:CDS |
| AGGTTGGTGACTGATATTCC+AGG | 0.439180 | 7.2:-22711559 | MS.gene51913:CDS |
| GGTAATAAAGATGTGAATAA+TGG | 0.441855 | 7.2:-22711944 | MS.gene51913:CDS |
| GTTTCCACCAACACTCACTC+TGG | 0.463855 | 7.2:+22711886 | None:intergenic |
| TGAAAGGCCACGACCCACTT+CGG | 0.476912 | 7.2:-22710516 | MS.gene51913:CDS |
| TCATCAACAATGTAGACAAA+GGG | 0.476961 | 7.2:-22710465 | MS.gene51913:CDS |
| TTAATATAATAATTATCTAA+AGG | 0.478344 | 7.2:+22710319 | None:intergenic |
| TTGAAGAAGACAGCAGCAAC+AGG | 0.481772 | 7.2:+22710374 | None:intergenic |
| CTGTCTTCTTCAATTGTCAA+AGG | 0.484561 | 7.2:-22710364 | MS.gene51913:CDS |
| GGAACCACTGAAGTCACTTT+CGG | 0.499071 | 7.2:-22711538 | MS.gene51913:intron |
| CAACCCAGAGTGAGTGTTGG+TGG | 0.502018 | 7.2:-22711890 | MS.gene51913:CDS |
| CCTTAAAAGTGGGGTTACTT+GGG | 0.502208 | 7.2:+22711690 | None:intergenic |
| AGACAAAGGGTTTATGCTCC+AGG | 0.503769 | 7.2:-22710452 | MS.gene51913:CDS |
| ATTCCTCTCCGAGTGACCTA+TGG | 0.511136 | 7.2:-22711965 | MS.gene51913:CDS |
| TGGATCCCCGAAGTGGGTCG+TGG | 0.516083 | 7.2:+22710509 | None:intergenic |
| TGTCTTCTTCAATTGTCAAA+GGG | 0.520471 | 7.2:-22710363 | MS.gene51913:CDS |
| GTGGAGGTACTCCTTAAAAG+TGG | 0.534289 | 7.2:+22711679 | None:intergenic |
| GTAGGAATCCACTGGCTGTA+GGG | 0.534446 | 7.2:-22712027 | MS.gene51913:CDS |
| CTTTATTACCATAGGTCACT+CGG | 0.538470 | 7.2:+22711957 | None:intergenic |
| ATTCACATCTTTATTACCAT+AGG | 0.539018 | 7.2:+22711949 | None:intergenic |
| TTCATCAACAATGTAGACAA+AGG | 0.541638 | 7.2:-22710466 | MS.gene51913:CDS |
| GAGAGGAATGGAACTTTCAA+AGG | 0.547771 | 7.2:+22711979 | None:intergenic |
| GGCTGTAGGGCGTGTAATAG+GGG | 0.552217 | 7.2:-22712014 | MS.gene51913:CDS |
| TTCAATTGTCAAAGGGAGAG+TGG | 0.552986 | 7.2:-22710356 | MS.gene51913:CDS |
| AAAGTGGGGTTACTTGGGCT+AGG | 0.558426 | 7.2:+22711695 | None:intergenic |
| TTTCCACCAACACTCACTCT+GGG | 0.558856 | 7.2:+22711887 | None:intergenic |
| TGATTTGCACATAGGTAATG+AGG | 0.563045 | 7.2:-22710549 | MS.gene51913:intron |
| CGGTAGCAGTAGGAATCCAC+TGG | 0.566544 | 7.2:-22712035 | MS.gene51913:CDS |
| GGTTGATTGCCAATTTGAGA+AGG | 0.568164 | 7.2:+22711908 | None:intergenic |
| TGGAGGTACTCCTTAAAAGT+GGG | 0.569324 | 7.2:+22711680 | None:intergenic |
| ATGAGGTTGTAAATTATGAA+AGG | 0.570056 | 7.2:-22710532 | MS.gene51913:CDS |
| CACATATGGCCGGTAGCAGT+AGG | 0.586122 | 7.2:-22712045 | None:intergenic |
| TGTAAATTACTAGGGTGTAG+AGG | 0.586142 | 7.2:+22711852 | None:intergenic |
| ATAGGTCACTCGGAGAGGAA+TGG | 0.588640 | 7.2:+22711967 | None:intergenic |
| AACTGAGAACCACATATGGC+CGG | 0.594659 | 7.2:-22712055 | None:intergenic |
| CAAAGGGAGAGTGGCTCTGG+CGG | 0.601132 | 7.2:-22710347 | MS.gene51913:CDS |
| AGTAGGAATCCACTGGCTGT+AGG | 0.611301 | 7.2:-22712028 | MS.gene51913:CDS |
| AAACGATGGATCCCCGAAGT+GGG | 0.619464 | 7.2:+22710503 | None:intergenic |
| CAGTGGATTCCTACTGCTAC+CGG | 0.625296 | 7.2:+22712036 | None:intergenic |
| AAAGGCCACGACCCACTTCG+GGG | 0.626977 | 7.2:-22710514 | MS.gene51913:CDS |
| GAAACGATGGATCCCCGAAG+TGG | 0.627096 | 7.2:+22710502 | None:intergenic |
| ATTACACGCCCTACAGCCAG+TGG | 0.629675 | 7.2:+22712019 | None:intergenic |
| TTACCATAGGTCACTCGGAG+AGG | 0.633443 | 7.2:+22711962 | None:intergenic |
| ATAGGACAAACACGAAACGA+TGG | 0.633568 | 7.2:+22710489 | None:intergenic |
| ATTGATTTACTCACCAGTGG+AGG | 0.648865 | 7.2:+22711663 | None:intergenic |
| AAAGGGTTTATGCTCCAGGA+TGG | 0.651446 | 7.2:-22710448 | MS.gene51913:CDS |
| GGAGGTACTCCTTAAAAGTG+GGG | 0.684138 | 7.2:+22711681 | None:intergenic |
| CATACCGAAAGTGACTTCAG+TGG | 0.687337 | 7.2:+22711534 | None:intergenic |
| AATCAACCCAGAGTGAGTGT+TGG | 0.706365 | 7.2:-22711893 | MS.gene51913:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAAAAATTACATG+AGG | + | chr7.2:22711348-22711367 | None:intergenic | 10.0% |
| !!! | TGAAGAAATTTTAATTTTTT+TGG | - | chr7.2:22711445-22711464 | MS.gene51913:intron | 10.0% |
| !! | ACTATATAATGTAAATTACT+AGG | + | chr7.2:22710531-22710550 | None:intergenic | 15.0% |
| !! | CTATATAATGTAAATTACTA+GGG | + | chr7.2:22710530-22710549 | None:intergenic | 15.0% |
| !! | TAACTTCAAAATATGAAAAA+AGG | - | chr7.2:22711168-22711187 | MS.gene51913:intron | 15.0% |
| !! | TATTATTTAACAAAAGTCTT+AGG | + | chr7.2:22710761-22710780 | None:intergenic | 15.0% |
| !!! | GTTTTTTATAAATTGCAAAT+TGG | + | chr7.2:22711225-22711244 | None:intergenic | 15.0% |
| !!! | TTTTTACAAATAAAGTTAGA+GGG | - | chr7.2:22710943-22710962 | MS.gene51913:intron | 15.0% |
| !! | AATAAATGAATATGCTACAA+TGG | + | chr7.2:22711655-22711674 | None:intergenic | 20.0% |
| !! | AATCAAACTCAAAATTAACT+AGG | + | chr7.2:22711803-22711822 | None:intergenic | 20.0% |
| !! | AGAAACTACATTATGATAAT+AGG | + | chr7.2:22710612-22710631 | None:intergenic | 20.0% |
| !! | ATAATATAACAAGAACTCAA+TGG | - | chr7.2:22710897-22710916 | MS.gene51913:intron | 20.0% |
| !! | ATCAAACTCAAAATTAACTA+GGG | + | chr7.2:22711802-22711821 | None:intergenic | 20.0% |
| !! | GCAATTTATAAAAAACTCAT+AGG | - | chr7.2:22711229-22711248 | MS.gene51913:intron | 20.0% |
| !! | TAATATAACAAGAACTCAAT+GGG | - | chr7.2:22710898-22710917 | MS.gene51913:intron | 20.0% |
| !!! | AAATAATCCAAGTTTAAGAT+TGG | + | chr7.2:22711120-22711139 | None:intergenic | 20.0% |
| !!! | AATTTTCAAAAACTGCAAAT+TGG | + | chr7.2:22711257-22711276 | None:intergenic | 20.0% |
| !!! | ATTTCTTGCTCTATTTTTAT+AGG | - | chr7.2:22710633-22710652 | MS.gene51913:intron | 20.0% |
| !!! | CTTTTTACAAATAAAGTTAG+AGG | - | chr7.2:22710942-22710961 | MS.gene51913:intron | 20.0% |
| !!! | GCAGTTTTTGAAAATTTAAA+GGG | - | chr7.2:22711261-22711280 | MS.gene51913:intron | 20.0% |
| !!! | TGCAGTTTTTGAAAATTTAA+AGG | - | chr7.2:22711260-22711279 | MS.gene51913:intron | 20.0% |
| !!! | TTTTTCATTTCTTAGATGTT+TGG | + | chr7.2:22711627-22711646 | None:intergenic | 20.0% |
| ! | AAATGAACAATTCTACCAAT+AGG | + | chr7.2:22711761-22711780 | None:intergenic | 25.0% |
| ! | ATGAAATTTCAGAAAAGTTG+AGG | - | chr7.2:22711142-22711161 | MS.gene51913:intron | 25.0% |
| ! | ATGAGGTTGTAAATTATGAA+AGG | - | chr7.2:22711839-22711858 | MS.gene51913:intron | 25.0% |
| ! | ATTCACATCTTTATTACCAT+AGG | + | chr7.2:22710425-22710444 | None:intergenic | 25.0% |
| ! | CACTTTCAAATTATGCAAAT+TGG | + | chr7.2:22711378-22711397 | None:intergenic | 25.0% |
| ! | GGTAATAAAGATGTGAATAA+TGG | - | chr7.2:22710427-22710446 | MS.gene51913:CDS | 25.0% |
| ! | TATTAAAGAGAAAGACTACA+TGG | - | chr7.2:22711730-22711749 | MS.gene51913:intron | 25.0% |
| ! | TGAAATTTCAGAAAAGTTGA+GGG | - | chr7.2:22711143-22711162 | MS.gene51913:intron | 25.0% |
| !! | CATTTCTAATTTTTCTTGCT+TGG | - | chr7.2:22711076-22711095 | MS.gene51913:intron | 25.0% |
| !! | GGTTTTTACCAAAATCATAT+TGG | + | chr7.2:22711543-22711562 | None:intergenic | 25.0% |
| !!! | TCTATTTTTATAGGTTATGG+TGG | - | chr7.2:22710642-22710661 | MS.gene51913:intron | 25.0% |
| !!! | TGCTCTATTTTTATAGGTTA+TGG | - | chr7.2:22710639-22710658 | MS.gene51913:intron | 25.0% |
| !!! | TTTTTGAAGTTCTAATGCAT+TGG | + | chr7.2:22711564-22711583 | None:intergenic | 25.0% |
| AAACTCAAAATTAACTAGGG+TGG | + | chr7.2:22711799-22711818 | None:intergenic | 30.0% | |
| CTCTGAATTTGACAAAACTA+TGG | + | chr7.2:22711599-22711618 | None:intergenic | 30.0% | |
| CTCTTCTCTCAATAAACTTT+AGG | - | chr7.2:22710792-22710811 | MS.gene51913:intron | 30.0% | |
| TCATCAACAATGTAGACAAA+GGG | - | chr7.2:22711906-22711925 | MS.gene51913:CDS | 30.0% | |
| TCTCTCAATAAACTTTAGGT+TGG | - | chr7.2:22710796-22710815 | MS.gene51913:intron | 30.0% | |
| TGATTCTCCAATCTTAAACT+TGG | - | chr7.2:22711110-22711129 | MS.gene51913:intron | 30.0% | |
| TGTCTTCTTCAATTGTCAAA+GGG | - | chr7.2:22712008-22712027 | MS.gene51913:CDS | 30.0% | |
| TTCATCAACAATGTAGACAA+AGG | - | chr7.2:22711905-22711924 | MS.gene51913:CDS | 30.0% | |
| ! | ACATGAATCTGTTACTTGTT+AGG | - | chr7.2:22710870-22710889 | MS.gene51913:intron | 30.0% |
| ! | GTCTACATTGTTGATGAAAT+AGG | + | chr7.2:22711903-22711922 | None:intergenic | 30.0% |
| !! | AGTTTGATTGATTTGCACAT+AGG | - | chr7.2:22711814-22711833 | MS.gene51913:intron | 30.0% |
| ACCAAAATCATATTGGCATG+TGG | + | chr7.2:22711536-22711555 | None:intergenic | 35.0% | |
| ATCACATTACTGAGTGTGTT+TGG | - | chr7.2:22710985-22711004 | MS.gene51913:intron | 35.0% | |
| CTGTCTTCTTCAATTGTCAA+AGG | - | chr7.2:22712007-22712026 | MS.gene51913:CDS | 35.0% | |
| CTTTATTACCATAGGTCACT+CGG | + | chr7.2:22710417-22710436 | None:intergenic | 35.0% | |
| GGTAAATCATAAGCAGCATA+AGG | + | chr7.2:22710740-22710759 | None:intergenic | 35.0% | |
| TGTAAATTACTAGGGTGTAG+AGG | + | chr7.2:22710522-22710541 | None:intergenic | 35.0% | |
| TTTGCTGAACTCTACAATCT+TGG | - | chr7.2:22711970-22711989 | MS.gene51913:CDS | 35.0% | |
| ! | ACCACATGCCAATATGATTT+TGG | - | chr7.2:22711532-22711551 | MS.gene51913:intron | 35.0% |
| ! | GTAATTGATTTACTCACCAG+TGG | + | chr7.2:22710714-22710733 | None:intergenic | 35.0% |
| ! | TGATTTGCACATAGGTAATG+AGG | - | chr7.2:22711822-22711841 | MS.gene51913:intron | 35.0% |
| ATAGGACAAACACGAAACGA+TGG | + | chr7.2:22711885-22711904 | None:intergenic | 40.0% | |
| CCTTAAAAGTGGGGTTACTT+GGG | + | chr7.2:22710684-22710703 | None:intergenic | 40.0% | |
| GACTACATGGTTATGCCTAT+TGG | - | chr7.2:22711743-22711762 | MS.gene51913:intron | 40.0% | |
| GAGAGGAATGGAACTTTCAA+AGG | + | chr7.2:22710395-22710414 | None:intergenic | 40.0% | |
| GAGCTCAAACCTTCTCAAAT+TGG | - | chr7.2:22710454-22710473 | MS.gene51913:CDS | 40.0% | |
| GGTTGATTGCCAATTTGAGA+AGG | + | chr7.2:22710466-22710485 | None:intergenic | 40.0% | |
| TCCTTAAAAGTGGGGTTACT+TGG | + | chr7.2:22710685-22710704 | None:intergenic | 40.0% | |
| TTCAATTGTCAAAGGGAGAG+TGG | - | chr7.2:22712015-22712034 | MS.gene51913:CDS | 40.0% | |
| ! | ATTGATTTACTCACCAGTGG+AGG | + | chr7.2:22710711-22710730 | None:intergenic | 40.0% |
| ! | TTGAAATTTTGTCGCCATCC+TGG | + | chr7.2:22711940-22711959 | None:intergenic | 40.0% |
| !! | TGGAGGTACTCCTTAAAAGT+GGG | + | chr7.2:22710694-22710713 | None:intergenic | 40.0% |
| AAAGGGTTTATGCTCCAGGA+TGG | - | chr7.2:22711923-22711942 | MS.gene51913:CDS | 45.0% | |
| AAAGTGACTTCAGTGGTTCC+TGG | + | chr7.2:22710833-22710852 | None:intergenic | 45.0% | |
| AATCAACCCAGAGTGAGTGT+TGG | - | chr7.2:22710478-22710497 | MS.gene51913:CDS | 45.0% | |
| AGACAAAGGGTTTATGCTCC+AGG | - | chr7.2:22711919-22711938 | MS.gene51913:CDS | 45.0% | |
| CATACCGAAAGTGACTTCAG+TGG | + | chr7.2:22710840-22710859 | None:intergenic | 45.0% | |
| TTGAAGAAGACAGCAGCAAC+AGG | + | chr7.2:22712000-22712019 | None:intergenic | 45.0% | |
| TTTCCACCAACACTCACTCT+GGG | + | chr7.2:22710487-22710506 | None:intergenic | 45.0% | |
| ! | CACTGAAGTCACTTTCGGTA+TGG | - | chr7.2:22710838-22710857 | MS.gene51913:intron | 45.0% |
| ! | GGAACCACTGAAGTCACTTT+CGG | - | chr7.2:22710833-22710852 | MS.gene51913:intron | 45.0% |
| ! | TTACTTGGGCTAGGTGAATC+AGG | + | chr7.2:22710670-22710689 | None:intergenic | 45.0% |
| !! | AGGTTGGTGACTGATATTCC+AGG | - | chr7.2:22710812-22710831 | MS.gene51913:intron | 45.0% |
| !! | CCCAAGTAACCCCACTTTTA+AGG | - | chr7.2:22710681-22710700 | MS.gene51913:intron | 45.0% |
| !! | GGAGGTACTCCTTAAAAGTG+GGG | + | chr7.2:22710693-22710712 | None:intergenic | 45.0% |
| !! | GTGGAGGTACTCCTTAAAAG+TGG | + | chr7.2:22710695-22710714 | None:intergenic | 45.0% |
| !!! | CTTTTAAGGAGTACCTCCAC+TGG | - | chr7.2:22710695-22710714 | MS.gene51913:intron | 45.0% |
| !!! | ATTATTAAAATTTTGAAATT+TGG | + | chr7.2:22711317-22711336 | None:intergenic | 5.0% |
| !!! | CAAAATTTTAATAATATATA+GGG | - | chr7.2:22711322-22711341 | MS.gene51913:intron | 5.0% |
| !!! | TACAATTTTTAAAAATTATA+GGG | - | chr7.2:22711198-22711217 | MS.gene51913:intron | 5.0% |
| !!! | TATTTTTAAAAAATACAAAT+TGG | + | chr7.2:22711288-22711307 | None:intergenic | 5.0% |
| !!! | TCAAAATTTTAATAATATAT+AGG | - | chr7.2:22711321-22711340 | MS.gene51913:intron | 5.0% |
| !!! | TGTAATTTTTTTTAAAATAT+AGG | - | chr7.2:22711350-22711369 | MS.gene51913:intron | 5.0% |
| !!! | TTACAATTTTTAAAAATTAT+AGG | - | chr7.2:22711197-22711216 | MS.gene51913:intron | 5.0% |
| !!! | TTGTATTTTTTAAAAATATA+GGG | - | chr7.2:22711290-22711309 | MS.gene51913:intron | 5.0% |
| !!! | TTTGTATTTTTTAAAAATAT+AGG | - | chr7.2:22711289-22711308 | MS.gene51913:intron | 5.0% |
| AAACGATGGATCCCCGAAGT+GGG | + | chr7.2:22711871-22711890 | None:intergenic | 50.0% | |
| AAAGTGGGGTTACTTGGGCT+AGG | + | chr7.2:22710679-22710698 | None:intergenic | 50.0% | |
| ATAGGTCACTCGGAGAGGAA+TGG | + | chr7.2:22710407-22710426 | None:intergenic | 50.0% | |
| ATTCCTCTCCGAGTGACCTA+TGG | - | chr7.2:22710406-22710425 | MS.gene51913:CDS | 50.0% | |
| GTTTCCACCAACACTCACTC+TGG | + | chr7.2:22710488-22710507 | None:intergenic | 50.0% | |
| TGGCTGTAGGGCGTGTAATA+GGG | - | chr7.2:22710356-22710375 | MS.gene51913:CDS | 50.0% | |
| TTACCATAGGTCACTCGGAG+AGG | + | chr7.2:22710412-22710431 | None:intergenic | 50.0% | |
| ! | AGTAGGAATCCACTGGCTGT+AGG | - | chr7.2:22710343-22710362 | MS.gene51913:CDS | 50.0% |
| ! | CAGTGGATTCCTACTGCTAC+CGG | + | chr7.2:22710338-22710357 | None:intergenic | 50.0% |
| ! | GTAGGAATCCACTGGCTGTA+GGG | - | chr7.2:22710344-22710363 | MS.gene51913:CDS | 50.0% |
| ATTACACGCCCTACAGCCAG+TGG | + | chr7.2:22710355-22710374 | None:intergenic | 55.0% | |
| CGGTAGCAGTAGGAATCCAC+TGG | - | chr7.2:22710336-22710355 | MS.gene51913:CDS | 55.0% | |
| CTGGCTGTAGGGCGTGTAAT+AGG | - | chr7.2:22710355-22710374 | MS.gene51913:CDS | 55.0% | |
| GAAACGATGGATCCCCGAAG+TGG | + | chr7.2:22711872-22711891 | None:intergenic | 55.0% | |
| GGCTGTAGGGCGTGTAATAG+GGG | - | chr7.2:22710357-22710376 | MS.gene51913:CDS | 55.0% | |
| TGAAAGGCCACGACCCACTT+CGG | - | chr7.2:22711855-22711874 | MS.gene51913:intron | 55.0% | |
| TGTCAAAGGGAGAGTGGCTC+TGG | - | chr7.2:22712021-22712040 | MS.gene51913:CDS | 55.0% | |
| !! | CAACCCAGAGTGAGTGTTGG+TGG | - | chr7.2:22710481-22710500 | MS.gene51913:CDS | 55.0% |
| AAAGGCCACGACCCACTTCG+GGG | - | chr7.2:22711857-22711876 | MS.gene51913:intron | 60.0% | |
| GAAAGGCCACGACCCACTTC+GGG | - | chr7.2:22711856-22711875 | MS.gene51913:intron | 60.0% | |
| !! | CAAAGGGAGAGTGGCTCTGG+CGG | - | chr7.2:22712024-22712043 | MS.gene51913:CDS | 60.0% |
| TGGATCCCCGAAGTGGGTCG+TGG | + | chr7.2:22711865-22711884 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22710331 | 22712062 | 22710331 | ID=MS.gene51913 |
| chr7.2 | mRNA | 22710331 | 22712062 | 22710331 | ID=MS.gene51913.t1;Parent=MS.gene51913 |
| chr7.2 | exon | 22711862 | 22712062 | 22711862 | ID=MS.gene51913.t1.exon1;Parent=MS.gene51913.t1 |
| chr7.2 | CDS | 22711862 | 22712062 | 22711862 | ID=cds.MS.gene51913.t1;Parent=MS.gene51913.t1 |
| chr7.2 | exon | 22711677 | 22711738 | 22711677 | ID=MS.gene51913.t1.exon2;Parent=MS.gene51913.t1 |
| chr7.2 | CDS | 22711677 | 22711738 | 22711677 | ID=cds.MS.gene51913.t1;Parent=MS.gene51913.t1 |
| chr7.2 | exon | 22711539 | 22711579 | 22711539 | ID=MS.gene51913.t1.exon3;Parent=MS.gene51913.t1 |
| chr7.2 | CDS | 22711539 | 22711579 | 22711539 | ID=cds.MS.gene51913.t1;Parent=MS.gene51913.t1 |
| chr7.2 | exon | 22710331 | 22710557 | 22710331 | ID=MS.gene51913.t1.exon4;Parent=MS.gene51913.t1 |
| chr7.2 | CDS | 22710331 | 22710557 | 22710331 | ID=cds.MS.gene51913.t1;Parent=MS.gene51913.t1 |
| Gene Sequence |
| Protein sequence |
