AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56477

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56477.t1 MTR_4g083000 98.416 505 8 0 1 505 1 505 0.0 1038
MS.gene56477.t1 MTR_4g083000 98.783 411 5 0 95 505 1 411 0.0 850
MS.gene56477.t1 MTR_5g044000 72.361 521 121 3 3 501 1 520 0.0 790
MS.gene56477.t1 MTR_4g081530 60.362 497 195 2 8 502 3 499 0.0 651
MS.gene56477.t1 MTR_6g078450 54.331 508 221 6 3 502 7 511 0.0 560
MS.gene56477.t1 MTR_6g078380 55.644 505 212 7 7 502 11 512 0.0 557
MS.gene56477.t1 MTR_4g066240 53.465 505 226 5 3 502 11 511 0.0 555
MS.gene56477.t1 MTR_4g066240 53.360 506 226 6 3 502 11 512 0.0 550
MS.gene56477.t1 MTR_6g078330 52.663 507 227 4 6 505 15 515 0.0 542
MS.gene56477.t1 MTR_2g098790 51.683 505 233 6 6 502 12 513 0.0 541
MS.gene56477.t1 MTR_2g098520 53.347 478 218 4 28 502 34 509 0.0 538
MS.gene56477.t1 MTR_4g066590 54.298 477 213 3 28 501 33 507 0.0 534
MS.gene56477.t1 MTR_2g098540 52.174 506 233 6 3 502 4 506 0.0 533
MS.gene56477.t1 MTR_4g066580 51.406 498 232 6 11 502 21 514 0.0 532
MS.gene56477.t1 MTR_4g066640 51.953 512 220 8 6 502 12 512 0.0 531
MS.gene56477.t1 MTR_4g066210 54.054 481 212 5 27 502 42 518 0.0 530
MS.gene56477.t1 MTR_3g033810 52.830 477 211 4 27 502 20 483 0.0 525
MS.gene56477.t1 MTR_4g066630 52.893 484 209 4 28 501 39 513 0.0 523
MS.gene56477.t1 MTR_3g028720 51.731 491 227 6 18 502 27 513 0.0 523
MS.gene56477.t1 MTR_0110s0040 51.697 501 235 6 6 505 20 514 0.0 521
MS.gene56477.t1 MTR_5g071520 53.971 491 208 6 26 502 37 523 0.0 520
MS.gene56477.t1 MTR_0110s0030 51.098 501 238 6 6 505 20 514 0.0 518
MS.gene56477.t1 MTR_3g033790 51.572 477 216 4 27 502 18 480 4.49e-180 514
MS.gene56477.t1 MTR_3g026280 49.190 494 236 5 16 501 5 491 1.65e-178 511
MS.gene56477.t1 MTR_2g098540 53.696 460 206 5 47 502 6 462 3.89e-176 503
MS.gene56477.t1 MTR_4g023000 49.304 503 239 8 5 502 2 493 9.08e-176 504
MS.gene56477.t1 MTR_4g066330 49.606 508 214 7 3 502 19 492 1.72e-171 493
MS.gene56477.t1 MTR_3g026400 47.012 502 259 4 7 505 14 511 7.62e-170 489
MS.gene56477.t1 MTR_4g066340 53.670 436 198 3 71 504 7 440 7.92e-169 484
MS.gene56477.t1 MTR_3g026620 47.913 503 254 4 7 505 14 512 6.65e-167 482
MS.gene56477.t1 MTR_6g078450 52.643 454 204 6 3 448 7 457 1.55e-165 476
MS.gene56477.t1 MTR_2g022710 45.562 507 267 4 6 505 7 511 1.91e-165 478
MS.gene56477.t1 MTR_3g026400 48.723 470 234 4 37 505 17 480 8.20e-164 473
MS.gene56477.t1 MTR_4g066280 47.525 505 228 6 5 502 18 492 2.64e-163 472
MS.gene56477.t1 MTR_4g016920 47.799 477 232 5 29 502 28 490 6.89e-162 469
MS.gene56477.t1 MTR_2g079580 47.541 488 250 5 17 501 19 503 1.42e-161 469
MS.gene56477.t1 MTR_7g068910 45.051 495 257 6 10 502 13 494 6.13e-161 467
MS.gene56477.t1 MTR_4g131810 47.669 472 243 4 33 501 33 503 1.60e-159 463
MS.gene56477.t1 MTR_2g079550 47.746 488 249 5 17 501 17 501 1.72e-159 463
MS.gene56477.t1 MTR_5g068740 46.169 509 251 10 3 505 1 492 9.82e-159 461
MS.gene56477.t1 MTR_1g088610 46.185 498 251 6 7 502 6 488 1.52e-158 465
MS.gene56477.t1 MTR_1g088610 41.322 121 64 2 386 505 502 616 3.89e-23 103
MS.gene56477.t1 MTR_4g015420 47.454 491 217 7 25 502 62 524 1.83e-158 461
MS.gene56477.t1 MTR_2g022760 45.977 522 248 9 3 505 7 513 6.75e-158 459
MS.gene56477.t1 MTR_7g068910 44.158 505 257 7 10 502 13 504 7.30e-158 459
MS.gene56477.t1 MTR_6g078330 53.717 417 181 3 95 505 1 411 3.43e-157 453
MS.gene56477.t1 MTR_4g131800 45.898 512 250 7 7 505 495 992 1.46e-156 472
MS.gene56477.t1 MTR_4g066630 50.930 430 192 4 28 447 39 459 1.17e-153 446
MS.gene56477.t1 MTR_3g028720 50.114 437 208 6 18 448 27 459 1.76e-153 446
MS.gene56477.t1 MTR_4g066240 51.807 415 191 5 3 412 11 421 1.98e-152 442
MS.gene56477.t1 MTR_4g015460 46.232 491 222 7 25 502 39 500 2.14e-150 439
MS.gene56477.t1 MTR_4g066580 50.839 417 191 7 11 421 21 429 2.18e-150 437
MS.gene56477.t1 MTR_4g066630 52.911 395 167 4 28 412 39 424 1.69e-148 432
MS.gene56477.t1 MTR_3g028720 52.120 401 182 6 18 412 27 423 1.36e-147 429
MS.gene56477.t1 MTR_2g043200 45.833 480 219 6 33 502 70 518 4.38e-146 429
MS.gene56477.t1 MTR_4g067040 54.497 378 163 5 28 400 34 407 4.77e-145 422
MS.gene56477.t1 MTR_6g078330 51.613 403 185 2 107 505 15 411 2.50e-144 421
MS.gene56477.t1 MTR_2g022710 43.220 472 249 4 6 459 7 477 2.13e-142 418
MS.gene56477.t1 MTR_2g022710 44.444 450 242 3 6 448 7 455 5.47e-142 417
MS.gene56477.t1 MTR_4g067040 59.688 320 126 2 28 344 34 353 1.04e-140 410
MS.gene56477.t1 MTR_6g078330 55.556 342 149 2 6 344 15 356 2.07e-137 402
MS.gene56477.t1 MTR_4g066630 57.188 320 134 2 28 344 39 358 3.68e-136 399
MS.gene56477.t1 MTR_2g022710 45.894 414 216 3 6 412 7 419 4.28e-136 400
MS.gene56477.t1 MTR_7g033860 42.977 477 252 8 30 501 50 511 4.00e-135 401
MS.gene56477.t1 MTR_0110s0040 55.193 337 149 2 6 341 20 355 8.31e-135 396
MS.gene56477.t1 MTR_4g066640 55.072 345 143 6 6 341 12 353 1.00e-134 395
MS.gene56477.t1 MTR_2g022710 46.602 412 217 3 95 505 1 410 1.28e-134 396
MS.gene56477.t1 MTR_3g028720 55.287 331 144 3 18 344 27 357 1.29e-134 395
MS.gene56477.t1 MTR_1g088630 44.035 461 217 8 47 505 14 435 1.95e-134 397
MS.gene56477.t1 MTR_4g016920 47.561 410 198 5 95 501 1 396 6.78e-134 394
MS.gene56477.t1 MTR_7g068900 46.905 420 199 6 90 502 17 419 1.95e-133 395
MS.gene56477.t1 MTR_0108s0030 41.545 479 246 7 26 501 1 448 3.39e-131 389
MS.gene56477.t1 MTR_2g079580 47.619 399 204 4 17 412 19 415 8.98e-130 384
MS.gene56477.t1 MTR_2g022710 45.025 402 213 3 6 400 7 407 8.11e-129 381
MS.gene56477.t1 MTR_2g022760 44.941 425 205 7 95 505 1 410 4.07e-126 374
MS.gene56477.t1 MTR_3g026400 50.147 341 166 3 7 344 14 353 6.83e-126 372
MS.gene56477.t1 MTR_2g022710 48.266 346 171 3 6 344 7 351 3.79e-122 364
MS.gene56477.t1 MTR_7g051510 39.666 479 260 8 29 501 76 531 1.70e-113 346
MS.gene56477.t1 MTR_7g051650 38.574 477 269 7 29 501 76 532 2.30e-112 343
MS.gene56477.t1 MTR_7g051650 38.784 477 264 7 29 501 76 528 2.14e-111 340
MS.gene56477.t1 MTR_7g051610 38.958 480 262 9 29 501 76 531 3.37e-110 337
MS.gene56477.t1 MTR_1g088630 47.633 338 149 5 30 366 29 339 5.81e-108 326
MS.gene56477.t1 MTR_4g016920 56.863 255 110 0 95 349 1 255 9.53e-106 318
MS.gene56477.t1 MTR_1g088630 53.232 263 120 2 30 291 29 289 2.18e-99 302
MS.gene56477.t1 MTR_7g056747 39.905 421 211 8 90 501 10 397 4.38e-98 302
MS.gene56477.t1 MTR_0110s0020 57.965 226 94 1 28 253 43 267 7.34e-92 283
MS.gene56477.t1 MTR_4g122980 26.291 426 235 13 89 505 181 536 1.13e-32 132
MS.gene56477.t1 MTR_8g038650 50.505 99 49 0 251 349 57 155 6.59e-28 109
MS.gene56477.t1 MTR_8g038650 49.057 53 27 0 37 89 7 59 7.12e-12 63.9
MS.gene56477.t1 MTR_5g069350 44.531 128 41 4 385 502 81 188 3.53e-20 88.6
MS.gene56477.t1 MTR_2g022730 38.961 77 45 1 382 456 28 104 9.36e-11 62.0
MS.gene56477.t1 MTR_7g028885 42.857 70 36 1 231 296 21 90 9.90e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56477.t1 AT1G26560 79.876 482 96 1 21 501 25 506 0.0 841
MS.gene56477.t1 AT5G54570 61.587 479 182 2 25 501 27 505 0.0 638
MS.gene56477.t1 AT5G54570 61.647 425 162 1 25 448 27 451 0.0 562
MS.gene56477.t1 AT5G54570 61.029 408 158 1 95 501 1 408 0.0 544
MS.gene56477.t1 AT3G18080 53.138 478 213 5 28 502 39 508 0.0 527
MS.gene56477.t1 AT3G18070 50.947 475 220 5 28 502 30 491 3.47e-177 507
MS.gene56477.t1 AT3G18070 51.158 475 225 5 28 502 30 497 6.52e-177 507
MS.gene56477.t1 AT5G36890 50.737 475 220 5 30 502 18 480 5.29e-173 496
MS.gene56477.t1 AT5G36890 50.737 475 220 5 30 502 18 480 1.10e-172 496
MS.gene56477.t1 AT2G44450 49.689 483 231 6 27 505 30 504 6.91e-171 492
MS.gene56477.t1 AT5G44640 47.961 515 246 9 3 505 1 505 1.09e-170 491
MS.gene56477.t1 AT5G42260 48.521 507 239 9 3 497 1 497 4.89e-169 487
MS.gene56477.t1 AT5G24550 45.809 513 254 6 11 502 1 510 3.23e-167 483
MS.gene56477.t1 AT3G60130 48.554 484 234 6 27 504 29 503 1.96e-166 481
MS.gene56477.t1 AT2G44480 46.926 488 239 5 24 501 31 508 3.46e-166 480
MS.gene56477.t1 AT2G44480 46.926 488 239 5 24 501 62 539 6.48e-166 481
MS.gene56477.t1 AT1G02850 47.708 480 233 7 25 502 23 486 5.91e-164 474
MS.gene56477.t1 AT3G60140 45.857 519 252 8 1 504 1 505 1.07e-163 476
MS.gene56477.t1 AT2G25630 47.233 506 237 7 5 505 7 487 2.56e-162 469
MS.gene56477.t1 AT1G61820 49.471 473 234 5 33 502 35 505 1.14e-161 469
MS.gene56477.t1 AT5G24540 45.681 521 243 9 11 502 1 510 1.34e-159 464
MS.gene56477.t1 AT1G02850 45.527 503 233 8 25 502 23 509 6.67e-159 462
MS.gene56477.t1 AT2G44470 44.841 504 266 6 7 501 5 505 1.63e-158 463
MS.gene56477.t1 AT4G27830 44.356 505 256 7 1 501 1 484 1.15e-157 458
MS.gene56477.t1 AT3G60120 47.401 481 239 6 30 502 16 490 3.25e-157 458
MS.gene56477.t1 AT1G02850 45.437 504 233 9 25 502 23 510 5.34e-157 457
MS.gene56477.t1 AT1G61810 46.457 508 261 7 3 502 4 508 9.10e-156 454
MS.gene56477.t1 AT1G45191 45.059 506 250 7 3 502 1 484 3.31e-154 449
MS.gene56477.t1 AT1G02850 45.833 480 215 8 25 502 23 459 6.13e-154 447
MS.gene56477.t1 AT1G60090 45.291 499 248 9 10 502 4 483 1.23e-153 448
MS.gene56477.t1 AT1G45191 44.841 504 265 5 3 502 1 495 1.57e-153 448
MS.gene56477.t1 AT1G45191 44.531 512 267 5 3 502 1 507 2.62e-153 448
MS.gene56477.t1 AT2G44460 46.575 511 243 8 9 501 6 504 7.27e-153 449
MS.gene56477.t1 AT4G22100 44.578 498 255 8 9 502 3 483 9.00e-153 446
MS.gene56477.t1 AT1G45191 44.862 506 257 7 3 502 1 490 4.13e-152 444
MS.gene56477.t1 AT2G44490 44.177 498 261 10 17 502 1 493 1.51e-151 444
MS.gene56477.t1 AT1G75940 46.600 500 234 9 23 501 30 517 1.55e-150 441
MS.gene56477.t1 AT4G27820 46.218 476 236 5 29 501 24 482 1.17e-149 437
MS.gene56477.t1 AT1G60090 45.238 504 250 9 9 502 3 490 2.27e-149 437
MS.gene56477.t1 AT3G21370 45.040 504 255 10 15 504 19 514 2.92e-149 437
MS.gene56477.t1 AT1G61810 46.356 494 254 7 3 488 4 494 8.05e-149 437
MS.gene56477.t1 AT4G21760 44.468 470 253 4 33 501 59 521 4.96e-147 432
MS.gene56477.t1 AT1G51470 47.193 481 231 11 28 501 45 509 7.09e-146 428
MS.gene56477.t1 AT1G47600 47.193 481 231 11 28 501 45 509 1.08e-145 427
MS.gene56477.t1 AT1G47600 46.764 479 235 9 28 501 45 508 1.79e-145 427
MS.gene56477.t1 AT3G09260 45.155 485 252 7 25 501 32 510 2.66e-145 427
MS.gene56477.t1 AT1G52400 44.402 518 254 11 7 503 13 517 4.19e-145 427
MS.gene56477.t1 AT1G52400 44.402 518 254 11 7 503 13 517 4.19e-145 427
MS.gene56477.t1 AT1G66280 44.597 509 267 10 1 501 9 510 4.67e-145 426
MS.gene56477.t1 AT5G26000 44.204 509 263 8 8 501 9 511 1.44e-143 423
MS.gene56477.t1 AT4G21760 44.468 470 243 7 33 501 59 511 3.40e-142 420
MS.gene56477.t1 AT3G60130 47.733 419 209 4 89 504 40 451 1.41e-140 413
MS.gene56477.t1 AT2G44480 46.394 416 204 4 95 501 1 406 4.59e-140 410
MS.gene56477.t1 AT2G32860 43.967 489 260 7 22 501 88 571 9.41e-139 414
MS.gene56477.t1 AT3G62750 42.308 494 254 7 13 501 6 473 1.32e-138 409
MS.gene56477.t1 AT3G62750 42.308 494 254 7 13 501 32 499 3.37e-138 409
MS.gene56477.t1 AT3G03640 41.255 526 272 12 1 502 1 513 6.48e-138 409
MS.gene56477.t1 AT2G32860 43.232 495 254 8 22 501 88 570 9.85e-138 411
MS.gene56477.t1 AT1G66270 43.750 496 265 9 14 501 21 510 1.20e-137 407
MS.gene56477.t1 AT5G25980 43.243 518 269 11 1 502 15 523 3.85e-137 407
MS.gene56477.t1 AT3G60130 46.778 419 202 5 89 504 40 440 4.42e-137 404
MS.gene56477.t1 AT5G28510 40.918 523 283 9 1 501 1 519 1.60e-135 402
MS.gene56477.t1 AT1G66270 43.548 496 264 11 14 501 21 508 3.37e-134 399
MS.gene56477.t1 AT1G02850 46.602 412 186 6 25 412 23 424 1.85e-132 391
MS.gene56477.t1 AT3G62740 41.474 475 256 7 29 501 24 478 2.83e-131 390
MS.gene56477.t1 AT5G24540 43.656 465 223 8 11 447 1 454 6.80e-131 388
MS.gene56477.t1 AT2G44470 42.316 449 248 5 7 447 5 450 6.23e-128 380
MS.gene56477.t1 AT1G61810 46.585 410 215 4 95 502 1 408 1.76e-127 378
MS.gene56477.t1 AT3G60140 44.218 441 218 7 1 427 1 427 6.19e-127 378
MS.gene56477.t1 AT5G26000 43.833 454 236 6 8 448 9 456 6.90e-127 378
MS.gene56477.t1 AT4G27830 44.039 411 211 5 95 501 1 396 4.41e-126 374
MS.gene56477.t1 AT3G18070 54.140 314 141 2 28 341 30 340 9.34e-126 372
MS.gene56477.t1 AT1G45191 49.857 349 167 3 3 348 1 344 3.19e-122 364
MS.gene56477.t1 AT1G45191 49.857 349 167 3 3 348 1 344 3.20e-122 364
MS.gene56477.t1 AT1G60270 51.818 330 151 4 11 337 5 329 6.37e-122 362
MS.gene56477.t1 AT4G27820 44.634 410 211 4 95 501 1 397 8.07e-121 361
MS.gene56477.t1 AT4G27820 44.634 410 211 4 95 501 1 397 8.07e-121 361
MS.gene56477.t1 AT5G25980 42.857 462 241 9 1 448 15 467 1.10e-120 362
MS.gene56477.t1 AT5G25980 42.857 462 241 9 1 448 15 467 1.10e-120 362
MS.gene56477.t1 AT1G61810 44.737 418 221 6 3 412 4 419 2.50e-119 357
MS.gene56477.t1 AT3G62750 41.855 442 227 6 13 450 32 447 4.15e-119 358
MS.gene56477.t1 AT1G52400 45.176 425 201 9 7 412 13 424 4.78e-119 358
MS.gene56477.t1 AT2G44480 52.215 316 146 4 24 336 62 375 1.25e-118 354
MS.gene56477.t1 AT2G44470 47.368 342 174 3 7 342 5 346 5.07e-116 348
MS.gene56477.t1 AT2G44450 46.389 360 186 3 146 505 1 353 4.65e-115 344
MS.gene56477.t1 AT3G62740 41.905 420 223 6 29 447 24 423 2.30e-114 344
MS.gene56477.t1 AT1G61820 46.027 365 194 3 139 502 4 366 1.75e-113 340
MS.gene56477.t1 AT3G18070 46.409 362 181 5 149 502 64 420 7.61e-110 333
MS.gene56477.t1 AT3G18070 53.226 62 29 0 28 89 30 91 2.76e-16 81.3
MS.gene56477.t1 AT3G62750 47.605 334 160 3 13 344 6 326 1.01e-109 330
MS.gene56477.t1 AT3G62750 47.605 334 160 3 13 344 6 326 1.01e-109 330
MS.gene56477.t1 AT3G62750 41.463 410 215 5 95 501 1 388 2.44e-109 331
MS.gene56477.t1 AT3G62750 41.463 410 215 5 95 501 1 388 2.44e-109 331
MS.gene56477.t1 AT3G62750 47.605 334 160 3 13 344 32 352 7.83e-109 331
MS.gene56477.t1 AT5G48375 41.228 456 190 9 46 490 47 435 4.39e-106 324
MS.gene56477.t1 AT3G18070 48.562 313 156 4 190 502 1 308 3.81e-103 311
MS.gene56477.t1 AT2G44460 44.054 370 183 6 144 501 1 358 8.70e-99 305
MS.gene56477.t1 AT1G60270 53.086 243 113 1 95 337 1 242 2.92e-91 280
MS.gene56477.t1 AT1G61810 47.157 299 149 5 3 294 4 300 5.09e-90 278
MS.gene56477.t1 AT2G44480 41.479 311 165 3 198 501 2 302 2.16e-85 266
MS.gene56477.t1 AT1G51490 41.551 361 183 13 15 368 10 349 5.70e-81 258
MS.gene56477.t1 AT3G18070 43.223 273 145 3 149 413 64 334 1.82e-70 228
MS.gene56477.t1 AT3G18070 53.226 62 29 0 28 89 30 91 1.71e-16 81.3
MS.gene56477.t1 AT3G18070 45.536 224 120 2 190 413 1 222 1.40e-63 207
MS.gene56477.t1 AT5G16580 40.484 289 155 5 171 458 27 299 1.03e-61 204
MS.gene56477.t1 AT3G06510 26.291 426 235 13 89 505 158 513 2.28e-30 125
MS.gene56477.t1 AT3G06510 24.845 483 272 14 50 505 129 547 3.22e-30 125

Find 110 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGATAAATATATTATT+TGG 0.142772 4.4:-30045436 None:intergenic
GAGACGTGCTTTCAGAAATT+TGG 0.149824 4.4:+30043836 MS.gene56477:CDS
TTTCCACATGGCTTTATATT+TGG 0.156659 4.4:+30040223 MS.gene56477:CDS
CTTGGTCACTGCTGGATAAT+TGG 0.194628 4.4:+30045659 MS.gene56477:CDS
TATATATCTTAACAACTATT+TGG 0.197130 4.4:-30045797 None:intergenic
AACCATTGAACAGATTGTTT+TGG 0.260738 4.4:-30045754 None:intergenic
GTCCTTCAAAGCATCCTTCT+TGG 0.263687 4.4:-30045455 None:intergenic
AACTACATCAAACAAAAGTA+TGG 0.263885 4.4:+30045056 MS.gene56477:CDS
CCGCAGTAGCAGATATTTAT+AGG 0.265098 4.4:+30044035 MS.gene56477:CDS
TTGTTTGATGTAGTTCATTA+AGG 0.277161 4.4:-30045048 None:intergenic
AGACGTGCTTTCAGAAATTT+GGG 0.280443 4.4:+30043837 MS.gene56477:CDS
TCTGAGGCTGCTCTTGTTAA+GGG 0.291231 4.4:+30044587 MS.gene56477:CDS
ATCTGAGGCTGCTCTTGTTA+AGG 0.301566 4.4:+30044586 MS.gene56477:CDS
TGAGAAGCAGAGTAGGAAAT+AGG 0.324485 4.4:+30044546 MS.gene56477:CDS
CACGATTCTATTGCAGATTC+CGG 0.328206 4.4:+30044692 MS.gene56477:CDS
CCTGTCTTTATCACTGAAAA+TGG 0.333355 4.4:+30045086 MS.gene56477:CDS
ACTTGCAGGCAAATTCTATA+TGG 0.347077 4.4:+30044997 MS.gene56477:intron
GCTGGATACTCTTCTAGATT+TGG 0.353693 4.4:+30045691 MS.gene56477:CDS
AGTTCCCTGCTCTACAAAAT+AGG 0.355332 4.4:-30043964 None:intergenic
TAAACTCATCAACGCATTAC+TGG 0.365017 4.4:+30043461 MS.gene56477:CDS
GCTTATCGGTGGAGATTAGT+AGG 0.371109 4.4:+30040194 MS.gene56477:CDS
TTGGTCACTGCTGGATAATT+GGG 0.380394 4.4:+30045660 MS.gene56477:CDS
AGCCTTGGAAGACAAGTATT+CGG 0.389344 4.4:+30043678 MS.gene56477:CDS
CTCCAAGAAGGATGCTTTGA+AGG 0.403006 4.4:+30045453 MS.gene56477:CDS
TTTCTTGATCCTTTGATGTT+CGG 0.411130 4.4:+30044506 MS.gene56477:CDS
AATGTCTTCTTTAGTGTTTG+TGG 0.416999 4.4:-30044299 None:intergenic
ACTTGGGGATGGATGCCTAT+AGG 0.418759 4.4:+30043216 MS.gene56477:CDS
ATTAAGGTTCTCATACTTTG+TGG 0.424433 4.4:-30045032 None:intergenic
TATCTTAACAACTATTTGGC+TGG 0.429535 4.4:-30045793 None:intergenic
ACAAAATAGGTGAAGGAGAA+TGG 0.433243 4.4:-30043951 None:intergenic
GCCTTGGAAGACAAGTATTC+GGG 0.436562 4.4:+30043679 MS.gene56477:CDS
GATAATTGGGAGTGGGCAGC+TGG 0.440874 4.4:+30045673 MS.gene56477:CDS
GCTTTCAGAAATTTGGGGAT+AGG 0.447429 4.4:+30043843 MS.gene56477:CDS
AGAGATTCAGATATGCTTAT+CGG 0.449342 4.4:+30040180 MS.gene56477:CDS
CGGCTATTTATCTTATCTAC+AGG 0.450463 4.4:+30045501 MS.gene56477:CDS
AACAACTCTACTAATTTGAT+AGG 0.451319 4.4:+30044659 MS.gene56477:CDS
CTTTCAGAAATTTGGGGATA+GGG 0.453221 4.4:+30043844 MS.gene56477:CDS
TACTAAAGCTATTGCAGAAA+GGG 0.453822 4.4:+30044844 MS.gene56477:CDS
TTTCATGTGTTAGATGGATC+TGG 0.460074 4.4:+30043405 MS.gene56477:intron
ATGCTTTGAAGGACGAGAAA+CGG 0.460204 4.4:+30045464 MS.gene56477:CDS
GAAGGAGCAGTGAAAGAAGA+TGG 0.463687 4.4:+30042655 MS.gene56477:CDS
TCTTCTTTAGTGTTTGTGGC+AGG 0.467081 4.4:-30044295 None:intergenic
TGGATCTGGCGCAATCAATC+AGG 0.471266 4.4:+30043419 MS.gene56477:CDS
CCAAGAGATGGAAAACCTAT+AGG 0.472958 4.4:-30043231 None:intergenic
AGGAGAATGGAGCACCGTCC+AGG 0.476397 4.4:-30043938 None:intergenic
AATACACAAGGTGGATCACT+TGG 0.483955 4.4:+30044244 MS.gene56477:CDS
ATTAATTACTTACTTCGTAT+CGG 0.488535 4.4:-30042851 None:intergenic
ACATTGTGAGCAACAATGTA+AGG 0.500391 4.4:-30043998 None:intergenic
CTTATGTGACACTCTACCAT+TGG 0.506460 4.4:+30043644 MS.gene56477:CDS
TTATGTGACACTCTACCATT+GGG 0.511020 4.4:+30043645 MS.gene56477:CDS
CATACAACTCATGAAGGACT+TGG 0.512565 4.4:+30043199 MS.gene56477:CDS
ACCCAAAACAATCTGTTCAA+TGG 0.513350 4.4:+30045752 MS.gene56477:CDS
GAGCAGTGAAAGAAGATGGA+AGG 0.514422 4.4:+30042659 MS.gene56477:CDS
AGCAGTGAAAGAAGATGGAA+GGG 0.526375 4.4:+30042660 MS.gene56477:CDS
CAATGGTAGAGTGTCACATA+AGG 0.528538 4.4:-30043643 None:intergenic
GCCTCAGATGGAGAAAACTT+TGG 0.528984 4.4:-30044572 None:intergenic
GTACTAAAGCTATTGCAGAA+AGG 0.533800 4.4:+30044843 MS.gene56477:CDS
CCTATAAATATCTGCTACTG+CGG 0.538257 4.4:-30044035 None:intergenic
ATACAACTCATGAAGGACTT+GGG 0.538859 4.4:+30043200 MS.gene56477:CDS
CACTGCTGGATAATTGGGAG+TGG 0.539509 4.4:+30045665 MS.gene56477:CDS
TTAACAAGAGCAGCCTCAGA+TGG 0.543981 4.4:-30044584 None:intergenic
TTGGGGATAGGGTGAAGCAC+TGG 0.545276 4.4:+30043855 MS.gene56477:CDS
TTGGGACCTACCTCAAGCCT+TGG 0.546271 4.4:+30043663 MS.gene56477:CDS
CCACATACATTTACCACACA+AGG 0.547054 4.4:+30043893 MS.gene56477:CDS
TCCCGAATACTTGTCTTCCA+AGG 0.554727 4.4:-30043680 None:intergenic
TAATATATTTATCTCCAAGA+AGG 0.567641 4.4:+30045441 MS.gene56477:CDS
ACTAACCTGAAAAGCTGAAG+AGG 0.570877 4.4:-30040251 None:intergenic
AGGCTTGAGGTAGGTCCCAA+TGG 0.572464 4.4:-30043660 None:intergenic
TGTCTTCCAAGGCTTGAGGT+AGG 0.574426 4.4:-30043669 None:intergenic
AGTTCAATGAGAAGCAGAGT+AGG 0.575461 4.4:+30044539 MS.gene56477:CDS
GGATAATCTCCGAACATCAA+AGG 0.578234 4.4:-30044515 None:intergenic
GGAAGACATACAACTCATGA+AGG 0.585736 4.4:+30043193 MS.gene56477:intron
AGAGATGGTTGCAATGTGAA+AGG 0.586104 4.4:+30045628 MS.gene56477:intron
CTGCTCTACAAAATAGGTGA+AGG 0.586299 4.4:-30043958 None:intergenic
TACTTGTCTTCCAAGGCTTG+AGG 0.588350 4.4:-30043673 None:intergenic
ACCACACAAGGGTATGATGT+CGG 0.588725 4.4:+30043905 MS.gene56477:CDS
ACTACATCAAACAAAAGTAT+GGG 0.591147 4.4:+30045057 MS.gene56477:CDS
ATAAATTCGAGACCAAGAGA+TGG 0.596482 4.4:-30043243 None:intergenic
TGAACTTGTGTCTAGTATGA+AGG 0.597848 4.4:+30042637 MS.gene56477:intron
CTACTGCGGCATGAGTAAGT+AGG 0.604480 4.4:-30044021 None:intergenic
TTTCAGTGATAAAGACAGGA+GGG 0.605797 4.4:-30045082 None:intergenic
TCTGGCGCAATCAATCAGGC+AGG 0.609823 4.4:+30043423 MS.gene56477:CDS
CCTTGTGTGGTAAATGTATG+TGG 0.610608 4.4:-30043893 None:intergenic
TACAACTCATGAAGGACTTG+GGG 0.612010 4.4:+30043201 MS.gene56477:CDS
ACTGCTGGATAATTGGGAGT+GGG 0.612645 4.4:+30045666 MS.gene56477:CDS
CTTATCGGTGGAGATTAGTA+GGG 0.615161 4.4:+30040195 MS.gene56477:CDS
ACTCATGAAGGACTTGGGGA+TGG 0.623572 4.4:+30043205 MS.gene56477:CDS
AATTACTTACTTCGTATCGG+TGG 0.624273 4.4:-30042848 None:intergenic
GAAAATGTATCCCACACAGA+TGG 0.629244 4.4:-30042685 None:intergenic
GATTCAGATATGCTTATCGG+TGG 0.633940 4.4:+30040183 MS.gene56477:CDS
TGGAAGGGGACCATCTGTGT+GGG 0.637310 4.4:+30042675 MS.gene56477:CDS
ACCGACATCATACCCTTGTG+TGG 0.637494 4.4:-30043906 None:intergenic
ACTCTGCTTCTCATTGAACT+CGG 0.642142 4.4:-30044536 None:intergenic
GCAGTGAAAGAAGATGGAAG+GGG 0.642458 4.4:+30042661 MS.gene56477:CDS
GTTGTTTCTTGCATAAAATG+TGG 0.649153 4.4:-30044642 None:intergenic
GATGTCGGTTTACAAGCACC+TGG 0.652148 4.4:+30043920 MS.gene56477:CDS
CGGAATCTGCAATAGAATCG+TGG 0.654104 4.4:-30044691 None:intergenic
TCGGTTTACAAGCACCTGGA+CGG 0.660277 4.4:+30043924 MS.gene56477:CDS
ATGGAAGGGGACCATCTGTG+TGG 0.660694 4.4:+30042674 MS.gene56477:CDS
CATACGAAGAGTAATAGCAC+CGG 0.661237 4.4:-30044711 None:intergenic
TGGAAGACAAGTATTCGGGA+TGG 0.666025 4.4:+30043683 MS.gene56477:CDS
ATCAACGCATTACTGGCGAA+AGG 0.677548 4.4:+30043468 MS.gene56477:CDS
ATACACAAGGTGGATCACTT+GGG 0.684519 4.4:+30044245 MS.gene56477:CDS
AACAATGTAAGGTTCAGTAG+CGG 0.684922 4.4:-30043987 None:intergenic
ATTCGACAGAATACACAAGG+TGG 0.702392 4.4:+30044235 MS.gene56477:intron
GTGCCAAATATAAAGCCATG+TGG 0.705145 4.4:-30040226 None:intergenic
CACATACATTTACCACACAA+GGG 0.709468 4.4:+30043894 MS.gene56477:CDS
GACGTGCTTTCAGAAATTTG+GGG 0.711204 4.4:+30043838 MS.gene56477:CDS
GTTATTCGACAGAATACACA+AGG 0.717475 4.4:+30044232 MS.gene56477:intron
AAACGGATTAGATACTTCAG+CGG 0.725320 4.4:+30045481 MS.gene56477:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAATTATAAAATA+AGG - chr4.4:30041966-30041985 None:intergenic 0.0%
!! TAAAAAAAATTATAAAATAA+GGG - chr4.4:30041965-30041984 None:intergenic 0.0%
!! ATCTTAAAATTAATTAATGA+TGG - chr4.4:30041654-30041673 None:intergenic 10.0%
!! ATTAAATCATAAATGATTAA+AGG - chr4.4:30042049-30042068 None:intergenic 10.0%
!! ATTCTCAATAAAAAAATTAA+TGG - chr4.4:30040707-30040726 None:intergenic 10.0%
!! TCATTTAATAATTTAATGAT+AGG - chr4.4:30041625-30041644 None:intergenic 10.0%
!! TTAAATCATAAATGATTAAA+GGG - chr4.4:30042048-30042067 None:intergenic 10.0%
!!! AACTTTTAATAAATAATTGT+TGG - chr4.4:30041854-30041873 None:intergenic 10.0%
!!! AGTATATTTTTTTTCATATT+CGG - chr4.4:30043771-30043790 None:intergenic 10.0%
!! ACCATCATTTATTATTATTT+GGG + chr4.4:30041763-30041782 MS.gene56477:intron 15.0%
!! ACCTTTATAGAAAATATATA+AGG - chr4.4:30041086-30041105 None:intergenic 15.0%
!! ACTATTACTAATAGTATTAT+AGG - chr4.4:30042293-30042312 None:intergenic 15.0%
!! ATTATTAATTAATAAGAGAG+AGG - chr4.4:30040660-30040679 None:intergenic 15.0%
!! CCTTTATAGAAAATATATAA+GGG - chr4.4:30041085-30041104 None:intergenic 15.0%
!! CTATTACTAATAGTATTATA+GGG - chr4.4:30042292-30042311 None:intergenic 15.0%
!! TAAAATTAATTAATGATGGT+GGG - chr4.4:30041650-30041669 None:intergenic 15.0%
!! TACCATCATTTATTATTATT+TGG + chr4.4:30041762-30041781 MS.gene56477:intron 15.0%
!! TTAAAATTAATTAATGATGG+TGG - chr4.4:30041651-30041670 None:intergenic 15.0%
!! TTGGAGATAAATATATTATT+TGG - chr4.4:30045439-30045458 None:intergenic 15.0%
!!! AAATTAATGAACTATTGATT+TGG + chr4.4:30045597-30045616 MS.gene56477:intron 15.0%
!!! AATTTATTGACTTCAAATTT+TGG - chr4.4:30045582-30045601 None:intergenic 15.0%
!!! ACTTCATTTATTTTACTAAA+TGG - chr4.4:30041468-30041487 None:intergenic 15.0%
!!! ATTGAAATTTTTGTTTATAC+AGG + chr4.4:30043172-30043191 MS.gene56477:intron 15.0%
!!! TAAGCAAAAATTAACTTTTT+AGG + chr4.4:30041203-30041222 MS.gene56477:intron 15.0%
!!! TATTTATAGGAAAAAGTATA+AGG + chr4.4:30044048-30044067 MS.gene56477:CDS 15.0%
!! AAGTACAATGTATCATTTAT+TGG - chr4.4:30042122-30042141 None:intergenic 20.0%
!! ACCCAAATAATAATAAATGA+TGG - chr4.4:30041767-30041786 None:intergenic 20.0%
!! ACTACTTACATTTGAAAATA+AGG + chr4.4:30044430-30044449 MS.gene56477:intron 20.0%
!! ATCTCTACTGTAAATAATAT+AGG + chr4.4:30042082-30042101 MS.gene56477:intron 20.0%
!! ATTAATTACTTACTTCGTAT+CGG - chr4.4:30042854-30042873 None:intergenic 20.0%
!! GAAATTGAGAAAAGTTTAAA+TGG + chr4.4:30041705-30041724 MS.gene56477:intron 20.0%
!! TAATATATTTATCTCCAAGA+AGG + chr4.4:30045441-30045460 MS.gene56477:CDS 20.0%
!! TCTCTACTGTAAATAATATA+GGG + chr4.4:30042083-30042102 MS.gene56477:intron 20.0%
!! TTAAATTGTTTATCCAAACA+TGG - chr4.4:30042923-30042942 None:intergenic 20.0%
!!! AAAAGTATAAGGTAAAGTTA+TGG + chr4.4:30044059-30044078 MS.gene56477:intron 20.0%
!!! ATATTTATCTAAAATGAGAG+TGG - chr4.4:30040300-30040319 None:intergenic 20.0%
!!! ATTTATTTTACTAAATGGAG+AGG - chr4.4:30041463-30041482 None:intergenic 20.0%
!!! CCCTTATATATTTTCTATAA+AGG + chr4.4:30041082-30041101 MS.gene56477:intron 20.0%
!!! CTTATAATATTCTAAAATGC+TGG + chr4.4:30042745-30042764 MS.gene56477:intron 20.0%
!!! TAAGCAAAACACAATTTTTT+AGG - chr4.4:30041292-30041311 None:intergenic 20.0%
!!! TACTTGACTTTCTTTTAAAA+AGG + chr4.4:30042551-30042570 MS.gene56477:intron 20.0%
!!! TATTTATCTAAAATGAGAGT+GGG - chr4.4:30040299-30040318 None:intergenic 20.0%
! AAAAAATTGCTAGCTAAATC+TGG + chr4.4:30045383-30045402 MS.gene56477:intron 25.0%
! AACAACTCTACTAATTTGAT+AGG + chr4.4:30044659-30044678 MS.gene56477:CDS 25.0%
! AACTACATCAAACAAAAGTA+TGG + chr4.4:30045056-30045075 MS.gene56477:CDS 25.0%
! AGTTAAGGAGACTAATATAA+GGG - chr4.4:30040863-30040882 None:intergenic 25.0%
! ATCTTACAAGTTTACTTACT+TGG + chr4.4:30042211-30042230 MS.gene56477:intron 25.0%
! GAGACATATGAATATTATTG+CGG + chr4.4:30044104-30044123 MS.gene56477:intron 25.0%
! GAGTAAAATAGAAGCAAAAA+TGG + chr4.4:30042327-30042346 MS.gene56477:intron 25.0%
! TAAACATTTCATGTGTTAGA+TGG + chr4.4:30043399-30043418 MS.gene56477:intron 25.0%
! TACTTTGGCCTAAATTTAAA+AGG - chr4.4:30040769-30040788 None:intergenic 25.0%
! TAGTTAAGGAGACTAATATA+AGG - chr4.4:30040864-30040883 None:intergenic 25.0%
! TATGTCTTTATCTCTTGAAA+TGG + chr4.4:30041983-30042002 MS.gene56477:intron 25.0%
! TCTAACACATGAAATGTTTA+TGG - chr4.4:30043399-30043418 None:intergenic 25.0%
! TCTCGGCTTATAAAAATAAA+TGG + chr4.4:30041557-30041576 MS.gene56477:intron 25.0%
! TGTAACAAATTACAAATGTG+AGG - chr4.4:30042781-30042800 None:intergenic 25.0%
! TTAAAGTAGCAACTTTGATT+TGG - chr4.4:30041904-30041923 None:intergenic 25.0%
! TTAACTTCAAAATTAGTCCT+TGG + chr4.4:30043293-30043312 MS.gene56477:intron 25.0%
! TTCAATTCCTACAAATGTAA+TGG - chr4.4:30043623-30043642 None:intergenic 25.0%
! TTGTTAAATGTCTTAATCAC+AGG + chr4.4:30044483-30044502 MS.gene56477:intron 25.0%
! TTGTTTGATGTAGTTCATTA+AGG - chr4.4:30045051-30045070 None:intergenic 25.0%
!! ACTACATCAAACAAAAGTAT+GGG + chr4.4:30045057-30045076 MS.gene56477:CDS 25.0%
!! ACTCTTGTCCTTTTAAATTT+AGG + chr4.4:30040758-30040777 MS.gene56477:intron 25.0%
!! ATATGATTTTCTTACTTCCT+GGG + chr4.4:30040474-30040493 MS.gene56477:intron 25.0%
!! GATACATTTTCTCATACTTT+TGG + chr4.4:30042697-30042716 MS.gene56477:CDS 25.0%
!! GTTTTGCTTATAAATGTGAT+CGG + chr4.4:30041302-30041321 MS.gene56477:intron 25.0%
!! TATATGATTTTCTTACTTCC+TGG + chr4.4:30040473-30040492 MS.gene56477:intron 25.0%
!! TGTGTCTATCTCTTTTATAA+TGG - chr4.4:30041585-30041604 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr4.4:30041193-30041212 None:intergenic 25.0%
!! TTTTTGCTTCTATTTTACTC+CGG - chr4.4:30042327-30042346 None:intergenic 25.0%
!!! ATTTATTTTTATAAGCCGAG+AGG - chr4.4:30041558-30041577 None:intergenic 25.0%
!!! TCACATTTGTAATTTGTTAC+AGG + chr4.4:30042780-30042799 MS.gene56477:intron 25.0%
AAGAGATAGACACACAAAAT+AGG + chr4.4:30041591-30041610 MS.gene56477:intron 30.0%
AATGTCTTCTTTAGTGTTTG+TGG - chr4.4:30044302-30044321 None:intergenic 30.0%
AGAGATTCAGATATGCTTAT+CGG + chr4.4:30040180-30040199 MS.gene56477:CDS 30.0%
AGTAAAACGACAGATTAAGT+TGG - chr4.4:30040634-30040653 None:intergenic 30.0%
AGTCGGCACAAAAATTTAAA+AGG + chr4.4:30040823-30040842 MS.gene56477:intron 30.0%
ATAATACGCTTAATCGAGTA+GGG + chr4.4:30041435-30041454 MS.gene56477:intron 30.0%
ATCAGATGTAACAATTACAC+AGG - chr4.4:30043508-30043527 None:intergenic 30.0%
ATCTCTTGAAATGGTAGAAA+TGG + chr4.4:30041992-30042011 MS.gene56477:intron 30.0%
ATCTGCTAACATTAGTATTC+CGG + chr4.4:30040800-30040819 MS.gene56477:intron 30.0%
ATGAGATGAAAAAACAACAC+AGG + chr4.4:30040524-30040543 MS.gene56477:intron 30.0%
ATGTGTTCTATTGCAAATTG+TGG - chr4.4:30045307-30045326 None:intergenic 30.0%
ATTAAGGTTCTCATACTTTG+TGG - chr4.4:30045035-30045054 None:intergenic 30.0%
CATTGAATGCTGAAAAAGAA+GGG - chr4.4:30044823-30044842 None:intergenic 30.0%
CTAGTAATTGCTTTAACGAT+TGG + chr4.4:30043126-30043145 MS.gene56477:intron 30.0%
CTCAAATGAAATTCAGTCAA+TGG + chr4.4:30044941-30044960 MS.gene56477:intron 30.0%
GATGTGAAAATTTCAATCTG+AGG - chr4.4:30044384-30044403 None:intergenic 30.0%
GTAAACTGAAACTGTGTTTA+TGG - chr4.4:30043346-30043365 None:intergenic 30.0%
GTAATAGTCTATTACTACTC+CGG + chr4.4:30042305-30042324 MS.gene56477:intron 30.0%
TACTAAAGCTATTGCAGAAA+GGG + chr4.4:30044844-30044863 MS.gene56477:CDS 30.0%
TATAATACGCTTAATCGAGT+AGG + chr4.4:30041434-30041453 MS.gene56477:intron 30.0%
TATATTACAAATACTCCCTC+CGG + chr4.4:30041171-30041190 MS.gene56477:intron 30.0%
TCAGATGTAACAATTACACA+GGG - chr4.4:30043507-30043526 None:intergenic 30.0%
TCTTGATCCATTACATTTGT+AGG + chr4.4:30043613-30043632 MS.gene56477:intron 30.0%
TTCAGTTTATAGATGCAAGA+TGG - chr4.4:30045144-30045163 None:intergenic 30.0%
TTTCTTGATCCTTTGATGTT+CGG + chr4.4:30044506-30044525 MS.gene56477:CDS 30.0%
! AACCATTGAACAGATTGTTT+TGG - chr4.4:30045757-30045776 None:intergenic 30.0%
! AAGGGTTCATTAGATTTTGT+GGG + chr4.4:30044605-30044624 MS.gene56477:CDS 30.0%
! ACCATTGAACAGATTGTTTT+GGG - chr4.4:30045756-30045775 None:intergenic 30.0%
! ACTTAGTAGTTCTGTTTATG+TGG - chr4.4:30044913-30044932 None:intergenic 30.0%
! ATGTGAAAGGATATTTTGCT+TGG + chr4.4:30045641-30045660 MS.gene56477:CDS 30.0%
! ATTTTGTGCTTTCTTAACCA+GGG - chr4.4:30040930-30040949 None:intergenic 30.0%
! GGATAGCTTTTGATGTAATT+TGG + chr4.4:30044266-30044285 MS.gene56477:CDS 30.0%
! TAAGGGTTCATTAGATTTTG+TGG + chr4.4:30044604-30044623 MS.gene56477:CDS 30.0%
! TATTTCTGTACTGTCCTAAT+TGG + chr4.4:30042256-30042275 MS.gene56477:intron 30.0%
! TATTTTGTGCTTTCTTAACC+AGG - chr4.4:30040931-30040950 None:intergenic 30.0%
! TTACATGCACTTTCATTTTG+TGG - chr4.4:30045358-30045377 None:intergenic 30.0%
! TTTGCATTTTAGACCATGTT+TGG + chr4.4:30042907-30042926 MS.gene56477:intron 30.0%
!! GTTGTTTCTTGCATAAAATG+TGG - chr4.4:30044645-30044664 None:intergenic 30.0%
!! TTAAGTTGGTTAGTAGAACT+AGG - chr4.4:30040620-30040639 None:intergenic 30.0%
!! TTGACTTCAAATTTTGGTCA+TGG - chr4.4:30045576-30045595 None:intergenic 30.0%
!! TTTCCACATGGCTTTATATT+TGG + chr4.4:30040223-30040242 MS.gene56477:CDS 30.0%
!! TTTGTAATTTGTTACAGGCA+AGG + chr4.4:30042785-30042804 MS.gene56477:intron 30.0%
!!! ATGCGTTGTAGTATTTTTTC+AGG + chr4.4:30045210-30045229 MS.gene56477:intron 30.0%
!!! TGCGTTGTAGTATTTTTTCA+GGG + chr4.4:30045211-30045230 MS.gene56477:intron 30.0%
AACAATGTAAGGTTCAGTAG+CGG - chr4.4:30043990-30044009 None:intergenic 35.0%
AATTACTTACTTCGTATCGG+TGG - chr4.4:30042851-30042870 None:intergenic 35.0%
AATTGCTAGCTAAATCTGGT+TGG + chr4.4:30045387-30045406 MS.gene56477:intron 35.0%
ACAAAATAGGTGAAGGAGAA+TGG - chr4.4:30043954-30043973 None:intergenic 35.0%
ACATTGTGAGCAACAATGTA+AGG - chr4.4:30044001-30044020 None:intergenic 35.0%
ACCCAAAACAATCTGTTCAA+TGG + chr4.4:30045752-30045771 MS.gene56477:CDS 35.0%
ACTTGCAGGCAAATTCTATA+TGG + chr4.4:30044997-30045016 MS.gene56477:intron 35.0%
AGACGTGCTTTCAGAAATTT+GGG + chr4.4:30043837-30043856 MS.gene56477:CDS 35.0%
AGATAGACACACAAAATAGG+TGG + chr4.4:30041594-30041613 MS.gene56477:intron 35.0%
AGATGAAAAAACAACACAGG+TGG + chr4.4:30040527-30040546 MS.gene56477:intron 35.0%
ATAAATTCGAGACCAAGAGA+TGG - chr4.4:30043246-30043265 None:intergenic 35.0%
ATACAACTCATGAAGGACTT+GGG + chr4.4:30043200-30043219 MS.gene56477:CDS 35.0%
ATCTCAACTCACTTAATGGT+AGG - chr4.4:30041535-30041554 None:intergenic 35.0%
ATGCAAAAACTATGCTGCTA+AGG - chr4.4:30045281-30045300 None:intergenic 35.0%
ATGGTAAGAGACCTACTTAA+TGG - chr4.4:30041748-30041767 None:intergenic 35.0%
CACATACATTTACCACACAA+GGG + chr4.4:30043894-30043913 MS.gene56477:CDS 35.0%
CCATTGAATGCTGAAAAAGA+AGG - chr4.4:30044824-30044843 None:intergenic 35.0%
CCTACAAGTAGTATGTAAGT+AGG + chr4.4:30043060-30043079 MS.gene56477:intron 35.0%
CCTACTTACATACTACTTGT+AGG - chr4.4:30043063-30043082 None:intergenic 35.0%
CCTATAAATATCTGCTACTG+CGG - chr4.4:30044038-30044057 None:intergenic 35.0%
CCTGTCTTTATCACTGAAAA+TGG + chr4.4:30045086-30045105 MS.gene56477:CDS 35.0%
CGGCTATTTATCTTATCTAC+AGG + chr4.4:30045501-30045520 MS.gene56477:CDS 35.0%
CTTTCAGAAATTTGGGGATA+GGG + chr4.4:30043844-30043863 MS.gene56477:CDS 35.0%
GAAGGGAAGTAATAACTTAG+TGG - chr4.4:30044806-30044825 None:intergenic 35.0%
GAAGTAATAACTTAGTGGCA+AGG - chr4.4:30044801-30044820 None:intergenic 35.0%
GATTTGGCTAATTACAGAGA+TGG + chr4.4:30045613-30045632 MS.gene56477:intron 35.0%
GGAATACTAATGTTAGCAGA+TGG - chr4.4:30040801-30040820 None:intergenic 35.0%
GGTGAAGATCACAAATAAAG+AGG + chr4.4:30042013-30042032 MS.gene56477:intron 35.0%
GTACTAAAGCTATTGCAGAA+AGG + chr4.4:30044843-30044862 MS.gene56477:CDS 35.0%
GTTATTCGACAGAATACACA+AGG + chr4.4:30044232-30044251 MS.gene56477:intron 35.0%
TAAACTCATCAACGCATTAC+TGG + chr4.4:30043461-30043480 MS.gene56477:CDS 35.0%
TAACATTAGTATTCCGGAGT+CGG + chr4.4:30040806-30040825 MS.gene56477:intron 35.0%
TATAGAATTTGCCTGCAAGT+CGG - chr4.4:30044997-30045016 None:intergenic 35.0%
TATCCTAACTCCCATTAAGT+AGG + chr4.4:30041734-30041753 MS.gene56477:intron 35.0%
TGAACTTGTGTCTAGTATGA+AGG + chr4.4:30042637-30042656 MS.gene56477:intron 35.0%
TGGTAAGAGACCTACTTAAT+GGG - chr4.4:30041747-30041766 None:intergenic 35.0%
TGTTCCATTGCATTCTTAAC+AGG - chr4.4:30044148-30044167 None:intergenic 35.0%
TTACATACTACTTGTAGGAC+TGG - chr4.4:30043058-30043077 None:intergenic 35.0%
TTATGTGACACTCTACCATT+GGG + chr4.4:30043645-30043664 MS.gene56477:CDS 35.0%
TTGCTTATAAATGTGATCGG+AGG + chr4.4:30041305-30041324 MS.gene56477:intron 35.0%
TTTCAGTGATAAAGACAGGA+GGG - chr4.4:30045085-30045104 None:intergenic 35.0%
TTTCATGTGTTAGATGGATC+TGG + chr4.4:30043405-30043424 MS.gene56477:intron 35.0%
! AGATGGAGTATCAACTACTT+TGG - chr4.4:30040784-30040803 None:intergenic 35.0%
! CCATTTTCAGTGATAAAGAC+AGG - chr4.4:30045089-30045108 None:intergenic 35.0%
! CTGTACAAAGCATTAAACCA+AGG - chr4.4:30043313-30043332 None:intergenic 35.0%
! GTATTTTGCTTCAATGCACA+TGG + chr4.4:30044185-30044204 MS.gene56477:intron 35.0%
! TTCACCTATTTTGTAGAGCA+GGG + chr4.4:30043960-30043979 MS.gene56477:CDS 35.0%
! TTCATTTTGTGGTTGTTGCT+TGG - chr4.4:30045347-30045366 None:intergenic 35.0%
! TTGCTTTAACGATTGGTCAA+AGG + chr4.4:30043133-30043152 MS.gene56477:intron 35.0%
! TTTTCAGTGATAAAGACAGG+AGG - chr4.4:30045086-30045105 None:intergenic 35.0%
!! AAACGGATTAGATACTTCAG+CGG + chr4.4:30045481-30045500 MS.gene56477:CDS 35.0%
!! AGTTGTTTTCGTAGCTATTC+TGG + chr4.4:30042975-30042994 MS.gene56477:intron 35.0%
!! TCATTTTGTGGTTGTTGCTT+GGG - chr4.4:30045346-30045365 None:intergenic 35.0%
!! TTCAGGTTAGTCTCATTTCA+TGG + chr4.4:30040263-30040282 MS.gene56477:intron 35.0%
!!! CCTTCTTTTTCAGCATTCAA+TGG + chr4.4:30044821-30044840 MS.gene56477:intron 35.0%
!!! TTAAATTTTTGTGCCGACTC+CGG - chr4.4:30040822-30040841 None:intergenic 35.0%
AAGTTGCAAAGTCCTTTCTG+TGG - chr4.4:30043811-30043830 None:intergenic 40.0%
AATACACAAGGTGGATCACT+TGG + chr4.4:30044244-30044263 MS.gene56477:CDS 40.0%
ACTAACCTGAAAAGCTGAAG+AGG - chr4.4:30040254-30040273 None:intergenic 40.0%
ACTCTGCTTCTCATTGAACT+CGG - chr4.4:30044539-30044558 None:intergenic 40.0%
AGACCTACTTAATGGGAGTT+AGG - chr4.4:30041740-30041759 None:intergenic 40.0%
AGAGATGGTTGCAATGTGAA+AGG + chr4.4:30045628-30045647 MS.gene56477:intron 40.0%
AGCAGTGAAAGAAGATGGAA+GGG + chr4.4:30042660-30042679 MS.gene56477:CDS 40.0%
AGCCTTGGAAGACAAGTATT+CGG + chr4.4:30043678-30043697 MS.gene56477:CDS 40.0%
AGGGATAAGTAGAGCCAATT+AGG - chr4.4:30042273-30042292 None:intergenic 40.0%
AGTTCAATGAGAAGCAGAGT+AGG + chr4.4:30044539-30044558 MS.gene56477:CDS 40.0%
AGTTCCCTGCTCTACAAAAT+AGG - chr4.4:30043967-30043986 None:intergenic 40.0%
ATACACAAGGTGGATCACTT+GGG + chr4.4:30044245-30044264 MS.gene56477:CDS 40.0%
ATTCGACAGAATACACAAGG+TGG + chr4.4:30044235-30044254 MS.gene56477:intron 40.0%
CACGATTCTATTGCAGATTC+CGG + chr4.4:30044692-30044711 MS.gene56477:CDS 40.0%
CATACAACTCATGAAGGACT+TGG + chr4.4:30043199-30043218 MS.gene56477:CDS 40.0%
CATACGAAGAGTAATAGCAC+CGG - chr4.4:30044714-30044733 None:intergenic 40.0%
CATGAATCATGTTTATGCCC+AGG - chr4.4:30040494-30040513 None:intergenic 40.0%
CCAAGAGATGGAAAACCTAT+AGG - chr4.4:30043234-30043253 None:intergenic 40.0%
CCACATACATTTACCACACA+AGG + chr4.4:30043893-30043912 MS.gene56477:CDS 40.0%
CCATCCTGTTAAGAATGCAA+TGG + chr4.4:30044141-30044160 MS.gene56477:intron 40.0%
CCATTGCATTCTTAACAGGA+TGG - chr4.4:30044144-30044163 None:intergenic 40.0%
CCGCAGTAGCAGATATTTAT+AGG + chr4.4:30044035-30044054 MS.gene56477:CDS 40.0%
CCTTGTGTGGTAAATGTATG+TGG - chr4.4:30043896-30043915 None:intergenic 40.0%
CTGCTCTACAAAATAGGTGA+AGG - chr4.4:30043961-30043980 None:intergenic 40.0%
CTTATCGGTGGAGATTAGTA+GGG + chr4.4:30040195-30040214 MS.gene56477:CDS 40.0%
CTTATGTGACACTCTACCAT+TGG + chr4.4:30043644-30043663 MS.gene56477:CDS 40.0%
GAAAAACAGACATTTCGCGT+TGG + chr4.4:30040572-30040591 MS.gene56477:intron 40.0%
GAAAATGTATCCCACACAGA+TGG - chr4.4:30042688-30042707 None:intergenic 40.0%
GACGTGCTTTCAGAAATTTG+GGG + chr4.4:30043838-30043857 MS.gene56477:CDS 40.0%
GAGACGTGCTTTCAGAAATT+TGG + chr4.4:30043836-30043855 MS.gene56477:CDS 40.0%
GAGGATCTCAACTCACTTAA+TGG - chr4.4:30041539-30041558 None:intergenic 40.0%
GATTCAGATATGCTTATCGG+TGG + chr4.4:30040183-30040202 MS.gene56477:CDS 40.0%
GATTCATGTTTGCCACAGAA+AGG + chr4.4:30043796-30043815 MS.gene56477:intron 40.0%
GCGTATGAAAGTTGCTTACT+GGG - chr4.4:30043269-30043288 None:intergenic 40.0%
GCTGGATACTCTTCTAGATT+TGG + chr4.4:30045691-30045710 MS.gene56477:CDS 40.0%
GCTTTCAGAAATTTGGGGAT+AGG + chr4.4:30043843-30043862 MS.gene56477:CDS 40.0%
GGAAGACATACAACTCATGA+AGG + chr4.4:30043193-30043212 MS.gene56477:intron 40.0%
GGATAATCTCCGAACATCAA+AGG - chr4.4:30044518-30044537 None:intergenic 40.0%
GTGCCAAATATAAAGCCATG+TGG - chr4.4:30040229-30040248 None:intergenic 40.0%
TACAACTCATGAAGGACTTG+GGG + chr4.4:30043201-30043220 MS.gene56477:CDS 40.0%
TCACATTAGTGTTCCGTAGT+CGG - chr4.4:30040737-30040756 None:intergenic 40.0%
TCTTCTTTAGTGTTTGTGGC+AGG - chr4.4:30044298-30044317 None:intergenic 40.0%
TGAGAAGCAGAGTAGGAAAT+AGG + chr4.4:30044546-30044565 MS.gene56477:CDS 40.0%
TGCGTATGAAAGTTGCTTAC+TGG - chr4.4:30043270-30043289 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr4.4:30041189-30041208 None:intergenic 40.0%
TGGTTAGTAGAACTAGGTAG+TGG - chr4.4:30040614-30040633 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr4.4:30041190-30041209 None:intergenic 40.0%
TTGGTCACTGCTGGATAATT+GGG + chr4.4:30045660-30045679 MS.gene56477:CDS 40.0%
! AGAGCTCAAGATTTTCAGCT+AGG + chr4.4:30044334-30044353 MS.gene56477:CDS 40.0%
! ATATTTTGCTTGGTCACTGC+TGG + chr4.4:30045651-30045670 MS.gene56477:CDS 40.0%
! CAATGGTAGAGTGTCACATA+AGG - chr4.4:30043646-30043665 None:intergenic 40.0%
! CCTATAGGTTTTCCATCTCT+TGG + chr4.4:30043231-30043250 MS.gene56477:CDS 40.0%
! CTTCACCTATTTTGTAGAGC+AGG + chr4.4:30043959-30043978 MS.gene56477:CDS 40.0%
! TAAGTGAGTTGAGATCCTCT+CGG + chr4.4:30041540-30041559 MS.gene56477:intron 40.0%
! TAGCTAAATCTGGTTGGTCA+TGG + chr4.4:30045393-30045412 MS.gene56477:intron 40.0%
!! ATGCTTTGAAGGACGAGAAA+CGG + chr4.4:30045464-30045483 MS.gene56477:CDS 40.0%
!! CGTAGCTATTCTGGAGTTTA+TGG + chr4.4:30042984-30043003 MS.gene56477:intron 40.0%
!!! GAGAATTTTTGTGCCGACTA+CGG + chr4.4:30040721-30040740 MS.gene56477:intron 40.0%
ACTGCTGGATAATTGGGAGT+GGG + chr4.4:30045666-30045685 MS.gene56477:CDS 45.0%
AGTCTCCTTAACTAGTACCC+CGG + chr4.4:30040870-30040889 MS.gene56477:intron 45.0%
ATCAACGCATTACTGGCGAA+AGG + chr4.4:30043468-30043487 MS.gene56477:CDS 45.0%
CCCTATGTTAACTAATGCCC+CGG - chr4.4:30040892-30040911 None:intergenic 45.0%
CCTATGTTAACTAATGCCCC+GGG - chr4.4:30040891-30040910 None:intergenic 45.0%
CGGAATCTGCAATAGAATCG+TGG - chr4.4:30044694-30044713 None:intergenic 45.0%
CTAGCGTCTCTGTCTACATA+CGG - chr4.4:30043110-30043129 None:intergenic 45.0%
CTATGTTAACTAATGCCCCG+GGG - chr4.4:30040890-30040909 None:intergenic 45.0%
CTCCAAGAAGGATGCTTTGA+AGG + chr4.4:30045453-30045472 MS.gene56477:CDS 45.0%
CTTGGTCACTGCTGGATAAT+TGG + chr4.4:30045659-30045678 MS.gene56477:CDS 45.0%
GAAGGAGCAGTGAAAGAAGA+TGG + chr4.4:30042655-30042674 MS.gene56477:CDS 45.0%
GAGCAGTGAAAGAAGATGGA+AGG + chr4.4:30042659-30042678 MS.gene56477:CDS 45.0%
GCAGTGAAAGAAGATGGAAG+GGG + chr4.4:30042661-30042680 MS.gene56477:CDS 45.0%
GCCTCAGATGGAGAAAACTT+TGG - chr4.4:30044575-30044594 None:intergenic 45.0%
GCCTTGGAAGACAAGTATTC+GGG + chr4.4:30043679-30043698 MS.gene56477:CDS 45.0%
GCTTATCGGTGGAGATTAGT+AGG + chr4.4:30040194-30040213 MS.gene56477:CDS 45.0%
GGTAATGTTAACTAGTGCCC+CGG - chr4.4:30041064-30041083 None:intergenic 45.0%
GTGTCTCCTTAACTAGTGTC+CGG + chr4.4:30041042-30041061 MS.gene56477:intron 45.0%
TACTTGTCTTCCAAGGCTTG+AGG - chr4.4:30043676-30043695 None:intergenic 45.0%
TCCCGAATACTTGTCTTCCA+AGG - chr4.4:30043683-30043702 None:intergenic 45.0%
TGGAAGACAAGTATTCGGGA+TGG + chr4.4:30043683-30043702 MS.gene56477:CDS 45.0%
TGTCTCCTTAACTAGTGTCC+GGG + chr4.4:30041043-30041062 MS.gene56477:intron 45.0%
TTAACAAGAGCAGCCTCAGA+TGG - chr4.4:30044587-30044606 None:intergenic 45.0%
! ACCACACAAGGGTATGATGT+CGG + chr4.4:30043905-30043924 MS.gene56477:CDS 45.0%
! AGTAGGGCAGATTTTCCACA+TGG + chr4.4:30040211-30040230 MS.gene56477:CDS 45.0%
! ATCGATAAGTTCCGACTTGC+AGG + chr4.4:30044983-30045002 MS.gene56477:intron 45.0%
! ATCTGAGGCTGCTCTTGTTA+AGG + chr4.4:30044586-30044605 MS.gene56477:CDS 45.0%
! CCGGGGCATTAGTTAACATA+GGG + chr4.4:30040889-30040908 MS.gene56477:intron 45.0%
! CTCAAGATTTTCAGCTAGGC+TGG + chr4.4:30044338-30044357 MS.gene56477:CDS 45.0%
! GCCAAAGTTTTCTCCATCTG+AGG + chr4.4:30044571-30044590 MS.gene56477:CDS 45.0%
! GTCCTTCAAAGCATCCTTCT+TGG - chr4.4:30045458-30045477 None:intergenic 45.0%
! TCTGAGGCTGCTCTTGTTAA+GGG + chr4.4:30044587-30044606 MS.gene56477:CDS 45.0%
!! GGTTGGTCATGGTTTTCACA+GGG + chr4.4:30045404-30045423 MS.gene56477:intron 45.0%
!! TGGTTGGTCATGGTTTTCAC+AGG + chr4.4:30045403-30045422 MS.gene56477:intron 45.0%
!! TTCAATAAATTAAAAAAAAA+TGG - chr4.4:30042399-30042418 None:intergenic 5.0%
ACCGACATCATACCCTTGTG+TGG - chr4.4:30043909-30043928 None:intergenic 50.0%
ACTCATGAAGGACTTGGGGA+TGG + chr4.4:30043205-30043224 MS.gene56477:CDS 50.0%
ACTTGGGGATGGATGCCTAT+AGG + chr4.4:30043216-30043235 MS.gene56477:CDS 50.0%
CACTGCTGGATAATTGGGAG+TGG + chr4.4:30045665-30045684 MS.gene56477:CDS 50.0%
CTACTGCGGCATGAGTAAGT+AGG - chr4.4:30044024-30044043 None:intergenic 50.0%
GTCTCCTTAACTAGTACCCC+GGG + chr4.4:30040871-30040890 MS.gene56477:intron 50.0%
GTCTCCTTAACTAGTGTCCG+GGG + chr4.4:30041044-30041063 MS.gene56477:intron 50.0%
TACTACAACGCATCACTGCG+AGG - chr4.4:30045203-30045222 None:intergenic 50.0%
TCGGTTTACAAGCACCTGGA+CGG + chr4.4:30043924-30043943 MS.gene56477:CDS 50.0%
TCTCCTTAACTAGTACCCCG+GGG + chr4.4:30040872-30040891 MS.gene56477:intron 50.0%
TGCTTTCTTAACCAGGGCAC+TGG - chr4.4:30040924-30040943 None:intergenic 50.0%
TGGATCTGGCGCAATCAATC+AGG + chr4.4:30043419-30043438 MS.gene56477:CDS 50.0%
TGTCTTCCAAGGCTTGAGGT+AGG - chr4.4:30043672-30043691 None:intergenic 50.0%
! CACTGCCTCTTCAGCTTTTC+AGG + chr4.4:30040246-30040265 MS.gene56477:CDS 50.0%
! CCCGGGGCATTAGTTAACAT+AGG + chr4.4:30040888-30040907 MS.gene56477:intron 50.0%
! GGTCATGGTTTTCACAGGGA+TGG + chr4.4:30045408-30045427 MS.gene56477:intron 50.0%
!! GATGTCGGTTTACAAGCACC+TGG + chr4.4:30043920-30043939 MS.gene56477:CDS 50.0%
AGGCTTGAGGTAGGTCCCAA+TGG - chr4.4:30043663-30043682 None:intergenic 55.0%
AGTGCCCCGGACACTAGTTA+AGG - chr4.4:30041051-30041070 None:intergenic 55.0%
ATGGAAGGGGACCATCTGTG+TGG + chr4.4:30042674-30042693 MS.gene56477:CDS 55.0%
GATAATTGGGAGTGGGCAGC+TGG + chr4.4:30045673-30045692 MS.gene56477:CDS 55.0%
GGTCATGTTAACCAGTGCCC+TGG + chr4.4:30040910-30040929 MS.gene56477:intron 55.0%
TCTGGCGCAATCAATCAGGC+AGG + chr4.4:30043423-30043442 MS.gene56477:CDS 55.0%
TGGAAGGGGACCATCTGTGT+GGG + chr4.4:30042675-30042694 MS.gene56477:CDS 55.0%
TTGGGACCTACCTCAAGCCT+TGG + chr4.4:30043663-30043682 MS.gene56477:CDS 55.0%
TTGGGGATAGGGTGAAGCAC+TGG + chr4.4:30043855-30043874 MS.gene56477:CDS 55.0%
! ATGCCCCGGGGTACTAGTTA+AGG - chr4.4:30040878-30040897 None:intergenic 55.0%
!! AGGAGAATGGAGCACCGTCC+AGG - chr4.4:30043941-30043960 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 30040127 30045804 30040127 ID=MS.gene56477
chr4.4 mRNA 30040127 30045804 30040127 ID=MS.gene56477.t1;Parent=MS.gene56477
chr4.4 exon 30040127 30040267 30040127 ID=MS.gene56477.t1.exon1;Parent=MS.gene56477.t1
chr4.4 CDS 30040127 30040267 30040127 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30042652 30042718 30042652 ID=MS.gene56477.t1.exon2;Parent=MS.gene56477.t1
chr4.4 CDS 30042652 30042718 30042652 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30042802 30042860 30042802 ID=MS.gene56477.t1.exon3;Parent=MS.gene56477.t1
chr4.4 CDS 30042802 30042860 30042802 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30043194 30043269 30043194 ID=MS.gene56477.t1.exon4;Parent=MS.gene56477.t1
chr4.4 CDS 30043194 30043269 30043194 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30043418 30043489 30043418 ID=MS.gene56477.t1.exon5;Parent=MS.gene56477.t1
chr4.4 CDS 30043418 30043489 30043418 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30043635 30043722 30043635 ID=MS.gene56477.t1.exon6;Parent=MS.gene56477.t1
chr4.4 CDS 30043635 30043722 30043635 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30043814 30044069 30043814 ID=MS.gene56477.t1.exon7;Parent=MS.gene56477.t1
chr4.4 CDS 30043814 30044069 30043814 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30044244 30044359 30044244 ID=MS.gene56477.t1.exon8;Parent=MS.gene56477.t1
chr4.4 CDS 30044244 30044359 30044244 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30044505 30044728 30044505 ID=MS.gene56477.t1.exon9;Parent=MS.gene56477.t1
chr4.4 CDS 30044505 30044728 30044505 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30044834 30044865 30044834 ID=MS.gene56477.t1.exon10;Parent=MS.gene56477.t1
chr4.4 CDS 30044834 30044865 30044834 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30045005 30045107 30045005 ID=MS.gene56477.t1.exon11;Parent=MS.gene56477.t1
chr4.4 CDS 30045005 30045107 30045005 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30045425 30045533 30045425 ID=MS.gene56477.t1.exon12;Parent=MS.gene56477.t1
chr4.4 CDS 30045425 30045533 30045425 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
chr4.4 exon 30045630 30045804 30045630 ID=MS.gene56477.t1.exon13;Parent=MS.gene56477.t1
chr4.4 CDS 30045630 30045804 30045630 ID=cds.MS.gene56477.t1;Parent=MS.gene56477.t1
Gene Sequence

>MS.gene56477

ATGGGGTTGAGAAGCATTGTTGTTATGATATTAGCAATAATTACACTATTATTAGAGATTCAGATATGCTTATCGGTGGAGATTAGTAGGGCAGATTTTCCACATGGCTTTATATTTGGCACTGCCTCTTCAGCTTTTCAGGTTAGTCTCATTTCATGGTCACAAATAACCCACTCTCATTTTAGATAAATATATATATATATATATATATATATATATATATATATATAAAAATTATTTTTTTCTCTTTTTTATTTATAAATAAACAGCAAGAAAGAGAAATAGTAAAAGTAAAGCAAATTCTTGATGAAATGTCTTCACACTTTTAAATTAATTTTGTTTAGAGTATATGATTTTCTTACTTCCTGGGCATAAACATGATTCATGAAGATAGACGATGAGATGAAAAAACAACACAGGTGGTTGTGTGTATATAGTAAATGACGAAAAACAGACATTTCGCGTTGGAGTGAGAAGTTGTGTTCCACTACCTAGTTCTACTAACCAACTTAATCTGTCGTTTTACTTTGCCTCTCTCTTATTAATTAATAATTAATTAAATGCTAATGCGAAAAGTCCATTAATTTTTTTATTGAGAATTTTTGTGCCGACTACGGAACACTAATGTGAAACTCTTGTCCTTTTAAATTTAGGCCAAAGTAGTTGATACTCCATCTGCTAACATTAGTATTCCGGAGTCGGCACAAAAATTTAAAAGGACATGTTAGCATAACCCTTATATTAGTCTCCTTAACTAGTACCCCGGGGCATTAGTTAACATAGGGTCATGTTAACCAGTGCCCTGGTTAAGAAAGCACAAAATAGAAACTTTTACTTGAAAACAACAAAATTTTGACTTTTAAAAAGTTGAACATAACACTTTTTAACAATTTTCAATGCAAACTTTCTATATTAGTGTCTCCTTAACTAGTGTCCGGGGCACTAGTTAACATTACCCTTATATATTTTCTATAAAGGTTTTTATATCATACGTAAATTTGCATATGATAATGTTAAGAAATTCAAAATAGTAAATTTGCATTTTATATTACAAATACTCCCTCCGGTCACATTTATAAGCAAAAATTAACTTTTTAGGTTCATATAATAATTAATGTATCTAGTCATATTCATAGACTAAATACATTTGTTATTCAATGAACCTAAAAAATTGTGTTTTGCTTATAAATGTGATCGGAGGAAGTATATAACTTTTAACAGATAATTGTTGTTTTTCAATAAAACATTGTTACTTTTAATTATTTTAACATGTACAATATTGCACAGATTATACAAACAACTCTTTCTATAATACGCTTAATCGAGTAGGGATCCTCTCCATTTAGTAAAATAAATGAAGTATGCATTTTTAGAGATAGATAGACACATAAAATAAAAAGTGAATCCTACCATTAAGTGAGTTGAGATCCTCTCGGCTTATAAAAATAAATGGAGCCATTATAAAAGAGATAGACACACAAAATAGGTGGTGAGTCCTATCATTAAATTATTAAATGAGTCCCACCATCATTAATTAATTTTAAGATTTTTTTTGTGTCTTTATCTCTCTAAATGAAAGAAATTGAGAAAAGTTTAAATGGAGAAGATATCCTAACTCCCATTAAGTAGGTCTCTTACCATCATTTATTATTATTTGGGTTTGTCTAACATGTGCAATATTGCACATGTTAAGACAACTAAAAGTAGTAACTTTTCATTGAAAACCAACAATTATTTATTAAAAGTTACATATTTAATATAAAAAACACAAGTTCCAAATCAAAGTTGCTACTTTAAACTTCTTATCATGTGCAAATTTGCACATGATAGAAAAACCCTTATTTTATAATTTTTTTTATGTCTTTATCTCTTGAAATGGTAGAAATGGTGAAGATCACAAATAAAGAGGATCTTAACTCCCTTTAATCATTTATGATTTAATTCGATTCATTTATATCTCTACTGTAAATAATATAGGGCATTATTGACAAACCAATAAATGATACATTGTACTTTTAAAATGACTACTAAATTAAATAGAAACAAAATTTTCTTGCAGATACGAAAAGTAAAGATGCATTATCATCTTACAAGTTTACTTACTTGGTTGCTTTCGTTAGATTTAGTTGTATTTCTGTACTGTCCTAATTGGCTCTACTTATCCCTATAATACTATTAGTAATAGTCTATTACTACTCCGGAGTAAAATAGAAGCAAAAATGGTATTTGAAAAGTTCATTTATCTGCATATAAATGAATCTTTAAAATACCATTTTTTTTTAATTTATTGAATCTTGTTTTTCAGAAATATTATTATCTTAAATTATTTGTCGTTGATTTTTAAATTGAAAAACATTATTATTTGTAATAAAGATAATTTATTTTATTAGAATTGTAGCATTTGTTTTACAAGTTTTAACTTATTACTTGACTTTCTTTTAAAAAGGTGATTTGTTTGACTTTTATGATTCTATCTTATTTGACTTTTATGATTCATTCATACATGTGATTGAACTTGTGTCTAGTATGAAGGAGCAGTGAAAGAAGATGGAAGGGGACCATCTGTGTGGGATACATTTTCTCATACTTTTGGTAAGACACACTTCACATGCATGATACTTATAATATTCTAAAATGCTGGCTGATCATTACCTCACATTTGTAATTTGTTACAGGCAAGGTAACAGATTTCAGCAATGCTGATGTTGCAGTTGATCAGTACCACCGATACGAAGTAAGTAATTAATACAGTTCAGTCTACGTCTTGTGAGCTTAATTAGTTTGCATTTTAGACCATGTTTGGATAAACAATTTAATTAAGCGTTTATTATATAAATGTTTATGAATAAGTTGTTTTCGTAGCTATTCTGGAGTTTATGGAAATACACTAAAAATAACTTATGAACATGTTTTCATAAGTACTCTCAACCAGTCCTACAAGTAGTATGTAAGTAGGTAAACTCAAATATGTCAATCTAAACCGTATGTAGACAGAGACGCTAGTAATTGCTTTAACGATTGGTCAAAGGTTGTTTGTATTTGAACATTGAAATTTTTGTTTATACAGGAAGACATACAACTCATGAAGGACTTGGGGATGGATGCCTATAGGTTTTCCATCTCTTGGTCTCGAATTTATCCCAGTAAGCAACTTTCATACGCATCATTAACTTCAAAATTAGTCCTTGGTTTAATGCTTTGTACAGTACTGTGAAACCATAAACACAGTTTCAGTTTACTTGTTCATAACTTCTAAGATTATCTTAAAACCATAAACATTTCATGTGTTAGATGGATCTGGCGCAATCAATCAGGCAGGAATCGATCATTATAATAAACTCATCAACGCATTACTGGCGAAAGGTAGCTCTCTATATCCCTGTGTAATTGTTACATCTGATCAATTCTCTATTTTAGTTTTGAACTTAAAATTTTCAATCTGTGTATAGTTAATTTAATAATTAATACTGTATGCATCTTCTGATTTCTTGATCCATTACATTTGTAGGAATTGAACCTTATGTGACACTCTACCATTGGGACCTACCTCAAGCCTTGGAAGACAAGTATTCGGGATGGCTCAGCACTGAGATCATGTATGAGAAATGTTTTAAAAATAATTTTTCATTATTAGTATGATTCCGAATATGAAAAAAAATATACTTATATGATTCATGTTTGCCACAGAAAGGACTTTGCAACTTATGCTGAGACGTGCTTTCAGAAATTTGGGGATAGGGTGAAGCACTGGATCACATTTAACGAGCCACATACATTTACCACACAAGGGTATGATGTCGGTTTACAAGCACCTGGACGGTGCTCCATTCTCCTTCACCTATTTTGTAGAGCAGGGAACTCCGCTACTGAACCTTACATTGTTGCTCACAATGTCCTACTTACTCATGCCGCAGTAGCAGATATTTATAGGAAAAAGTATAAGGTAAAGTTATGGATTTTTCGAATACTTCAAATCAGAGACATATGAATATTATTGCGGTTGTTATAAAGTTTCCATCCTGTTAAGAATGCAATGGAACAAATCATATTTGTAACTTGTATTTTGCTTCAATGCACATGGATATAAACTGCTACTAATAACTCAGTTATTCGACAGAATACACAAGGTGGATCACTTGGGATAGCTTTTGATGTAATTTGGTATGAGCCTGCCACAAACACTAAAGAAGACATTGCAGCAGCTCAGAGAGCTCAAGATTTTCAGCTAGGCTGGTAAGTCATATGCACATAGTACCTCAGATTGAAATTTTCACATCAACAGTTGAAGTTCGTTAATAAAAAGACTACTTACATTTGAAAATAAGGCTTAAAGAAGTGATTATAACTCGATCTTAATTGTTAAATGTCTTAATCACAGGTTTCTTGATCCTTTGATGTTCGGAGATTATCCGAGTTCAATGAGAAGCAGAGTAGGAAATAGGCTGCCAAAGTTTTCTCCATCTGAGGCTGCTCTTGTTAAGGGTTCATTAGATTTTGTGGGAATCAATCATTACACCACATTTTATGCAAGAAACAACTCTACTAATTTGATAGGAATATTGCTCCACGATTCTATTGCAGATTCCGGTGCTATTACTCTTCGTATGTTTCAGATCAAACATTATCAAGCAATCATTTACTTTGTCAGTGTTTTATAGTTTTGCTGTTTTGCCTTGCCACTAAGTTATTACTTCCCTTCTTTTTCAGCATTCAATGGTACTAAAGCTATTGCAGAAAGGGTAAGTTATACTTATTTTAAGAATAAACAACTCTCTTTCATTAACCACATAAACAGAACTACTAAGTGTACATGTCTCAAATGAAATTCAGTCAATGGCTTAGTTTCACATTCACTAATCGATAAGTTCCGACTTGCAGGCAAATTCTATATGGTTATATATCGTGCCACAAAGTATGAGAACCTTAATGAACTACATCAAACAAAAGTATGGGAACCCTCCTGTCTTTATCACTGAAAATGGTAATCTTCAAACTCTTATAACATAGCGAAATTCCATCTTGCATCTATAAACTGAAGTCTGCAATAAATTACGTAGTTGTTAAAAAAAATTACCTCGCAGTGATGCGTTGTAGTATTTTTTCAGGGATTATGATTTCAAAATGAAACAGTAGAACATTATATCTCTTAATCCTTAGCAGCATAGTTTTTGCATGTTCCACAATTTGCAATAGAACACATATTGTTTTTCTTTCTTCCCAAGCAACAACCACAAAATGAAAGTGCATGTAAATAATAAAAAATTGCTAGCTAAATCTGGTTGGTCATGGTTTTCACAGGGATGGATGATCCAAATAATATATTTATCTCCAAGAAGGATGCTTTGAAGGACGAGAAACGGATTAGATACTTCAGCGGCTATTTATCTTATCTACAGGCATCTATTAAGTATGTAATAGTTGTTATTGTCTTACTGCATTATACTTTCCATGACCAAAATTTGAAGTCAATAAATTAATGAACTATTGATTTGGCTAATTACAGAGATGGTTGCAATGTGAAAGGATATTTTGCTTGGTCACTGCTGGATAATTGGGAGTGGGCAGCTGGATACTCTTCTAGATTTGGTCTGTATTTTGTTGACTACAGAGACAATTTGAAGAGATACCCAAAACAATCTGTTCAATGGTTCAAGAACTTCTTGAAACCAGCCAAATAG
Protein sequence

>MS.gene56477.t1

MGLRSIVVMILAIITLLLEIQICLSVEISRADFPHGFIFGTASSAFQYEGAVKEDGRGPSVWDTFSHTFGKVTDFSNADVAVDQYHRYEEDIQLMKDLGMDAYRFSISWSRIYPNGSGAINQAGIDHYNKLINALLAKGIEPYVTLYHWDLPQALEDKYSGWLSTEIIKDFATYAETCFQKFGDRVKHWITFNEPHTFTTQGYDVGLQAPGRCSILLHLFCRAGNSATEPYIVAHNVLLTHAAVADIYRKKYKNTQGGSLGIAFDVIWYEPATNTKEDIAAAQRAQDFQLGWFLDPLMFGDYPSSMRSRVGNRLPKFSPSEAALVKGSLDFVGINHYTTFYARNNSTNLIGILLHDSIADSGAITLPFNGTKAIAERANSIWLYIVPQSMRTLMNYIKQKYGNPPVFITENGMDDPNNIFISKKDALKDEKRIRYFSGYLSYLQASIKDGCNVKGYFAWSLLDNWEWAAGYSSRFGLYFVDYRDNLKRYPKQSVQWFKNFLKPAK