Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23317.t1 | XP_003606991.2 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 3.70E-70 | 274.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23317.t1 | Q9SMW7 | 77.7 | 157 | 33 | 2 | 1 | 156 | 1 | 156 | 5.3e-57 | 221.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23317.t1 | B7FMW7 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 2.7e-70 | 274.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene23317 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene053224 | MS.gene23317 | 0.813587 | 2.37E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23317 | MS.gene73089 | PPI |
| MS.gene003685 | MS.gene23317 | PPI |
| MS.gene23317 | MS.gene068093 | PPI |
| MS.gene23317 | MS.gene41901 | PPI |
| MS.gene044693 | MS.gene23317 | PPI |
| MS.gene23317 | MS.gene50742 | PPI |
| MS.gene23317 | MS.gene039827 | PPI |
| MS.gene23317 | MS.gene41902 | PPI |
| MS.gene23317 | MS.gene003688 | PPI |
| MS.gene23317 | MS.gene42247 | PPI |
| MS.gene23317 | MS.gene044693 | PPI |
| MS.gene23317 | MS.gene013940 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23317.t1 | MTR_4g071000 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 9.36e-115 | 322 |
| MS.gene23317.t1 | MTR_3g020660 | 89.241 | 158 | 17 | 0 | 1 | 158 | 1 | 158 | 1.39e-101 | 288 |
| MS.gene23317.t1 | MTR_3g020520 | 82.787 | 122 | 21 | 0 | 37 | 158 | 404 | 525 | 9.39e-66 | 209 |
| MS.gene23317.t1 | MTR_3g020640 | 72.593 | 135 | 30 | 1 | 24 | 158 | 1003 | 1130 | 1.35e-58 | 196 |
| MS.gene23317.t1 | MTR_3g020650 | 76.471 | 85 | 20 | 0 | 38 | 122 | 1028 | 1112 | 2.40e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23317.t1 | AT1G17880 | 86.755 | 151 | 18 | 2 | 1 | 150 | 1 | 150 | 1.15e-91 | 263 |
| MS.gene23317.t1 | AT1G73230 | 85.987 | 157 | 21 | 1 | 1 | 156 | 1 | 157 | 6.41e-87 | 251 |
Find 52 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGAGGTTAATATCTTTA+AGG | 0.165061 | 4.4:+37563787 | MS.gene23317:CDS |
| CTGCTTCAGGAGCCTGCTTC+TGG | 0.192683 | 4.4:-37564493 | None:intergenic |
| TAATTTCTTACTCTTTGTTT+GGG | 0.224790 | 4.4:-37564004 | None:intergenic |
| GTAATTTCTTACTCTTTGTT+TGG | 0.245420 | 4.4:-37564005 | None:intergenic |
| CATTCACACCTATTCTCTTC+AGG | 0.292092 | 4.4:-37563751 | None:intergenic |
| ATTGTTCAGCTATCTTCTTC+AGG | 0.297553 | 4.4:-37564469 | None:intergenic |
| TTTCACTTCTACAGAGTTGC+AGG | 0.308571 | 4.4:+37564311 | MS.gene23317:intron |
| GTTCAAAGCACATACCTAAT+TGG | 0.327309 | 4.4:-37564356 | None:intergenic |
| GCTGAACCAGCACCTGCTTC+AGG | 0.334925 | 4.4:-37564506 | None:intergenic |
| GTCTCTCCTGGGACAAGCTC+TGG | 0.335105 | 4.4:-37564560 | None:intergenic |
| CCTAGCATTATCCACCAATT+AGG | 0.352096 | 4.4:+37564342 | MS.gene23317:CDS |
| TACCTTTGGGGTTTAAGAAC+TGG | 0.359158 | 4.4:-37563823 | None:intergenic |
| CGTCCATTGCTGCTAATACA+TGG | 0.419485 | 4.4:+37563965 | MS.gene23317:CDS |
| GCTGTCTCAAAAGTCTCTCC+TGG | 0.443808 | 4.4:-37564572 | None:intergenic |
| ATTCACACCTATTCTCTTCA+GGG | 0.451011 | 4.4:-37563750 | None:intergenic |
| TATTAACCTCCTCAATTTGT+GGG | 0.452604 | 4.4:-37563778 | None:intergenic |
| ATGGGCTGATATTACCTTTG+GGG | 0.456873 | 4.4:-37563835 | None:intergenic |
| CAGAAGCAGGCTCCTGAAGC+AGG | 0.458056 | 4.4:+37564494 | MS.gene23317:CDS |
| TCCTCCGGTTCGAACAGAAC+CGG | 0.461978 | 4.4:-37563238 | None:intergenic |
| CAGAGCACCCTGAAGAGAAT+AGG | 0.468639 | 4.4:+37563743 | MS.gene23317:CDS |
| ATAACAAATCTAACTATCCT+TGG | 0.472981 | 4.4:-37564606 | None:intergenic |
| TGTTTACCTCAGAAAGAAGA+AGG | 0.477565 | 4.4:+37563682 | MS.gene23317:intron |
| TCTGTTCGAACCGGAGGAAA+GGG | 0.482236 | 4.4:+37563243 | MS.gene23317:CDS |
| ATATTAACCTCCTCAATTTG+TGG | 0.484190 | 4.4:-37563779 | None:intergenic |
| CAGGCTCCTGAAGCAGGTGC+TGG | 0.494992 | 4.4:+37564500 | MS.gene23317:CDS |
| AGCTGAACAATTCCAGAAGC+AGG | 0.497000 | 4.4:+37564481 | MS.gene23317:CDS |
| CCTAATTGGTGGATAATGCT+AGG | 0.497579 | 4.4:-37564342 | None:intergenic |
| CAACAACTACAGATGACAAA+AGG | 0.502653 | 4.4:+37563717 | MS.gene23317:CDS |
| GATGTCCCAGAGCTTGTCCC+AGG | 0.514432 | 4.4:+37564554 | MS.gene23317:CDS |
| AACCTCCTCAATTTGTGGGA+TGG | 0.523460 | 4.4:-37563774 | None:intergenic |
| CATCTGTAGTTGTTGTCTTG+TGG | 0.525038 | 4.4:-37563709 | None:intergenic |
| TTCTGTTCGAACCGGAGGAA+AGG | 0.525397 | 4.4:+37563242 | MS.gene23317:CDS |
| GCTAATACATGGGTTGTTAG+TGG | 0.526432 | 4.4:+37563976 | MS.gene23317:CDS |
| TCTCTCCTGGGACAAGCTCT+GGG | 0.528395 | 4.4:-37564559 | None:intergenic |
| GAATGCCATCCCACAAATTG+AGG | 0.534495 | 4.4:+37563769 | MS.gene23317:CDS |
| AACCCATGTATTAGCAGCAA+TGG | 0.539996 | 4.4:-37563968 | None:intergenic |
| GACAGCTGCTGAGGAGGCCA+AGG | 0.540301 | 4.4:+37564589 | MS.gene23317:CDS |
| TCTGACGGTACCCTTTCCTC+CGG | 0.545452 | 4.4:-37563253 | None:intergenic |
| AATTTCTTACTCTTTGTTTG+GGG | 0.553423 | 4.4:-37564003 | None:intergenic |
| TGTAGTTGTTGTCTTGTGGA+CGG | 0.561453 | 4.4:-37563705 | None:intergenic |
| CTAATTGGTGGATAATGCTA+GGG | 0.563275 | 4.4:-37564341 | None:intergenic |
| ATGGCCGGTTCTGTTCGAAC+CGG | 0.568678 | 4.4:+37563234 | MS.gene23317:CDS |
| GCCGGTTCTGTTCGAACCGG+AGG | 0.569814 | 4.4:+37563237 | MS.gene23317:CDS |
| CTGTCTCAAAAGTCTCTCCT+GGG | 0.571093 | 4.4:-37564571 | None:intergenic |
| GTCCATTGCTGCTAATACAT+GGG | 0.579320 | 4.4:+37563966 | MS.gene23317:CDS |
| ATCCAGTTCTTAAACCCCAA+AGG | 0.585033 | 4.4:+37563821 | MS.gene23317:CDS |
| GAAAAGTTGATGAAGATGGC+CGG | 0.594138 | 4.4:+37563219 | MS.gene23317:CDS |
| TCGTGAAAAGTTGATGAAGA+TGG | 0.598987 | 4.4:+37563215 | MS.gene23317:CDS |
| CAAAGCACATACCTAATTGG+TGG | 0.599520 | 4.4:-37564353 | None:intergenic |
| GAGGAAAGGGTACCGTCAGA+AGG | 0.619370 | 4.4:+37563256 | MS.gene23317:CDS |
| CATATAAATATACCTTCTGA+CGG | 0.639530 | 4.4:-37563268 | None:intergenic |
| TGCCATCCCACAAATTGAGG+AGG | 0.649748 | 4.4:+37563772 | MS.gene23317:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATTATTAAAAAAC+AGG | + | chr4.4:37564428-37564447 | MS.gene23317:intron | 10.0% |
| !!! | ATTTATTCTTTTTATATGAT+AGG | + | chr4.4:37563870-37563889 | MS.gene23317:intron | 10.0% |
| !! | AAAAACAAGTTATATTAGAA+TGG | - | chr4.4:37563310-37563329 | None:intergenic | 15.0% |
| !!! | AATATTTTAGATATATCTGT+CGG | + | chr4.4:37563375-37563394 | MS.gene23317:intron | 15.0% |
| !!! | GAAATTAATATGTCAATTTT+AGG | - | chr4.4:37564295-37564314 | None:intergenic | 15.0% |
| !! | AAGAAACATTCTTTAAACAA+TGG | - | chr4.4:37563576-37563595 | None:intergenic | 20.0% |
| !! | AATAAATGCTGGAAATATTA+TGG | - | chr4.4:37563857-37563876 | None:intergenic | 20.0% |
| !! | AATACTTTAAATGAAAACTC+TGG | + | chr4.4:37564103-37564122 | MS.gene23317:intron | 20.0% |
| !! | ATAAATGCTGGAAATATTAT+GGG | - | chr4.4:37563856-37563875 | None:intergenic | 20.0% |
| !! | CAATAGATATATGAAGAAAA+AGG | - | chr4.4:37564033-37564052 | None:intergenic | 20.0% |
| !! | CATATAAAAAGAATAAATGC+TGG | - | chr4.4:37563868-37563887 | None:intergenic | 20.0% |
| !! | TTTATATGTGAAACTCATTA+TGG | + | chr4.4:37563283-37563302 | MS.gene23317:intron | 20.0% |
| !!! | TAATTTCTTACTCTTTGTTT+GGG | - | chr4.4:37564007-37564026 | None:intergenic | 20.0% |
| ! | AAACAAAAGGCAGAAAATTA+CGG | - | chr4.4:37563667-37563686 | None:intergenic | 25.0% |
| ! | AATATTCAAAACGTTCAACT+TGG | - | chr4.4:37564418-37564437 | None:intergenic | 25.0% |
| ! | AGAAAACAATCAAAGCTTAA+TGG | - | chr4.4:37563933-37563952 | None:intergenic | 25.0% |
| ! | ATATTCAAAACGTTCAACTT+GGG | - | chr4.4:37564417-37564436 | None:intergenic | 25.0% |
| ! | CAATGCTATACAACTAATAT+TGG | - | chr4.4:37563343-37563362 | None:intergenic | 25.0% |
| ! | CATATAAATATACCTTCTGA+CGG | - | chr4.4:37563271-37563290 | None:intergenic | 25.0% |
| ! | GTAATTTCTTACTCTTTGTT+TGG | - | chr4.4:37564008-37564027 | None:intergenic | 25.0% |
| !! | AATTTCTTACTCTTTGTTTG+GGG | - | chr4.4:37564006-37564025 | None:intergenic | 25.0% |
| !! | ATTTTCCCACAATTTATGAA+CGG | + | chr4.4:37564215-37564234 | MS.gene23317:intron | 25.0% |
| !!! | AACTTTTTCAAAGGTTTGTT+TGG | + | chr4.4:37564376-37564395 | MS.gene23317:intron | 25.0% |
| !!! | TTATATTTTAGAGTACACCA+GGG | + | chr4.4:37564189-37564208 | MS.gene23317:intron | 25.0% |
| AAAAACAGGACCAGATAATT+TGG | + | chr4.4:37564442-37564461 | MS.gene23317:intron | 30.0% | |
| AAAATGAACAGATTCAGCAT+AGG | - | chr4.4:37564151-37564170 | None:intergenic | 30.0% | |
| AACAAAAGGCAGAAAATTAC+GGG | - | chr4.4:37563666-37563685 | None:intergenic | 30.0% | |
| ATATTAACCTCCTCAATTTG+TGG | - | chr4.4:37563782-37563801 | None:intergenic | 30.0% | |
| TATTAACCTCCTCAATTTGT+GGG | - | chr4.4:37563781-37563800 | None:intergenic | 30.0% | |
| TGAGGAGGTTAATATCTTTA+AGG | + | chr4.4:37563787-37563806 | MS.gene23317:CDS | 30.0% | |
| ! | ATATCTGTCGGTTGTTATTA+GGG | + | chr4.4:37563387-37563406 | MS.gene23317:intron | 30.0% |
| ! | ATCATTTTCTTCTTGTACAG+TGG | - | chr4.4:37564531-37564550 | None:intergenic | 30.0% |
| ! | TATATCTGTCGGTTGTTATT+AGG | + | chr4.4:37563386-37563405 | MS.gene23317:intron | 30.0% |
| ! | TCTGTTCATTTTGCAATATC+TGG | + | chr4.4:37564159-37564178 | MS.gene23317:intron | 30.0% |
| ! | TTTTCCCACAATTTATGAAC+GGG | + | chr4.4:37564216-37564235 | MS.gene23317:intron | 30.0% |
| !! | TTCAGGTTTTCCAAATTATC+TGG | - | chr4.4:37564455-37564474 | None:intergenic | 30.0% |
| !! | TTCTTTCTGAGGTAAACAAA+AGG | - | chr4.4:37563680-37563699 | None:intergenic | 30.0% |
| !!! | ATCATGTGCTCTTTGTTTTT+GGG | + | chr4.4:37564249-37564268 | MS.gene23317:intron | 30.0% |
| !!! | GTTATATTTTAGAGTACACC+AGG | + | chr4.4:37564188-37564207 | MS.gene23317:intron | 30.0% |
| !!! | TATCATGTGCTCTTTGTTTT+TGG | + | chr4.4:37564248-37564267 | MS.gene23317:intron | 30.0% |
| !!! | TGTGCTTTGAACTTTTTCAA+AGG | + | chr4.4:37564367-37564386 | MS.gene23317:intron | 30.0% |
| ACACACTCGAATATGCTTAA+GGG | - | chr4.4:37563481-37563500 | None:intergenic | 35.0% | |
| ATTCACACCTATTCTCTTCA+GGG | - | chr4.4:37563753-37563772 | None:intergenic | 35.0% | |
| ATTGTTCAGCTATCTTCTTC+AGG | - | chr4.4:37564472-37564491 | None:intergenic | 35.0% | |
| CAACAACTACAGATGACAAA+AGG | + | chr4.4:37563717-37563736 | MS.gene23317:CDS | 35.0% | |
| CAAGAATTCATGTCAGCATA+TGG | - | chr4.4:37563427-37563446 | None:intergenic | 35.0% | |
| GTTCAAAGCACATACCTAAT+TGG | - | chr4.4:37564359-37564378 | None:intergenic | 35.0% | |
| TCAGAGTAAAAGAAAGAACG+AGG | - | chr4.4:37563524-37563543 | None:intergenic | 35.0% | |
| TGTTTACCTCAGAAAGAAGA+AGG | + | chr4.4:37563682-37563701 | MS.gene23317:intron | 35.0% | |
| ! | AGGAATTGTGAAGTTTTGCT+TGG | - | chr4.4:37563504-37563523 | None:intergenic | 35.0% |
| ! | CTAATTGGTGGATAATGCTA+GGG | - | chr4.4:37564344-37564363 | None:intergenic | 35.0% |
| ! | TATGGGCTGATATTACCTTT+GGG | - | chr4.4:37563839-37563858 | None:intergenic | 35.0% |
| ! | TTATGGGCTGATATTACCTT+TGG | - | chr4.4:37563840-37563859 | None:intergenic | 35.0% |
| !! | TCGTGAAAAGTTGATGAAGA+TGG | + | chr4.4:37563215-37563234 | MS.gene23317:CDS | 35.0% |
| AACCCATGTATTAGCAGCAA+TGG | - | chr4.4:37563971-37563990 | None:intergenic | 40.0% | |
| AATTGTGGGAAAATATGCCC+TGG | - | chr4.4:37564209-37564228 | None:intergenic | 40.0% | |
| ATCCAGTTCTTAAACCCCAA+AGG | + | chr4.4:37563821-37563840 | MS.gene23317:CDS | 40.0% | |
| CAAAGCACATACCTAATTGG+TGG | - | chr4.4:37564356-37564375 | None:intergenic | 40.0% | |
| CACACTCGAATATGCTTAAG+GGG | - | chr4.4:37563480-37563499 | None:intergenic | 40.0% | |
| CATCTGTAGTTGTTGTCTTG+TGG | - | chr4.4:37563712-37563731 | None:intergenic | 40.0% | |
| CATTCACACCTATTCTCTTC+AGG | - | chr4.4:37563754-37563773 | None:intergenic | 40.0% | |
| CCTAGCATTATCCACCAATT+AGG | + | chr4.4:37564342-37564361 | MS.gene23317:CDS | 40.0% | |
| CGAATATGCTTAAGGGGAAT+GGG | - | chr4.4:37563474-37563493 | None:intergenic | 40.0% | |
| CTAGCCCGTTCATAAATTGT+GGG | - | chr4.4:37564223-37564242 | None:intergenic | 40.0% | |
| GAATATGCTTAAGGGGAATG+GGG | - | chr4.4:37563473-37563492 | None:intergenic | 40.0% | |
| GACACACTCGAATATGCTTA+AGG | - | chr4.4:37563482-37563501 | None:intergenic | 40.0% | |
| GTCCATTGCTGCTAATACAT+GGG | + | chr4.4:37563966-37563985 | MS.gene23317:CDS | 40.0% | |
| TCAAAACGTTCAACTTGGGT+AGG | - | chr4.4:37564413-37564432 | None:intergenic | 40.0% | |
| TCGAATATGCTTAAGGGGAA+TGG | - | chr4.4:37563475-37563494 | None:intergenic | 40.0% | |
| TCTAGCCCGTTCATAAATTG+TGG | - | chr4.4:37564224-37564243 | None:intergenic | 40.0% | |
| TGTAGTTGTTGTCTTGTGGA+CGG | - | chr4.4:37563708-37563727 | None:intergenic | 40.0% | |
| TTTCACTTCTACAGAGTTGC+AGG | + | chr4.4:37564311-37564330 | MS.gene23317:intron | 40.0% | |
| ! | ATGGGCTGATATTACCTTTG+GGG | - | chr4.4:37563838-37563857 | None:intergenic | 40.0% |
| ! | CCTAATTGGTGGATAATGCT+AGG | - | chr4.4:37564345-37564364 | None:intergenic | 40.0% |
| ! | GCTAATACATGGGTTGTTAG+TGG | + | chr4.4:37563976-37563995 | MS.gene23317:CDS | 40.0% |
| !! | GAAAAGTTGATGAAGATGGC+CGG | + | chr4.4:37563219-37563238 | MS.gene23317:CDS | 40.0% |
| !! | TACCTTTGGGGTTTAAGAAC+TGG | - | chr4.4:37563826-37563845 | None:intergenic | 40.0% |
| AACCTCCTCAATTTGTGGGA+TGG | - | chr4.4:37563777-37563796 | None:intergenic | 45.0% | |
| AGCTGAACAATTCCAGAAGC+AGG | + | chr4.4:37564481-37564500 | MS.gene23317:CDS | 45.0% | |
| CGTCCATTGCTGCTAATACA+TGG | + | chr4.4:37563965-37563984 | MS.gene23317:CDS | 45.0% | |
| CTGTCTCAAAAGTCTCTCCT+GGG | - | chr4.4:37564574-37564593 | None:intergenic | 45.0% | |
| GAATGCCATCCCACAAATTG+AGG | + | chr4.4:37563769-37563788 | MS.gene23317:CDS | 45.0% | |
| TTACGGGACAACTCAACTCT+TGG | - | chr4.4:37563650-37563669 | None:intergenic | 45.0% | |
| GCTGTCTCAAAAGTCTCTCC+TGG | - | chr4.4:37564575-37564594 | None:intergenic | 50.0% | |
| TCTGTTCGAACCGGAGGAAA+GGG | + | chr4.4:37563243-37563262 | MS.gene23317:CDS | 50.0% | |
| TGCCATCCCACAAATTGAGG+AGG | + | chr4.4:37563772-37563791 | MS.gene23317:CDS | 50.0% | |
| TTCTGTTCGAACCGGAGGAA+AGG | + | chr4.4:37563242-37563261 | MS.gene23317:CDS | 50.0% | |
| ! | CAGAGCACCCTGAAGAGAAT+AGG | + | chr4.4:37563743-37563762 | MS.gene23317:CDS | 50.0% |
| !!! | GACTTTTGAGACAGCTGCTG+AGG | + | chr4.4:37564580-37564599 | MS.gene23317:CDS | 50.0% |
| !!! | TTTTGAGACAGCTGCTGAGG+AGG | + | chr4.4:37564583-37564602 | MS.gene23317:CDS | 50.0% |
| GCAGCAATGGACGCTTGAAC+TGG | - | chr4.4:37563958-37563977 | None:intergenic | 55.0% | |
| GGACGGCCTTCTTCTTTCTG+AGG | - | chr4.4:37563691-37563710 | None:intergenic | 55.0% | |
| TCTCTCCTGGGACAAGCTCT+GGG | - | chr4.4:37564562-37564581 | None:intergenic | 55.0% | |
| TCTGACGGTACCCTTTCCTC+CGG | - | chr4.4:37563256-37563275 | None:intergenic | 55.0% | |
| ! | ATGGCCGGTTCTGTTCGAAC+CGG | + | chr4.4:37563234-37563253 | MS.gene23317:CDS | 55.0% |
| ! | TCCTCCGGTTCGAACAGAAC+CGG | - | chr4.4:37563241-37563260 | None:intergenic | 55.0% |
| !! | GAGGAAAGGGTACCGTCAGA+AGG | + | chr4.4:37563256-37563275 | MS.gene23317:CDS | 55.0% |
| CAGAAGCAGGCTCCTGAAGC+AGG | + | chr4.4:37564494-37564513 | MS.gene23317:CDS | 60.0% | |
| CTGCTTCAGGAGCCTGCTTC+TGG | - | chr4.4:37564496-37564515 | None:intergenic | 60.0% | |
| GATGTCCCAGAGCTTGTCCC+AGG | + | chr4.4:37564554-37564573 | MS.gene23317:CDS | 60.0% | |
| GCTGAACCAGCACCTGCTTC+AGG | - | chr4.4:37564509-37564528 | None:intergenic | 60.0% | |
| GTCTCTCCTGGGACAAGCTC+TGG | - | chr4.4:37564563-37564582 | None:intergenic | 60.0% | |
| CAGGCTCCTGAAGCAGGTGC+TGG | + | chr4.4:37564500-37564519 | MS.gene23317:CDS | 65.0% | |
| GACAGCTGCTGAGGAGGCCA+AGG | + | chr4.4:37564589-37564608 | MS.gene23317:CDS | 65.0% | |
| ! | GCCGGTTCTGTTCGAACCGG+AGG | + | chr4.4:37563237-37563256 | MS.gene23317:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37563210 | 37564619 | 37563210 | ID=MS.gene23317 |
| chr4.4 | mRNA | 37563210 | 37564619 | 37563210 | ID=MS.gene23317.t1;Parent=MS.gene23317 |
| chr4.4 | exon | 37563210 | 37563277 | 37563210 | ID=MS.gene23317.t1.exon1;Parent=MS.gene23317.t1 |
| chr4.4 | CDS | 37563210 | 37563277 | 37563210 | ID=cds.MS.gene23317.t1;Parent=MS.gene23317.t1 |
| chr4.4 | exon | 37563694 | 37563842 | 37563694 | ID=MS.gene23317.t1.exon2;Parent=MS.gene23317.t1 |
| chr4.4 | CDS | 37563694 | 37563842 | 37563694 | ID=cds.MS.gene23317.t1;Parent=MS.gene23317.t1 |
| chr4.4 | exon | 37563959 | 37564015 | 37563959 | ID=MS.gene23317.t1.exon3;Parent=MS.gene23317.t1 |
| chr4.4 | CDS | 37563959 | 37564015 | 37563959 | ID=cds.MS.gene23317.t1;Parent=MS.gene23317.t1 |
| chr4.4 | exon | 37564325 | 37564363 | 37564325 | ID=MS.gene23317.t1.exon4;Parent=MS.gene23317.t1 |
| chr4.4 | CDS | 37564325 | 37564363 | 37564325 | ID=cds.MS.gene23317.t1;Parent=MS.gene23317.t1 |
| chr4.4 | exon | 37564450 | 37564619 | 37564450 | ID=MS.gene23317.t1.exon5;Parent=MS.gene23317.t1 |
| chr4.4 | CDS | 37564450 | 37564619 | 37564450 | ID=cds.MS.gene23317.t1;Parent=MS.gene23317.t1 |
| Gene Sequence |
| Protein sequence |
