AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003903

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003903.t1 MTR_4g066590 96.176 523 15 3 1 522 1 519 0.0 1031
MS.gene003903.t1 MTR_4g066630 88.123 522 60 1 1 522 5 524 0.0 941
MS.gene003903.t1 MTR_4g066580 74.903 514 127 1 4 517 8 519 0.0 832
MS.gene003903.t1 MTR_4g066630 88.621 457 50 1 1 457 5 459 0.0 824
MS.gene003903.t1 MTR_3g028720 73.062 516 135 1 6 517 3 518 0.0 815
MS.gene003903.t1 MTR_4g067040 95.122 410 17 1 1 410 1 407 0.0 808
MS.gene003903.t1 MTR_4g067040 94.602 389 18 1 1 389 1 386 0.0 764
MS.gene003903.t1 MTR_4g066630 88.863 422 45 1 1 422 5 424 0.0 761
MS.gene003903.t1 MTR_2g098540 70.741 499 144 1 13 511 9 505 0.0 753
MS.gene003903.t1 MTR_2g098790 68.102 511 160 2 1 511 5 512 0.0 747
MS.gene003903.t1 MTR_2g098520 71.667 480 136 0 32 511 29 508 0.0 742
MS.gene003903.t1 MTR_6g078450 68.616 513 158 2 8 518 6 517 0.0 738
MS.gene003903.t1 MTR_3g028720 73.085 457 119 1 6 458 3 459 0.0 721
MS.gene003903.t1 MTR_4g066210 68.058 479 153 0 33 511 39 517 0.0 715
MS.gene003903.t1 MTR_2g098540 73.026 456 123 0 56 511 6 461 0.0 715
MS.gene003903.t1 MTR_6g078330 66.277 513 168 2 12 520 9 520 0.0 712
MS.gene003903.t1 MTR_4g066240 65.278 504 172 1 8 511 10 510 0.0 709
MS.gene003903.t1 MTR_4g066640 64.961 508 172 3 8 514 12 514 0.0 708
MS.gene003903.t1 MTR_4g066240 65.149 505 172 2 8 511 10 511 0.0 705
MS.gene003903.t1 MTR_6g078380 66.602 515 165 2 8 521 13 521 0.0 699
MS.gene003903.t1 MTR_4g066630 89.096 376 39 1 1 376 5 378 0.0 680
MS.gene003903.t1 MTR_5g071520 65.184 517 170 2 4 511 7 522 0.0 679
MS.gene003903.t1 MTR_4g066580 74.764 424 103 2 4 426 8 428 0.0 678
MS.gene003903.t1 MTR_3g028720 73.050 423 110 1 6 424 3 425 0.0 662
MS.gene003903.t1 MTR_6g078450 72.813 423 115 0 36 458 35 457 0.0 655
MS.gene003903.t1 MTR_4g066330 62.598 508 160 3 6 511 12 491 0.0 648
MS.gene003903.t1 MTR_4g066340 68.056 432 138 0 80 511 6 437 0.0 633
MS.gene003903.t1 MTR_4g066280 61.277 501 164 3 13 511 19 491 0.0 632
MS.gene003903.t1 MTR_3g026280 61.975 476 176 2 36 511 21 491 0.0 631
MS.gene003903.t1 MTR_4g023000 60.924 476 180 3 36 511 23 492 0.0 608
MS.gene003903.t1 MTR_6g078330 68.029 416 133 0 105 520 1 416 0.0 605
MS.gene003903.t1 MTR_3g028720 72.610 387 102 1 6 388 3 389 0.0 603
MS.gene003903.t1 MTR_4g066240 64.578 415 144 1 8 422 10 421 0.0 577
MS.gene003903.t1 MTR_6g078330 65.842 404 136 1 117 520 15 416 0.0 567
MS.gene003903.t1 MTR_2g043200 59.874 476 157 6 42 511 70 517 0.0 563
MS.gene003903.t1 MTR_4g015420 55.777 502 182 7 22 511 50 523 0.0 558
MS.gene003903.t1 MTR_3g026400 54.175 515 220 6 4 515 10 511 0.0 558
MS.gene003903.t1 MTR_3g026620 52.148 512 236 5 4 515 10 512 0.0 537
MS.gene003903.t1 MTR_4g015460 54.599 511 192 10 19 517 23 505 0.0 531
MS.gene003903.t1 MTR_4g083000 51.859 511 234 6 9 515 3 505 0.0 529
MS.gene003903.t1 MTR_4g066640 65.013 383 128 3 8 389 12 389 0.0 528
MS.gene003903.t1 MTR_3g026400 54.583 480 208 6 37 515 10 480 0.0 526
MS.gene003903.t1 MTR_6g078330 67.857 364 112 2 12 371 9 371 0.0 525
MS.gene003903.t1 MTR_5g044000 50.000 524 233 7 13 511 1 520 2.14e-180 517
MS.gene003903.t1 MTR_4g081530 49.505 505 243 6 10 511 3 498 3.13e-167 483
MS.gene003903.t1 MTR_0110s0040 47.758 513 253 7 4 515 16 514 3.04e-166 481
MS.gene003903.t1 MTR_0110s0030 47.173 513 256 7 4 515 16 514 2.10e-165 479
MS.gene003903.t1 MTR_3g033790 49.053 475 228 5 37 511 19 479 4.27e-158 459
MS.gene003903.t1 MTR_3g033810 49.266 477 227 5 36 511 20 482 8.59e-158 458
MS.gene003903.t1 MTR_4g131810 47.423 485 238 5 42 517 33 509 7.20e-155 452
MS.gene003903.t1 MTR_2g022760 45.930 516 265 7 5 515 7 513 2.79e-150 440
MS.gene003903.t1 MTR_4g083000 51.807 415 192 4 105 515 1 411 2.53e-149 434
MS.gene003903.t1 MTR_4g016920 47.083 480 238 7 36 513 26 491 7.95e-146 429
MS.gene003903.t1 MTR_4g131800 47.269 476 245 5 42 515 521 992 1.43e-145 444
MS.gene003903.t1 MTR_2g079580 44.742 485 253 8 37 514 32 508 5.58e-145 427
MS.gene003903.t1 MTR_2g079550 45.567 485 249 8 37 514 30 506 1.26e-144 426
MS.gene003903.t1 MTR_7g068910 46.025 478 242 6 36 511 30 493 2.42e-144 425
MS.gene003903.t1 MTR_3g026400 57.143 357 149 3 7 362 7 360 9.07e-144 418
MS.gene003903.t1 MTR_7g033860 45.041 484 239 7 39 514 50 514 1.36e-141 418
MS.gene003903.t1 MTR_7g068910 45.082 488 242 7 36 511 30 503 4.09e-141 417
MS.gene003903.t1 MTR_2g022710 42.553 517 284 8 6 517 5 513 1.12e-139 413
MS.gene003903.t1 MTR_5g068740 44.625 493 244 9 38 522 28 499 8.72e-137 405
MS.gene003903.t1 MTR_1g088610 45.380 487 238 8 38 517 28 493 7.96e-136 407
MS.gene003903.t1 MTR_1g088610 33.858 127 77 2 397 522 503 623 3.51e-13 72.4
MS.gene003903.t1 MTR_0108s0030 42.917 480 237 5 39 514 5 451 1.10e-134 398
MS.gene003903.t1 MTR_7g051610 44.351 478 246 6 38 514 76 534 2.19e-127 382
MS.gene003903.t1 MTR_7g051510 43.243 481 251 5 38 516 76 536 8.82e-126 378
MS.gene003903.t1 MTR_0110s0040 47.716 394 194 5 4 395 16 399 1.29e-123 368
MS.gene003903.t1 MTR_7g051650 42.589 479 254 6 38 514 76 535 1.24e-122 370
MS.gene003903.t1 MTR_7g051650 42.050 478 254 5 38 514 76 531 1.35e-121 367
MS.gene003903.t1 MTR_2g022760 46.247 413 217 4 105 515 1 410 1.57e-121 363
MS.gene003903.t1 MTR_2g079580 45.780 391 200 6 37 422 32 415 4.70e-120 359
MS.gene003903.t1 MTR_7g068900 45.714 420 202 8 100 511 17 418 3.00e-119 360
MS.gene003903.t1 MTR_4g016920 45.966 409 206 6 105 511 1 396 7.83e-118 354
MS.gene003903.t1 MTR_1g088630 43.249 474 217 11 56 522 14 442 3.09e-117 353
MS.gene003903.t1 MTR_2g022710 41.703 458 255 7 6 458 5 455 2.32e-115 349
MS.gene003903.t1 MTR_2g022710 41.703 458 255 7 6 458 5 455 3.89e-115 349
MS.gene003903.t1 MTR_2g022710 41.687 415 237 4 105 517 1 412 1.17e-112 340
MS.gene003903.t1 MTR_2g022710 42.891 422 229 7 6 422 5 419 2.64e-112 340
MS.gene003903.t1 MTR_7g056747 43.405 417 210 4 99 514 9 400 1.11e-106 325
MS.gene003903.t1 MTR_2g022710 42.195 410 225 7 6 410 5 407 3.31e-106 323
MS.gene003903.t1 MTR_1g088630 50.311 322 124 6 39 356 29 318 8.20e-103 313
MS.gene003903.t1 MTR_2g022710 43.377 385 206 7 6 385 5 382 2.70e-100 309
MS.gene003903.t1 MTR_4g016920 53.933 267 120 2 105 370 1 265 6.06e-96 293
MS.gene003903.t1 MTR_1g088630 53.160 269 114 4 39 303 29 289 5.57e-93 286
MS.gene003903.t1 MTR_0110s0020 47.985 273 133 4 5 277 16 279 8.44e-88 273
MS.gene003903.t1 MTR_5g069350 43.860 171 55 5 351 511 48 187 1.26e-30 118
MS.gene003903.t1 MTR_4g122980 25.761 427 232 12 101 515 183 536 1.52e-28 120
MS.gene003903.t1 MTR_8g038650 40.152 132 66 2 237 358 24 152 4.77e-25 101
MS.gene003903.t1 MTR_8g038650 55.556 54 23 1 46 99 7 59 7.24e-13 67.0
MS.gene003903.t1 MTR_4g061170 80.488 41 6 1 460 498 24 64 3.88e-15 70.5
MS.gene003903.t1 MTR_7g028885 45.714 70 34 1 243 308 21 90 4.57e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003903.t1 AT5G44640 53.965 517 226 5 1 516 1 506 0.0 578
MS.gene003903.t1 AT2G44450 55.950 479 206 2 37 515 31 504 0.0 570
MS.gene003903.t1 AT5G42260 54.528 508 219 5 1 507 1 497 0.0 569
MS.gene003903.t1 AT2G44480 54.227 485 221 1 36 520 34 517 0.0 562
MS.gene003903.t1 AT2G44480 54.227 485 221 1 36 520 65 548 0.0 562
MS.gene003903.t1 AT3G60130 55.672 476 205 3 37 511 30 500 0.0 559
MS.gene003903.t1 AT2G25630 51.984 504 219 4 14 516 7 488 0.0 540
MS.gene003903.t1 AT5G24550 52.893 484 223 5 37 516 32 514 0.0 528
MS.gene003903.t1 AT3G60140 49.699 499 240 6 16 511 12 502 0.0 521
MS.gene003903.t1 AT5G24540 51.163 516 238 8 9 516 5 514 1.40e-180 518
MS.gene003903.t1 AT1G51470 54.071 479 206 7 36 512 44 510 2.71e-180 516
MS.gene003903.t1 AT1G47600 53.445 479 209 7 36 512 44 510 1.34e-177 509
MS.gene003903.t1 AT1G47600 53.445 479 208 7 36 512 44 509 3.12e-177 509
MS.gene003903.t1 AT1G26560 51.660 482 223 6 37 513 32 508 8.88e-177 508
MS.gene003903.t1 AT3G60120 51.452 482 223 7 36 511 13 489 1.11e-173 501
MS.gene003903.t1 AT2G44460 47.977 519 255 6 1 516 3 509 5.99e-170 493
MS.gene003903.t1 AT2G44470 47.035 489 255 4 27 512 19 506 4.05e-169 491
MS.gene003903.t1 AT5G54570 48.875 489 233 4 32 511 25 505 7.08e-169 488
MS.gene003903.t1 AT3G18080 49.897 487 234 7 32 516 34 512 2.42e-168 486
MS.gene003903.t1 AT2G44490 48.884 493 245 6 29 516 7 497 4.31e-168 487
MS.gene003903.t1 AT3G18070 48.577 492 233 9 28 516 21 495 7.64e-165 476
MS.gene003903.t1 AT5G25980 48.356 517 257 8 4 516 17 527 2.00e-164 478
MS.gene003903.t1 AT3G18070 48.780 492 238 9 28 516 21 501 6.78e-164 474
MS.gene003903.t1 AT2G44480 52.163 416 198 1 105 520 1 415 8.49e-164 471
MS.gene003903.t1 AT3G60130 53.865 414 185 3 99 511 40 448 1.05e-162 470
MS.gene003903.t1 AT5G36890 49.583 480 229 4 38 516 17 484 1.21e-158 461
MS.gene003903.t1 AT5G36890 49.583 480 229 4 38 516 17 484 1.23e-158 461
MS.gene003903.t1 AT3G09260 48.025 481 243 6 37 513 35 512 7.79e-157 457
MS.gene003903.t1 AT3G60130 52.899 414 178 4 99 511 40 437 7.60e-156 452
MS.gene003903.t1 AT2G32860 44.856 486 265 3 36 518 93 578 1.39e-155 457
MS.gene003903.t1 AT5G26000 47.093 516 253 10 8 511 4 511 1.95e-155 454
MS.gene003903.t1 AT2G32860 44.650 486 265 4 36 518 93 577 4.06e-154 453
MS.gene003903.t1 AT3G03640 44.574 516 275 6 1 511 3 512 6.08e-153 447
MS.gene003903.t1 AT5G24540 49.781 456 216 7 9 457 5 454 4.90e-152 442
MS.gene003903.t1 AT1G75940 46.843 491 245 9 37 516 37 522 6.83e-151 442
MS.gene003903.t1 AT3G21370 45.756 483 252 8 36 511 32 511 2.40e-149 438
MS.gene003903.t1 AT1G66280 46.230 504 257 9 16 511 13 510 8.46e-149 437
MS.gene003903.t1 AT1G52400 45.010 511 268 10 8 511 11 515 1.03e-148 437
MS.gene003903.t1 AT1G52400 45.010 511 268 10 8 511 11 515 1.03e-148 437
MS.gene003903.t1 AT5G28510 45.528 492 256 7 31 513 33 521 4.69e-148 435
MS.gene003903.t1 AT5G54570 47.816 435 211 3 32 458 25 451 9.38e-146 426
MS.gene003903.t1 AT2G44470 45.727 433 232 3 27 457 19 450 1.67e-145 426
MS.gene003903.t1 AT1G61820 46.458 480 249 7 42 517 35 510 2.36e-145 427
MS.gene003903.t1 AT1G66270 46.170 483 248 8 37 513 36 512 2.80e-145 428
MS.gene003903.t1 AT1G02850 47.158 475 234 7 38 511 27 485 6.69e-145 426
MS.gene003903.t1 AT3G60140 48.655 409 200 5 16 422 12 412 4.71e-144 422
MS.gene003903.t1 AT5G25980 47.702 457 231 6 4 458 17 467 8.69e-144 422
MS.gene003903.t1 AT5G25980 47.702 457 231 6 4 458 17 467 8.69e-144 422
MS.gene003903.t1 AT1G66270 45.963 483 247 9 37 513 36 510 3.12e-142 420
MS.gene003903.t1 AT1G02850 45.181 498 233 8 38 511 27 508 1.40e-140 416
MS.gene003903.t1 AT4G21760 42.775 519 284 7 6 520 21 530 2.53e-140 416
MS.gene003903.t1 AT1G02850 45.291 499 232 9 38 511 27 509 5.24e-139 412
MS.gene003903.t1 AT5G54570 47.837 416 200 4 105 511 1 408 3.38e-137 404
MS.gene003903.t1 AT4G27830 42.717 508 260 8 9 511 3 484 5.28e-137 406
MS.gene003903.t1 AT2G44480 60.256 312 122 2 36 347 65 374 2.78e-136 400
MS.gene003903.t1 AT1G60090 43.763 489 250 10 37 521 24 491 2.84e-136 404
MS.gene003903.t1 AT5G26000 46.204 461 230 8 8 458 4 456 1.08e-135 401
MS.gene003903.t1 AT1G02850 45.895 475 213 8 38 511 27 458 3.32e-135 400
MS.gene003903.t1 AT1G61810 45.570 474 250 7 42 511 38 507 8.06e-135 401
MS.gene003903.t1 AT2G44450 51.397 358 169 2 158 515 1 353 7.64e-134 392
MS.gene003903.t1 AT4G21760 41.811 519 279 8 6 520 21 520 3.90e-133 397
MS.gene003903.t1 AT4G22100 44.561 478 243 9 38 511 23 482 1.15e-132 395
MS.gene003903.t1 AT1G60090 42.485 499 249 11 37 521 24 498 2.57e-132 394
MS.gene003903.t1 AT1G61810 45.770 461 242 7 42 498 38 494 1.19e-130 391
MS.gene003903.t1 AT3G62750 42.245 490 251 8 26 511 12 473 9.72e-130 387
MS.gene003903.t1 AT3G62750 42.245 490 251 8 26 511 38 499 1.79e-129 387
MS.gene003903.t1 AT4G27820 43.958 480 246 7 36 511 22 482 6.34e-129 385
MS.gene003903.t1 AT1G45191 43.724 478 241 9 38 511 30 483 2.23e-127 381
MS.gene003903.t1 AT2G44470 45.383 379 204 3 27 403 19 396 3.88e-125 372
MS.gene003903.t1 AT1G45191 42.300 487 246 9 38 511 30 494 1.12e-123 372
MS.gene003903.t1 AT1G52400 43.640 456 245 9 8 457 11 460 1.31e-123 370
MS.gene003903.t1 AT3G62740 41.104 489 263 10 26 511 12 478 2.21e-123 371
MS.gene003903.t1 AT1G45191 42.469 478 253 9 38 511 30 489 2.38e-123 371
MS.gene003903.t1 AT1G45191 41.851 497 246 10 38 511 30 506 4.69e-122 369
MS.gene003903.t1 AT1G02850 46.569 408 185 6 38 422 27 424 2.45e-120 361
MS.gene003903.t1 AT5G48375 45.638 447 171 9 33 476 34 411 4.89e-120 360
MS.gene003903.t1 AT3G18070 50.599 334 158 5 28 361 21 347 6.41e-117 350
MS.gene003903.t1 AT3G62750 41.781 438 224 7 26 460 38 447 5.76e-112 340
MS.gene003903.t1 AT1G60270 48.256 344 167 5 37 377 24 359 5.11e-111 335
MS.gene003903.t1 AT1G51490 49.716 352 160 7 44 392 27 364 6.42e-110 333
MS.gene003903.t1 AT2G44460 47.802 364 186 4 156 516 1 363 8.79e-110 334
MS.gene003903.t1 AT3G62740 41.763 431 227 9 29 457 15 423 4.84e-109 332
MS.gene003903.t1 AT1G61810 44.039 411 222 7 105 511 1 407 6.30e-109 331
MS.gene003903.t1 AT1G61810 44.615 390 209 6 37 422 33 419 4.55e-107 326
MS.gene003903.t1 AT4G27830 41.951 410 221 5 105 511 1 396 5.49e-107 326
MS.gene003903.t1 AT1G45191 48.512 336 161 5 38 370 30 356 9.71e-106 323
MS.gene003903.t1 AT1G45191 48.512 336 161 5 38 370 30 356 1.01e-105 322
MS.gene003903.t1 AT3G62750 46.547 333 162 4 26 358 12 328 8.19e-105 318
MS.gene003903.t1 AT3G62750 46.547 333 162 4 26 358 12 328 8.19e-105 318
MS.gene003903.t1 AT3G62750 46.547 333 162 4 26 358 38 354 8.03e-104 318
MS.gene003903.t1 AT2G44480 47.557 307 160 1 214 520 6 311 1.71e-101 308
MS.gene003903.t1 AT3G18070 47.590 332 165 6 188 516 99 424 2.24e-101 311
MS.gene003903.t1 AT3G18070 52.778 72 33 1 28 99 21 91 2.93e-17 84.7
MS.gene003903.t1 AT4G27820 42.336 411 219 6 105 511 1 397 7.84e-100 308
MS.gene003903.t1 AT4G27820 42.336 411 219 6 105 511 1 397 7.84e-100 308
MS.gene003903.t1 AT1G61820 43.935 371 201 6 151 517 4 371 1.25e-99 305
MS.gene003903.t1 AT3G62750 39.903 411 220 7 105 511 1 388 2.54e-97 301
MS.gene003903.t1 AT3G62750 39.903 411 220 7 105 511 1 388 2.54e-97 301
MS.gene003903.t1 AT3G18070 46.855 318 160 6 202 516 1 312 2.25e-94 290
MS.gene003903.t1 AT1G61810 50.370 270 132 2 37 306 33 300 3.29e-88 274
MS.gene003903.t1 AT1G60270 47.101 276 139 4 105 377 1 272 5.91e-82 257
MS.gene003903.t1 AT3G18070 44.672 244 131 3 183 424 94 335 6.36e-67 220
MS.gene003903.t1 AT3G18070 52.778 72 33 1 28 99 21 91 1.91e-17 84.3
MS.gene003903.t1 AT3G18070 44.000 225 122 3 202 424 1 223 3.78e-60 198
MS.gene003903.t1 AT5G16580 36.025 322 177 7 152 468 2 299 1.20e-48 170
MS.gene003903.t1 AT3G06510 24.943 441 254 14 100 515 159 547 3.51e-29 122
MS.gene003903.t1 AT3G06510 25.234 428 235 14 100 515 159 513 2.83e-28 119

Find 92 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTAATTATATAGGTTTA+TGG 0.152707 4.4:+39599987 MS.gene003903:intron
TTGATTTATATTACTGAAAA+TGG 0.156629 4.4:+39600524 MS.gene003903:CDS
GATACCAACATCTTCCTTAT+AGG 0.222751 4.4:-39599179 None:intergenic
CACCAGGTCGATGCTCTTCT+TGG 0.247168 4.4:+39599644 MS.gene003903:CDS
AATTGCACCGGTGGTGATTC+TGG 0.263758 4.4:+39599676 MS.gene003903:CDS
TTTCCAGAAGGCTTTATCTT+TGG 0.265156 4.4:+39599013 MS.gene003903:CDS
GAATCACCACCGGTGCAATT+TGG 0.269114 4.4:-39599673 None:intergenic
TGATAATGTGCAACTAAATA+TGG 0.279620 4.4:-39599706 None:intergenic
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4.4:+39599080 MS.gene003903:CDS
ACTTTCAGGTTGCTTCAAAT+TGG 0.301411 4.4:+39600435 MS.gene003903:intron
GAACTTTGCTTCAAAACATT+TGG 0.306336 4.4:+39599544 MS.gene003903:CDS
ATCGCTTGAAGAATCTCTTA+TGG 0.310065 4.4:+39600724 MS.gene003903:CDS
CAACAACCTCATTAATGAAT+TGG 0.310357 4.4:+39599309 MS.gene003903:CDS
AAGGGTTATACTGTGAGATT+TGG 0.344341 4.4:+39600961 MS.gene003903:CDS
TAGACAACAAGAGAGAAAAT+AGG 0.369329 4.4:-39598901 None:intergenic
AGATAACAAACTTGATATAA+AGG 0.370220 4.4:+39599837 MS.gene003903:CDS
ATACCAACATCTTCCTTATA+GGG 0.370834 4.4:-39599178 None:intergenic
CCTCCACTTAGTTTCCCATC+TGG 0.378131 4.4:-39599259 None:intergenic
AGAGCTACAGACTTTATGTT+TGG 0.379843 4.4:+39599868 MS.gene003903:CDS
CAAACTCTAGAAGATGAATA+TGG 0.381482 4.4:+39599382 MS.gene003903:CDS
CTCCACTTAGTTTCCCATCT+GGG 0.388126 4.4:-39599258 None:intergenic
GTTCCAAAGATAAAGCCTTC+TGG 0.389702 4.4:-39599016 None:intergenic
TGCAAATAGGTTCATTGAAT+AGG 0.394366 4.4:+39598984 MS.gene003903:CDS
ATTAATGAATTGGTGGCAAA+TGG 0.397068 4.4:+39599319 MS.gene003903:CDS
TATTCATCTTCTAGAGTTTG+AGG 0.401353 4.4:-39599379 None:intergenic
GTCTCTCAAAAGGGTGTGAT+AGG 0.412344 4.4:+39599778 MS.gene003903:CDS
AACACTGCACCAGTGCAAAT+AGG 0.423956 4.4:+39598971 MS.gene003903:CDS
CAAATATCAAGTCTCTCAAA+AGG 0.425107 4.4:+39599768 MS.gene003903:CDS
TGGTAACCTTGTTCTTACTA+AGG 0.438507 4.4:-39600049 None:intergenic
AGAAAGTCTCGAATTGCTCT+TGG 0.442143 4.4:-39600470 None:intergenic
TGACTCGTATCATCCCTATA+AGG 0.448541 4.4:+39599165 MS.gene003903:CDS
TGGATAATCTCCATTGGCTA+AGG 0.461168 4.4:-39600013 None:intergenic
AGTGAATCTGTTAGGTAGCT+AGG 0.464690 4.4:-39600183 None:intergenic
TTTCAGTAATATAAATCAAA+GGG 0.466034 4.4:-39600520 None:intergenic
AAAAGATATCAAAAGCTCTC+AGG 0.470702 4.4:+39601015 MS.gene003903:CDS
GGTTTGCCATTGCTTAATTG+AGG 0.479254 4.4:-39600162 None:intergenic
AACGAGAAAGTGAATCTGTT+AGG 0.479548 4.4:-39600191 None:intergenic
CTACAGACTTTATGTTTGGA+TGG 0.487340 4.4:+39599872 MS.gene003903:CDS
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4.4:+39599067 MS.gene003903:CDS
TTGCCACCAATTCATTAATG+AGG 0.489921 4.4:-39599315 None:intergenic
GAGTATTCTAGACCAAGAAA+TGG 0.492330 4.4:-39599236 None:intergenic
AACACTTACATTTAGACCAA+TGG 0.493905 4.4:-39600336 None:intergenic
TCATTTATTCTATCTTAATG+AGG 0.494555 4.4:+39600775 MS.gene003903:CDS
CAACCTCATTAATGAATTGG+TGG 0.495036 4.4:+39599312 MS.gene003903:CDS
TGGGTATGCAAATGGTGAAA+TGG 0.498834 4.4:+39599621 MS.gene003903:CDS
AGTTTACAAAAGAGCAATCA+AGG 0.505341 4.4:+39600073 MS.gene003903:CDS
ATGTGCAACTAAATATGGTT+CGG 0.507608 4.4:-39599701 None:intergenic
CCATGGACATACAGTCAAGA+TGG 0.510839 4.4:+39599601 MS.gene003903:CDS
GGATAATCTCCATTGGCTAA+GGG 0.515711 4.4:-39600012 None:intergenic
TTCAATGAACCTATTTGCAC+TGG 0.515756 4.4:-39598980 None:intergenic
AGTCAAGATGGGTATGCAAA+TGG 0.528018 4.4:+39599613 MS.gene003903:CDS
TTCATCATTACTTTAACAGA+AGG 0.528077 4.4:+39598935 MS.gene003903:CDS
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4.4:+39599081 MS.gene003903:CDS
TCTTCTGCATATCAATATGA+AGG 0.549189 4.4:+39599043 MS.gene003903:CDS
TTGGAGATAGAGTAAAACAT+TGG 0.559088 4.4:+39599563 MS.gene003903:CDS
TTTATGGATCCCTTAGCCAA+TGG 0.559848 4.4:+39600003 MS.gene003903:CDS
TAGGGCTGGTGTAAATGTGA+AGG 0.560223 4.4:+39600897 MS.gene003903:intron
AAAATCAGTGATGGAAACAA+TGG 0.563147 4.4:+39599130 MS.gene003903:CDS
TGGTCTAGAATACTCCCAGA+TGG 0.563550 4.4:+39599244 MS.gene003903:CDS
CCATCTTGACTGTATGTCCA+TGG 0.566884 4.4:-39599601 None:intergenic
AAATATCAAGTCTCTCAAAA+GGG 0.567104 4.4:+39599769 MS.gene003903:CDS
ATCAAAAGCTCTCAGGATTG+TGG 0.567379 4.4:+39601022 MS.gene003903:CDS
GTGAAAGTATCCCATATACT+TGG 0.569026 4.4:-39599091 None:intergenic
CTCCCAGATGGGAAACTAAG+TGG 0.570318 4.4:+39599256 MS.gene003903:CDS
GCAAATGGTGAAATGGCACC+AGG 0.576425 4.4:+39599628 MS.gene003903:CDS
CATCCCTATAAGGAAGATGT+TGG 0.585993 4.4:+39599175 MS.gene003903:CDS
TCAAGTTTGTTATCTGAGAG+TGG 0.587930 4.4:-39599829 None:intergenic
AACCAAGAAGAGCATCGACC+TGG 0.592148 4.4:-39599646 None:intergenic
TGGTTGAATCCAAATTGCAC+CGG 0.592901 4.4:+39599664 MS.gene003903:CDS
AGTGGAGGAATTAATCAAGA+AGG 0.596031 4.4:+39599274 MS.gene003903:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4.4:+39599061 MS.gene003903:CDS
GGAAGATGTTGGTATCATGA+AGG 0.599227 4.4:+39599186 MS.gene003903:CDS
ACTTCTAGCTCATGCAGCAG+TGG 0.599488 4.4:+39599729 MS.gene003903:CDS
GGATAACTTTAAATGAACCA+TGG 0.601451 4.4:+39599584 MS.gene003903:CDS
CATGGACATACAGTCAAGAT+GGG 0.602027 4.4:+39599602 MS.gene003903:CDS
AGGGCTGGTGTAAATGTGAA+GGG 0.603543 4.4:+39600898 MS.gene003903:intron
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4.4:+39599058 MS.gene003903:CDS
GGTCTAGAATACTCCCAGAT+GGG 0.607544 4.4:+39599245 MS.gene003903:CDS
GTGATTGCAGTTGAACGTGA+TGG 0.617225 4.4:+39600308 MS.gene003903:intron
TTCGGTTCCAGAATCACCAC+CGG 0.630837 4.4:-39599683 None:intergenic
ATGTGAAGGGATACTTTGCA+TGG 0.635220 4.4:+39600911 MS.gene003903:CDS
GGGTGTGATAGGTTTAACAT+TGG 0.637080 4.4:+39599789 MS.gene003903:CDS
GATGCACCTCAATTAAGCAA+TGG 0.645151 4.4:+39600156 MS.gene003903:CDS
TGTATTACTCACATGATGAG+AGG 0.655919 4.4:-39599418 None:intergenic
TGAGAGCCTTAGTAAGAACA+AGG 0.667098 4.4:+39600043 MS.gene003903:CDS
TTGAATCCAAATTGCACCGG+TGG 0.672179 4.4:+39599667 MS.gene003903:CDS
GATTCTTCAAGCGATAACGA+TGG 0.674001 4.4:-39600716 None:intergenic
GAGCAATCAAGGCTAGTGAG+TGG 0.679451 4.4:+39600084 MS.gene003903:CDS
ACTCTAGAAGATGAATATGG+CGG 0.692578 4.4:+39599385 MS.gene003903:CDS
CCAGATGGGAAACTAAGTGG+AGG 0.696893 4.4:+39599259 MS.gene003903:CDS
AAAAGACTTTCAAGACTATG+CGG 0.704652 4.4:+39599522 MS.gene003903:CDS
TGGAAACAATGGAGACGTTG+CGG 0.708998 4.4:+39599141 MS.gene003903:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATAAATTTAAATTAA+TGG + chr4.4:39600267-39600286 MS.gene003903:intron 0.0%
!! AAATTTGTAATTAATGAATT+TGG + chr4.4:39600405-39600424 MS.gene003903:intron 10.0%
!! ATTTCATTGTTTAATTATAT+AGG + chr4.4:39599980-39599999 MS.gene003903:intron 10.0%
!!! TTTCTTTTAATGTAAATATA+GGG + chr4.4:39600879-39600898 MS.gene003903:intron 10.0%
!! TGTTTAATTATATAGGTTTA+TGG + chr4.4:39599987-39600006 MS.gene003903:intron 15.0%
!! TTGATTTATATTACTGAAAA+TGG + chr4.4:39600524-39600543 MS.gene003903:CDS 15.0%
!! TTTCAGTAATATAAATCAAA+GGG - chr4.4:39600523-39600542 None:intergenic 15.0%
!!! CTTTCTTTTAATGTAAATAT+AGG + chr4.4:39600878-39600897 MS.gene003903:intron 15.0%
!!! TTTTCAGTAATATAAATCAA+AGG - chr4.4:39600524-39600543 None:intergenic 15.0%
!! AGATAACAAACTTGATATAA+AGG + chr4.4:39599837-39599856 MS.gene003903:CDS 20.0%
!! TCATTTATTCTATCTTAATG+AGG + chr4.4:39600775-39600794 MS.gene003903:CDS 20.0%
!!! AATTTGGTTATTTTACTTTC+AGG + chr4.4:39600421-39600440 MS.gene003903:intron 20.0%
!!! ATTTGTAACTCTTTTTCATT+GGG + chr4.4:39599351-39599370 MS.gene003903:CDS 20.0%
!!! TAAGTTGTTAGAAATTTTGA+GGG - chr4.4:39600365-39600384 None:intergenic 20.0%
!!! TTTTCATGTAAGAACATTTT+TGG + chr4.4:39600213-39600232 MS.gene003903:intron 20.0%
! AAATATCAAGTCTCTCAAAA+GGG + chr4.4:39599769-39599788 MS.gene003903:CDS 25.0%
! ACCTTTGTAGATTACAAAAA+TGG + chr4.4:39600988-39601007 MS.gene003903:CDS 25.0%
! ACTTATTCCAAATTAACACA+AGG + chr4.4:39599932-39599951 MS.gene003903:intron 25.0%
! ATCTATTTCACTTTCTTTCA+TGG + chr4.4:39600836-39600855 MS.gene003903:intron 25.0%
! CAATGAAAAAGAGTTACAAA+TGG - chr4.4:39599352-39599371 None:intergenic 25.0%
! CTAACAACTTACATGTTATT+TGG + chr4.4:39600374-39600393 MS.gene003903:intron 25.0%
! TAACTTAGTTTAAATACACG+TGG + chr4.4:39599460-39599479 MS.gene003903:intron 25.0%
! TATATCTCCTTGTGTTAATT+TGG - chr4.4:39599942-39599961 None:intergenic 25.0%
! TTCATCATTACTTTAACAGA+AGG + chr4.4:39598935-39598954 MS.gene003903:CDS 25.0%
!! CTTTGTTAGACAATTTTGAA+TGG + chr4.4:39600935-39600954 MS.gene003903:CDS 25.0%
!! GTAAGTTGTTAGAAATTTTG+AGG - chr4.4:39600366-39600385 None:intergenic 25.0%
!! TGATAATGTGCAACTAAATA+TGG - chr4.4:39599709-39599728 None:intergenic 25.0%
!! TTTTAATGTAAATATAGGGC+TGG + chr4.4:39600883-39600902 MS.gene003903:intron 25.0%
!!! AACTTTTTCATAATGTGTGT+AGG + chr4.4:39600674-39600693 MS.gene003903:intron 25.0%
!!! ACCATTTTTGTAATCTACAA+AGG - chr4.4:39600992-39601011 None:intergenic 25.0%
!!! AGTGGTTCATTTGATTTTAT+TGG + chr4.4:39600102-39600121 MS.gene003903:CDS 25.0%
!!! CATTTGTAACTCTTTTTCAT+TGG + chr4.4:39599350-39599369 MS.gene003903:CDS 25.0%
AAAAGACTTTCAAGACTATG+CGG + chr4.4:39599522-39599541 MS.gene003903:CDS 30.0%
AAAAGATATCAAAAGCTCTC+AGG + chr4.4:39601015-39601034 MS.gene003903:CDS 30.0%
AACACTTACATTTAGACCAA+TGG - chr4.4:39600339-39600358 None:intergenic 30.0%
AGTTTACAAAAGAGCAATCA+AGG + chr4.4:39600073-39600092 MS.gene003903:CDS 30.0%
ATACCAACATCTTCCTTATA+GGG - chr4.4:39599181-39599200 None:intergenic 30.0%
ATGTGCAACTAAATATGGTT+CGG - chr4.4:39599704-39599723 None:intergenic 30.0%
CAAATATCAAGTCTCTCAAA+AGG + chr4.4:39599768-39599787 MS.gene003903:CDS 30.0%
CAACAACCTCATTAATGAAT+TGG + chr4.4:39599309-39599328 MS.gene003903:CDS 30.0%
GAACTTTGCTTCAAAACATT+TGG + chr4.4:39599544-39599563 MS.gene003903:CDS 30.0%
GGATAACTTTAAATGAACCA+TGG + chr4.4:39599584-39599603 MS.gene003903:CDS 30.0%
TAGACAACAAGAGAGAAAAT+AGG - chr4.4:39598904-39598923 None:intergenic 30.0%
TATCCAGAAAAAATCAGTGA+TGG + chr4.4:39599121-39599140 MS.gene003903:CDS 30.0%
TCTTCTGCATATCAATATGA+AGG + chr4.4:39599043-39599062 MS.gene003903:CDS 30.0%
TGCAAATAGGTTCATTGAAT+AGG + chr4.4:39598984-39599003 MS.gene003903:CDS 30.0%
TTGGAGATAGAGTAAAACAT+TGG + chr4.4:39599563-39599582 MS.gene003903:CDS 30.0%
! AAAATCAGTGATGGAAACAA+TGG + chr4.4:39599130-39599149 MS.gene003903:CDS 30.0%
! AATAGGAATGATTTTCCAGA+AGG + chr4.4:39599001-39599020 MS.gene003903:CDS 30.0%
! ATTAATGAATTGGTGGCAAA+TGG + chr4.4:39599319-39599338 MS.gene003903:CDS 30.0%
! CAAACTCTAGAAGATGAATA+TGG + chr4.4:39599382-39599401 MS.gene003903:CDS 30.0%
! CATACAGATTTTCCATTTCT+TGG + chr4.4:39599224-39599243 MS.gene003903:CDS 30.0%
! GATTGCTCTTTTGTAAACTT+TGG - chr4.4:39600072-39600091 None:intergenic 30.0%
!! CTTTTGAGAGACTTGATATT+TGG - chr4.4:39599770-39599789 None:intergenic 30.0%
!! TATTCATCTTCTAGAGTTTG+AGG - chr4.4:39599382-39599401 None:intergenic 30.0%
!!! GTTTTTTGGATAATCTCCAT+TGG - chr4.4:39600022-39600041 None:intergenic 30.0%
!!! TTTCCATCACTGATTTTTTC+TGG - chr4.4:39599127-39599146 None:intergenic 30.0%
AACGAGAAAGTGAATCTGTT+AGG - chr4.4:39600194-39600213 None:intergenic 35.0%
AAGGGTTATACTGTGAGATT+TGG + chr4.4:39600961-39600980 MS.gene003903:CDS 35.0%
AGAGCTACAGACTTTATGTT+TGG + chr4.4:39599868-39599887 MS.gene003903:CDS 35.0%
AGTGGAGGAATTAATCAAGA+AGG + chr4.4:39599274-39599293 MS.gene003903:CDS 35.0%
ATCGCTTGAAGAATCTCTTA+TGG + chr4.4:39600724-39600743 MS.gene003903:CDS 35.0%
CAACCTCATTAATGAATTGG+TGG + chr4.4:39599312-39599331 MS.gene003903:CDS 35.0%
CTACAGACTTTATGTTTGGA+TGG + chr4.4:39599872-39599891 MS.gene003903:CDS 35.0%
GAGTATTCTAGACCAAGAAA+TGG - chr4.4:39599239-39599258 None:intergenic 35.0%
GATACCAACATCTTCCTTAT+AGG - chr4.4:39599182-39599201 None:intergenic 35.0%
GCAATCACACACACAAAAAA+TGG - chr4.4:39600296-39600315 None:intergenic 35.0%
TGGTAACCTTGTTCTTACTA+AGG - chr4.4:39600052-39600071 None:intergenic 35.0%
TGTATTACTCACATGATGAG+AGG - chr4.4:39599421-39599440 None:intergenic 35.0%
TTCAATGAACCTATTTGCAC+TGG - chr4.4:39598983-39599002 None:intergenic 35.0%
TTGCCACCAATTCATTAATG+AGG - chr4.4:39599318-39599337 None:intergenic 35.0%
! ACTCTAGAAGATGAATATGG+CGG + chr4.4:39599385-39599404 MS.gene003903:CDS 35.0%
! AGACAATTTTGAATGGCACA+AGG + chr4.4:39600942-39600961 MS.gene003903:CDS 35.0%
! GACAATTTTGAATGGCACAA+GGG + chr4.4:39600943-39600962 MS.gene003903:CDS 35.0%
! TTTCCAGAAGGCTTTATCTT+TGG + chr4.4:39599013-39599032 MS.gene003903:CDS 35.0%
!! ACTTTCAGGTTGCTTCAAAT+TGG + chr4.4:39600435-39600454 MS.gene003903:intron 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr4.4:39599094-39599113 None:intergenic 35.0%
!! TCAAGTTTGTTATCTGAGAG+TGG - chr4.4:39599832-39599851 None:intergenic 35.0%
!!! ACTAAGGCTCTCATGTTTTT+TGG - chr4.4:39600036-39600055 None:intergenic 35.0%
AGAAAGTCTCGAATTGCTCT+TGG - chr4.4:39600473-39600492 None:intergenic 40.0%
AGTCAAGATGGGTATGCAAA+TGG + chr4.4:39599613-39599632 MS.gene003903:CDS 40.0%
AGTGAATCTGTTAGGTAGCT+AGG - chr4.4:39600186-39600205 None:intergenic 40.0%
ATCAAAAGCTCTCAGGATTG+TGG + chr4.4:39601022-39601041 MS.gene003903:CDS 40.0%
ATGTGAAGGGATACTTTGCA+TGG + chr4.4:39600911-39600930 MS.gene003903:CDS 40.0%
CATCCCTATAAGGAAGATGT+TGG + chr4.4:39599175-39599194 MS.gene003903:CDS 40.0%
CATGGACATACAGTCAAGAT+GGG + chr4.4:39599602-39599621 MS.gene003903:CDS 40.0%
GATGCACCTCAATTAAGCAA+TGG + chr4.4:39600156-39600175 MS.gene003903:CDS 40.0%
GATTCTTCAAGCGATAACGA+TGG - chr4.4:39600719-39600738 None:intergenic 40.0%
GGAAGATGTTGGTATCATGA+AGG + chr4.4:39599186-39599205 MS.gene003903:CDS 40.0%
GGGTGTGATAGGTTTAACAT+TGG + chr4.4:39599789-39599808 MS.gene003903:CDS 40.0%
GGTTTGCCATTGCTTAATTG+AGG - chr4.4:39600165-39600184 None:intergenic 40.0%
GTTCCAAAGATAAAGCCTTC+TGG - chr4.4:39599019-39599038 None:intergenic 40.0%
TGACTCGTATCATCCCTATA+AGG + chr4.4:39599165-39599184 MS.gene003903:CDS 40.0%
TGAGAGCCTTAGTAAGAACA+AGG + chr4.4:39600043-39600062 MS.gene003903:CDS 40.0%
TGGAAGAGGACCAAGTATAT+GGG + chr4.4:39599081-39599100 MS.gene003903:CDS 40.0%
TGGGTATGCAAATGGTGAAA+TGG + chr4.4:39599621-39599640 MS.gene003903:CDS 40.0%
TGGTTGAATCCAAATTGCAC+CGG + chr4.4:39599664-39599683 MS.gene003903:CDS 40.0%
TTTATGGATCCCTTAGCCAA+TGG + chr4.4:39600003-39600022 MS.gene003903:CDS 40.0%
! GAACGTGATGGAAAAACCAT+TGG + chr4.4:39600320-39600339 MS.gene003903:CDS 40.0%
! GGATAATCTCCATTGGCTAA+GGG - chr4.4:39600015-39600034 None:intergenic 40.0%
! TGGATAATCTCCATTGGCTA+AGG - chr4.4:39600016-39600035 None:intergenic 40.0%
AACACTGCACCAGTGCAAAT+AGG + chr4.4:39598971-39598990 MS.gene003903:CDS 45.0%
CCATCTTGACTGTATGTCCA+TGG - chr4.4:39599604-39599623 None:intergenic 45.0%
CCATGGACATACAGTCAAGA+TGG + chr4.4:39599601-39599620 MS.gene003903:CDS 45.0%
CTCCACTTAGTTTCCCATCT+GGG - chr4.4:39599261-39599280 None:intergenic 45.0%
GTGATTGCAGTTGAACGTGA+TGG + chr4.4:39600308-39600327 MS.gene003903:intron 45.0%
GTGGAAGAGGACCAAGTATA+TGG + chr4.4:39599080-39599099 MS.gene003903:CDS 45.0%
TGGAAACAATGGAGACGTTG+CGG + chr4.4:39599141-39599160 MS.gene003903:CDS 45.0%
TTGAATCCAAATTGCACCGG+TGG + chr4.4:39599667-39599686 MS.gene003903:CDS 45.0%
! AGGGCTGGTGTAAATGTGAA+GGG + chr4.4:39600898-39600917 MS.gene003903:intron 45.0%
! GGTCTAGAATACTCCCAGAT+GGG + chr4.4:39599245-39599264 MS.gene003903:CDS 45.0%
! GTCTCTCAAAAGGGTGTGAT+AGG + chr4.4:39599778-39599797 MS.gene003903:CDS 45.0%
! TAGGGCTGGTGTAAATGTGA+AGG + chr4.4:39600897-39600916 MS.gene003903:intron 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG + chr4.4:39599058-39599077 MS.gene003903:CDS 45.0%
! TGGTCTAGAATACTCCCAGA+TGG + chr4.4:39599244-39599263 MS.gene003903:CDS 45.0%
CCAGATGGGAAACTAAGTGG+AGG + chr4.4:39599259-39599278 MS.gene003903:CDS 50.0%
CCTCCACTTAGTTTCCCATC+TGG - chr4.4:39599262-39599281 None:intergenic 50.0%
CTCCCAGATGGGAAACTAAG+TGG + chr4.4:39599256-39599275 MS.gene003903:CDS 50.0%
GAATCACCACCGGTGCAATT+TGG - chr4.4:39599676-39599695 None:intergenic 50.0%
GAGCAATCAAGGCTAGTGAG+TGG + chr4.4:39600084-39600103 MS.gene003903:CDS 50.0%
GCAAATGGTGAAATGGCACC+AGG + chr4.4:39599628-39599647 MS.gene003903:CDS 50.0%
TTCGGTTCCAGAATCACCAC+CGG - chr4.4:39599686-39599705 None:intergenic 50.0%
! AATTGCACCGGTGGTGATTC+TGG + chr4.4:39599676-39599695 MS.gene003903:CDS 50.0%
!! AACCAAGAAGAGCATCGACC+TGG - chr4.4:39599649-39599668 None:intergenic 50.0%
!! ACTTCTAGCTCATGCAGCAG+TGG + chr4.4:39599729-39599748 MS.gene003903:CDS 50.0%
CACCAGGTCGATGCTCTTCT+TGG + chr4.4:39599644-39599663 MS.gene003903:CDS 55.0%
GCAGCAAGTGAAGGTGGAAG+AGG + chr4.4:39599067-39599086 MS.gene003903:CDS 55.0%
! GAAGGTGCAGCAAGTGAAGG+TGG + chr4.4:39599061-39599080 MS.gene003903:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 39598890 39601095 39598890 ID=MS.gene003903
chr4.4 mRNA 39598890 39601095 39598890 ID=MS.gene003903.t1;Parent=MS.gene003903
chr4.4 exon 39598890 39599428 39598890 ID=MS.gene003903.t1.exon1;Parent=MS.gene003903.t1
chr4.4 CDS 39598890 39599428 39598890 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39599522 39599893 39599522 ID=MS.gene003903.t1.exon2;Parent=MS.gene003903.t1
chr4.4 CDS 39599522 39599893 39599522 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39600002 39600219 39600002 ID=MS.gene003903.t1.exon3;Parent=MS.gene003903.t1
chr4.4 CDS 39600002 39600219 39600002 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39600318 39600349 39600318 ID=MS.gene003903.t1.exon4;Parent=MS.gene003903.t1
chr4.4 CDS 39600318 39600349 39600318 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39600443 39600545 39600443 ID=MS.gene003903.t1.exon5;Parent=MS.gene003903.t1
chr4.4 CDS 39600443 39600545 39600443 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39600696 39600804 39600696 ID=MS.gene003903.t1.exon6;Parent=MS.gene003903.t1
chr4.4 CDS 39600696 39600804 39600696 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
chr4.4 exon 39600900 39601095 39600900 ID=MS.gene003903.t1.exon7;Parent=MS.gene003903.t1
chr4.4 CDS 39600900 39601095 39600900 ID=cds.MS.gene003903.t1;Parent=MS.gene003903.t1
Gene Sequence

>MS.gene003903

ATGAGATATTTCCTATTTTCTCTCTTGTTGTCTATAGTTTCAACATTCATCATTACTTTAACAGAAGGTCAAGAAATAATTAACACTGCACCAGTGCAAATAGGTTCATTGAATAGGAATGATTTTCCAGAAGGCTTTATCTTTGGAACAGCATCTTCTGCATATCAATATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCAGAAAAAATCAGTGATGGAAACAATGGAGACGTTGCGGTTGACTCGTATCATCCCTATAAGGAAGATGTTGGTATCATGAAGGATATGAACTTAGATGCATACAGATTTTCCATTTCTTGGTCTAGAATACTCCCAGATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATTAATGAATTGGTGGCAAATGGATTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGTCCTCTCATCATGTGAGTAATACAATTTCAAACTTTCACTTTATAACTTAGTTTAAATACACGTGGAAATGTTTCTCATTCATCTTTATATATCTTCAACTACAGAAAAGACTTTCAAGACTATGCGGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTAAATGAACCATGGACATACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGCTCTTCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCATATTTAGTTGCACATTATCAACTTCTAGCTCATGCAGCAGTGGTTAATTTGTACAAGACCAAATATCAAGTCTCTCAAAAGGGTGTGATAGGTTTAACATTGGTCATAAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAAAGAGCTACAGACTTTATGTTTGGATGGTAAGTTGATTACTAAAATAAAGCTTATATAATCATACACTTATTCCAAATTAACACAAGGAGATATATATATGATAACTTATTCGATTTCATTGTTTAATTATATAGGTTTATGGATCCCTTAGCCAATGGAGATTATCCAAAAAACATGAGAGCCTTAGTAAGAACAAGGTTACCAAAGTTTACAAAAGAGCAATCAAGGCTAGTGAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCATGTTATGCTTCTGATGCACCTCAATTAAGCAATGGCAAACCTAGCTACCTAACAGATTCACTTTCTCGTTTTTCATGTAAGAACATTTTTGGACTACTTTATATCTATTGATTATTAAGTTATATATTATAAATTTAAATTAATGGTGTCCATTTTTTGTGTGTGTGATTGCAGTTGAACGTGATGGAAAAACCATTGGTCTAAATGTAAGTGTTCAACCCTCAAAATTTCTAACAACTTACATGTTATTTGGTTTTGTCTAAATTTGTAATTAATGAATTTGGTTATTTTACTTTCAGGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTGATACAAGTTAAAGAAAAATACAACAACCCTTTGATTTATATTACTGAAAATGGTAAGCAAATCACTTTCATATCATGCTTTTTCTTCTTTAAATAGATAAAGCTATAGTAAAAAACTATTTGAATTAGATATATAAATTTCTGTATGAAAATTTTATTTTATTACTCATGAATATAACTCAACTTTTTCATAATGTGTGTAGGTATTAATGAGTACGATGATCCATCGTTATCGCTTGAAGAATCTCTTATGGATACTTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGTGAGTAAATTTTTGATATATCTAAAGATCAATCTATTTCACTTTCTTTCATGGAATTTAGCTAAATTATTTTCTTTCTTTTAATGTAAATATAGGGCTGGTGTAAATGTGAAGGGATACTTTGCATGGTCTTTGTTAGACAATTTTGAATGGCACAAGGGTTATACTGTGAGATTTGGAATGACCTTTGTAGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACATCAGACAAAAAAGTTTACATAGACTCCATTTAA
Protein sequence

>MS.gene003903.t1

MRYFLFSLLLSIVSTFIITLTEGQEIINTAPVQIGSLNRNDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPEKISDGNNGDVAVDSYHPYKEDVGIMKDMNLDAYRFSISWSRILPDGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVVNLYKTKYQVSQKGVIGLTLVINYFVPLSDNKLDIKAAERATDFMFGWFMDPLANGDYPKNMRALVRTRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSDKKVYIDSI