Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50742.t1 | XP_003606991.2 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 3.70E-70 | 274.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50742.t1 | Q9SMW7 | 77.7 | 157 | 33 | 2 | 1 | 156 | 1 | 156 | 5.3e-57 | 221.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50742.t1 | B7FMW7 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 2.7e-70 | 274.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50742 | MS.gene039827 | PPI |
| MS.gene50742 | MS.gene42247 | PPI |
| MS.gene068093 | MS.gene50742 | PPI |
| MS.gene013940 | MS.gene50742 | PPI |
| MS.gene73089 | MS.gene50742 | PPI |
| MS.gene50742 | MS.gene41902 | PPI |
| MS.gene039827 | MS.gene50742 | PPI |
| MS.gene003688 | MS.gene50742 | PPI |
| MS.gene23317 | MS.gene50742 | PPI |
| MS.gene003685 | MS.gene50742 | PPI |
| MS.gene41901 | MS.gene50742 | PPI |
| MS.gene044693 | MS.gene50742 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50742.t1 | MTR_4g071000 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 9.36e-115 | 322 |
| MS.gene50742.t1 | MTR_3g020660 | 89.241 | 158 | 17 | 0 | 1 | 158 | 1 | 158 | 1.39e-101 | 288 |
| MS.gene50742.t1 | MTR_3g020520 | 82.787 | 122 | 21 | 0 | 37 | 158 | 404 | 525 | 9.39e-66 | 209 |
| MS.gene50742.t1 | MTR_3g020640 | 72.593 | 135 | 30 | 1 | 24 | 158 | 1003 | 1130 | 1.35e-58 | 196 |
| MS.gene50742.t1 | MTR_3g020650 | 76.471 | 85 | 20 | 0 | 38 | 122 | 1028 | 1112 | 2.40e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50742.t1 | AT1G17880 | 86.755 | 151 | 18 | 2 | 1 | 150 | 1 | 150 | 1.15e-91 | 263 |
| MS.gene50742.t1 | AT1G73230 | 85.987 | 157 | 21 | 1 | 1 | 156 | 1 | 157 | 6.41e-87 | 251 |
Find 50 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTCAGGAGCCTGCTTC+TGG | 0.192683 | 4.3:-34254424 | None:intergenic |
| TGAGGAGGTCAATATCTTTA+AGG | 0.219626 | 4.3:+34253718 | MS.gene50742:CDS |
| TAATTTCTTACTCTTTGTTT+GGG | 0.224790 | 4.3:-34253935 | None:intergenic |
| GTAATTTCTTACTCTTTGTT+TGG | 0.245420 | 4.3:-34253936 | None:intergenic |
| CATTCACACCTATTCTCTTC+AGG | 0.292092 | 4.3:-34253682 | None:intergenic |
| ATTGTTCAGCTATCTTCTTC+AGG | 0.297553 | 4.3:-34254400 | None:intergenic |
| TTTCACTTCTACAGAGTTGC+AGG | 0.308571 | 4.3:+34254242 | MS.gene50742:intron |
| GTTCAAAGCACATACCTAAT+TGG | 0.327309 | 4.3:-34254287 | None:intergenic |
| GCTGAACCAGCACCTGCTTC+AGG | 0.334925 | 4.3:-34254437 | None:intergenic |
| GTCTCTCCTGGGACAAGCTC+TGG | 0.335105 | 4.3:-34254491 | None:intergenic |
| CCTAGCATTATCCACCAATT+AGG | 0.352096 | 4.3:+34254273 | MS.gene50742:CDS |
| TACCTTTGGGGTTTAAGAAC+TGG | 0.359158 | 4.3:-34253754 | None:intergenic |
| TCCTCCAGTTCGAACAGAAC+CGG | 0.412678 | 4.3:-34253170 | None:intergenic |
| CGTCCATTGCTGCTAATACA+TGG | 0.419485 | 4.3:+34253896 | MS.gene50742:CDS |
| GCTGTCTCAAAAGTCTCTCC+TGG | 0.443808 | 4.3:-34254503 | None:intergenic |
| ATTCACACCTATTCTCTTCA+GGG | 0.451011 | 4.3:-34253681 | None:intergenic |
| TATTGACCTCCTCAATTTGT+GGG | 0.452604 | 4.3:-34253709 | None:intergenic |
| ATGGGCTGATATTACCTTTG+GGG | 0.456873 | 4.3:-34253766 | None:intergenic |
| CAGAAGCAGGCTCCTGAAGC+AGG | 0.458056 | 4.3:+34254425 | MS.gene50742:CDS |
| CAGAGCACCCTGAAGAGAAT+AGG | 0.468639 | 4.3:+34253674 | MS.gene50742:CDS |
| ATAACAAATCTAACTATCCT+TGG | 0.472981 | 4.3:-34254537 | None:intergenic |
| TGTTTACCTCAGAAAGAAGA+AGG | 0.477565 | 4.3:+34253613 | MS.gene50742:intron |
| CAGGCTCCTGAAGCAGGTGC+TGG | 0.494992 | 4.3:+34254431 | MS.gene50742:CDS |
| AGCTGAACAATTCCAGAAGC+AGG | 0.497000 | 4.3:+34254412 | MS.gene50742:CDS |
| CCTAATTGGTGGATAATGCT+AGG | 0.497579 | 4.3:-34254273 | None:intergenic |
| ATATTGACCTCCTCAATTTG+TGG | 0.501827 | 4.3:-34253710 | None:intergenic |
| CAACAACTACAGATGACAAA+AGG | 0.502653 | 4.3:+34253648 | MS.gene50742:CDS |
| GATGTCCCAGAGCTTGTCCC+AGG | 0.514432 | 4.3:+34254485 | MS.gene50742:CDS |
| ATGGCCGGTTCTGTTCGAAC+TGG | 0.516050 | 4.3:+34253166 | MS.gene50742:CDS |
| GACCTCCTCAATTTGTGGGA+TGG | 0.524360 | 4.3:-34253705 | None:intergenic |
| CATCTGTAGTTGTTGTCTTG+TGG | 0.525038 | 4.3:-34253640 | None:intergenic |
| GCTAATACATGGGTTGTTAG+TGG | 0.526432 | 4.3:+34253907 | MS.gene50742:CDS |
| TCTCTCCTGGGACAAGCTCT+GGG | 0.528395 | 4.3:-34254490 | None:intergenic |
| GAATGCCATCCCACAAATTG+AGG | 0.534495 | 4.3:+34253700 | MS.gene50742:CDS |
| AACCCATGTATTAGCAGCAA+TGG | 0.539996 | 4.3:-34253899 | None:intergenic |
| GACAGCTGCTGAGGAGGCCA+AGG | 0.540301 | 4.3:+34254520 | MS.gene50742:CDS |
| TTCTGTTCGAACTGGAGGAA+AGG | 0.541111 | 4.3:+34253174 | MS.gene50742:CDS |
| TCTGTTCGAACTGGAGGAAA+GGG | 0.543955 | 4.3:+34253175 | MS.gene50742:CDS |
| GCCGGTTCTGTTCGAACTGG+AGG | 0.553108 | 4.3:+34253169 | MS.gene50742:CDS |
| AATTTCTTACTCTTTGTTTG+GGG | 0.553423 | 4.3:-34253934 | None:intergenic |
| TGTAGTTGTTGTCTTGTGGA+CGG | 0.561453 | 4.3:-34253636 | None:intergenic |
| CTAATTGGTGGATAATGCTA+GGG | 0.563275 | 4.3:-34254272 | None:intergenic |
| CTGTCTCAAAAGTCTCTCCT+GGG | 0.571093 | 4.3:-34254502 | None:intergenic |
| GTCCATTGCTGCTAATACAT+GGG | 0.579320 | 4.3:+34253897 | MS.gene50742:CDS |
| ATCCAGTTCTTAAACCCCAA+AGG | 0.585033 | 4.3:+34253752 | MS.gene50742:CDS |
| GAAAAGTTGATGAAGATGGC+CGG | 0.594138 | 4.3:+34253151 | MS.gene50742:CDS |
| TCGTGAAAAGTTGATGAAGA+TGG | 0.598987 | 4.3:+34253147 | MS.gene50742:CDS |
| CAAAGCACATACCTAATTGG+TGG | 0.599520 | 4.3:-34254284 | None:intergenic |
| GAGGAAAGGGTACTGTCAGA+AGG | 0.636389 | 4.3:+34253188 | MS.gene50742:CDS |
| TGCCATCCCACAAATTGAGG+AGG | 0.645011 | 4.3:+34253703 | MS.gene50742:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATTATTAAAAAAC+AGG | + | chr4.3:34254359-34254378 | MS.gene50742:intron | 10.0% |
| !!! | ATTTATTCTTTTTATATGAT+AGG | + | chr4.3:34253801-34253820 | MS.gene50742:intron | 10.0% |
| !! | AAAAACAAGTTATATTAGAA+TGG | - | chr4.3:34253242-34253261 | None:intergenic | 15.0% |
| !!! | AATATTTTAGATATATCTGT+CGG | + | chr4.3:34253307-34253326 | MS.gene50742:intron | 15.0% |
| !!! | GAAATTAATATGTCAATTTT+AGG | - | chr4.3:34254226-34254245 | None:intergenic | 15.0% |
| !! | AAGAAACATTCTTTAAACAA+TGG | - | chr4.3:34253507-34253526 | None:intergenic | 20.0% |
| !! | AATAAATGCTGGAAATATTA+TGG | - | chr4.3:34253788-34253807 | None:intergenic | 20.0% |
| !! | AATACTTTAAATGAAAACTC+TGG | + | chr4.3:34254034-34254053 | MS.gene50742:intron | 20.0% |
| !! | ATAAATGCTGGAAATATTAT+GGG | - | chr4.3:34253787-34253806 | None:intergenic | 20.0% |
| !! | CAATAGATATATGAAGAAAA+AGG | - | chr4.3:34253964-34253983 | None:intergenic | 20.0% |
| !! | CATATAAAAAGAATAAATGC+TGG | - | chr4.3:34253799-34253818 | None:intergenic | 20.0% |
| !! | TTTATATGTGAAACTCATTA+TGG | + | chr4.3:34253215-34253234 | MS.gene50742:intron | 20.0% |
| !!! | TAATTTCTTACTCTTTGTTT+GGG | - | chr4.3:34253938-34253957 | None:intergenic | 20.0% |
| ! | AAACAAAAGGCAGAAAATTA+CGG | - | chr4.3:34253598-34253617 | None:intergenic | 25.0% |
| ! | AATATTCAAAACGTTCAACT+TGG | - | chr4.3:34254349-34254368 | None:intergenic | 25.0% |
| ! | AGAAAACAATCAAAGCTTAA+TGG | - | chr4.3:34253864-34253883 | None:intergenic | 25.0% |
| ! | ATATTCAAAACGTTCAACTT+GGG | - | chr4.3:34254348-34254367 | None:intergenic | 25.0% |
| ! | CAATGCTATACAACTAATAT+TGG | - | chr4.3:34253275-34253294 | None:intergenic | 25.0% |
| ! | GTAATTTCTTACTCTTTGTT+TGG | - | chr4.3:34253939-34253958 | None:intergenic | 25.0% |
| !! | AATTTCTTACTCTTTGTTTG+GGG | - | chr4.3:34253937-34253956 | None:intergenic | 25.0% |
| !! | ATTTTCCCACAATTTATGAA+CGG | + | chr4.3:34254146-34254165 | MS.gene50742:intron | 25.0% |
| !!! | AACTTTTTCAAAGGTTTGTT+TGG | + | chr4.3:34254307-34254326 | MS.gene50742:intron | 25.0% |
| !!! | TTATATTTTAGAGTACACCA+GGG | + | chr4.3:34254120-34254139 | MS.gene50742:intron | 25.0% |
| AAAAACAGGACCAGATAATT+TGG | + | chr4.3:34254373-34254392 | MS.gene50742:intron | 30.0% | |
| AAAATGAACAGATTCAGCAT+AGG | - | chr4.3:34254082-34254101 | None:intergenic | 30.0% | |
| AAACACTCGAATATGCTTAA+GGG | - | chr4.3:34253412-34253431 | None:intergenic | 30.0% | |
| AACAAAAGGCAGAAAATTAC+GGG | - | chr4.3:34253597-34253616 | None:intergenic | 30.0% | |
| ! | ATATCTGTCGGTTGTTATTA+GGG | + | chr4.3:34253319-34253338 | MS.gene50742:intron | 30.0% |
| ! | ATCATTTTCTTCTTGTACAG+TGG | - | chr4.3:34254462-34254481 | None:intergenic | 30.0% |
| ! | TATATCTGTCGGTTGTTATT+AGG | + | chr4.3:34253318-34253337 | MS.gene50742:intron | 30.0% |
| ! | TCTGTTCATTTTGCAATATC+TGG | + | chr4.3:34254090-34254109 | MS.gene50742:intron | 30.0% |
| ! | TTTTCCCACAATTTATGAAC+GGG | + | chr4.3:34254147-34254166 | MS.gene50742:intron | 30.0% |
| !! | TTCAGGTTTTCCAAATTATC+TGG | - | chr4.3:34254386-34254405 | None:intergenic | 30.0% |
| !! | TTCTTTCTGAGGTAAACAAA+AGG | - | chr4.3:34253611-34253630 | None:intergenic | 30.0% |
| !!! | ATCATGTGCTCTTTGTTTTT+GGG | + | chr4.3:34254180-34254199 | MS.gene50742:intron | 30.0% |
| !!! | GTTATATTTTAGAGTACACC+AGG | + | chr4.3:34254119-34254138 | MS.gene50742:intron | 30.0% |
| !!! | TATCATGTGCTCTTTGTTTT+TGG | + | chr4.3:34254179-34254198 | MS.gene50742:intron | 30.0% |
| !!! | TGTGCTTTGAACTTTTTCAA+AGG | + | chr4.3:34254298-34254317 | MS.gene50742:intron | 30.0% |
| AACACTCGAATATGCTTAAG+GGG | - | chr4.3:34253411-34253430 | None:intergenic | 35.0% | |
| ATATTGACCTCCTCAATTTG+TGG | - | chr4.3:34253713-34253732 | None:intergenic | 35.0% | |
| ATTCACACCTATTCTCTTCA+GGG | - | chr4.3:34253684-34253703 | None:intergenic | 35.0% | |
| ATTGTTCAGCTATCTTCTTC+AGG | - | chr4.3:34254403-34254422 | None:intergenic | 35.0% | |
| CAACAACTACAGATGACAAA+AGG | + | chr4.3:34253648-34253667 | MS.gene50742:CDS | 35.0% | |
| CAAGAATTCATGTCAGCATA+TGG | - | chr4.3:34253359-34253378 | None:intergenic | 35.0% | |
| GAAACACTCGAATATGCTTA+AGG | - | chr4.3:34253413-34253432 | None:intergenic | 35.0% | |
| GTTCAAAGCACATACCTAAT+TGG | - | chr4.3:34254290-34254309 | None:intergenic | 35.0% | |
| TATTGACCTCCTCAATTTGT+GGG | - | chr4.3:34253712-34253731 | None:intergenic | 35.0% | |
| TCAGAGTAAAAGAAAGAACG+AGG | - | chr4.3:34253455-34253474 | None:intergenic | 35.0% | |
| TGAGGAGGTCAATATCTTTA+AGG | + | chr4.3:34253718-34253737 | MS.gene50742:CDS | 35.0% | |
| TGTTTACCTCAGAAAGAAGA+AGG | + | chr4.3:34253613-34253632 | MS.gene50742:intron | 35.0% | |
| ! | AGGAATTGTGAAGTTTTGCT+TGG | - | chr4.3:34253435-34253454 | None:intergenic | 35.0% |
| ! | CTAATTGGTGGATAATGCTA+GGG | - | chr4.3:34254275-34254294 | None:intergenic | 35.0% |
| ! | TATGGGCTGATATTACCTTT+GGG | - | chr4.3:34253770-34253789 | None:intergenic | 35.0% |
| ! | TTATGGGCTGATATTACCTT+TGG | - | chr4.3:34253771-34253790 | None:intergenic | 35.0% |
| !! | TCGTGAAAAGTTGATGAAGA+TGG | + | chr4.3:34253147-34253166 | MS.gene50742:CDS | 35.0% |
| AACCCATGTATTAGCAGCAA+TGG | - | chr4.3:34253902-34253921 | None:intergenic | 40.0% | |
| AATTGTGGGAAAATATGCCC+TGG | - | chr4.3:34254140-34254159 | None:intergenic | 40.0% | |
| ATCCAGTTCTTAAACCCCAA+AGG | + | chr4.3:34253752-34253771 | MS.gene50742:CDS | 40.0% | |
| CAAAGCACATACCTAATTGG+TGG | - | chr4.3:34254287-34254306 | None:intergenic | 40.0% | |
| CATCTGTAGTTGTTGTCTTG+TGG | - | chr4.3:34253643-34253662 | None:intergenic | 40.0% | |
| CATTCACACCTATTCTCTTC+AGG | - | chr4.3:34253685-34253704 | None:intergenic | 40.0% | |
| CCTAGCATTATCCACCAATT+AGG | + | chr4.3:34254273-34254292 | MS.gene50742:CDS | 40.0% | |
| CGAATATGCTTAAGGGGAAT+GGG | - | chr4.3:34253405-34253424 | None:intergenic | 40.0% | |
| CTAGCCCGTTCATAAATTGT+GGG | - | chr4.3:34254154-34254173 | None:intergenic | 40.0% | |
| GAATATGCTTAAGGGGAATG+GGG | - | chr4.3:34253404-34253423 | None:intergenic | 40.0% | |
| GTCCATTGCTGCTAATACAT+GGG | + | chr4.3:34253897-34253916 | MS.gene50742:CDS | 40.0% | |
| TCAAAACGTTCAACTTGGGT+AGG | - | chr4.3:34254344-34254363 | None:intergenic | 40.0% | |
| TCGAATATGCTTAAGGGGAA+TGG | - | chr4.3:34253406-34253425 | None:intergenic | 40.0% | |
| TCTAGCCCGTTCATAAATTG+TGG | - | chr4.3:34254155-34254174 | None:intergenic | 40.0% | |
| TGTAGTTGTTGTCTTGTGGA+CGG | - | chr4.3:34253639-34253658 | None:intergenic | 40.0% | |
| TTTCACTTCTACAGAGTTGC+AGG | + | chr4.3:34254242-34254261 | MS.gene50742:intron | 40.0% | |
| ! | ATGGGCTGATATTACCTTTG+GGG | - | chr4.3:34253769-34253788 | None:intergenic | 40.0% |
| ! | CCTAATTGGTGGATAATGCT+AGG | - | chr4.3:34254276-34254295 | None:intergenic | 40.0% |
| ! | GCTAATACATGGGTTGTTAG+TGG | + | chr4.3:34253907-34253926 | MS.gene50742:CDS | 40.0% |
| !! | GAAAAGTTGATGAAGATGGC+CGG | + | chr4.3:34253151-34253170 | MS.gene50742:CDS | 40.0% |
| !! | TACCTTTGGGGTTTAAGAAC+TGG | - | chr4.3:34253757-34253776 | None:intergenic | 40.0% |
| AGCTGAACAATTCCAGAAGC+AGG | + | chr4.3:34254412-34254431 | MS.gene50742:CDS | 45.0% | |
| CGTCCATTGCTGCTAATACA+TGG | + | chr4.3:34253896-34253915 | MS.gene50742:CDS | 45.0% | |
| CTGTCTCAAAAGTCTCTCCT+GGG | - | chr4.3:34254505-34254524 | None:intergenic | 45.0% | |
| GAATGCCATCCCACAAATTG+AGG | + | chr4.3:34253700-34253719 | MS.gene50742:CDS | 45.0% | |
| TCTGTTCGAACTGGAGGAAA+GGG | + | chr4.3:34253175-34253194 | MS.gene50742:CDS | 45.0% | |
| TTACGGGACAACTCAACTCT+TGG | - | chr4.3:34253581-34253600 | None:intergenic | 45.0% | |
| TTCTGTTCGAACTGGAGGAA+AGG | + | chr4.3:34253174-34253193 | MS.gene50742:CDS | 45.0% | |
| GACCTCCTCAATTTGTGGGA+TGG | - | chr4.3:34253708-34253727 | None:intergenic | 50.0% | |
| GCTGTCTCAAAAGTCTCTCC+TGG | - | chr4.3:34254506-34254525 | None:intergenic | 50.0% | |
| TCCTCCAGTTCGAACAGAAC+CGG | - | chr4.3:34253173-34253192 | None:intergenic | 50.0% | |
| TGCCATCCCACAAATTGAGG+AGG | + | chr4.3:34253703-34253722 | MS.gene50742:CDS | 50.0% | |
| ! | CAGAGCACCCTGAAGAGAAT+AGG | + | chr4.3:34253674-34253693 | MS.gene50742:CDS | 50.0% |
| !! | GAGGAAAGGGTACTGTCAGA+AGG | + | chr4.3:34253188-34253207 | MS.gene50742:CDS | 50.0% |
| !!! | GACTTTTGAGACAGCTGCTG+AGG | + | chr4.3:34254511-34254530 | MS.gene50742:CDS | 50.0% |
| !!! | TTTTGAGACAGCTGCTGAGG+AGG | + | chr4.3:34254514-34254533 | MS.gene50742:CDS | 50.0% |
| GCAGCAATGGACGCTTGAAC+TGG | - | chr4.3:34253889-34253908 | None:intergenic | 55.0% | |
| GGACGGCCTTCTTCTTTCTG+AGG | - | chr4.3:34253622-34253641 | None:intergenic | 55.0% | |
| TCTCTCCTGGGACAAGCTCT+GGG | - | chr4.3:34254493-34254512 | None:intergenic | 55.0% | |
| ! | ATGGCCGGTTCTGTTCGAAC+TGG | + | chr4.3:34253166-34253185 | MS.gene50742:CDS | 55.0% |
| CAGAAGCAGGCTCCTGAAGC+AGG | + | chr4.3:34254425-34254444 | MS.gene50742:CDS | 60.0% | |
| CTGCTTCAGGAGCCTGCTTC+TGG | - | chr4.3:34254427-34254446 | None:intergenic | 60.0% | |
| GATGTCCCAGAGCTTGTCCC+AGG | + | chr4.3:34254485-34254504 | MS.gene50742:CDS | 60.0% | |
| GCTGAACCAGCACCTGCTTC+AGG | - | chr4.3:34254440-34254459 | None:intergenic | 60.0% | |
| GTCTCTCCTGGGACAAGCTC+TGG | - | chr4.3:34254494-34254513 | None:intergenic | 60.0% | |
| ! | GCCGGTTCTGTTCGAACTGG+AGG | + | chr4.3:34253169-34253188 | MS.gene50742:CDS | 60.0% |
| CAGGCTCCTGAAGCAGGTGC+TGG | + | chr4.3:34254431-34254450 | MS.gene50742:CDS | 65.0% | |
| GACAGCTGCTGAGGAGGCCA+AGG | + | chr4.3:34254520-34254539 | MS.gene50742:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 34253142 | 34254550 | 34253142 | ID=MS.gene50742 |
| chr4.3 | mRNA | 34253142 | 34254550 | 34253142 | ID=MS.gene50742.t1;Parent=MS.gene50742 |
| chr4.3 | exon | 34253142 | 34253209 | 34253142 | ID=MS.gene50742.t1.exon1;Parent=MS.gene50742.t1 |
| chr4.3 | CDS | 34253142 | 34253209 | 34253142 | ID=cds.MS.gene50742.t1;Parent=MS.gene50742.t1 |
| chr4.3 | exon | 34253625 | 34253773 | 34253625 | ID=MS.gene50742.t1.exon2;Parent=MS.gene50742.t1 |
| chr4.3 | CDS | 34253625 | 34253773 | 34253625 | ID=cds.MS.gene50742.t1;Parent=MS.gene50742.t1 |
| chr4.3 | exon | 34253890 | 34253946 | 34253890 | ID=MS.gene50742.t1.exon3;Parent=MS.gene50742.t1 |
| chr4.3 | CDS | 34253890 | 34253946 | 34253890 | ID=cds.MS.gene50742.t1;Parent=MS.gene50742.t1 |
| chr4.3 | exon | 34254256 | 34254294 | 34254256 | ID=MS.gene50742.t1.exon4;Parent=MS.gene50742.t1 |
| chr4.3 | CDS | 34254256 | 34254294 | 34254256 | ID=cds.MS.gene50742.t1;Parent=MS.gene50742.t1 |
| chr4.3 | exon | 34254381 | 34254550 | 34254381 | ID=MS.gene50742.t1.exon5;Parent=MS.gene50742.t1 |
| chr4.3 | CDS | 34254381 | 34254550 | 34254381 | ID=cds.MS.gene50742.t1;Parent=MS.gene50742.t1 |
| Gene Sequence |
| Protein sequence |
