Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003688.t1 | XP_003606991.2 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 3.70E-70 | 274.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003688.t1 | Q9SMW7 | 77.7 | 157 | 33 | 2 | 1 | 156 | 1 | 156 | 5.3e-57 | 221.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003688.t1 | B7FMW7 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 2.7e-70 | 274.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41901 | MS.gene003688 | PPI |
| MS.gene068093 | MS.gene003688 | PPI |
| MS.gene003688 | MS.gene50742 | PPI |
| MS.gene73089 | MS.gene003688 | PPI |
| MS.gene044693 | MS.gene003688 | PPI |
| MS.gene003688 | MS.gene41902 | PPI |
| MS.gene003688 | MS.gene039827 | PPI |
| MS.gene003688 | MS.gene42247 | PPI |
| MS.gene23317 | MS.gene003688 | PPI |
| MS.gene003688 | MS.gene013940 | PPI |
| MS.gene003685 | MS.gene003688 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003688.t1 | MTR_4g071000 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 9.36e-115 | 322 |
| MS.gene003688.t1 | MTR_3g020660 | 89.241 | 158 | 17 | 0 | 1 | 158 | 1 | 158 | 1.39e-101 | 288 |
| MS.gene003688.t1 | MTR_3g020520 | 82.787 | 122 | 21 | 0 | 37 | 158 | 404 | 525 | 9.39e-66 | 209 |
| MS.gene003688.t1 | MTR_3g020640 | 72.593 | 135 | 30 | 1 | 24 | 158 | 1003 | 1130 | 1.35e-58 | 196 |
| MS.gene003688.t1 | MTR_3g020650 | 76.471 | 85 | 20 | 0 | 38 | 122 | 1028 | 1112 | 2.40e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003688.t1 | AT1G17880 | 86.755 | 151 | 18 | 2 | 1 | 150 | 1 | 150 | 1.15e-91 | 263 |
| MS.gene003688.t1 | AT1G73230 | 85.987 | 157 | 21 | 1 | 1 | 156 | 1 | 157 | 6.41e-87 | 251 |
Find 52 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTCAGGAGCCTGCTTC+TGG | 0.192683 | 4.1:-32014662 | None:intergenic |
| TGAGGAGGTCAATATCTTTA+AGG | 0.219626 | 4.1:+32013956 | MS.gene003688:CDS |
| TAATTTCTTACTCTTTGTTT+GGG | 0.224790 | 4.1:-32014173 | None:intergenic |
| GTAATTTCTTACTCTTTGTT+TGG | 0.245420 | 4.1:-32014174 | None:intergenic |
| CATTCACACCTATTCTCTTC+AGG | 0.292092 | 4.1:-32013920 | None:intergenic |
| ATTGTTCAGCTATCTTCTTC+AGG | 0.297553 | 4.1:-32014638 | None:intergenic |
| TTTCACTTCTACAGAGTTGC+AGG | 0.308571 | 4.1:+32014480 | MS.gene003688:intron |
| GTTCAAAGCACATACCTAAT+TGG | 0.327309 | 4.1:-32014525 | None:intergenic |
| GCTGAACCAGCACCTGCTTC+AGG | 0.334925 | 4.1:-32014675 | None:intergenic |
| GTCTCTCCTGGGACAAGCTC+TGG | 0.335105 | 4.1:-32014729 | None:intergenic |
| CCTAGCATTATCCACCAATT+AGG | 0.352096 | 4.1:+32014511 | MS.gene003688:CDS |
| TACCTTTGGGGTTTAAGAAC+TGG | 0.359158 | 4.1:-32013992 | None:intergenic |
| CGTCCATTGCTGCTAATACA+TGG | 0.419485 | 4.1:+32014134 | MS.gene003688:CDS |
| GCAGTCTCAAAAGTCTCTCC+TGG | 0.431286 | 4.1:-32014741 | None:intergenic |
| ATTCACACCTATTCTCTTCA+GGG | 0.451011 | 4.1:-32013919 | None:intergenic |
| TATTGACCTCCTCAATTTGT+GGG | 0.452604 | 4.1:-32013947 | None:intergenic |
| ATGGGCTGATATTACCTTTG+GGG | 0.456873 | 4.1:-32014004 | None:intergenic |
| CAGAAGCAGGCTCCTGAAGC+AGG | 0.458056 | 4.1:+32014663 | MS.gene003688:CDS |
| TCCTCCGGTTCGAACAGAAC+CGG | 0.461978 | 4.1:-32013409 | None:intergenic |
| CAGAGCACCCTGAAGAGAAT+AGG | 0.468639 | 4.1:+32013912 | MS.gene003688:CDS |
| ATAACAAATCTAACTATCCT+TGG | 0.472981 | 4.1:-32014775 | None:intergenic |
| TGTTTACCTCAGAAAGAAGA+AGG | 0.477565 | 4.1:+32013851 | MS.gene003688:intron |
| TCTGTTCGAACCGGAGGAAA+GGG | 0.482236 | 4.1:+32013414 | MS.gene003688:CDS |
| CAGGCTCCTGAAGCAGGTGC+TGG | 0.494992 | 4.1:+32014669 | MS.gene003688:CDS |
| AGCTGAACAATTCCAGAAGC+AGG | 0.497000 | 4.1:+32014650 | MS.gene003688:CDS |
| CCTAATTGGTGGATAATGCT+AGG | 0.497579 | 4.1:-32014511 | None:intergenic |
| GACTGCTGCTGAGGAGGCCA+AGG | 0.501675 | 4.1:+32014758 | MS.gene003688:CDS |
| ATATTGACCTCCTCAATTTG+TGG | 0.501827 | 4.1:-32013948 | None:intergenic |
| CAACAACTACAGATGACAAA+AGG | 0.502653 | 4.1:+32013886 | MS.gene003688:CDS |
| GATGTCCCAGAGCTTGTCCC+AGG | 0.514432 | 4.1:+32014723 | MS.gene003688:CDS |
| GACCTCCTCAATTTGTGGGA+TGG | 0.524360 | 4.1:-32013943 | None:intergenic |
| CATCTGTAGTTGTTGTCTTG+TGG | 0.525038 | 4.1:-32013878 | None:intergenic |
| TTCTGTTCGAACCGGAGGAA+AGG | 0.525397 | 4.1:+32013413 | MS.gene003688:CDS |
| GCTAATACATGGGTTGTTAG+TGG | 0.526432 | 4.1:+32014145 | MS.gene003688:CDS |
| TCTCTCCTGGGACAAGCTCT+GGG | 0.528395 | 4.1:-32014728 | None:intergenic |
| GAATGCCATCCCACAAATTG+AGG | 0.534495 | 4.1:+32013938 | MS.gene003688:CDS |
| AACCCATGTATTAGCAGCAA+TGG | 0.539996 | 4.1:-32014137 | None:intergenic |
| TCTGACGGTACCCTTTCCTC+CGG | 0.545452 | 4.1:-32013424 | None:intergenic |
| AATTTCTTACTCTTTGTTTG+GGG | 0.553423 | 4.1:-32014172 | None:intergenic |
| TGTAGTTGTTGTCTTGTGGA+CGG | 0.561453 | 4.1:-32013874 | None:intergenic |
| CTAATTGGTGGATAATGCTA+GGG | 0.563275 | 4.1:-32014510 | None:intergenic |
| ATGGCCGGTTCTGTTCGAAC+CGG | 0.568678 | 4.1:+32013405 | MS.gene003688:CDS |
| GCCGGTTCTGTTCGAACCGG+AGG | 0.569814 | 4.1:+32013408 | MS.gene003688:CDS |
| CAGTCTCAAAAGTCTCTCCT+GGG | 0.576944 | 4.1:-32014740 | None:intergenic |
| GTCCATTGCTGCTAATACAT+GGG | 0.579320 | 4.1:+32014135 | MS.gene003688:CDS |
| ATCCAGTTCTTAAACCCCAA+AGG | 0.585033 | 4.1:+32013990 | MS.gene003688:CDS |
| GAAAAGTTGATGAAGATGGC+CGG | 0.594138 | 4.1:+32013390 | MS.gene003688:CDS |
| TCGTGAAAAGTTGATGAAGA+TGG | 0.598987 | 4.1:+32013386 | MS.gene003688:CDS |
| CAAAGCACATACCTAATTGG+TGG | 0.599520 | 4.1:-32014522 | None:intergenic |
| GAGGAAAGGGTACCGTCAGA+AGG | 0.619370 | 4.1:+32013427 | MS.gene003688:CDS |
| CATATAAATATACCTTCTGA+CGG | 0.639530 | 4.1:-32013439 | None:intergenic |
| TGCCATCCCACAAATTGAGG+AGG | 0.645011 | 4.1:+32013941 | MS.gene003688:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATTATTAAAAAAC+AGG | + | chr4.1:32014597-32014616 | MS.gene003688:intron | 10.0% |
| !!! | ATTTATTCTTTTTATATGAT+AGG | + | chr4.1:32014039-32014058 | MS.gene003688:intron | 10.0% |
| !! | AAAAACAAGTTATATTAGAA+TGG | - | chr4.1:32013481-32013500 | None:intergenic | 15.0% |
| !!! | AATATTTTAGATATATCTGT+CGG | + | chr4.1:32013546-32013565 | MS.gene003688:intron | 15.0% |
| !!! | GAAATTAATATGTCAATTTT+AGG | - | chr4.1:32014464-32014483 | None:intergenic | 15.0% |
| !! | AAGAAACATTCTTTAAACAA+TGG | - | chr4.1:32013747-32013766 | None:intergenic | 20.0% |
| !! | AATAAATGCTGGAAATATTA+TGG | - | chr4.1:32014026-32014045 | None:intergenic | 20.0% |
| !! | AATACTTTAAATGAAAACTC+TGG | + | chr4.1:32014272-32014291 | MS.gene003688:intron | 20.0% |
| !! | ATAAATGCTGGAAATATTAT+GGG | - | chr4.1:32014025-32014044 | None:intergenic | 20.0% |
| !! | CAATAGATATATGAAGAAAA+AGG | - | chr4.1:32014202-32014221 | None:intergenic | 20.0% |
| !! | CATATAAAAAGAATAAATGC+TGG | - | chr4.1:32014037-32014056 | None:intergenic | 20.0% |
| !! | TTTATATGTGAAACTCATTA+TGG | + | chr4.1:32013454-32013473 | MS.gene003688:intron | 20.0% |
| !!! | TAATTTCTTACTCTTTGTTT+GGG | - | chr4.1:32014176-32014195 | None:intergenic | 20.0% |
| ! | AAACAAAAGGCAGAAAATTA+CGG | - | chr4.1:32013836-32013855 | None:intergenic | 25.0% |
| ! | AATATTCAAAACGTTCAACT+TGG | - | chr4.1:32014587-32014606 | None:intergenic | 25.0% |
| ! | AGAAAACAATCAAAGCTTAA+TGG | - | chr4.1:32014102-32014121 | None:intergenic | 25.0% |
| ! | ATATTCAAAACGTTCAACTT+GGG | - | chr4.1:32014586-32014605 | None:intergenic | 25.0% |
| ! | CAATGCTATACAACTAATAT+TGG | - | chr4.1:32013514-32013533 | None:intergenic | 25.0% |
| ! | CATATAAATATACCTTCTGA+CGG | - | chr4.1:32013442-32013461 | None:intergenic | 25.0% |
| ! | GTAATTTCTTACTCTTTGTT+TGG | - | chr4.1:32014177-32014196 | None:intergenic | 25.0% |
| !! | AATTTCTTACTCTTTGTTTG+GGG | - | chr4.1:32014175-32014194 | None:intergenic | 25.0% |
| !! | ATTTTCCCACAATTTATGAA+CGG | + | chr4.1:32014384-32014403 | MS.gene003688:intron | 25.0% |
| !!! | AACTTTTTCAAAGGTTTGTT+TGG | + | chr4.1:32014545-32014564 | MS.gene003688:intron | 25.0% |
| !!! | TTATATTTTAGAGTACACCA+GGG | + | chr4.1:32014358-32014377 | MS.gene003688:intron | 25.0% |
| AAAAACAGGACCAGATAATT+TGG | + | chr4.1:32014611-32014630 | MS.gene003688:intron | 30.0% | |
| AAAATGAACAGATTCAGCAT+AGG | - | chr4.1:32014320-32014339 | None:intergenic | 30.0% | |
| AACAAAAGGCAGAAAATTAC+GGG | - | chr4.1:32013835-32013854 | None:intergenic | 30.0% | |
| ! | ATATCTGTCGGTTGTTATTA+GGG | + | chr4.1:32013558-32013577 | MS.gene003688:intron | 30.0% |
| ! | ATCATTTTCTTCTTGTACAG+TGG | - | chr4.1:32014700-32014719 | None:intergenic | 30.0% |
| ! | TATATCTGTCGGTTGTTATT+AGG | + | chr4.1:32013557-32013576 | MS.gene003688:intron | 30.0% |
| ! | TCTGTTCATTTTGCAATATC+TGG | + | chr4.1:32014328-32014347 | MS.gene003688:intron | 30.0% |
| ! | TTTTCCCACAATTTATGAAC+GGG | + | chr4.1:32014385-32014404 | MS.gene003688:intron | 30.0% |
| !! | TTCAGGTTTTCCAAATTATC+TGG | - | chr4.1:32014624-32014643 | None:intergenic | 30.0% |
| !! | TTCTTTCTGAGGTAAACAAA+AGG | - | chr4.1:32013849-32013868 | None:intergenic | 30.0% |
| !!! | ATCATGTGCTCTTTGTTTTT+GGG | + | chr4.1:32014418-32014437 | MS.gene003688:intron | 30.0% |
| !!! | GTTATATTTTAGAGTACACC+AGG | + | chr4.1:32014357-32014376 | MS.gene003688:intron | 30.0% |
| !!! | TATCATGTGCTCTTTGTTTT+TGG | + | chr4.1:32014417-32014436 | MS.gene003688:intron | 30.0% |
| !!! | TGTGCTTTGAACTTTTTCAA+AGG | + | chr4.1:32014536-32014555 | MS.gene003688:intron | 30.0% |
| ACACACTTGAATATGCTCAA+GGG | - | chr4.1:32013652-32013671 | None:intergenic | 35.0% | |
| ATATTGACCTCCTCAATTTG+TGG | - | chr4.1:32013951-32013970 | None:intergenic | 35.0% | |
| ATTCACACCTATTCTCTTCA+GGG | - | chr4.1:32013922-32013941 | None:intergenic | 35.0% | |
| ATTGTTCAGCTATCTTCTTC+AGG | - | chr4.1:32014641-32014660 | None:intergenic | 35.0% | |
| CAACAACTACAGATGACAAA+AGG | + | chr4.1:32013886-32013905 | MS.gene003688:CDS | 35.0% | |
| CAAGAATTCATGTCAGCATA+TGG | - | chr4.1:32013598-32013617 | None:intergenic | 35.0% | |
| GTTCAAAGCACATACCTAAT+TGG | - | chr4.1:32014528-32014547 | None:intergenic | 35.0% | |
| TATTGACCTCCTCAATTTGT+GGG | - | chr4.1:32013950-32013969 | None:intergenic | 35.0% | |
| TCAGAGTAAAAGAAAGAACG+AGG | - | chr4.1:32013695-32013714 | None:intergenic | 35.0% | |
| TGAGGAGGTCAATATCTTTA+AGG | + | chr4.1:32013956-32013975 | MS.gene003688:CDS | 35.0% | |
| TGTTTACCTCAGAAAGAAGA+AGG | + | chr4.1:32013851-32013870 | MS.gene003688:intron | 35.0% | |
| ! | AGGAATTGTGAAGTTTTGCT+TGG | - | chr4.1:32013675-32013694 | None:intergenic | 35.0% |
| ! | CTAATTGGTGGATAATGCTA+GGG | - | chr4.1:32014513-32014532 | None:intergenic | 35.0% |
| ! | TATGGGCTGATATTACCTTT+GGG | - | chr4.1:32014008-32014027 | None:intergenic | 35.0% |
| ! | TTATGGGCTGATATTACCTT+TGG | - | chr4.1:32014009-32014028 | None:intergenic | 35.0% |
| !! | TCGTGAAAAGTTGATGAAGA+TGG | + | chr4.1:32013386-32013405 | MS.gene003688:CDS | 35.0% |
| AACCCATGTATTAGCAGCAA+TGG | - | chr4.1:32014140-32014159 | None:intergenic | 40.0% | |
| AATTGTGGGAAAATATGCCC+TGG | - | chr4.1:32014378-32014397 | None:intergenic | 40.0% | |
| ATCCAGTTCTTAAACCCCAA+AGG | + | chr4.1:32013990-32014009 | MS.gene003688:CDS | 40.0% | |
| CAAAGCACATACCTAATTGG+TGG | - | chr4.1:32014525-32014544 | None:intergenic | 40.0% | |
| CACACTTGAATATGCTCAAG+GGG | - | chr4.1:32013651-32013670 | None:intergenic | 40.0% | |
| CATCTGTAGTTGTTGTCTTG+TGG | - | chr4.1:32013881-32013900 | None:intergenic | 40.0% | |
| CATTCACACCTATTCTCTTC+AGG | - | chr4.1:32013923-32013942 | None:intergenic | 40.0% | |
| CCTAGCATTATCCACCAATT+AGG | + | chr4.1:32014511-32014530 | MS.gene003688:CDS | 40.0% | |
| CTAGCCCGTTCATAAATTGT+GGG | - | chr4.1:32014392-32014411 | None:intergenic | 40.0% | |
| GACACACTTGAATATGCTCA+AGG | - | chr4.1:32013653-32013672 | None:intergenic | 40.0% | |
| GTCCATTGCTGCTAATACAT+GGG | + | chr4.1:32014135-32014154 | MS.gene003688:CDS | 40.0% | |
| TCAAAACGTTCAACTTGGGT+AGG | - | chr4.1:32014582-32014601 | None:intergenic | 40.0% | |
| TCTAGCCCGTTCATAAATTG+TGG | - | chr4.1:32014393-32014412 | None:intergenic | 40.0% | |
| TGAATATGCTCAAGGGGAAT+GGG | - | chr4.1:32013645-32013664 | None:intergenic | 40.0% | |
| TGTAGTTGTTGTCTTGTGGA+CGG | - | chr4.1:32013877-32013896 | None:intergenic | 40.0% | |
| TTGAATATGCTCAAGGGGAA+TGG | - | chr4.1:32013646-32013665 | None:intergenic | 40.0% | |
| TTTCACTTCTACAGAGTTGC+AGG | + | chr4.1:32014480-32014499 | MS.gene003688:intron | 40.0% | |
| ! | ATGGGCTGATATTACCTTTG+GGG | - | chr4.1:32014007-32014026 | None:intergenic | 40.0% |
| ! | CCTAATTGGTGGATAATGCT+AGG | - | chr4.1:32014514-32014533 | None:intergenic | 40.0% |
| ! | GCTAATACATGGGTTGTTAG+TGG | + | chr4.1:32014145-32014164 | MS.gene003688:CDS | 40.0% |
| !! | GAAAAGTTGATGAAGATGGC+CGG | + | chr4.1:32013390-32013409 | MS.gene003688:CDS | 40.0% |
| !! | TACCTTTGGGGTTTAAGAAC+TGG | - | chr4.1:32013995-32014014 | None:intergenic | 40.0% |
| AGCTGAACAATTCCAGAAGC+AGG | + | chr4.1:32014650-32014669 | MS.gene003688:CDS | 45.0% | |
| CAGTCTCAAAAGTCTCTCCT+GGG | - | chr4.1:32014743-32014762 | None:intergenic | 45.0% | |
| CGTCCATTGCTGCTAATACA+TGG | + | chr4.1:32014134-32014153 | MS.gene003688:CDS | 45.0% | |
| GAATATGCTCAAGGGGAATG+GGG | - | chr4.1:32013644-32013663 | None:intergenic | 45.0% | |
| GAATGCCATCCCACAAATTG+AGG | + | chr4.1:32013938-32013957 | MS.gene003688:CDS | 45.0% | |
| TTACGGGACAACTCAACTCT+TGG | - | chr4.1:32013819-32013838 | None:intergenic | 45.0% | |
| GACCTCCTCAATTTGTGGGA+TGG | - | chr4.1:32013946-32013965 | None:intergenic | 50.0% | |
| GCAGTCTCAAAAGTCTCTCC+TGG | - | chr4.1:32014744-32014763 | None:intergenic | 50.0% | |
| TCTGTTCGAACCGGAGGAAA+GGG | + | chr4.1:32013414-32013433 | MS.gene003688:CDS | 50.0% | |
| TGCCATCCCACAAATTGAGG+AGG | + | chr4.1:32013941-32013960 | MS.gene003688:CDS | 50.0% | |
| TTCTGTTCGAACCGGAGGAA+AGG | + | chr4.1:32013413-32013432 | MS.gene003688:CDS | 50.0% | |
| ! | CAGAGCACCCTGAAGAGAAT+AGG | + | chr4.1:32013912-32013931 | MS.gene003688:CDS | 50.0% |
| !!! | GACTTTTGAGACTGCTGCTG+AGG | + | chr4.1:32014749-32014768 | MS.gene003688:CDS | 50.0% |
| !!! | TTTTGAGACTGCTGCTGAGG+AGG | + | chr4.1:32014752-32014771 | MS.gene003688:CDS | 50.0% |
| GCAGCAATGGACGCTTGAAC+TGG | - | chr4.1:32014127-32014146 | None:intergenic | 55.0% | |
| GGACGGCCTTCTTCTTTCTG+AGG | - | chr4.1:32013860-32013879 | None:intergenic | 55.0% | |
| TCTCTCCTGGGACAAGCTCT+GGG | - | chr4.1:32014731-32014750 | None:intergenic | 55.0% | |
| TCTGACGGTACCCTTTCCTC+CGG | - | chr4.1:32013427-32013446 | None:intergenic | 55.0% | |
| ! | ATGGCCGGTTCTGTTCGAAC+CGG | + | chr4.1:32013405-32013424 | MS.gene003688:CDS | 55.0% |
| ! | TCCTCCGGTTCGAACAGAAC+CGG | - | chr4.1:32013412-32013431 | None:intergenic | 55.0% |
| !! | GAGGAAAGGGTACCGTCAGA+AGG | + | chr4.1:32013427-32013446 | MS.gene003688:CDS | 55.0% |
| CAGAAGCAGGCTCCTGAAGC+AGG | + | chr4.1:32014663-32014682 | MS.gene003688:CDS | 60.0% | |
| CTGCTTCAGGAGCCTGCTTC+TGG | - | chr4.1:32014665-32014684 | None:intergenic | 60.0% | |
| GATGTCCCAGAGCTTGTCCC+AGG | + | chr4.1:32014723-32014742 | MS.gene003688:CDS | 60.0% | |
| GCTGAACCAGCACCTGCTTC+AGG | - | chr4.1:32014678-32014697 | None:intergenic | 60.0% | |
| GTCTCTCCTGGGACAAGCTC+TGG | - | chr4.1:32014732-32014751 | None:intergenic | 60.0% | |
| CAGGCTCCTGAAGCAGGTGC+TGG | + | chr4.1:32014669-32014688 | MS.gene003688:CDS | 65.0% | |
| GACTGCTGCTGAGGAGGCCA+AGG | + | chr4.1:32014758-32014777 | MS.gene003688:CDS | 65.0% | |
| ! | GCCGGTTCTGTTCGAACCGG+AGG | + | chr4.1:32013408-32013427 | MS.gene003688:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 32013381 | 32014788 | 32013381 | ID=MS.gene003688 |
| chr4.1 | mRNA | 32013381 | 32014788 | 32013381 | ID=MS.gene003688.t1;Parent=MS.gene003688 |
| chr4.1 | exon | 32013381 | 32013448 | 32013381 | ID=MS.gene003688.t1.exon1;Parent=MS.gene003688.t1 |
| chr4.1 | CDS | 32013381 | 32013448 | 32013381 | ID=cds.MS.gene003688.t1;Parent=MS.gene003688.t1 |
| chr4.1 | exon | 32013863 | 32014011 | 32013863 | ID=MS.gene003688.t1.exon2;Parent=MS.gene003688.t1 |
| chr4.1 | CDS | 32013863 | 32014011 | 32013863 | ID=cds.MS.gene003688.t1;Parent=MS.gene003688.t1 |
| chr4.1 | exon | 32014128 | 32014184 | 32014128 | ID=MS.gene003688.t1.exon3;Parent=MS.gene003688.t1 |
| chr4.1 | CDS | 32014128 | 32014184 | 32014128 | ID=cds.MS.gene003688.t1;Parent=MS.gene003688.t1 |
| chr4.1 | exon | 32014494 | 32014532 | 32014494 | ID=MS.gene003688.t1.exon4;Parent=MS.gene003688.t1 |
| chr4.1 | CDS | 32014494 | 32014532 | 32014494 | ID=cds.MS.gene003688.t1;Parent=MS.gene003688.t1 |
| chr4.1 | exon | 32014619 | 32014788 | 32014619 | ID=MS.gene003688.t1.exon5;Parent=MS.gene003688.t1 |
| chr4.1 | CDS | 32014619 | 32014788 | 32014619 | ID=cds.MS.gene003688.t1;Parent=MS.gene003688.t1 |
| Gene Sequence |
| Protein sequence |
