Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41902.t1 | XP_003624883.1 | 100 | 203 | 0 | 0 | 1 | 203 | 1 | 203 | 2.70E-73 | 285 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41902.t1 | Q9M612 | 81.4 | 199 | 30 | 3 | 6 | 202 | 11 | 204 | 6.5e-52 | 205.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41902.t1 | G7L4T7 | 100.0 | 203 | 0 | 0 | 1 | 203 | 1 | 203 | 1.9e-73 | 285.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050290 | MS.gene41902 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene050320 | MS.gene41902 | 0.816706 | 4.82E-52 | -1.69E-46 |
| MS.gene050752 | MS.gene41902 | 0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene41902 | 0.824346 | 8.48E-54 | -1.69E-46 |
| MS.gene051330 | MS.gene41902 | 0.809847 | 1.55E-50 | -1.69E-46 |
| MS.gene051746 | MS.gene41902 | 0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene41902 | 0.836322 | 1.00E-56 | -1.69E-46 |
| MS.gene051903 | MS.gene41902 | 0.871906 | 4.78E-67 | -1.69E-46 |
| MS.gene051975 | MS.gene41902 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene41902 | 0.838395 | 2.95E-57 | -1.69E-46 |
| MS.gene053109 | MS.gene41902 | 0.81692 | 4.31E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene41902 | 0.885733 | 6.30E-72 | -1.69E-46 |
| MS.gene054403 | MS.gene41902 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene054937 | MS.gene41902 | 0.851859 | 6.74E-61 | -1.69E-46 |
| MS.gene056075 | MS.gene41902 | 0.826055 | 3.35E-54 | -1.69E-46 |
| MS.gene056631 | MS.gene41902 | 0.823551 | 1.30E-53 | -1.69E-46 |
| MS.gene056896 | MS.gene41902 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene057052 | MS.gene41902 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene41902 | 0.88513 | 1.06E-71 | -1.69E-46 |
| MS.gene057705 | MS.gene41902 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene058364 | MS.gene41902 | 0.861323 | 1.11E-63 | -1.69E-46 |
| MS.gene06001 | MS.gene41902 | 0.854713 | 1.02E-61 | -1.69E-46 |
| MS.gene06011 | MS.gene41902 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene061145 | MS.gene41902 | 0.808751 | 2.65E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044693 | MS.gene41902 | PPI |
| MS.gene50742 | MS.gene41902 | PPI |
| MS.gene73089 | MS.gene41902 | PPI |
| MS.gene039827 | MS.gene41902 | PPI |
| MS.gene003688 | MS.gene41902 | PPI |
| MS.gene23317 | MS.gene41902 | PPI |
| MS.gene003685 | MS.gene41902 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41902.t1 | MTR_7g088680 | 100.000 | 203 | 0 | 0 | 1 | 203 | 1 | 203 | 1.72e-146 | 405 |
| MS.gene41902.t1 | MTR_3g092970 | 72.185 | 151 | 36 | 2 | 59 | 203 | 77 | 227 | 1.54e-67 | 206 |
| MS.gene41902.t1 | MTR_3g092980 | 69.333 | 150 | 41 | 2 | 59 | 203 | 69 | 218 | 8.66e-59 | 184 |
| MS.gene41902.t1 | MTR_3g092980 | 69.333 | 150 | 41 | 2 | 59 | 203 | 71 | 220 | 1.02e-58 | 184 |
| MS.gene41902.t1 | MTR_3g093750 | 56.303 | 119 | 41 | 3 | 87 | 203 | 418 | 527 | 1.26e-29 | 114 |
| MS.gene41902.t1 | MTR_1g006975 | 88.636 | 44 | 5 | 0 | 51 | 94 | 1898 | 1941 | 1.15e-16 | 78.2 |
| MS.gene41902.t1 | MTR_3g093720 | 78.571 | 42 | 9 | 0 | 161 | 202 | 215 | 256 | 5.37e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41902.t1 | AT3G12390 | 72.500 | 200 | 52 | 2 | 6 | 203 | 5 | 203 | 1.98e-77 | 231 |
| MS.gene41902.t1 | AT5G13850 | 70.000 | 210 | 50 | 3 | 1 | 203 | 1 | 204 | 1.07e-75 | 226 |
| MS.gene41902.t1 | AT3G49470 | 62.000 | 200 | 64 | 4 | 10 | 203 | 24 | 217 | 2.44e-67 | 206 |
| MS.gene41902.t1 | AT3G49470 | 61.622 | 185 | 60 | 3 | 16 | 194 | 29 | 208 | 1.31e-61 | 192 |
| MS.gene41902.t1 | AT4G10480 | 61.951 | 205 | 65 | 3 | 6 | 202 | 11 | 210 | 3.67e-61 | 190 |
| MS.gene41902.t1 | AT4G10480 | 69.737 | 152 | 36 | 2 | 59 | 202 | 62 | 211 | 6.97e-61 | 189 |
| MS.gene41902.t1 | AT1G33040 | 64.238 | 151 | 48 | 2 | 59 | 203 | 59 | 209 | 6.37e-59 | 184 |
Find 45 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGCTCTTCTTGGGTT+TGG | 0.250426 | 7.4:+19816030 | None:intergenic |
| TCTGACACCTACATTATATT+CGG | 0.304764 | 7.4:-19814410 | MS.gene41902:CDS |
| TCGTCTACATCCTCATCTTC+TGG | 0.324398 | 7.4:+19814275 | None:intergenic |
| GCACCCGCATTGGTCAAATT+AGG | 0.324435 | 7.4:+19814323 | None:intergenic |
| GAGCAGCAAGAAGCTCTTCT+TGG | 0.330866 | 7.4:+19816024 | None:intergenic |
| AAGAAGCTCTTCTTGGGTTT+GGG | 0.331123 | 7.4:+19816031 | None:intergenic |
| GGAGCAATACCAGAGGATTC+TGG | 0.349709 | 7.4:+19814296 | None:intergenic |
| GCTTTAACAGCTCTTGATCT+TGG | 0.356165 | 7.4:+19814200 | None:intergenic |
| AGACATTGTTGCTGCCATTA+TGG | 0.359211 | 7.4:-19814159 | MS.gene41902:CDS |
| CTTGGAATGAAAGCTGTTAC+TGG | 0.368859 | 7.4:-19814610 | MS.gene41902:CDS |
| GTTGGACTCTTGAAAACATC+TGG | 0.370830 | 7.4:+19814434 | None:intergenic |
| TTCTTGGGTTTGGGCAGTCA+TGG | 0.386669 | 7.4:+19816040 | None:intergenic |
| CGCAAGGCAATGCTTAAACT+TGG | 0.418058 | 7.4:-19814628 | MS.gene41902:CDS |
| CTGACACCTACATTATATTC+GGG | 0.423367 | 7.4:-19814409 | MS.gene41902:CDS |
| TTAATTTGTTAGCTCCATAA+TGG | 0.425574 | 7.4:+19814145 | None:intergenic |
| CACCACCAACTCAATATCCT+TGG | 0.437037 | 7.4:+19814238 | None:intergenic |
| AGCAGCAAGAAGCTCTTCTT+GGG | 0.446621 | 7.4:+19816025 | None:intergenic |
| TTCTGGTTTCGCACCCGCAT+TGG | 0.470492 | 7.4:+19814313 | None:intergenic |
| TCAGGCTGCAGAGCAGTTCA+AGG | 0.470685 | 7.4:-19814348 | MS.gene41902:CDS |
| TCCCAAGGATATTGAGTTGG+TGG | 0.515624 | 7.4:-19814240 | MS.gene41902:CDS |
| GCTCCTAATTTGACCAATGC+GGG | 0.519514 | 7.4:-19814326 | MS.gene41902:CDS |
| ATAATGTAGGTGTCAGAAGT+TGG | 0.520697 | 7.4:+19814416 | None:intergenic |
| TCATCGTCATCCTCAACTAC+AGG | 0.523575 | 7.4:+19815408 | None:intergenic |
| ACCACCAACTCAATATCCTT+GGG | 0.531886 | 7.4:+19814239 | None:intergenic |
| GATGAGGATGTAGACGAGAC+TGG | 0.538671 | 7.4:-19814269 | MS.gene41902:CDS |
| GGATTTGAAGGTGATGCATC+TGG | 0.544074 | 7.4:-19814685 | MS.gene41902:CDS |
| GGCAGCAACAATGTCTCCAT+TGG | 0.548006 | 7.4:+19814166 | None:intergenic |
| GAGTTGGTGGTGACTCAAGC+TGG | 0.556994 | 7.4:-19814227 | MS.gene41902:CDS |
| GGTGCGAAACCAGAATCCTC+TGG | 0.566739 | 7.4:-19814305 | MS.gene41902:CDS |
| TGACGAAGACGACGATGATG+AGG | 0.584480 | 7.4:-19815370 | MS.gene41902:CDS |
| GCATGATGAGCCTGTAGTTG+AGG | 0.588135 | 7.4:-19815418 | MS.gene41902:CDS |
| AAAGCTCTCAAAGCTGCCAA+TGG | 0.592851 | 7.4:-19814182 | MS.gene41902:CDS |
| GAGCTCACAGCTACAAACTC+AGG | 0.597975 | 7.4:-19814366 | MS.gene41902:CDS |
| CGAGACTGGTGTAGATCCCA+AGG | 0.607645 | 7.4:-19814255 | MS.gene41902:CDS |
| TGGTATTGCTCCAGAAGATG+AGG | 0.607813 | 7.4:-19814285 | MS.gene41902:CDS |
| AGCTTCCCCGAATATAATGT+AGG | 0.614771 | 7.4:+19814403 | None:intergenic |
| AGATCCCAAGGATATTGAGT+TGG | 0.629225 | 7.4:-19814243 | MS.gene41902:CDS |
| TTGAAGGTGATGCATCTGGT+AGG | 0.643359 | 7.4:-19814681 | MS.gene41902:CDS |
| GGCTCCTAATTTGACCAATG+CGG | 0.643666 | 7.4:-19814327 | MS.gene41902:CDS |
| AAGTGAAAAGAAGAGTCGCA+AGG | 0.645070 | 7.4:-19814644 | MS.gene41902:CDS |
| ATCTTCTGGAGCAATACCAG+AGG | 0.670950 | 7.4:+19814289 | None:intergenic |
| TGACACCTACATTATATTCG+GGG | 0.682224 | 7.4:-19814408 | MS.gene41902:CDS |
| TGACGATGATGAGGACGATG+AGG | 0.719627 | 7.4:-19815394 | MS.gene41902:CDS |
| AGTTGAGGATGACGATGATG+AGG | 0.722265 | 7.4:-19815403 | MS.gene41902:CDS |
| GAGGACGATGACAATGCTGA+AGG | 0.723088 | 7.4:-19815351 | MS.gene41902:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAATAAATTGG+AGG | + | chr7.4:19814230-19814249 | None:intergenic | 10.0% |
| !! | TGTTACAATGAAAAAAAAAA+TGG | - | chr7.4:19814497-19814516 | MS.gene41902:intron | 15.0% |
| !!! | TTTATGTATGAAATGTTTTA+GGG | - | chr7.4:19814324-19814343 | MS.gene41902:CDS | 15.0% |
| !!! | TTTTTTTTTAGTTCAGTTTT+TGG | - | chr7.4:19814242-19814261 | MS.gene41902:CDS | 15.0% |
| !! | TGTTCTACAAAATTTCAAAT+GGG | - | chr7.4:19815011-19815030 | MS.gene41902:intron | 20.0% |
| !! | TTCATTTAAAAGTTCATCAT+TGG | - | chr7.4:19815100-19815119 | MS.gene41902:intron | 20.0% |
| !! | TTCTTGTAGTAAATTGTAAT+TGG | - | chr7.4:19814587-19814606 | MS.gene41902:CDS | 20.0% |
| !! | TTGTTCTACAAAATTTCAAA+TGG | - | chr7.4:19815010-19815029 | MS.gene41902:intron | 20.0% |
| !!! | ATTTACATGTTTTTGAAATC+AGG | - | chr7.4:19814408-19814427 | MS.gene41902:CDS | 20.0% |
| !!! | CTTTATGTATGAAATGTTTT+AGG | - | chr7.4:19814323-19814342 | MS.gene41902:CDS | 20.0% |
| !!! | GGTTTTATGAATAAATTGAA+AGG | - | chr7.4:19814458-19814477 | MS.gene41902:CDS | 20.0% |
| !!! | TTTACATGTTTTTGAAATCA+GGG | - | chr7.4:19814409-19814428 | MS.gene41902:CDS | 20.0% |
| !!! | TTTTTCTGTTGTATCAATAT+TGG | - | chr7.4:19815663-19815682 | MS.gene41902:intron | 20.0% |
| !!! | TTTTTTTCTTTTTCTATTGC+AGG | - | chr7.4:19815477-19815496 | MS.gene41902:intron | 20.0% |
| ! | ACTGTGTATGAAATGATTTA+GGG | - | chr7.4:19814357-19814376 | MS.gene41902:CDS | 25.0% |
| ! | ATAGCATTCATTGAGTAATT+TGG | - | chr7.4:19814928-19814947 | MS.gene41902:intron | 25.0% |
| ! | CAAAAACTAAACCAATTACT+TGG | + | chr7.4:19814286-19814305 | None:intergenic | 25.0% |
| ! | CAACAAAGTGAATTAATGTA+CGG | - | chr7.4:19814963-19814982 | MS.gene41902:intron | 25.0% |
| ! | TACTGTGTATGAAATGATTT+AGG | - | chr7.4:19814356-19814375 | MS.gene41902:CDS | 25.0% |
| ! | TTATTCATAAAACCATGACA+TGG | + | chr7.4:19814452-19814471 | None:intergenic | 25.0% |
| ! | TTGTAAACTTATAAGTGTAG+TGG | - | chr7.4:19814679-19814698 | MS.gene41902:CDS | 25.0% |
| ! | TTGTATTTAGTGTATGTTGA+GGG | - | chr7.4:19815241-19815260 | MS.gene41902:intron | 25.0% |
| ! | TTTGTATTTAGTGTATGTTG+AGG | - | chr7.4:19815240-19815259 | MS.gene41902:intron | 25.0% |
| !! | TACAGATGAATTTGTTCTTA+TGG | - | chr7.4:19814642-19814661 | MS.gene41902:CDS | 25.0% |
| !! | TAGTTTGATTTCCAAGTAAT+TGG | - | chr7.4:19814272-19814291 | MS.gene41902:CDS | 25.0% |
| !!! | GGTTTAGTTTTTGATGTTTT+TGG | - | chr7.4:19814293-19814312 | MS.gene41902:CDS | 25.0% |
| !!! | TTAATTTGTTAGCTCCATAA+TGG | + | chr7.4:19816041-19816060 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTGCATGAACTA+AGG | - | chr7.4:19815431-19815450 | MS.gene41902:intron | 25.0% |
| ACTGTCATAAATATTGTGTG+TGG | - | chr7.4:19815315-19815334 | MS.gene41902:intron | 30.0% | |
| ATGTATCTGTGTATCTATAG+AGG | - | chr7.4:19814551-19814570 | MS.gene41902:intron | 30.0% | |
| CAAAATACATGTACAATGTC+AGG | - | chr7.4:19815375-19815394 | MS.gene41902:CDS | 30.0% | |
| CATTCATTGAGTAATTTGGT+AGG | - | chr7.4:19814932-19814951 | MS.gene41902:intron | 30.0% | |
| TCTGACACCTACATTATATT+CGG | - | chr7.4:19815773-19815792 | MS.gene41902:intron | 30.0% | |
| TTGAGGGTTTAACAAAATCA+CGG | - | chr7.4:19815257-19815276 | MS.gene41902:intron | 30.0% | |
| ! | CTGACATTGTACATGTATTT+TGG | + | chr7.4:19815377-19815396 | None:intergenic | 30.0% |
| ! | TTTTCTATTGCAGGATTTGA+AGG | - | chr7.4:19815486-19815505 | MS.gene41902:intron | 30.0% |
| !!! | CATGTATTTTGGTTGTATTC+TGG | + | chr7.4:19815366-19815385 | None:intergenic | 30.0% |
| !!! | GTTTTTGAAATCAGGGTTTT+TGG | - | chr7.4:19814416-19814435 | MS.gene41902:CDS | 30.0% |
| ATAATGTAGGTGTCAGAAGT+TGG | + | chr7.4:19815770-19815789 | None:intergenic | 35.0% | |
| ATGAACTAAGGCTACAATGA+TGG | - | chr7.4:19815443-19815462 | MS.gene41902:intron | 35.0% | |
| CTGACACCTACATTATATTC+GGG | - | chr7.4:19815774-19815793 | MS.gene41902:intron | 35.0% | |
| TATTCTGGTACAGACTAATC+TGG | + | chr7.4:19815351-19815370 | None:intergenic | 35.0% | |
| TGACACCTACATTATATTCG+GGG | - | chr7.4:19815775-19815794 | MS.gene41902:intron | 35.0% | |
| TGAGGGTTTAACAAAATCAC+GGG | - | chr7.4:19815258-19815277 | MS.gene41902:intron | 35.0% | |
| ! | AACTTGCCTCATTTTGCATT+TGG | - | chr7.4:19814892-19814911 | MS.gene41902:intron | 35.0% |
| AAGAAGCTCTTCTTGGGTTT+GGG | + | chr7.4:19814155-19814174 | None:intergenic | 40.0% | |
| AAGTGAAAAGAAGAGTCGCA+AGG | - | chr7.4:19815539-19815558 | MS.gene41902:intron | 40.0% | |
| ACCACCAACTCAATATCCTT+GGG | + | chr7.4:19815947-19815966 | None:intergenic | 40.0% | |
| ACGAACAAGATCTGATGAAC+AGG | + | chr7.4:19815719-19815738 | None:intergenic | 40.0% | |
| AGACATTGTTGCTGCCATTA+TGG | - | chr7.4:19816024-19816043 | MS.gene41902:CDS | 40.0% | |
| AGATCCCAAGGATATTGAGT+TGG | - | chr7.4:19815940-19815959 | MS.gene41902:intron | 40.0% | |
| AGCTTCCCCGAATATAATGT+AGG | + | chr7.4:19815783-19815802 | None:intergenic | 40.0% | |
| CCTTCACCAAATGCAAAATG+AGG | + | chr7.4:19814901-19814920 | None:intergenic | 40.0% | |
| CTTGGAATGAAAGCTGTTAC+TGG | - | chr7.4:19815573-19815592 | MS.gene41902:intron | 40.0% | |
| GCTTTAACAGCTCTTGATCT+TGG | + | chr7.4:19815986-19816005 | None:intergenic | 40.0% | |
| GGATTTGAATGACCATGTCA+TGG | - | chr7.4:19814437-19814456 | MS.gene41902:CDS | 40.0% | |
| GTTGGACTCTTGAAAACATC+TGG | + | chr7.4:19815752-19815771 | None:intergenic | 40.0% | |
| TCAAATGGGTGTTTCATCTG+AGG | - | chr7.4:19815025-19815044 | MS.gene41902:intron | 40.0% | |
| TTGAAAGTCATGCAGAACAG+TGG | + | chr7.4:19815403-19815422 | None:intergenic | 40.0% | |
| ! | CTTTTCACTTCTGGTCTGTT+TGG | + | chr7.4:19815529-19815548 | None:intergenic | 40.0% |
| !! | CCTCATTTTGCATTTGGTGA+AGG | - | chr7.4:19814898-19814917 | MS.gene41902:intron | 40.0% |
| AAACCCACTGCGACAAATTG+TGG | - | chr7.4:19815291-19815310 | MS.gene41902:intron | 45.0% | |
| AAAGCTCTCAAAGCTGCCAA+TGG | - | chr7.4:19816001-19816020 | MS.gene41902:CDS | 45.0% | |
| AGCAGCAAGAAGCTCTTCTT+GGG | + | chr7.4:19814161-19814180 | None:intergenic | 45.0% | |
| AGTACCACAATTTGTCGCAG+TGG | + | chr7.4:19815298-19815317 | None:intergenic | 45.0% | |
| AGTTGAGGATGACGATGATG+AGG | - | chr7.4:19814780-19814799 | MS.gene41902:intron | 45.0% | |
| CAAGAAGCTCTTCTTGGGTT+TGG | + | chr7.4:19814156-19814175 | None:intergenic | 45.0% | |
| CACCACCAACTCAATATCCT+TGG | + | chr7.4:19815948-19815967 | None:intergenic | 45.0% | |
| CGCAAGGCAATGCTTAAACT+TGG | - | chr7.4:19815555-19815574 | MS.gene41902:intron | 45.0% | |
| GCTCCTAATTTGACCAATGC+GGG | - | chr7.4:19815857-19815876 | MS.gene41902:intron | 45.0% | |
| GGATTTGAAGGTGATGCATC+TGG | - | chr7.4:19815498-19815517 | MS.gene41902:intron | 45.0% | |
| GGCTCCTAATTTGACCAATG+CGG | - | chr7.4:19815856-19815875 | MS.gene41902:intron | 45.0% | |
| GTACCACAATTTGTCGCAGT+GGG | + | chr7.4:19815297-19815316 | None:intergenic | 45.0% | |
| TCATCGTCATCCTCAACTAC+AGG | + | chr7.4:19814778-19814797 | None:intergenic | 45.0% | |
| TCGTCTACATCCTCATCTTC+TGG | + | chr7.4:19815911-19815930 | None:intergenic | 45.0% | |
| TGGTATTGCTCCAGAAGATG+AGG | - | chr7.4:19815898-19815917 | MS.gene41902:intron | 45.0% | |
| TTGAAGGTGATGCATCTGGT+AGG | - | chr7.4:19815502-19815521 | MS.gene41902:intron | 45.0% | |
| ! | GCGACTCTTCTTTTCACTTC+TGG | + | chr7.4:19815538-19815557 | None:intergenic | 45.0% |
| !! | ATCTTCTGGAGCAATACCAG+AGG | + | chr7.4:19815897-19815916 | None:intergenic | 45.0% |
| !! | TCCCAAGGATATTGAGTTGG+TGG | - | chr7.4:19815943-19815962 | MS.gene41902:intron | 45.0% |
| !! | CTAAAAAAAAAATAATAAAT+TGG | + | chr7.4:19814233-19814252 | None:intergenic | 5.0% |
| GAGCAGCAAGAAGCTCTTCT+TGG | + | chr7.4:19814162-19814181 | None:intergenic | 50.0% | |
| GAGCTCACAGCTACAAACTC+AGG | - | chr7.4:19815817-19815836 | MS.gene41902:intron | 50.0% | |
| GAGGACGATGACAATGCTGA+AGG | - | chr7.4:19814832-19814851 | MS.gene41902:intron | 50.0% | |
| GATGAGGATGTAGACGAGAC+TGG | - | chr7.4:19815914-19815933 | MS.gene41902:intron | 50.0% | |
| GCATGATGAGCCTGTAGTTG+AGG | - | chr7.4:19814765-19814784 | MS.gene41902:intron | 50.0% | |
| GGAGCAATACCAGAGGATTC+TGG | + | chr7.4:19815890-19815909 | None:intergenic | 50.0% | |
| GGCAGCAACAATGTCTCCAT+TGG | + | chr7.4:19816020-19816039 | None:intergenic | 50.0% | |
| TGACGAAGACGACGATGATG+AGG | - | chr7.4:19814813-19814832 | MS.gene41902:intron | 50.0% | |
| TGACGATGATGAGGACGATG+AGG | - | chr7.4:19814789-19814808 | MS.gene41902:intron | 50.0% | |
| ! | GCACCCGCATTGGTCAAATT+AGG | + | chr7.4:19815863-19815882 | None:intergenic | 50.0% |
| CGAGACTGGTGTAGATCCCA+AGG | - | chr7.4:19815928-19815947 | MS.gene41902:intron | 55.0% | |
| GGTGCGAAACCAGAATCCTC+TGG | - | chr7.4:19815878-19815897 | MS.gene41902:intron | 55.0% | |
| TCAGGCTGCAGAGCAGTTCA+AGG | - | chr7.4:19815835-19815854 | MS.gene41902:intron | 55.0% | |
| !! | GAGTTGGTGGTGACTCAAGC+TGG | - | chr7.4:19815956-19815975 | MS.gene41902:intron | 55.0% |
| !! | TTCTGGTTTCGCACCCGCAT+TGG | + | chr7.4:19815873-19815892 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 19814145 | 19816060 | 19814145 | ID=MS.gene41902 |
| chr7.4 | mRNA | 19814145 | 19816060 | 19814145 | ID=MS.gene41902.t1;Parent=MS.gene41902 |
| chr7.4 | exon | 19816001 | 19816060 | 19816001 | ID=MS.gene41902.t1.exon1;Parent=MS.gene41902.t1 |
| chr7.4 | CDS | 19816001 | 19816060 | 19816001 | ID=cds.MS.gene41902.t1;Parent=MS.gene41902.t1 |
| chr7.4 | exon | 19815352 | 19815439 | 19815352 | ID=MS.gene41902.t1.exon2;Parent=MS.gene41902.t1 |
| chr7.4 | CDS | 19815352 | 19815439 | 19815352 | ID=cds.MS.gene41902.t1;Parent=MS.gene41902.t1 |
| chr7.4 | exon | 19814576 | 19814706 | 19814576 | ID=MS.gene41902.t1.exon3;Parent=MS.gene41902.t1 |
| chr7.4 | CDS | 19814576 | 19814706 | 19814576 | ID=cds.MS.gene41902.t1;Parent=MS.gene41902.t1 |
| chr7.4 | exon | 19814145 | 19814477 | 19814145 | ID=MS.gene41902.t1.exon4;Parent=MS.gene41902.t1 |
| chr7.4 | CDS | 19814145 | 19814477 | 19814145 | ID=cds.MS.gene41902.t1;Parent=MS.gene41902.t1 |
| Gene Sequence |
| Protein sequence |
