Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003685.t1 | RHN61332.1 | 98.7 | 152 | 2 | 0 | 1 | 152 | 3 | 154 | 9.00E-66 | 259.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003685.t1 | Q9SMW7 | 76.5 | 149 | 33 | 2 | 1 | 148 | 9 | 156 | 1.7e-52 | 206.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003685.t1 | B7FMW7 | 98.7 | 152 | 2 | 0 | 1 | 152 | 9 | 160 | 6.5e-66 | 259.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene003685 | MS.gene013940 | PPI |
| MS.gene003685 | MS.gene23317 | PPI |
| MS.gene003685 | MS.gene73089 | PPI |
| MS.gene003685 | MS.gene068093 | PPI |
| MS.gene003685 | MS.gene41901 | PPI |
| MS.gene003685 | MS.gene50742 | PPI |
| MS.gene003685 | MS.gene41902 | PPI |
| MS.gene003685 | MS.gene039827 | PPI |
| MS.gene003685 | MS.gene003688 | PPI |
| MS.gene003685 | MS.gene42247 | PPI |
| MS.gene003685 | MS.gene044693 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003685.t1 | MTR_4g071000 | 98.684 | 152 | 2 | 0 | 1 | 152 | 9 | 160 | 5.08e-108 | 304 |
| MS.gene003685.t1 | MTR_3g020660 | 89.333 | 150 | 16 | 0 | 1 | 150 | 9 | 158 | 2.68e-96 | 275 |
| MS.gene003685.t1 | MTR_3g020520 | 82.787 | 122 | 21 | 0 | 29 | 150 | 404 | 525 | 4.02e-66 | 209 |
| MS.gene003685.t1 | MTR_3g020640 | 72.593 | 135 | 30 | 1 | 16 | 150 | 1003 | 1130 | 5.19e-59 | 197 |
| MS.gene003685.t1 | MTR_3g020650 | 76.471 | 85 | 20 | 0 | 30 | 114 | 1028 | 1112 | 1.78e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003685.t1 | AT1G17880 | 86.014 | 143 | 18 | 2 | 1 | 142 | 9 | 150 | 3.27e-85 | 247 |
| MS.gene003685.t1 | AT1G73230 | 85.235 | 149 | 21 | 1 | 1 | 148 | 9 | 157 | 2.15e-80 | 235 |
Find 51 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTCAGGAGCCTGCTTC+TGG | 0.192683 | 4.1:-32001069 | None:intergenic |
| TGAGGAGGTCAATATCTTTA+AGG | 0.219626 | 4.1:+32000363 | MS.gene003685:CDS |
| TAATTTCTTACTCTTTGTTT+GGG | 0.224790 | 4.1:-32000580 | None:intergenic |
| GTAATTTCTTACTCTTTGTT+TGG | 0.245420 | 4.1:-32000581 | None:intergenic |
| CATTCACACCTATTCTCTTC+AGG | 0.292092 | 4.1:-32000327 | None:intergenic |
| ATTGTTCAGCTATCTTCTTC+AGG | 0.297553 | 4.1:-32001045 | None:intergenic |
| TTTCACTTCTACAGAGTTGC+AGG | 0.308571 | 4.1:+32000887 | MS.gene003685:intron |
| GTTCAAAGCACATACCTAAT+TGG | 0.327309 | 4.1:-32000932 | None:intergenic |
| GCTGAACCAGCACCTGCTTC+AGG | 0.334925 | 4.1:-32001082 | None:intergenic |
| GTCTCTCCTGGGACAAGCTC+TGG | 0.335105 | 4.1:-32001136 | None:intergenic |
| CCTAGCATTATCCACCAATT+AGG | 0.352096 | 4.1:+32000918 | MS.gene003685:CDS |
| TACCTTTGGGGTTTAAGAAC+TGG | 0.359158 | 4.1:-32000399 | None:intergenic |
| CGTCCATTGCTGCTAATACA+TGG | 0.419485 | 4.1:+32000541 | MS.gene003685:CDS |
| GCAGTCTCAAAAGTCTCTCC+TGG | 0.431286 | 4.1:-32001148 | None:intergenic |
| ATTCACACCTATTCTCTTCA+GGG | 0.451011 | 4.1:-32000326 | None:intergenic |
| TATTGACCTCCTCAATTTGT+GGG | 0.452604 | 4.1:-32000354 | None:intergenic |
| ATGGGCTGATATTACCTTTG+GGG | 0.456873 | 4.1:-32000411 | None:intergenic |
| CAGAAGCAGGCTCCTGAAGC+AGG | 0.458056 | 4.1:+32001070 | MS.gene003685:CDS |
| TCCTCCGGTTCGAACAGAAC+CGG | 0.461978 | 4.1:-31999816 | None:intergenic |
| CAGAGCACCCTGAAGAGAAT+AGG | 0.468639 | 4.1:+32000319 | MS.gene003685:CDS |
| ATAACAAATCTAACTATCCT+TGG | 0.472981 | 4.1:-32001182 | None:intergenic |
| TGTTTACCTCAGAAAGAAGA+AGG | 0.477565 | 4.1:+32000258 | MS.gene003685:intron |
| TCTGTTCGAACCGGAGGAAA+GGG | 0.482236 | 4.1:+31999821 | MS.gene003685:CDS |
| CAGGCTCCTGAAGCAGGTGC+TGG | 0.494992 | 4.1:+32001076 | MS.gene003685:CDS |
| AGCTGAACAATTCCAGAAGC+AGG | 0.497000 | 4.1:+32001057 | MS.gene003685:CDS |
| CCTAATTGGTGGATAATGCT+AGG | 0.497579 | 4.1:-32000918 | None:intergenic |
| GACTGCTGCTGAGGAGGCCA+AGG | 0.501675 | 4.1:+32001165 | MS.gene003685:CDS |
| ATATTGACCTCCTCAATTTG+TGG | 0.501827 | 4.1:-32000355 | None:intergenic |
| CAACAACTACAGATGACAAA+AGG | 0.502653 | 4.1:+32000293 | MS.gene003685:CDS |
| GATGTCCCAGAGCTTGTCCC+AGG | 0.514432 | 4.1:+32001130 | MS.gene003685:CDS |
| GACCTCCTCAATTTGTGGGA+TGG | 0.524360 | 4.1:-32000350 | None:intergenic |
| CATCTGTAGTTGTTGTCTTG+TGG | 0.525038 | 4.1:-32000285 | None:intergenic |
| TTCTGTTCGAACCGGAGGAA+AGG | 0.525397 | 4.1:+31999820 | MS.gene003685:CDS |
| GCTAATACATGGGTTGTTAG+TGG | 0.526432 | 4.1:+32000552 | MS.gene003685:CDS |
| TCTCTCCTGGGACAAGCTCT+GGG | 0.528395 | 4.1:-32001135 | None:intergenic |
| GAATGCCATCCCACAAATTG+AGG | 0.534495 | 4.1:+32000345 | MS.gene003685:CDS |
| AACCCATGTATTAGCAGCAA+TGG | 0.539996 | 4.1:-32000544 | None:intergenic |
| TCTGACGGTACCCTTTCCTC+CGG | 0.545452 | 4.1:-31999831 | None:intergenic |
| AATTTCTTACTCTTTGTTTG+GGG | 0.553423 | 4.1:-32000579 | None:intergenic |
| TGTAGTTGTTGTCTTGTGGA+CGG | 0.561453 | 4.1:-32000281 | None:intergenic |
| CTAATTGGTGGATAATGCTA+GGG | 0.563275 | 4.1:-32000917 | None:intergenic |
| ATGGCCGGTTCTGTTCGAAC+CGG | 0.568678 | 4.1:+31999812 | MS.gene003685:CDS |
| GCCGGTTCTGTTCGAACCGG+AGG | 0.569814 | 4.1:+31999815 | MS.gene003685:CDS |
| CAGTCTCAAAAGTCTCTCCT+GGG | 0.576944 | 4.1:-32001147 | None:intergenic |
| GTCCATTGCTGCTAATACAT+GGG | 0.579320 | 4.1:+32000542 | MS.gene003685:CDS |
| ATCCAGTTCTTAAACCCCAA+AGG | 0.585033 | 4.1:+32000397 | MS.gene003685:CDS |
| GAAAAGTTGATGAAGATGGC+CGG | 0.594138 | 4.1:+31999797 | None:intergenic |
| CAAAGCACATACCTAATTGG+TGG | 0.599520 | 4.1:-32000929 | None:intergenic |
| GAGGAAAGGGTACCGTCAGA+AGG | 0.619370 | 4.1:+31999834 | MS.gene003685:CDS |
| CATATAAATATACCTTCTGA+CGG | 0.639530 | 4.1:-31999846 | None:intergenic |
| TGCCATCCCACAAATTGAGG+AGG | 0.645011 | 4.1:+32000348 | MS.gene003685:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATTATTAAAAAAC+AGG | + | chr4.1:32001004-32001023 | MS.gene003685:intron | 10.0% |
| !!! | ATTTATTCTTTTTATATGAT+AGG | + | chr4.1:32000446-32000465 | MS.gene003685:intron | 10.0% |
| !! | AAAAACAAGTTATATTAGAA+TGG | - | chr4.1:31999888-31999907 | None:intergenic | 15.0% |
| !!! | AATATTTTAGATATATCTGT+CGG | + | chr4.1:31999953-31999972 | MS.gene003685:intron | 15.0% |
| !!! | GAAATTAATATGTCAATTTT+AGG | - | chr4.1:32000871-32000890 | None:intergenic | 15.0% |
| !! | AAGAAACATTCTTTAAACAA+TGG | - | chr4.1:32000154-32000173 | None:intergenic | 20.0% |
| !! | AATAAATGCTGGAAATATTA+TGG | - | chr4.1:32000433-32000452 | None:intergenic | 20.0% |
| !! | AATACTTTAAATGAAAACTC+TGG | + | chr4.1:32000679-32000698 | MS.gene003685:intron | 20.0% |
| !! | ATAAATGCTGGAAATATTAT+GGG | - | chr4.1:32000432-32000451 | None:intergenic | 20.0% |
| !! | CAATAGATATATGAAGAAAA+AGG | - | chr4.1:32000609-32000628 | None:intergenic | 20.0% |
| !! | CATATAAAAAGAATAAATGC+TGG | - | chr4.1:32000444-32000463 | None:intergenic | 20.0% |
| !! | TTTATATGTGAAACTCATTA+TGG | + | chr4.1:31999861-31999880 | MS.gene003685:intron | 20.0% |
| !!! | TAATTTCTTACTCTTTGTTT+GGG | - | chr4.1:32000583-32000602 | None:intergenic | 20.0% |
| ! | AAACAAAAGGCAGAAAATTA+CGG | - | chr4.1:32000243-32000262 | None:intergenic | 25.0% |
| ! | AATATTCAAAACGTTCAACT+TGG | - | chr4.1:32000994-32001013 | None:intergenic | 25.0% |
| ! | AGAAAACAATCAAAGCTTAA+TGG | - | chr4.1:32000509-32000528 | None:intergenic | 25.0% |
| ! | ATATTCAAAACGTTCAACTT+GGG | - | chr4.1:32000993-32001012 | None:intergenic | 25.0% |
| ! | CAATGCTATACAACTAATAT+TGG | - | chr4.1:31999921-31999940 | None:intergenic | 25.0% |
| ! | CATATAAATATACCTTCTGA+CGG | - | chr4.1:31999849-31999868 | None:intergenic | 25.0% |
| ! | GTAATTTCTTACTCTTTGTT+TGG | - | chr4.1:32000584-32000603 | None:intergenic | 25.0% |
| !! | AATTTCTTACTCTTTGTTTG+GGG | - | chr4.1:32000582-32000601 | None:intergenic | 25.0% |
| !! | ATTTTCCCACAATTTATGAA+CGG | + | chr4.1:32000791-32000810 | MS.gene003685:intron | 25.0% |
| !!! | AACTTTTTCAAAGGTTTGTT+TGG | + | chr4.1:32000952-32000971 | MS.gene003685:intron | 25.0% |
| !!! | TTATATTTTAGAGTACACCA+GGG | + | chr4.1:32000765-32000784 | MS.gene003685:intron | 25.0% |
| AAAAACAGGACCAGATAATT+TGG | + | chr4.1:32001018-32001037 | MS.gene003685:intron | 30.0% | |
| AAAATGAACAGATTCAGCAT+AGG | - | chr4.1:32000727-32000746 | None:intergenic | 30.0% | |
| AACAAAAGGCAGAAAATTAC+GGG | - | chr4.1:32000242-32000261 | None:intergenic | 30.0% | |
| ! | ATATCTGTCGGTTGTTATTA+GGG | + | chr4.1:31999965-31999984 | MS.gene003685:intron | 30.0% |
| ! | ATCATTTTCTTCTTGTACAG+TGG | - | chr4.1:32001107-32001126 | None:intergenic | 30.0% |
| ! | TATATCTGTCGGTTGTTATT+AGG | + | chr4.1:31999964-31999983 | MS.gene003685:intron | 30.0% |
| ! | TCTGTTCATTTTGCAATATC+TGG | + | chr4.1:32000735-32000754 | MS.gene003685:intron | 30.0% |
| ! | TTTTCCCACAATTTATGAAC+GGG | + | chr4.1:32000792-32000811 | MS.gene003685:intron | 30.0% |
| !! | TTCAGGTTTTCCAAATTATC+TGG | - | chr4.1:32001031-32001050 | None:intergenic | 30.0% |
| !! | TTCTTTCTGAGGTAAACAAA+AGG | - | chr4.1:32000256-32000275 | None:intergenic | 30.0% |
| !!! | ATCATGTGCTCTTTGTTTTT+GGG | + | chr4.1:32000825-32000844 | MS.gene003685:intron | 30.0% |
| !!! | GTTATATTTTAGAGTACACC+AGG | + | chr4.1:32000764-32000783 | MS.gene003685:intron | 30.0% |
| !!! | TATCATGTGCTCTTTGTTTT+TGG | + | chr4.1:32000824-32000843 | MS.gene003685:intron | 30.0% |
| !!! | TGTGCTTTGAACTTTTTCAA+AGG | + | chr4.1:32000943-32000962 | MS.gene003685:intron | 30.0% |
| ACACACTTGAATATGCTCAA+GGG | - | chr4.1:32000059-32000078 | None:intergenic | 35.0% | |
| ATATTGACCTCCTCAATTTG+TGG | - | chr4.1:32000358-32000377 | None:intergenic | 35.0% | |
| ATTCACACCTATTCTCTTCA+GGG | - | chr4.1:32000329-32000348 | None:intergenic | 35.0% | |
| ATTGTTCAGCTATCTTCTTC+AGG | - | chr4.1:32001048-32001067 | None:intergenic | 35.0% | |
| CAACAACTACAGATGACAAA+AGG | + | chr4.1:32000293-32000312 | MS.gene003685:CDS | 35.0% | |
| CAAGAATTCATGTCAGCATA+TGG | - | chr4.1:32000005-32000024 | None:intergenic | 35.0% | |
| GTTCAAAGCACATACCTAAT+TGG | - | chr4.1:32000935-32000954 | None:intergenic | 35.0% | |
| TATTGACCTCCTCAATTTGT+GGG | - | chr4.1:32000357-32000376 | None:intergenic | 35.0% | |
| TCAGAGTAAAAGAAAGAACG+AGG | - | chr4.1:32000102-32000121 | None:intergenic | 35.0% | |
| TGAGGAGGTCAATATCTTTA+AGG | + | chr4.1:32000363-32000382 | MS.gene003685:CDS | 35.0% | |
| TGTTTACCTCAGAAAGAAGA+AGG | + | chr4.1:32000258-32000277 | MS.gene003685:intron | 35.0% | |
| ! | AGGAATTGTGAAGTTTTGCT+TGG | - | chr4.1:32000082-32000101 | None:intergenic | 35.0% |
| ! | CTAATTGGTGGATAATGCTA+GGG | - | chr4.1:32000920-32000939 | None:intergenic | 35.0% |
| ! | TATGGGCTGATATTACCTTT+GGG | - | chr4.1:32000415-32000434 | None:intergenic | 35.0% |
| ! | TTATGGGCTGATATTACCTT+TGG | - | chr4.1:32000416-32000435 | None:intergenic | 35.0% |
| AACCCATGTATTAGCAGCAA+TGG | - | chr4.1:32000547-32000566 | None:intergenic | 40.0% | |
| AATTGTGGGAAAATATGCCC+TGG | - | chr4.1:32000785-32000804 | None:intergenic | 40.0% | |
| ATCCAGTTCTTAAACCCCAA+AGG | + | chr4.1:32000397-32000416 | MS.gene003685:CDS | 40.0% | |
| CAAAGCACATACCTAATTGG+TGG | - | chr4.1:32000932-32000951 | None:intergenic | 40.0% | |
| CACACTTGAATATGCTCAAG+GGG | - | chr4.1:32000058-32000077 | None:intergenic | 40.0% | |
| CATCTGTAGTTGTTGTCTTG+TGG | - | chr4.1:32000288-32000307 | None:intergenic | 40.0% | |
| CATTCACACCTATTCTCTTC+AGG | - | chr4.1:32000330-32000349 | None:intergenic | 40.0% | |
| CCTAGCATTATCCACCAATT+AGG | + | chr4.1:32000918-32000937 | MS.gene003685:CDS | 40.0% | |
| CTAGCCCGTTCATAAATTGT+GGG | - | chr4.1:32000799-32000818 | None:intergenic | 40.0% | |
| GACACACTTGAATATGCTCA+AGG | - | chr4.1:32000060-32000079 | None:intergenic | 40.0% | |
| GTCCATTGCTGCTAATACAT+GGG | + | chr4.1:32000542-32000561 | MS.gene003685:CDS | 40.0% | |
| TCAAAACGTTCAACTTGGGT+AGG | - | chr4.1:32000989-32001008 | None:intergenic | 40.0% | |
| TCTAGCCCGTTCATAAATTG+TGG | - | chr4.1:32000800-32000819 | None:intergenic | 40.0% | |
| TGAATATGCTCAAGGGGAAT+GGG | - | chr4.1:32000052-32000071 | None:intergenic | 40.0% | |
| TGTAGTTGTTGTCTTGTGGA+CGG | - | chr4.1:32000284-32000303 | None:intergenic | 40.0% | |
| TTGAATATGCTCAAGGGGAA+TGG | - | chr4.1:32000053-32000072 | None:intergenic | 40.0% | |
| TTTCACTTCTACAGAGTTGC+AGG | + | chr4.1:32000887-32000906 | MS.gene003685:intron | 40.0% | |
| ! | ATGGGCTGATATTACCTTTG+GGG | - | chr4.1:32000414-32000433 | None:intergenic | 40.0% |
| ! | CCTAATTGGTGGATAATGCT+AGG | - | chr4.1:32000921-32000940 | None:intergenic | 40.0% |
| ! | GCTAATACATGGGTTGTTAG+TGG | + | chr4.1:32000552-32000571 | MS.gene003685:CDS | 40.0% |
| !! | TACCTTTGGGGTTTAAGAAC+TGG | - | chr4.1:32000402-32000421 | None:intergenic | 40.0% |
| AGCTGAACAATTCCAGAAGC+AGG | + | chr4.1:32001057-32001076 | MS.gene003685:CDS | 45.0% | |
| CAGTCTCAAAAGTCTCTCCT+GGG | - | chr4.1:32001150-32001169 | None:intergenic | 45.0% | |
| CGTCCATTGCTGCTAATACA+TGG | + | chr4.1:32000541-32000560 | MS.gene003685:CDS | 45.0% | |
| GAATATGCTCAAGGGGAATG+GGG | - | chr4.1:32000051-32000070 | None:intergenic | 45.0% | |
| GAATGCCATCCCACAAATTG+AGG | + | chr4.1:32000345-32000364 | MS.gene003685:CDS | 45.0% | |
| TTACGGGACAACTCAACTCT+TGG | - | chr4.1:32000226-32000245 | None:intergenic | 45.0% | |
| GACCTCCTCAATTTGTGGGA+TGG | - | chr4.1:32000353-32000372 | None:intergenic | 50.0% | |
| GCAGTCTCAAAAGTCTCTCC+TGG | - | chr4.1:32001151-32001170 | None:intergenic | 50.0% | |
| TCTGTTCGAACCGGAGGAAA+GGG | + | chr4.1:31999821-31999840 | MS.gene003685:CDS | 50.0% | |
| TGCCATCCCACAAATTGAGG+AGG | + | chr4.1:32000348-32000367 | MS.gene003685:CDS | 50.0% | |
| TTCTGTTCGAACCGGAGGAA+AGG | + | chr4.1:31999820-31999839 | MS.gene003685:CDS | 50.0% | |
| ! | CAGAGCACCCTGAAGAGAAT+AGG | + | chr4.1:32000319-32000338 | MS.gene003685:CDS | 50.0% |
| !!! | GACTTTTGAGACTGCTGCTG+AGG | + | chr4.1:32001156-32001175 | MS.gene003685:CDS | 50.0% |
| !!! | TTTTGAGACTGCTGCTGAGG+AGG | + | chr4.1:32001159-32001178 | MS.gene003685:CDS | 50.0% |
| GCAGCAATGGACGCTTGAAC+TGG | - | chr4.1:32000534-32000553 | None:intergenic | 55.0% | |
| GGACGGCCTTCTTCTTTCTG+AGG | - | chr4.1:32000267-32000286 | None:intergenic | 55.0% | |
| TCTCTCCTGGGACAAGCTCT+GGG | - | chr4.1:32001138-32001157 | None:intergenic | 55.0% | |
| TCTGACGGTACCCTTTCCTC+CGG | - | chr4.1:31999834-31999853 | None:intergenic | 55.0% | |
| ! | ATGGCCGGTTCTGTTCGAAC+CGG | + | chr4.1:31999812-31999831 | MS.gene003685:CDS | 55.0% |
| ! | TCCTCCGGTTCGAACAGAAC+CGG | - | chr4.1:31999819-31999838 | None:intergenic | 55.0% |
| !! | GAGGAAAGGGTACCGTCAGA+AGG | + | chr4.1:31999834-31999853 | MS.gene003685:CDS | 55.0% |
| CAGAAGCAGGCTCCTGAAGC+AGG | + | chr4.1:32001070-32001089 | MS.gene003685:CDS | 60.0% | |
| CTGCTTCAGGAGCCTGCTTC+TGG | - | chr4.1:32001072-32001091 | None:intergenic | 60.0% | |
| GATGTCCCAGAGCTTGTCCC+AGG | + | chr4.1:32001130-32001149 | MS.gene003685:CDS | 60.0% | |
| GCTGAACCAGCACCTGCTTC+AGG | - | chr4.1:32001085-32001104 | None:intergenic | 60.0% | |
| GTCTCTCCTGGGACAAGCTC+TGG | - | chr4.1:32001139-32001158 | None:intergenic | 60.0% | |
| CAGGCTCCTGAAGCAGGTGC+TGG | + | chr4.1:32001076-32001095 | MS.gene003685:CDS | 65.0% | |
| GACTGCTGCTGAGGAGGCCA+AGG | + | chr4.1:32001165-32001184 | MS.gene003685:CDS | 65.0% | |
| ! | GCCGGTTCTGTTCGAACCGG+AGG | + | chr4.1:31999815-31999834 | MS.gene003685:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 31999812 | 32001195 | 31999812 | ID=MS.gene003685 |
| chr4.1 | mRNA | 31999812 | 32001195 | 31999812 | ID=MS.gene003685.t1;Parent=MS.gene003685 |
| chr4.1 | exon | 31999812 | 31999855 | 31999812 | ID=MS.gene003685.t1.exon1;Parent=MS.gene003685.t1 |
| chr4.1 | CDS | 31999812 | 31999855 | 31999812 | ID=cds.MS.gene003685.t1;Parent=MS.gene003685.t1 |
| chr4.1 | exon | 32000270 | 32000418 | 32000270 | ID=MS.gene003685.t1.exon2;Parent=MS.gene003685.t1 |
| chr4.1 | CDS | 32000270 | 32000418 | 32000270 | ID=cds.MS.gene003685.t1;Parent=MS.gene003685.t1 |
| chr4.1 | exon | 32000535 | 32000591 | 32000535 | ID=MS.gene003685.t1.exon3;Parent=MS.gene003685.t1 |
| chr4.1 | CDS | 32000535 | 32000591 | 32000535 | ID=cds.MS.gene003685.t1;Parent=MS.gene003685.t1 |
| chr4.1 | exon | 32000901 | 32000939 | 32000901 | ID=MS.gene003685.t1.exon4;Parent=MS.gene003685.t1 |
| chr4.1 | CDS | 32000901 | 32000939 | 32000901 | ID=cds.MS.gene003685.t1;Parent=MS.gene003685.t1 |
| chr4.1 | exon | 32001026 | 32001195 | 32001026 | ID=MS.gene003685.t1.exon5;Parent=MS.gene003685.t1 |
| chr4.1 | CDS | 32001026 | 32001195 | 32001026 | ID=cds.MS.gene003685.t1;Parent=MS.gene003685.t1 |
| Gene Sequence |
| Protein sequence |
