AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000032.t1 MTR_3g033810 95.935 492 19 1 1 491 1 492 0.0 975
MS.gene000032.t1 MTR_3g033790 86.965 491 62 2 1 491 1 489 0.0 889
MS.gene000032.t1 MTR_4g083000 52.092 478 215 4 18 482 26 502 0.0 517
MS.gene000032.t1 MTR_4g081530 49.582 478 226 5 19 482 23 499 1.65e-169 488
MS.gene000032.t1 MTR_6g078450 50.522 479 218 6 20 482 36 511 7.16e-168 484
MS.gene000032.t1 MTR_5g044000 48.096 499 223 7 18 481 23 520 4.49e-166 479
MS.gene000032.t1 MTR_0110s0040 50.311 483 204 7 20 481 43 510 1.01e-163 473
MS.gene000032.t1 MTR_0110s0030 49.896 483 206 7 20 481 43 510 3.53e-163 472
MS.gene000032.t1 MTR_2g098520 48.225 479 233 6 18 482 32 509 2.18e-161 467
MS.gene000032.t1 MTR_3g026280 48.958 480 221 8 18 481 20 491 2.50e-159 461
MS.gene000032.t1 MTR_2g098540 47.908 478 236 4 18 482 29 506 4.39e-159 461
MS.gene000032.t1 MTR_2g098790 47.708 480 234 7 18 482 36 513 5.03e-159 461
MS.gene000032.t1 MTR_6g078330 48.529 476 232 4 20 482 37 512 1.56e-158 460
MS.gene000032.t1 MTR_6g078380 48.958 480 227 6 19 482 35 512 2.19e-158 460
MS.gene000032.t1 MTR_4g066580 47.917 480 233 7 18 482 37 514 2.86e-157 457
MS.gene000032.t1 MTR_4g066590 48.755 482 233 5 20 488 33 513 3.65e-157 457
MS.gene000032.t1 MTR_4g023000 47.107 484 225 7 18 482 22 493 4.58e-157 456
MS.gene000032.t1 MTR_4g066630 47.292 480 234 6 18 481 37 513 1.91e-156 455
MS.gene000032.t1 MTR_3g026400 46.234 478 244 5 18 484 35 510 2.12e-156 454
MS.gene000032.t1 MTR_4g066240 46.778 481 237 6 18 482 34 511 2.24e-156 454
MS.gene000032.t1 MTR_4g066240 46.680 482 237 7 18 482 34 512 1.03e-154 450
MS.gene000032.t1 MTR_5g071520 48.571 490 224 8 18 482 37 523 2.00e-154 450
MS.gene000032.t1 MTR_4g066640 47.269 476 240 5 18 482 37 512 6.83e-154 448
MS.gene000032.t1 MTR_3g026620 45.607 478 247 5 18 484 36 511 7.13e-154 448
MS.gene000032.t1 MTR_3g028720 46.347 479 242 6 18 482 36 513 1.61e-153 448
MS.gene000032.t1 MTR_4g066330 47.034 472 227 6 17 482 38 492 8.35e-153 444
MS.gene000032.t1 MTR_2g079580 46.502 486 244 5 19 491 31 513 1.03e-152 446
MS.gene000032.t1 MTR_2g098540 48.140 457 224 4 39 482 6 462 6.79e-150 436
MS.gene000032.t1 MTR_4g066210 45.380 487 247 6 18 488 41 524 8.07e-148 433
MS.gene000032.t1 MTR_3g026400 44.928 483 248 8 13 484 4 479 9.56e-148 431
MS.gene000032.t1 MTR_2g079550 46.091 486 246 5 19 491 29 511 2.24e-147 432
MS.gene000032.t1 MTR_4g066280 46.186 472 231 6 17 482 38 492 2.44e-147 431
MS.gene000032.t1 MTR_2g022710 44.135 503 252 7 7 489 22 515 1.06e-144 425
MS.gene000032.t1 MTR_4g083000 50.493 406 187 4 90 482 4 408 2.07e-144 420
MS.gene000032.t1 MTR_4g131810 44.676 479 235 6 25 481 33 503 3.61e-140 413
MS.gene000032.t1 MTR_4g066340 46.528 432 219 3 63 482 7 438 5.93e-140 410
MS.gene000032.t1 MTR_6g078450 49.176 425 197 6 20 428 36 457 4.72e-139 408
MS.gene000032.t1 MTR_2g022760 46.138 479 230 6 23 481 39 509 7.04e-139 410
MS.gene000032.t1 MTR_4g015420 43.802 484 241 7 17 486 62 528 9.39e-139 410
MS.gene000032.t1 MTR_4g016920 42.737 475 249 7 21 483 28 491 2.17e-133 396
MS.gene000032.t1 MTR_4g015460 43.396 477 240 8 19 482 41 500 1.72e-132 393
MS.gene000032.t1 MTR_4g131800 45.283 477 234 6 25 482 521 989 2.20e-132 409
MS.gene000032.t1 MTR_4g066630 46.009 426 211 6 18 427 37 459 9.97e-131 387
MS.gene000032.t1 MTR_2g043200 44.206 466 235 6 25 482 70 518 3.21e-130 388
MS.gene000032.t1 MTR_5g068740 42.558 477 244 10 21 482 28 489 1.87e-129 386
MS.gene000032.t1 MTR_1g088610 41.962 479 243 11 21 482 28 488 8.75e-128 385
MS.gene000032.t1 MTR_1g088610 35.593 118 68 3 367 482 502 613 9.56e-18 86.7
MS.gene000032.t1 MTR_7g068910 41.474 475 255 6 20 482 31 494 3.11e-127 380
MS.gene000032.t1 MTR_7g033860 39.917 481 277 6 12 485 40 515 3.37e-127 380
MS.gene000032.t1 MTR_3g028720 44.706 425 220 6 18 428 36 459 1.71e-126 376
MS.gene000032.t1 MTR_6g078330 46.420 405 205 3 90 482 4 408 8.53e-126 373
MS.gene000032.t1 MTR_4g066630 47.059 391 188 6 18 392 37 424 1.93e-124 370
MS.gene000032.t1 MTR_7g068910 40.619 485 255 7 20 482 31 504 5.15e-124 372
MS.gene000032.t1 MTR_4g066580 48.205 390 185 7 18 392 37 424 1.41e-123 368
MS.gene000032.t1 MTR_3g028720 46.667 390 191 7 18 392 36 423 4.46e-121 361
MS.gene000032.t1 MTR_4g066240 45.524 391 194 6 18 392 34 421 7.02e-121 361
MS.gene000032.t1 MTR_2g022710 43.439 442 222 6 7 428 22 455 1.08e-120 362
MS.gene000032.t1 MTR_2g022710 43.439 442 222 6 7 428 22 455 1.63e-120 362
MS.gene000032.t1 MTR_2g079580 46.512 387 192 4 19 392 31 415 7.80e-120 358
MS.gene000032.t1 MTR_0110s0040 53.846 312 134 2 20 322 43 353 8.16e-118 352
MS.gene000032.t1 MTR_0108s0030 38.689 473 260 7 22 487 5 454 1.44e-117 353
MS.gene000032.t1 MTR_6g078330 45.932 381 195 2 113 482 28 408 1.80e-116 349
MS.gene000032.t1 MTR_2g022710 43.951 405 201 4 7 392 22 419 1.73e-115 347
MS.gene000032.t1 MTR_6g078330 51.070 327 148 3 20 334 37 363 2.57e-115 345
MS.gene000032.t1 MTR_2g022760 45.012 411 199 5 90 481 4 406 7.97e-115 345
MS.gene000032.t1 MTR_4g067040 46.277 376 190 3 18 381 32 407 1.28e-114 344
MS.gene000032.t1 MTR_3g026400 51.111 315 143 3 18 322 35 348 5.81e-114 341
MS.gene000032.t1 MTR_2g022710 42.959 419 210 7 91 489 5 414 2.46e-112 338
MS.gene000032.t1 MTR_4g066640 50.779 321 148 4 18 328 37 357 1.12e-111 336
MS.gene000032.t1 MTR_4g066630 49.231 325 153 3 18 330 37 361 1.12e-111 335
MS.gene000032.t1 MTR_2g022710 43.766 393 196 3 7 381 22 407 3.25e-111 335
MS.gene000032.t1 MTR_7g051510 40.938 469 256 8 21 481 76 531 8.25e-111 338
MS.gene000032.t1 MTR_3g028720 47.975 321 155 3 18 326 36 356 2.03e-108 328
MS.gene000032.t1 MTR_7g051610 39.872 469 261 8 21 481 76 531 4.87e-108 332
MS.gene000032.t1 MTR_4g067040 47.009 351 174 3 18 356 32 382 7.93e-108 326
MS.gene000032.t1 MTR_1g088630 38.646 458 228 12 39 482 14 432 4.22e-105 321
MS.gene000032.t1 MTR_7g051650 38.593 469 268 7 21 481 76 532 9.50e-105 323
MS.gene000032.t1 MTR_2g022710 46.588 337 171 1 7 334 22 358 1.90e-104 318
MS.gene000032.t1 MTR_4g016920 40.831 409 219 7 87 483 1 398 4.69e-104 318
MS.gene000032.t1 MTR_7g051650 38.166 469 266 8 21 481 76 528 7.56e-103 318
MS.gene000032.t1 MTR_7g068900 41.304 414 219 8 82 482 17 419 7.20e-100 309
MS.gene000032.t1 MTR_1g088630 45.016 311 133 5 22 321 29 312 1.87e-88 275
MS.gene000032.t1 MTR_0110s0020 50.562 267 118 3 20 277 43 304 4.56e-85 265
MS.gene000032.t1 MTR_7g056747 37.010 408 231 7 81 481 9 397 7.83e-85 267
MS.gene000032.t1 MTR_1g088630 48.864 264 121 3 22 274 29 289 4.49e-84 262
MS.gene000032.t1 MTR_4g016920 44.961 258 131 2 87 334 1 257 6.91e-76 241
MS.gene000032.t1 MTR_4g122980 25.366 410 241 9 83 484 183 535 3.76e-24 106
MS.gene000032.t1 MTR_8g038650 37.500 88 55 0 234 321 57 144 1.25e-15 74.7
MS.gene000032.t1 MTR_8g038650 58.182 55 23 0 27 81 5 59 2.20e-14 71.2
MS.gene000032.t1 MTR_5g069350 37.607 117 42 5 377 482 92 188 7.84e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000032.t1 AT5G36890 69.703 472 141 2 22 491 18 489 0.0 708
MS.gene000032.t1 AT5G36890 70.000 470 138 3 22 488 18 487 0.0 704
MS.gene000032.t1 AT1G26560 51.046 478 219 6 18 481 30 506 6.59e-175 501
MS.gene000032.t1 AT3G18080 50.210 476 218 7 20 482 39 508 5.07e-165 476
MS.gene000032.t1 AT5G54570 48.637 477 229 6 20 481 30 505 1.49e-162 471
MS.gene000032.t1 AT3G18070 48.734 474 220 7 20 482 30 491 4.12e-162 468
MS.gene000032.t1 AT3G18070 48.945 474 225 7 20 482 30 497 4.80e-161 466
MS.gene000032.t1 AT2G44480 44.960 496 257 7 5 486 20 513 5.27e-155 451
MS.gene000032.t1 AT2G44480 44.960 496 257 7 5 486 51 544 1.13e-154 451
MS.gene000032.t1 AT3G60140 46.392 485 233 8 19 482 25 503 2.46e-153 449
MS.gene000032.t1 AT5G44640 48.125 480 228 8 19 483 30 503 9.00e-152 442
MS.gene000032.t1 AT2G44450 47.510 482 233 7 19 486 30 505 2.73e-151 441
MS.gene000032.t1 AT5G42260 48.945 474 221 8 19 477 30 497 6.59e-150 438
MS.gene000032.t1 AT5G24550 46.667 480 238 7 20 482 32 510 1.90e-148 435
MS.gene000032.t1 AT1G61820 45.041 484 251 6 17 486 27 509 3.57e-142 418
MS.gene000032.t1 AT2G44470 44.235 477 251 6 20 481 29 505 5.26e-142 421
MS.gene000032.t1 AT3G60130 44.906 481 244 8 17 482 27 501 1.24e-141 417
MS.gene000032.t1 AT5G24540 47.390 479 236 7 20 482 32 510 4.47e-141 416
MS.gene000032.t1 AT2G25630 46.234 478 219 9 19 481 29 483 7.26e-141 414
MS.gene000032.t1 AT1G02850 44.093 474 239 8 21 482 27 486 2.42e-139 410
MS.gene000032.t1 AT5G54570 46.572 423 211 5 20 428 30 451 2.93e-137 404
MS.gene000032.t1 AT1G61810 43.685 483 257 6 20 488 33 514 1.55e-134 399
MS.gene000032.t1 AT1G02850 42.052 497 239 9 21 482 27 509 4.68e-134 398
MS.gene000032.t1 AT4G21760 44.350 469 243 5 25 481 59 521 1.55e-132 395
MS.gene000032.t1 AT3G60120 43.205 493 255 10 9 482 4 490 2.00e-132 394
MS.gene000032.t1 AT1G02850 41.968 498 239 10 21 482 27 510 2.21e-132 394
MS.gene000032.t1 AT5G54570 47.044 406 200 5 90 481 4 408 4.49e-132 390
MS.gene000032.t1 AT1G51470 43.856 472 246 9 21 481 46 509 5.79e-132 392
MS.gene000032.t1 AT2G44460 45.436 482 246 8 22 488 31 510 5.94e-132 394
MS.gene000032.t1 AT1G47600 43.633 479 237 10 21 481 46 509 2.08e-131 390
MS.gene000032.t1 AT1G47600 43.424 479 237 11 21 481 46 508 3.35e-131 390
MS.gene000032.t1 AT4G27830 42.827 474 245 8 21 481 24 484 5.35e-131 389
MS.gene000032.t1 AT2G44480 44.175 412 217 5 87 486 1 411 6.27e-129 381
MS.gene000032.t1 AT1G61810 44.518 456 239 5 20 461 33 488 1.14e-128 385
MS.gene000032.t1 AT2G44490 41.649 485 252 11 22 482 16 493 1.36e-127 382
MS.gene000032.t1 AT4G21760 43.710 469 236 6 25 481 59 511 1.46e-127 382
MS.gene000032.t1 AT1G02850 41.983 474 222 9 21 482 27 459 1.75e-127 379
MS.gene000032.t1 AT2G32860 42.171 479 261 7 19 481 93 571 3.38e-127 383
MS.gene000032.t1 AT4G22100 40.664 482 261 9 22 491 24 492 2.74e-125 375
MS.gene000032.t1 AT2G32860 42.324 482 255 10 19 481 93 570 3.01e-125 378
MS.gene000032.t1 AT3G62750 42.581 465 248 9 21 481 24 473 3.52e-125 374
MS.gene000032.t1 AT1G66280 42.710 487 254 9 18 485 34 514 4.15e-125 375
MS.gene000032.t1 AT1G75940 43.149 489 249 11 21 485 38 521 5.16e-125 375
MS.gene000032.t1 AT3G62750 42.581 465 248 9 21 481 50 499 6.21e-125 374
MS.gene000032.t1 AT1G45191 41.564 486 250 11 11 482 19 484 2.01e-124 372
MS.gene000032.t1 AT4G27820 42.469 478 239 9 21 481 24 482 4.06e-123 369
MS.gene000032.t1 AT1G66270 42.710 487 254 10 18 485 34 514 2.04e-122 368
MS.gene000032.t1 AT3G21370 41.429 490 254 12 20 484 33 514 3.36e-122 368
MS.gene000032.t1 AT1G60090 40.506 474 255 8 21 482 25 483 5.81e-122 366
MS.gene000032.t1 AT1G45191 40.000 490 258 10 11 482 19 490 9.65e-121 363
MS.gene000032.t1 AT3G62740 41.064 470 253 9 21 481 24 478 2.57e-120 362
MS.gene000032.t1 AT5G25980 40.919 479 262 9 21 483 51 524 2.90e-120 363
MS.gene000032.t1 AT1G45191 40.404 495 254 11 11 482 19 495 5.93e-120 362
MS.gene000032.t1 AT5G28510 40.891 494 265 9 15 485 34 523 9.12e-120 362
MS.gene000032.t1 AT3G09260 41.564 486 260 10 19 485 34 514 1.06e-119 361
MS.gene000032.t1 AT1G60090 40.084 479 257 8 21 482 25 490 3.49e-119 359
MS.gene000032.t1 AT1G45191 39.960 503 257 11 11 482 19 507 5.35e-119 359
MS.gene000032.t1 AT1G66270 42.127 489 256 11 16 485 32 512 6.39e-119 359
MS.gene000032.t1 AT2G44470 42.417 422 229 5 20 427 29 450 1.57e-116 350
MS.gene000032.t1 AT1G52400 40.574 488 257 11 19 482 38 516 3.09e-116 352
MS.gene000032.t1 AT1G52400 40.574 488 257 11 19 482 38 516 3.09e-116 352
MS.gene000032.t1 AT3G60140 45.013 391 195 6 19 392 25 412 3.55e-115 347
MS.gene000032.t1 AT3G03640 40.333 481 264 11 22 482 36 513 1.64e-114 348
MS.gene000032.t1 AT3G60130 42.651 415 220 6 81 482 40 449 4.29e-114 345
MS.gene000032.t1 AT5G24540 44.917 423 218 6 20 427 32 454 2.75e-113 342
MS.gene000032.t1 AT5G26000 40.119 506 266 14 2 481 17 511 3.48e-113 345
MS.gene000032.t1 AT3G18070 49.379 322 151 3 20 332 30 348 1.06e-110 333
MS.gene000032.t1 AT1G61810 42.233 412 224 5 90 488 4 414 4.16e-109 330
MS.gene000032.t1 AT3G60130 41.928 415 212 8 81 482 40 438 7.17e-109 331
MS.gene000032.t1 AT1G02850 42.118 406 193 7 21 392 27 424 1.49e-107 327
MS.gene000032.t1 AT3G62750 41.889 413 222 8 21 430 50 447 2.87e-106 325
MS.gene000032.t1 AT2G44470 47.664 321 156 3 20 328 29 349 2.31e-104 317
MS.gene000032.t1 AT1G61810 43.928 387 203 5 20 392 33 419 2.36e-104 318
MS.gene000032.t1 AT4G27830 41.176 408 215 7 87 481 1 396 4.59e-104 317
MS.gene000032.t1 AT3G62740 41.205 415 221 8 21 427 24 423 7.42e-104 317
MS.gene000032.t1 AT5G25980 40.284 422 233 7 21 428 51 467 2.10e-103 317
MS.gene000032.t1 AT5G25980 40.284 422 233 7 21 428 51 467 2.10e-103 317
MS.gene000032.t1 AT2G44480 46.789 327 160 5 5 319 51 375 3.12e-100 306
MS.gene000032.t1 AT3G18070 48.137 322 153 5 172 482 102 420 5.08e-100 307
MS.gene000032.t1 AT3G18070 44.737 76 42 0 20 95 30 105 7.17e-16 80.1
MS.gene000032.t1 AT1G45191 45.427 328 164 4 11 328 19 341 1.73e-97 300
MS.gene000032.t1 AT1G45191 45.427 328 164 4 11 328 19 341 1.95e-97 300
MS.gene000032.t1 AT3G62750 40.351 399 223 8 87 481 1 388 3.87e-97 299
MS.gene000032.t1 AT3G62750 40.351 399 223 8 87 481 1 388 3.87e-97 299
MS.gene000032.t1 AT1G61820 42.663 368 197 5 132 486 4 370 3.97e-97 298
MS.gene000032.t1 AT5G26000 39.468 451 238 12 2 428 17 456 5.23e-97 300
MS.gene000032.t1 AT4G27820 40.534 412 213 8 87 481 1 397 4.68e-96 297
MS.gene000032.t1 AT4G27820 40.534 412 213 8 87 481 1 397 4.68e-96 297
MS.gene000032.t1 AT2G44450 42.340 359 191 4 139 486 1 354 3.88e-95 292
MS.gene000032.t1 AT1G60270 44.937 316 161 3 21 327 25 336 3.04e-94 291
MS.gene000032.t1 AT3G62750 46.429 308 159 3 21 327 24 326 4.99e-94 290
MS.gene000032.t1 AT3G62750 46.429 308 159 3 21 327 24 326 4.99e-94 290
MS.gene000032.t1 AT3G18070 46.945 311 151 5 183 482 1 308 2.70e-93 286
MS.gene000032.t1 AT3G62750 46.429 308 159 3 21 327 50 352 5.52e-93 290
MS.gene000032.t1 AT1G52400 38.426 432 234 10 19 427 38 460 9.79e-92 287
MS.gene000032.t1 AT2G44460 43.836 365 189 7 138 488 2 364 7.09e-87 274
MS.gene000032.t1 AT2G44480 41.503 306 167 4 192 486 3 307 7.05e-85 264
MS.gene000032.t1 AT5G48375 36.597 429 213 9 21 446 39 411 9.04e-84 266
MS.gene000032.t1 AT1G61810 47.426 272 133 2 20 281 33 304 2.57e-80 253
MS.gene000032.t1 AT1G51490 43.408 311 155 9 28 327 28 328 1.01e-73 239
MS.gene000032.t1 AT1G60270 43.673 245 128 2 92 327 6 249 2.57e-67 218
MS.gene000032.t1 AT3G18070 45.532 235 113 4 172 393 102 334 1.77e-62 207
MS.gene000032.t1 AT3G18070 44.737 76 42 0 20 95 30 105 3.38e-16 80.5
MS.gene000032.t1 AT3G18070 42.793 222 116 3 183 393 1 222 9.49e-56 186
MS.gene000032.t1 AT5G16580 35.417 288 160 7 163 438 26 299 1.58e-51 177
MS.gene000032.t1 AT3G06510 26.526 426 252 13 82 484 159 546 4.38e-26 112
MS.gene000032.t1 AT3G06510 26.877 413 233 14 82 484 159 512 7.23e-26 111

Find 110 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCCTCCTCCGAGAATT+TGG 0.134106 3.1:-24551879 None:intergenic
ATCAATGCTCTTCTTGAAAA+AGG 0.186679 3.1:+24550450 MS.gene000032:CDS
GATACTTGCTTTGCAAGTTT+TGG 0.249512 3.1:+24550987 MS.gene000032:CDS
ACCTCGTTGTATAGTGATTT+AGG 0.261744 3.1:-24551934 None:intergenic
TTGAATTCTTTGGACTTCAT+TGG 0.280186 3.1:+24551911 MS.gene000032:CDS
TTCTTGCATCCACTATATTA+TGG 0.285971 3.1:+24551812 MS.gene000032:CDS
TCTTCAATCTTATCAGAGTT+TGG 0.311629 3.1:-24551449 None:intergenic
ACCCAAAGTCTTCTGCATAT+TGG 0.333496 3.1:+24553998 MS.gene000032:CDS
GTGGCTATATGTTGTTCCTT+GGG 0.339471 3.1:+24552261 MS.gene000032:CDS
GTGGTAGAGGTCCTAGTATA+TGG 0.341211 3.1:+24548674 MS.gene000032:CDS
TGATGATGTGCTGCTAAGTA+TGG 0.341542 3.1:-24551119 None:intergenic
ACCAATATGCAGAAGACTTT+GGG 0.355117 3.1:-24553999 None:intergenic
AGTCGCCACTTCTGCTTATC+AGG 0.367564 3.1:+24547875 MS.gene000032:CDS
TCATCTAGCATCTCATTTAG+TGG 0.371886 3.1:-24553070 None:intergenic
TGCTTATTTCTATAGATAGA+AGG 0.374326 3.1:+24548637 MS.gene000032:intron
AGTGGCTATATGTTGTTCCT+TGG 0.380075 3.1:+24552260 MS.gene000032:CDS
CCATTCTCGGTGACATATAT+CGG 0.385270 3.1:-24552328 None:intergenic
TTCCCATCTGACTTCGTCTT+CGG 0.391457 3.1:+24547852 MS.gene000032:CDS
TGATCATTATCATCGTTATA+AGG 0.400828 3.1:+24548837 MS.gene000032:CDS
ATAGACCAATCCGAAGAGTT+TGG 0.401019 3.1:-24553947 None:intergenic
TTATCCTCCTCCGAGAATTT+GGG 0.401648 3.1:-24551878 None:intergenic
ATGTTGTTCCTTGGGGTCTT+CGG 0.421588 3.1:+24552269 MS.gene000032:CDS
AGAAAGTCACATACCATTCT+CGG 0.427765 3.1:-24552341 None:intergenic
ACCCACCAACTGCGGTTTGA+AGG 0.428874 3.1:-24551046 None:intergenic
GGCTGGTTGTAGACTCTGAA+TGG 0.429555 3.1:+24551420 MS.gene000032:CDS
CCGATATATGTCACCGAGAA+TGG 0.434496 3.1:+24552328 MS.gene000032:CDS
GTTTGACCTTGTACTTGCTT+CGG 0.440391 3.1:-24551175 None:intergenic
GAAGAATTCATGAGAGAAAA+CGG 0.444289 3.1:+24547792 MS.gene000032:CDS
TATTGATCTTATAGCCAAGT+TGG 0.446830 3.1:+24549247 MS.gene000032:CDS
AACCAATATGCAGAAGACTT+TGG 0.453110 3.1:-24554000 None:intergenic
GCACAACAGCTGGACAGAAT+TGG 0.456329 3.1:+24552004 MS.gene000032:CDS
GCTAGCAAGGAGGGTGGTAG+AGG 0.457690 3.1:+24548661 MS.gene000032:CDS
AGTCGTTCACGCATAACTTC+AGG 0.457789 3.1:-24551842 None:intergenic
ATTGATCTTATAGCCAAGTT+GGG 0.461829 3.1:+24549248 MS.gene000032:CDS
CCCCTTCAAACCGCAGTTGG+TGG 0.465082 3.1:+24551044 MS.gene000032:CDS
CTTGTCGTAATGACATTCTT+CGG 0.465885 3.1:-24551981 None:intergenic
AGCAGCACATCATCAAATCT+TGG 0.471284 3.1:+24551127 MS.gene000032:CDS
AGACCGACTTCCCAAATTCT+CGG 0.471407 3.1:+24551868 MS.gene000032:CDS
TGGGAAGGCGGGGAGCTCAT+TGG 0.475634 3.1:+24552113 MS.gene000032:CDS
ACTGCATCTTGATGAGTCAA+TGG 0.476677 3.1:+24550590 MS.gene000032:CDS
TTTCGCGGTTTCTTAAAGAT+GGG 0.480453 3.1:+24554022 MS.gene000032:CDS
TTACGACAAGGCACAACAGC+TGG 0.483666 3.1:+24551994 MS.gene000032:CDS
GCATAGGCATCCCATATACT+AGG 0.491716 3.1:-24548685 None:intergenic
CAAGGTTATACCAAACTCTT+CGG 0.493583 3.1:+24553937 MS.gene000032:CDS
TTTATGGGTGTAGATGGCTT+AGG 0.494310 3.1:+24550384 MS.gene000032:intron
CCCACCAACTGCGGTTTGAA+GGG 0.498031 3.1:-24551045 None:intergenic
ACCAGCCAAGACGAAAATCT+AGG 0.501744 3.1:-24551493 None:intergenic
AGAGAAAACGGCTTTGAGAA+AGG 0.503990 3.1:+24547804 MS.gene000032:CDS
CTCCGAAGACGAAGTCAGAT+GGG 0.505333 3.1:-24547854 None:intergenic
TAAAGATGGGGCAAACAAGA+AGG 0.505631 3.1:+24554035 MS.gene000032:CDS
GGAACCAATGTCAATGATGA+AGG 0.509270 3.1:+24550405 MS.gene000032:CDS
CACAGTTGAATGGGAAGGCG+GGG 0.517438 3.1:+24552103 MS.gene000032:intron
ATTACTTGACAACTTCGAAT+GGG 0.517605 3.1:+24553912 MS.gene000032:CDS
CTGCATCTTGATGAGTCAAT+GGG 0.519946 3.1:+24550591 MS.gene000032:CDS
GGATAGTCTCCATAATATAG+TGG 0.522297 3.1:-24551821 None:intergenic
GAAGTTATGCGTGAACGACT+TGG 0.522922 3.1:+24551845 MS.gene000032:CDS
CAATGGTACAAAGTTGCAAA+AGG 0.523074 3.1:-24550558 None:intergenic
GCTGGTTGTAGACTCTGAAT+GGG 0.524122 3.1:+24551421 MS.gene000032:CDS
ACTCCGAAGACGAAGTCAGA+TGG 0.526721 3.1:-24547855 None:intergenic
ATAGATAGAAGGTGCTAGCA+AGG 0.527398 3.1:+24548648 MS.gene000032:intron
TATTTACCGAAGCAAGTACA+AGG 0.527429 3.1:+24551169 MS.gene000032:CDS
TCACAGTTGAATGGGAAGGC+GGG 0.530118 3.1:+24552102 MS.gene000032:intron
CCCTTCAAACCGCAGTTGGT+GGG 0.530206 3.1:+24551045 MS.gene000032:CDS
ATACCTTGCATCACTTGTGC+AGG 0.530616 3.1:+24553120 MS.gene000032:CDS
TTATACCAAACTCTTCGGAT+TGG 0.537847 3.1:+24553942 MS.gene000032:CDS
CATTACTTGACAACTTCGAA+TGG 0.539797 3.1:+24553911 MS.gene000032:CDS
TGGTAGAGGTCCTAGTATAT+GGG 0.543561 3.1:+24548675 MS.gene000032:CDS
GATGCTGGAGTTAATGCTCC+TGG 0.547337 3.1:+24551071 MS.gene000032:CDS
ATAGAAGGTGCTAGCAAGGA+GGG 0.552629 3.1:+24548652 MS.gene000032:CDS
AAATAGAAACAGCTTCTGCA+TGG 0.554274 3.1:-24551151 None:intergenic
GCAGTTGGTGGGTATGATGC+TGG 0.554523 3.1:+24551056 MS.gene000032:CDS
CGGGGAGCTCATTGGTGAGA+AGG 0.559264 3.1:+24552121 MS.gene000032:CDS
TGGCTATATGTTGTTCCTTG+GGG 0.561938 3.1:+24552262 MS.gene000032:CDS
CTGCGAGTTCGCTATTACAA+GGG 0.562943 3.1:+24553097 MS.gene000032:CDS
GACAACTTCGAATGGGCTCA+AGG 0.563677 3.1:+24553919 MS.gene000032:CDS
ACTGCGAGTTCGCTATTACA+AGG 0.565427 3.1:+24553096 MS.gene000032:CDS
TATGCCTTCATCATTGACAT+TGG 0.565847 3.1:-24550409 None:intergenic
ATCTAGGTGTCTCGCAGCAG+CGG 0.565847 3.1:-24551477 None:intergenic
CCTCCGAGAATTTGGGAAGT+CGG 0.566416 3.1:-24551871 None:intergenic
TTCACAGTTGAATGGGAAGG+CGG 0.576115 3.1:+24552101 MS.gene000032:intron
TTCGCGGTTTCTTAAAGATG+GGG 0.576695 3.1:+24554023 MS.gene000032:CDS
GTACGCGTTGAAACCCAACT+TGG 0.588904 3.1:-24549261 None:intergenic
GATGCCTATGCTTATACTGA+AGG 0.593156 3.1:+24548697 MS.gene000032:CDS
GAGCCCCTTCAAACCGCAGT+TGG 0.595137 3.1:+24551041 MS.gene000032:CDS
AAGTACCTGATAAGCAGAAG+TGG 0.596695 3.1:-24547880 None:intergenic
AAAGATGGGGCAAACAAGAA+GGG 0.597402 3.1:+24554036 MS.gene000032:CDS
ACTTCCCAAATTCTCGGAGG+AGG 0.598018 3.1:+24551874 MS.gene000032:CDS
AATAGAAACAGCTTCTGCAT+GGG 0.599937 3.1:-24551150 None:intergenic
CCACCAACTGCGGTTTGAAG+GGG 0.600742 3.1:-24551044 None:intergenic
AAAATACTCGACAAAAGCAA+TGG 0.611643 3.1:+24548802 MS.gene000032:CDS
ATTGACTCATCAAGATGCAG+TGG 0.618454 3.1:-24550588 None:intergenic
TGATGTTCCAGGATAAGCAA+GGG 0.620122 3.1:+24551387 MS.gene000032:intron
AGGGATGGAGCTGATGTGAG+AGG 0.625962 3.1:+24553874 MS.gene000032:intron
CATACCTTCAGTATAAGCAT+AGG 0.630354 3.1:-24548701 None:intergenic
TTGATGTTCCAGGATAAGCA+AGG 0.633558 3.1:+24551386 MS.gene000032:intron
ATGTGAGAGGACACTTTGCA+TGG 0.634153 3.1:+24553887 MS.gene000032:CDS
ATAATCTTCCGAAGACCCCA+AGG 0.634887 3.1:-24552277 None:intergenic
TTGATGAGTCAATGGGAGGA+TGG 0.652779 3.1:+24550598 MS.gene000032:CDS
TAGCCTGCACAAGTGATGCA+AGG 0.652910 3.1:-24553123 None:intergenic
CGAAGAATGTCATTACGACA+AGG 0.654678 3.1:+24551982 MS.gene000032:CDS
GATAGAAGGTGCTAGCAAGG+AGG 0.656517 3.1:+24548651 MS.gene000032:intron
GATGTTCCAGGATAAGCAAG+GGG 0.676059 3.1:+24551388 MS.gene000032:intron
GAAGGTGCTAGCAAGGAGGG+TGG 0.683982 3.1:+24548655 MS.gene000032:CDS
AGCATCATACCCACCAACTG+CGG 0.685967 3.1:-24551054 None:intergenic
CATCTTGATGAGTCAATGGG+AGG 0.710481 3.1:+24550594 MS.gene000032:CDS
TATAACAGGCAGCATCAGAG+TGG 0.713683 3.1:+24552242 MS.gene000032:intron
GATGCAGTGGAAGATCCCAA+TGG 0.714924 3.1:-24550575 None:intergenic
CCGACTTCCCAAATTCTCGG+AGG 0.756560 3.1:+24551871 MS.gene000032:CDS
ATGTTCCAGGATAAGCAAGG+GGG 0.760256 3.1:+24551389 MS.gene000032:intron
GCCTAAATCACTATACAACG+AGG 0.773876 3.1:+24551933 MS.gene000032:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAGAATAAAAAAAAAATTA+AGG + chr3.1:24553700-24553719 MS.gene000032:intron 10.0%
!! ATATTTATCAAAAAATTTAG+AGG - chr3.1:24550861-24550880 None:intergenic 10.0%
!! GAGAATAAAAAAAAAATTAA+GGG + chr3.1:24553701-24553720 MS.gene000032:intron 10.0%
!! TAACAAATTAAATATATACT+TGG - chr3.1:24550828-24550847 None:intergenic 10.0%
!!! GTATATATTTAATTTGTTAT+TGG + chr3.1:24550829-24550848 MS.gene000032:intron 10.0%
!! TAATATAAAAACGAAGTATA+TGG + chr3.1:24553473-24553492 MS.gene000032:intron 15.0%
!! TAGAAGAGATAAAAATATTA+AGG - chr3.1:24550500-24550519 None:intergenic 15.0%
!! TATAAAACAAATGTATGTAT+AGG - chr3.1:24551523-24551542 None:intergenic 15.0%
!! TATATTAATAAACGATAGAA+GGG - chr3.1:24552651-24552670 None:intergenic 15.0%
!! TATGTAAAACCTAAAAATAA+TGG - chr3.1:24550262-24550281 None:intergenic 15.0%
!!! AAAATTTCTTTTGAATTCTT+TGG + chr3.1:24551901-24551920 MS.gene000032:CDS 15.0%
!!! AAGACTTTCAATATTTTAAA+AGG + chr3.1:24548032-24548051 MS.gene000032:intron 15.0%
!!! ATTAACTTTTACAAAAGTAT+AGG - chr3.1:24548504-24548523 None:intergenic 15.0%
!!! ATTATATTGCAATGTTTTAT+GGG + chr3.1:24550369-24550388 MS.gene000032:intron 15.0%
!!! GTTTTTCAAATTTTAAAGAT+AGG + chr3.1:24549585-24549604 MS.gene000032:intron 15.0%
!!! TATTATATTGCAATGTTTTA+TGG + chr3.1:24550368-24550387 MS.gene000032:intron 15.0%
!! ATAAATGTAATCTAACAAGT+AGG - chr3.1:24551213-24551232 None:intergenic 20.0%
!! ATAGTTAATATTTGCATCTT+CGG + chr3.1:24549451-24549470 MS.gene000032:intron 20.0%
!! ATATTAATAAACGATAGAAG+GGG - chr3.1:24552650-24552669 None:intergenic 20.0%
!! CAAATGATTTACAAAACTTT+AGG - chr3.1:24553847-24553866 None:intergenic 20.0%
!! CGATAATTTGAAAAATAAAC+TGG - chr3.1:24553200-24553219 None:intergenic 20.0%
!! CTTAAAAATAGACTCAATAT+GGG - chr3.1:24549091-24549110 None:intergenic 20.0%
!! GTATATTAATAAACGATAGA+AGG - chr3.1:24552652-24552671 None:intergenic 20.0%
!! GTTGAATAAAAAAATCATGT+AGG + chr3.1:24550753-24550772 MS.gene000032:intron 20.0%
!! GTTGAATAAAAATATCATGT+AGG + chr3.1:24550620-24550639 MS.gene000032:intron 20.0%
!! GTTGATTATTTATTACTTTG+TGG + chr3.1:24548244-24548263 MS.gene000032:intron 20.0%
!! TATCAAAAAATTTAGAGGTA+AGG - chr3.1:24550856-24550875 None:intergenic 20.0%
!! TGGGAAATGATTAATATATA+TGG - chr3.1:24550527-24550546 None:intergenic 20.0%
!! TTAAAAATAGACTCAATATG+GGG - chr3.1:24549090-24549109 None:intergenic 20.0%
!!! AACCTAAAAATAATGGTTTT+AGG - chr3.1:24550255-24550274 None:intergenic 20.0%
!!! ACCTAAAAATAATGGTTTTA+GGG - chr3.1:24550254-24550273 None:intergenic 20.0%
!!! ATAAACAGATTTTATATGAC+TGG + chr3.1:24552962-24552981 MS.gene000032:intron 20.0%
!!! CTTACATTAATATGTTGATT+TGG + chr3.1:24550302-24550321 MS.gene000032:intron 20.0%
!!! TAAGTAGTGGATAATTAATT+TGG - chr3.1:24550074-24550093 None:intergenic 20.0%
!!! TAATTAATTTGGTAAAGGTT+TGG - chr3.1:24550063-24550082 None:intergenic 20.0%
!!! TTACTATTTTTGTGTTGTTT+TGG + chr3.1:24548774-24548793 MS.gene000032:intron 20.0%
!!! TTCAATGTTTTTAAGCAAAT+AGG - chr3.1:24553600-24553619 None:intergenic 20.0%
!!! TTTTTACTTTACCATCTTAT+CGG - chr3.1:24549554-24549573 None:intergenic 20.0%
! AAATCATGTATAGATCAGAA+AGG - chr3.1:24553675-24553694 None:intergenic 25.0%
! AAATGGTTCTCGTATTTATA+AGG + chr3.1:24552999-24553018 MS.gene000032:intron 25.0%
! AATTGGCATACACAATATTT+AGG - chr3.1:24548883-24548902 None:intergenic 25.0%
! AATTTCGAGATCAAGATAAA+TGG - chr3.1:24548213-24548232 None:intergenic 25.0%
! AGAATATAAACTTGCATCTT+TGG - chr3.1:24552215-24552234 None:intergenic 25.0%
! AGCAAAATAAAAAAGAAGCA+GGG + chr3.1:24549733-24549752 MS.gene000032:intron 25.0%
! AGTTAGAAACAATACATAAC+AGG - chr3.1:24552685-24552704 None:intergenic 25.0%
! ATATATTAATCATTTCCCAC+AGG + chr3.1:24550528-24550547 MS.gene000032:intron 25.0%
! ATATTCTATGTGCATATAAC+AGG + chr3.1:24552228-24552247 MS.gene000032:intron 25.0%
! ATCACTAATAAAACATACCA+GGG - chr3.1:24549316-24549335 None:intergenic 25.0%
! ATTAAACTCAAAACAGCAAA+AGG + chr3.1:24551685-24551704 MS.gene000032:intron 25.0%
! CAATACATAACAGGATAAAT+TGG - chr3.1:24552676-24552695 None:intergenic 25.0%
! CAATGAGAACAAAACATAAA+AGG - chr3.1:24552508-24552527 None:intergenic 25.0%
! GATAGAATATATTCTTAACC+AGG + chr3.1:24551789-24551808 MS.gene000032:intron 25.0%
! GATGGTAAAGTAAAAAAGAT+AGG + chr3.1:24549558-24549577 MS.gene000032:intron 25.0%
! GCTTAAAAATAGACTCAATA+TGG - chr3.1:24549092-24549111 None:intergenic 25.0%
! GTCTATGTAGATTACAAAAA+TGG + chr3.1:24553964-24553983 MS.gene000032:CDS 25.0%
! GTTTCAGAGAAAAATTAACT+CGG - chr3.1:24548607-24548626 None:intergenic 25.0%
! TAAAAATATTAAGGCAAAGC+AGG - chr3.1:24550491-24550510 None:intergenic 25.0%
! TAAAGTAAAAAAGATAGGAG+AGG + chr3.1:24549563-24549582 MS.gene000032:intron 25.0%
! TAGCAAAATAAAAAAGAAGC+AGG + chr3.1:24549732-24549751 MS.gene000032:intron 25.0%
! TATATCAAGTGGAAAATCTA+TGG - chr3.1:24551567-24551586 None:intergenic 25.0%
! TATGAATAGAGAGAATTGAA+TGG + chr3.1:24553225-24553244 MS.gene000032:intron 25.0%
! TCGTGAACTATAAAAAAGAA+CGG + chr3.1:24552759-24552778 MS.gene000032:intron 25.0%
! TGAAAATATATTCTTCGAGT+AGG - chr3.1:24551268-24551287 None:intergenic 25.0%
! TGATCATTATCATCGTTATA+AGG + chr3.1:24548837-24548856 MS.gene000032:CDS 25.0%
! TGCATTCAGTAATAGAATAT+TGG - chr3.1:24550921-24550940 None:intergenic 25.0%
! TGTTTACAACAGATGATTAA+AGG + chr3.1:24549486-24549505 MS.gene000032:intron 25.0%
! TTTAAAAGGTCAAATACATC+CGG + chr3.1:24548046-24548065 MS.gene000032:intron 25.0%
!! AAACATTGAAAGTTTAGAAC+AGG + chr3.1:24553610-24553629 MS.gene000032:intron 25.0%
!! AACATTGAAAGTTTAGAACA+GGG + chr3.1:24553611-24553630 MS.gene000032:intron 25.0%
!! AAGGCTTTTATGATTTTCAA+TGG - chr3.1:24553656-24553675 None:intergenic 25.0%
!! AGAACCATTTTATAAAGTTC+TGG - chr3.1:24552989-24553008 None:intergenic 25.0%
!! AGGAAAAAAGTGATACATTT+TGG - chr3.1:24552551-24552570 None:intergenic 25.0%
!! ATATTTTCAATCATCCTACA+TGG + chr3.1:24551279-24551298 MS.gene000032:intron 25.0%
!! GTAAGAAAAGTGATACATTT+TGG - chr3.1:24552620-24552639 None:intergenic 25.0%
!! GTGGATAATTAATTTGGTAA+AGG - chr3.1:24550068-24550087 None:intergenic 25.0%
!!! AGTGCAATTTTTTTATACAG+TGG + chr3.1:24549662-24549681 MS.gene000032:intron 25.0%
!!! CCACTTTTAGAAAACAAATA+GGG + chr3.1:24552376-24552395 MS.gene000032:intron 25.0%
!!! CTTTGTTATAGTTGTTTTTG+TGG + chr3.1:24548318-24548337 MS.gene000032:intron 25.0%
!!! CTTTTATGTTTTGTTCTCAT+TGG + chr3.1:24552506-24552525 MS.gene000032:intron 25.0%
!!! GTGCAATTTTTTTATACAGT+GGG + chr3.1:24549663-24549682 MS.gene000032:intron 25.0%
!!! TATTTTTGTGTTGTTTTGGT+AGG + chr3.1:24548778-24548797 MS.gene000032:intron 25.0%
!!! TCAAATTTTAAAGATAGGAG+AGG + chr3.1:24549590-24549609 MS.gene000032:intron 25.0%
!!! TCCACTTTTAGAAAACAAAT+AGG + chr3.1:24552375-24552394 MS.gene000032:intron 25.0%
!!! TCCCTAAAACCATTATTTTT+AGG + chr3.1:24550250-24550269 MS.gene000032:intron 25.0%
!!! TGCAATTTTTTTATACAGTG+GGG + chr3.1:24549664-24549683 MS.gene000032:intron 25.0%
!!! TGCTTATTTCTATAGATAGA+AGG + chr3.1:24548637-24548656 MS.gene000032:intron 25.0%
!!! TTTTGGCTTTACATAAATAC+TGG - chr3.1:24552534-24552553 None:intergenic 25.0%
AAAATACTCGACAAAAGCAA+TGG + chr3.1:24548802-24548821 MS.gene000032:CDS 30.0%
AACGTTAAACATAAAGACTC+CGG - chr3.1:24548068-24548087 None:intergenic 30.0%
AAGTATTAAAGGTTATGACG+TGG + chr3.1:24550731-24550750 MS.gene000032:intron 30.0%
AATCCTGATTAGATAGCATA+AGG + chr3.1:24552892-24552911 MS.gene000032:intron 30.0%
ACATTACATATCCTTTCCTA+TGG - chr3.1:24549774-24549793 None:intergenic 30.0%
AGAACGGAAATATGTGTAAA+TGG + chr3.1:24552775-24552794 MS.gene000032:intron 30.0%
ATCAATGCTCTTCTTGAAAA+AGG + chr3.1:24550450-24550469 MS.gene000032:CDS 30.0%
ATTACTTGACAACTTCGAAT+GGG + chr3.1:24553912-24553931 MS.gene000032:CDS 30.0%
ATTAGAAACATAGAAAACCG+TGG - chr3.1:24548462-24548481 None:intergenic 30.0%
ATTGATCTTATAGCCAAGTT+GGG + chr3.1:24549248-24549267 MS.gene000032:CDS 30.0%
CATCACTAATAAAACATACC+AGG - chr3.1:24549317-24549336 None:intergenic 30.0%
CTTAATGTAACTATGTGAAC+AGG + chr3.1:24549220-24549239 MS.gene000032:intron 30.0%
CTTCATGCATTTATATCAAG+TGG - chr3.1:24551578-24551597 None:intergenic 30.0%
GAAAATAGAACAGAACATGT+AGG - chr3.1:24552571-24552590 None:intergenic 30.0%
GAAGAATTCATGAGAGAAAA+CGG + chr3.1:24547792-24547811 MS.gene000032:CDS 30.0%
GTAAATCATTTGAATGCACA+GGG + chr3.1:24553855-24553874 MS.gene000032:intron 30.0%
GTTGAAGATATGTCAACAAT+AGG + chr3.1:24552914-24552933 MS.gene000032:intron 30.0%
TAAACTCTGCACAAGAAATA+TGG + chr3.1:24549933-24549952 MS.gene000032:intron 30.0%
TAATCTTTGCTTAGCTGATA+TGG + chr3.1:24553438-24553457 MS.gene000032:intron 30.0%
TACCAATACCATTACTCATT+CGG - chr3.1:24548569-24548588 None:intergenic 30.0%
TATAAATGCATGAAGATGTG+TGG + chr3.1:24551583-24551602 MS.gene000032:intron 30.0%
TATTGATCTTATAGCCAAGT+TGG + chr3.1:24549247-24549266 MS.gene000032:CDS 30.0%
TATTTCTTGTGCAGAGTTTA+CGG - chr3.1:24549933-24549952 None:intergenic 30.0%
TCTTCAATCTTATCAGAGTT+TGG - chr3.1:24551452-24551471 None:intergenic 30.0%
TGACAGACATATGCATAATA+AGG - chr3.1:24553517-24553536 None:intergenic 30.0%
TGAGAACAAAACATAAAAGG+CGG - chr3.1:24552505-24552524 None:intergenic 30.0%
TGGACCAGAACTTTATAAAA+TGG + chr3.1:24552982-24553001 MS.gene000032:intron 30.0%
TGTAAATCATTTGAATGCAC+AGG + chr3.1:24553854-24553873 MS.gene000032:intron 30.0%
TTATGTTATATGGCTCAACA+AGG + chr3.1:24552809-24552828 MS.gene000032:intron 30.0%
TTCTTGCATCCACTATATTA+TGG + chr3.1:24551812-24551831 MS.gene000032:CDS 30.0%
TTGAATTCTTTGGACTTCAT+TGG + chr3.1:24551911-24551930 MS.gene000032:CDS 30.0%
TTGATAAACTTCTAGGCTTA+AGG - chr3.1:24549406-24549425 None:intergenic 30.0%
TTTGAATCTTCTGTAGTGTT+TGG + chr3.1:24552456-24552475 MS.gene000032:intron 30.0%
! AACAAGTTGTTGGCTAATAT+AGG + chr3.1:24549870-24549889 MS.gene000032:intron 30.0%
! ATTACAAAAATGGACTCACT+AGG + chr3.1:24553974-24553993 MS.gene000032:CDS 30.0%
! ATTAGCCAACAACTTGTTTA+AGG - chr3.1:24549868-24549887 None:intergenic 30.0%
! CAAGATTGCTAAATGTTTTG+AGG + chr3.1:24550206-24550225 MS.gene000032:intron 30.0%
! CGTACAGATTTTCAATTTCT+TGG + chr3.1:24549279-24549298 MS.gene000032:CDS 30.0%
! GAAGTTCAAACGATTTTACT+CGG - chr3.1:24553794-24553813 None:intergenic 30.0%
! GCGTAAATTAAGTCTTTTCT+GGG + chr3.1:24549508-24549527 MS.gene000032:intron 30.0%
! TAAATTAAGTCTTTTCTGGG+AGG + chr3.1:24549511-24549530 MS.gene000032:intron 30.0%
! TAACTTGTCTCTCAAATGAA+TGG + chr3.1:24552700-24552719 MS.gene000032:intron 30.0%
! TACATTTTTGCGTTTAACGT+TGG + chr3.1:24551629-24551648 MS.gene000032:intron 30.0%
! TAGTAAGTAATGAAGCATCA+AGG - chr3.1:24548760-24548779 None:intergenic 30.0%
! TTAGCCAACAACTTGTTTAA+GGG - chr3.1:24549867-24549886 None:intergenic 30.0%
! TTTTGCAACTTTGTACCATT+GGG + chr3.1:24550560-24550579 MS.gene000032:CDS 30.0%
!! AAATTAAGTCTTTTCTGGGA+GGG + chr3.1:24549512-24549531 MS.gene000032:intron 30.0%
!! AGTCTTGTTATATGCATCTT+TGG - chr3.1:24548407-24548426 None:intergenic 30.0%
!! CCCTATTTGTTTTCTAAAAG+TGG - chr3.1:24552379-24552398 None:intergenic 30.0%
!! GATGTGCTTGAAAGTATTAA+AGG + chr3.1:24550720-24550739 MS.gene000032:intron 30.0%
!! GCATTTAAATGTTGCTTTAC+AGG + chr3.1:24549047-24549066 MS.gene000032:intron 30.0%
!! TTGTCTTTCTGGATTGATTT+TGG + chr3.1:24549007-24549026 MS.gene000032:intron 30.0%
!! TTTTCTAAAAGTGGACAAGA+AGG - chr3.1:24552370-24552389 None:intergenic 30.0%
!!! AAATAATGGTTTTAGGGACA+AGG - chr3.1:24550248-24550267 None:intergenic 30.0%
!!! AATTTTTTTATACAGTGGGG+AGG + chr3.1:24549667-24549686 MS.gene000032:intron 30.0%
!!! ACATTTTGGTTCTACACAAA+TGG - chr3.1:24552606-24552625 None:intergenic 30.0%
!!! CATTTTGGTTCTACACAAAT+GGG - chr3.1:24552605-24552624 None:intergenic 30.0%
!!! TTGATGCTTTTTCGATGATT+TGG + chr3.1:24547960-24547979 MS.gene000032:intron 30.0%
AAAAATGTGACACACACTAC+TGG + chr3.1:24549827-24549846 MS.gene000032:intron 35.0%
AAACATAGAAAACCGTGGAT+AGG - chr3.1:24548457-24548476 None:intergenic 35.0%
AAAGACCAATGCTAGACAAT+TGG - chr3.1:24548900-24548919 None:intergenic 35.0%
AAATAGAAACAGCTTCTGCA+TGG - chr3.1:24551154-24551173 None:intergenic 35.0%
AACCAATATGCAGAAGACTT+TGG - chr3.1:24554003-24554022 None:intergenic 35.0%
AACCACTCGATAGAAAATTG+AGG + chr3.1:24552403-24552422 MS.gene000032:intron 35.0%
AATAGAAACAGCTTCTGCAT+GGG - chr3.1:24551153-24551172 None:intergenic 35.0%
ACACTAGAAATTGAAGGTTG+AGG + chr3.1:24551734-24551753 MS.gene000032:intron 35.0%
ACCAATACCATTACTCATTC+GGG - chr3.1:24548568-24548587 None:intergenic 35.0%
ACCAATATGCAGAAGACTTT+GGG - chr3.1:24554002-24554021 None:intergenic 35.0%
ACCACTCGATAGAAAATTGA+GGG + chr3.1:24552404-24552423 MS.gene000032:intron 35.0%
ACCTCGTTGTATAGTGATTT+AGG - chr3.1:24551937-24551956 None:intergenic 35.0%
ACTAACAGACTTAAACCATC+CGG + chr3.1:24550016-24550035 MS.gene000032:intron 35.0%
AGAAAGTCACATACCATTCT+CGG - chr3.1:24552344-24552363 None:intergenic 35.0%
AGCACAATTTGAGCAAATTG+AGG - chr3.1:24548737-24548756 None:intergenic 35.0%
AGCTTGAAATTTGAACTGTC+GGG + chr3.1:24548169-24548188 MS.gene000032:intron 35.0%
AGGTATCATCTAACTGAGTA+TGG + chr3.1:24550773-24550792 MS.gene000032:intron 35.0%
AGGTTGAGGATATTTAACCT+TGG + chr3.1:24551748-24551767 MS.gene000032:intron 35.0%
ATTCTAACTAACCTGCTACA+TGG + chr3.1:24550112-24550131 MS.gene000032:intron 35.0%
CAACCTTATGCTATCTAATC+AGG - chr3.1:24552898-24552917 None:intergenic 35.0%
CAAGGTTATACCAAACTCTT+CGG + chr3.1:24553937-24553956 MS.gene000032:CDS 35.0%
CAATGGTACAAAGTTGCAAA+AGG - chr3.1:24550561-24550580 None:intergenic 35.0%
CACAAAAATCTTTCCTCACT+TGG - chr3.1:24548977-24548996 None:intergenic 35.0%
CATACCTTCAGTATAAGCAT+AGG - chr3.1:24548704-24548723 None:intergenic 35.0%
CATCATCCATACCTGTTAAA+TGG - chr3.1:24553033-24553052 None:intergenic 35.0%
CATTACTTGACAACTTCGAA+TGG + chr3.1:24553911-24553930 MS.gene000032:CDS 35.0%
CGAGTGTGAGTTATGTTATA+TGG + chr3.1:24552799-24552818 MS.gene000032:intron 35.0%
CTTGTCGTAATGACATTCTT+CGG - chr3.1:24551984-24552003 None:intergenic 35.0%
CTTTATTCTCTTGATGTTCC+AGG + chr3.1:24551376-24551395 MS.gene000032:intron 35.0%
GAAAAACAGCTCAATCATCA+AGG - chr3.1:24552084-24552103 None:intergenic 35.0%
GAGCTTGAAATTTGAACTGT+CGG + chr3.1:24548168-24548187 MS.gene000032:intron 35.0%
GCTTATCATGTGTAACAAAC+AGG + chr3.1:24553318-24553337 MS.gene000032:intron 35.0%
GGATAGTCTCCATAATATAG+TGG - chr3.1:24551824-24551843 None:intergenic 35.0%
GGTTGTACATATTGTCTTTC+TGG + chr3.1:24548996-24549015 MS.gene000032:intron 35.0%
GTCTTTCCATTTAACAGGTA+TGG + chr3.1:24553024-24553043 MS.gene000032:intron 35.0%
TAAGACTTGCACAATAGTTG+AGG + chr3.1:24551348-24551367 MS.gene000032:intron 35.0%
TACTTTACCATCTTATCGGT+TGG - chr3.1:24549550-24549569 None:intergenic 35.0%
TATGCCTTCATCATTGACAT+TGG - chr3.1:24550412-24550431 None:intergenic 35.0%
TATGTGAACGATGTAAGTAG+TGG - chr3.1:24550087-24550106 None:intergenic 35.0%
TATTTACCGAAGCAAGTACA+AGG + chr3.1:24551169-24551188 MS.gene000032:CDS 35.0%
TCATCTAGCATCTCATTTAG+TGG - chr3.1:24553073-24553092 None:intergenic 35.0%
TCGTGAACACTAGAAATTGA+AGG + chr3.1:24551728-24551747 MS.gene000032:intron 35.0%
TTATACCAAACTCTTCGGAT+TGG + chr3.1:24553942-24553961 MS.gene000032:CDS 35.0%
TTTCGCGGTTTCTTAAAGAT+GGG + chr3.1:24554022-24554041 MS.gene000032:CDS 35.0%
! ACTTTACCATCTTATCGGTT+GGG - chr3.1:24549549-24549568 None:intergenic 35.0%
! ATGTAGCAGGTTAGTTAGAA+TGG - chr3.1:24550113-24550132 None:intergenic 35.0%
! CAAGTGAGGAAAGATTTTTG+TGG + chr3.1:24548975-24548994 MS.gene000032:intron 35.0%
! CAATGTTTTATGGGTGTAGA+TGG + chr3.1:24550378-24550397 MS.gene000032:intron 35.0%
! CTTTTGCAACTTTGTACCAT+TGG + chr3.1:24550559-24550578 MS.gene000032:CDS 35.0%
! GATACTTGCTTTGCAAGTTT+TGG + chr3.1:24550987-24551006 MS.gene000032:CDS 35.0%
! GATCTATTTTCACTTCTTCC+AGG - chr3.1:24551092-24551111 None:intergenic 35.0%
! GGCGTAAATTAAGTCTTTTC+TGG + chr3.1:24549507-24549526 MS.gene000032:intron 35.0%
! GTGTTATTCTAACCTATCCA+CGG + chr3.1:24548442-24548461 MS.gene000032:intron 35.0%
! TAGCCAACAACTTGTTTAAG+GGG - chr3.1:24549866-24549885 None:intergenic 35.0%
! TGTAGCAGGTTAGTTAGAAT+GGG - chr3.1:24550112-24550131 None:intergenic 35.0%
! TTGTTGGCTAATATAGGAGA+TGG + chr3.1:24549876-24549895 MS.gene000032:intron 35.0%
! TTTTCGCGGTTTCTTAAAGA+TGG + chr3.1:24554021-24554040 MS.gene000032:CDS 35.0%
! TTTTTCACAGTTGAATGGGA+AGG + chr3.1:24552098-24552117 MS.gene000032:intron 35.0%
!! AGAGGAGTTGATAAACTTCT+AGG - chr3.1:24549413-24549432 None:intergenic 35.0%
!! GAATGAGTAATGGTATTGGT+AGG + chr3.1:24548568-24548587 MS.gene000032:intron 35.0%
!!! AGCTGTTTTTCACAGTTGAA+TGG + chr3.1:24552093-24552112 MS.gene000032:intron 35.0%
!!! GCTGTTTTTCACAGTTGAAT+GGG + chr3.1:24552094-24552113 MS.gene000032:intron 35.0%
AAAAGAAGCAGGGAATACAC+AGG + chr3.1:24549743-24549762 MS.gene000032:intron 40.0%
AAACGATAGAAGGGGACAAA+AGG - chr3.1:24552642-24552661 None:intergenic 40.0%
AAAGATGGGGCAAACAAGAA+GGG + chr3.1:24554036-24554055 MS.gene000032:CDS 40.0%
AAATTGCACTCTCTCCTATC+TGG - chr3.1:24549652-24549671 None:intergenic 40.0%
AACTCTGTAGTGTGAGAGTA+TGG - chr3.1:24550160-24550179 None:intergenic 40.0%
AAGTACCTGATAAGCAGAAG+TGG - chr3.1:24547883-24547902 None:intergenic 40.0%
AATGAGAGTAGTTGCCATGT+AGG - chr3.1:24551296-24551315 None:intergenic 40.0%
ACCCAAAGTCTTCTGCATAT+TGG + chr3.1:24553998-24554017 MS.gene000032:CDS 40.0%
ACTCCTCTGTCATCAATACT+TGG + chr3.1:24549425-24549444 MS.gene000032:intron 40.0%
ACTCGGTCAGTTGTTATGTT+AGG - chr3.1:24553777-24553796 None:intergenic 40.0%
ACTGCATCTTGATGAGTCAA+TGG + chr3.1:24550590-24550609 MS.gene000032:CDS 40.0%
AGCAGCACATCATCAAATCT+TGG + chr3.1:24551127-24551146 MS.gene000032:CDS 40.0%
AGGCTGTCTTTCCATTTAAC+AGG + chr3.1:24553019-24553038 MS.gene000032:intron 40.0%
AGGTGTGTGTGAGAAGAAAA+TGG - chr3.1:24553162-24553181 None:intergenic 40.0%
AGTGGCTATATGTTGTTCCT+TGG + chr3.1:24552260-24552279 MS.gene000032:CDS 40.0%
ATAGACCAATCCGAAGAGTT+TGG - chr3.1:24553950-24553969 None:intergenic 40.0%
ATCATTTGAATGCACAGGGA+TGG + chr3.1:24553859-24553878 MS.gene000032:intron 40.0%
CATCTATTAAATCAGAGCCG+CGG - chr3.1:24552942-24552961 None:intergenic 40.0%
CCATTCTCGGTGACATATAT+CGG - chr3.1:24552331-24552350 None:intergenic 40.0%
CGAAGAATGTCATTACGACA+AGG + chr3.1:24551982-24552001 MS.gene000032:CDS 40.0%
CGGGCAACAGTTAAAAACAT+AGG - chr3.1:24548549-24548568 None:intergenic 40.0%
CTCAAAACAGCAAAAGGTCT+TGG + chr3.1:24551691-24551710 MS.gene000032:intron 40.0%
CTGAATGCAGTGTACATATG+TGG + chr3.1:24550932-24550951 MS.gene000032:intron 40.0%
CTGCATCTTGATGAGTCAAT+GGG + chr3.1:24550591-24550610 MS.gene000032:CDS 40.0%
GAATACACAGGCTTTACCAT+AGG + chr3.1:24549755-24549774 MS.gene000032:intron 40.0%
GATGCCTATGCTTATACTGA+AGG + chr3.1:24548697-24548716 MS.gene000032:CDS 40.0%
GCAAAAGGTTGAATACCTGT+GGG - chr3.1:24550546-24550565 None:intergenic 40.0%
GCCTAAATCACTATACAACG+AGG + chr3.1:24551933-24551952 MS.gene000032:CDS 40.0%
GGAACCAATGTCAATGATGA+AGG + chr3.1:24550405-24550424 MS.gene000032:CDS 40.0%
GTATGCCAATTGTCTAGCAT+TGG + chr3.1:24548892-24548911 MS.gene000032:intron 40.0%
GTGGCTATATGTTGTTCCTT+GGG + chr3.1:24552261-24552280 MS.gene000032:CDS 40.0%
GTGTGGACACAAACTTACAA+AGG + chr3.1:24551600-24551619 MS.gene000032:intron 40.0%
GTTTGACCTTGTACTTGCTT+CGG - chr3.1:24551178-24551197 None:intergenic 40.0%
TAAAGATGGGGCAAACAAGA+AGG + chr3.1:24554035-24554054 MS.gene000032:CDS 40.0%
TAACAAACTAGCCATGTAGC+AGG - chr3.1:24550126-24550145 None:intergenic 40.0%
TAAGCATGCATCTTACACCA+AGG - chr3.1:24551768-24551787 None:intergenic 40.0%
TACCATCTATGTCTCTCTGT+CGG + chr3.1:24552148-24552167 MS.gene000032:intron 40.0%
TATGTCAACAATAGGATCCG+CGG + chr3.1:24552922-24552941 MS.gene000032:intron 40.0%
TGACCCCTTAAACAAGTTGT+TGG + chr3.1:24549860-24549879 MS.gene000032:intron 40.0%
TGATGTTCCAGGATAAGCAA+GGG + chr3.1:24551387-24551406 MS.gene000032:intron 40.0%
TGCAAAAGGTTGAATACCTG+TGG - chr3.1:24550547-24550566 None:intergenic 40.0%
TGGCTATATGTTGTTCCTTG+GGG + chr3.1:24552262-24552281 MS.gene000032:CDS 40.0%
TGGTAGAGGTCCTAGTATAT+GGG + chr3.1:24548675-24548694 MS.gene000032:CDS 40.0%
TTATCCTCCTCCGAGAATTT+GGG - chr3.1:24551881-24551900 None:intergenic 40.0%
TTCGCGGTTTCTTAAAGATG+GGG + chr3.1:24554023-24554042 MS.gene000032:CDS 40.0%
TTGATGTTCCAGGATAAGCA+AGG + chr3.1:24551386-24551405 MS.gene000032:intron 40.0%
TTGGCATCAGATACTTCGTA+AGG - chr3.1:24550809-24550828 None:intergenic 40.0%
TTGGCGATAGAGTGAAAAAC+TGG + chr3.1:24551006-24551025 MS.gene000032:CDS 40.0%
TTTATCCTCCTCCGAGAATT+TGG - chr3.1:24551882-24551901 None:intergenic 40.0%
TTTATGGGTGTAGATGGCTT+AGG + chr3.1:24550384-24550403 MS.gene000032:intron 40.0%
! ACTCTGTAGTGTGAGAGTAT+GGG - chr3.1:24550159-24550178 None:intergenic 40.0%
! ACTGGTTTAACTCGTAGATG+AGG - chr3.1:24553182-24553201 None:intergenic 40.0%
! AGACACCTAGATTTTCGTCT+TGG + chr3.1:24551488-24551507 MS.gene000032:CDS 40.0%
! ATTGACTCATCAAGATGCAG+TGG - chr3.1:24550591-24550610 None:intergenic 40.0%
! TCCCTCAATTTTCTATCGAG+TGG - chr3.1:24552408-24552427 None:intergenic 40.0%
! TGATGATGTGCTGCTAAGTA+TGG - chr3.1:24551122-24551141 None:intergenic 40.0%
!! AATGTTGCTTTACAGGAGAC+TGG + chr3.1:24549054-24549073 MS.gene000032:intron 40.0%
!! AGAGAAAACGGCTTTGAGAA+AGG + chr3.1:24547804-24547823 MS.gene000032:CDS 40.0%
!! ATAGATAGAAGGTGCTAGCA+AGG + chr3.1:24548648-24548667 MS.gene000032:intron 40.0%
!! ATATAGTGGATGCAAGAACC+TGG - chr3.1:24551810-24551829 None:intergenic 40.0%
!! GGTATTGGTAGGCGATTATA+TGG + chr3.1:24548579-24548598 MS.gene000032:intron 40.0%
!! TATTTTGAGAGCTGCAACCT+AGG + chr3.1:24552850-24552869 MS.gene000032:intron 40.0%
!! TGACCAAGTATTGATGACAG+AGG - chr3.1:24549431-24549450 None:intergenic 40.0%
!! TTGGTTCTACACAAATGGGT+TGG - chr3.1:24552601-24552620 None:intergenic 40.0%
!!! CTTCTGCATATTGGTTTTCG+CGG + chr3.1:24554007-24554026 MS.gene000032:CDS 40.0%
ACCAGCCAAGACGAAAATCT+AGG - chr3.1:24551496-24551515 None:intergenic 45.0%
ACCTAGGAATATGACTGGCA+TGG + chr3.1:24552866-24552885 MS.gene000032:intron 45.0%
ACTGCGAGTTCGCTATTACA+AGG + chr3.1:24553096-24553115 MS.gene000032:CDS 45.0%
ACTGTTGCCCGAATGAGTAA+TGG + chr3.1:24548558-24548577 MS.gene000032:intron 45.0%
AGTCGTTCACGCATAACTTC+AGG - chr3.1:24551845-24551864 None:intergenic 45.0%
ATAATCTTCCGAAGACCCCA+AGG - chr3.1:24552280-24552299 None:intergenic 45.0%
ATACCTTGCATCACTTGTGC+AGG + chr3.1:24553120-24553139 MS.gene000032:CDS 45.0%
ATGTGAGAGGACACTTTGCA+TGG + chr3.1:24553887-24553906 MS.gene000032:CDS 45.0%
ATGTTCCAGGATAAGCAAGG+GGG + chr3.1:24551389-24551408 MS.gene000032:intron 45.0%
ATGTTGTTCCTTGGGGTCTT+CGG + chr3.1:24552269-24552288 MS.gene000032:CDS 45.0%
CACAGGCTTTACCATAGGAA+AGG + chr3.1:24549760-24549779 MS.gene000032:intron 45.0%
CATCTTGATGAGTCAATGGG+AGG + chr3.1:24550594-24550613 MS.gene000032:CDS 45.0%
CCGATATATGTCACCGAGAA+TGG + chr3.1:24552328-24552347 MS.gene000032:CDS 45.0%
CTGCAACCTAGGAATATGAC+TGG + chr3.1:24552861-24552880 MS.gene000032:intron 45.0%
CTGCGAGTTCGCTATTACAA+GGG + chr3.1:24553097-24553116 MS.gene000032:CDS 45.0%
GAAGTTATGCGTGAACGACT+TGG + chr3.1:24551845-24551864 MS.gene000032:CDS 45.0%
GATGTTCCAGGATAAGCAAG+GGG + chr3.1:24551388-24551407 MS.gene000032:intron 45.0%
GCATAGGCATCCCATATACT+AGG - chr3.1:24548688-24548707 None:intergenic 45.0%
GCCCGAATGAGTAATGGTAT+TGG + chr3.1:24548564-24548583 MS.gene000032:intron 45.0%
GCTGGTTGTAGACTCTGAAT+GGG + chr3.1:24551421-24551440 MS.gene000032:CDS 45.0%
GGTCAGTTGTTATGTTAGGC+TGG - chr3.1:24553773-24553792 None:intergenic 45.0%
GTGGTAGAGGTCCTAGTATA+TGG + chr3.1:24548674-24548693 MS.gene000032:CDS 45.0%
TATAACAGGCAGCATCAGAG+TGG + chr3.1:24552242-24552261 MS.gene000032:intron 45.0%
TATGGCTCAACAAGGAAGAG+TGG + chr3.1:24552817-24552836 MS.gene000032:intron 45.0%
TTAGAACAGGGTCAGACACT+TGG + chr3.1:24553623-24553642 MS.gene000032:intron 45.0%
TTCACAGTTGAATGGGAAGG+CGG + chr3.1:24552101-24552120 MS.gene000032:intron 45.0%
TTCCCATCTGACTTCGTCTT+CGG + chr3.1:24547852-24547871 MS.gene000032:CDS 45.0%
TTCTAGGCTTAAGGCTCTCA+TGG - chr3.1:24549397-24549416 None:intergenic 45.0%
TTGATGAGTCAATGGGAGGA+TGG + chr3.1:24550598-24550617 MS.gene000032:CDS 45.0%
! ACCTAGATTTTCGTCTTGGC+TGG + chr3.1:24551492-24551511 MS.gene000032:CDS 45.0%
! AGACCGACTTCCCAAATTCT+CGG + chr3.1:24551868-24551887 MS.gene000032:CDS 45.0%
! CTCTGTAGTGTGAGAGTATG+GGG - chr3.1:24550158-24550177 None:intergenic 45.0%
! GGTAAAGGTTTGGAGCCATT+TGG - chr3.1:24550053-24550072 None:intergenic 45.0%
! TCTTGGTCTCGTATTTTCCC+TGG + chr3.1:24549296-24549315 MS.gene000032:CDS 45.0%
! TTTTCGTCTTACCGCCAGAT+AGG + chr3.1:24549635-24549654 MS.gene000032:intron 45.0%
!! ATAGAAGGTGCTAGCAAGGA+GGG + chr3.1:24548652-24548671 MS.gene000032:CDS 45.0%
!! AAAAAAAAAAAAAAACTAAA+AGG - chr3.1:24548104-24548123 None:intergenic 5.0%
!! AAATTAATTAAATAAAAAGA+TGG - chr3.1:24548138-24548157 None:intergenic 5.0%
ACTCCGAAGACGAAGTCAGA+TGG - chr3.1:24547858-24547877 None:intergenic 50.0%
ACTTCCCAAATTCTCGGAGG+AGG + chr3.1:24551874-24551893 MS.gene000032:CDS 50.0%
AGCATCATACCCACCAACTG+CGG - chr3.1:24551057-24551076 None:intergenic 50.0%
AGTCGCCACTTCTGCTTATC+AGG + chr3.1:24547875-24547894 MS.gene000032:CDS 50.0%
ATAAGCAAGGGGGACAAGTG+GGG + chr3.1:24551399-24551418 MS.gene000032:CDS 50.0%
CACCGACAGAGAGACATAGA+TGG - chr3.1:24552153-24552172 None:intergenic 50.0%
CCTCCGAGAATTTGGGAAGT+CGG - chr3.1:24551874-24551893 None:intergenic 50.0%
CTCCGAAGACGAAGTCAGAT+GGG - chr3.1:24547857-24547876 None:intergenic 50.0%
GATAAGCAAGGGGGACAAGT+GGG + chr3.1:24551398-24551417 MS.gene000032:CDS 50.0%
GATGCAGTGGAAGATCCCAA+TGG - chr3.1:24550578-24550597 None:intergenic 50.0%
GATGCTGGAGTTAATGCTCC+TGG + chr3.1:24551071-24551090 MS.gene000032:CDS 50.0%
GCACAACAGCTGGACAGAAT+TGG + chr3.1:24552004-24552023 MS.gene000032:CDS 50.0%
GCCATGCCAGTCATATTCCT+AGG - chr3.1:24552870-24552889 None:intergenic 50.0%
GCTTAAGGCTCTCATGGACA+TGG - chr3.1:24549391-24549410 None:intergenic 50.0%
GTACGCGTTGAAACCCAACT+TGG - chr3.1:24549264-24549283 None:intergenic 50.0%
TAGCCTGCACAAGTGATGCA+AGG - chr3.1:24553126-24553145 None:intergenic 50.0%
TCACAGTTGAATGGGAAGGC+GGG + chr3.1:24552102-24552121 MS.gene000032:intron 50.0%
TTACGACAAGGCACAACAGC+TGG + chr3.1:24551994-24552013 MS.gene000032:CDS 50.0%
TTGCACTCTCTCCTATCTGG+CGG - chr3.1:24549649-24549668 None:intergenic 50.0%
! AGGTTTGGAGCCATTTGGCT+TGG - chr3.1:24550048-24550067 None:intergenic 50.0%
! GACAACTTCGAATGGGCTCA+AGG + chr3.1:24553919-24553938 MS.gene000032:CDS 50.0%
! GGCTGGTTGTAGACTCTGAA+TGG + chr3.1:24551420-24551439 MS.gene000032:CDS 50.0%
! GGTTTGGAGCCATTTGGCTT+GGG - chr3.1:24550047-24550066 None:intergenic 50.0%
! GTAGCTGACTCAACCAAGTG+AGG + chr3.1:24548961-24548980 MS.gene000032:intron 50.0%
!! GATAGAAGGTGCTAGCAAGG+AGG + chr3.1:24548651-24548670 MS.gene000032:intron 50.0%
ACCCACCAACTGCGGTTTGA+AGG - chr3.1:24551049-24551068 None:intergenic 55.0%
AGGGATGGAGCTGATGTGAG+AGG + chr3.1:24553874-24553893 MS.gene000032:intron 55.0%
ATCTAGGTGTCTCGCAGCAG+CGG - chr3.1:24551480-24551499 None:intergenic 55.0%
CACAGTTGAATGGGAAGGCG+GGG + chr3.1:24552103-24552122 MS.gene000032:intron 55.0%
CCACCAACTGCGGTTTGAAG+GGG - chr3.1:24551047-24551066 None:intergenic 55.0%
CCCACCAACTGCGGTTTGAA+GGG - chr3.1:24551048-24551067 None:intergenic 55.0%
CCCTTCAAACCGCAGTTGGT+GGG + chr3.1:24551045-24551064 MS.gene000032:CDS 55.0%
CCGACTTCCCAAATTCTCGG+AGG + chr3.1:24551871-24551890 MS.gene000032:CDS 55.0%
CTTGTCCCCCTTGCTTATCC+TGG - chr3.1:24551397-24551416 None:intergenic 55.0%
GGATAAGCAAGGGGGACAAG+TGG + chr3.1:24551397-24551416 MS.gene000032:intron 55.0%
! ACCATCTTATCGGTTGGGCC+AGG - chr3.1:24549544-24549563 None:intergenic 55.0%
! CCATCTTATCGGTTGGGCCA+GGG - chr3.1:24549543-24549562 None:intergenic 55.0%
! TTTCTGGGAGGGAATGACCC+TGG + chr3.1:24549523-24549542 MS.gene000032:intron 55.0%
!! CCATTTGGCTTGGGAGGTTC+CGG - chr3.1:24550038-24550057 None:intergenic 55.0%
!! GCAGTTGGTGGGTATGATGC+TGG + chr3.1:24551056-24551075 MS.gene000032:CDS 55.0%
!! TTGGAGCCATTTGGCTTGGG+AGG - chr3.1:24550044-24550063 None:intergenic 55.0%
CCCCTTCAAACCGCAGTTGG+TGG + chr3.1:24551044-24551063 MS.gene000032:CDS 60.0%
CCCTGGCCCAACCGATAAGA+TGG + chr3.1:24549540-24549559 MS.gene000032:intron 60.0%
CCGGAACCTCCCAAGCCAAA+TGG + chr3.1:24550035-24550054 MS.gene000032:intron 60.0%
CGGGGAGCTCATTGGTGAGA+AGG + chr3.1:24552121-24552140 MS.gene000032:CDS 60.0%
GAGCCCCTTCAAACCGCAGT+TGG + chr3.1:24551041-24551060 MS.gene000032:CDS 60.0%
GCTAGCAAGGAGGGTGGTAG+AGG + chr3.1:24548661-24548680 MS.gene000032:CDS 60.0%
!! GAAGGTGCTAGCAAGGAGGG+TGG + chr3.1:24548655-24548674 MS.gene000032:CDS 60.0%
!! TTGGCTTGGGAGGTTCCGGA+TGG - chr3.1:24550034-24550053 None:intergenic 60.0%
TGGGAAGGCGGGGAGCTCAT+TGG + chr3.1:24552113-24552132 MS.gene000032:CDS 65.0%
GCAAGGGGGACAAGTGGGGC+TGG + chr3.1:24551403-24551422 MS.gene000032:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 24547780 24554068 24547780 ID=MS.gene000032
chr3.1 mRNA 24547780 24554068 24547780 ID=MS.gene000032.t1;Parent=MS.gene000032
chr3.1 exon 24547780 24547896 24547780 ID=MS.gene000032.t1.exon1;Parent=MS.gene000032.t1
chr3.1 CDS 24547780 24547896 24547780 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24548652 24548718 24548652 ID=MS.gene000032.t1.exon2;Parent=MS.gene000032.t1
chr3.1 CDS 24548652 24548718 24548652 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24548800 24548858 24548800 ID=MS.gene000032.t1.exon3;Parent=MS.gene000032.t1
chr3.1 CDS 24548800 24548858 24548800 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24549242 24549317 24549242 ID=MS.gene000032.t1.exon4;Parent=MS.gene000032.t1
chr3.1 CDS 24549242 24549317 24549242 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24550397 24550471 24550397 ID=MS.gene000032.t1.exon5;Parent=MS.gene000032.t1
chr3.1 CDS 24550397 24550471 24550397 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24550550 24550637 24550550 ID=MS.gene000032.t1.exon6;Parent=MS.gene000032.t1
chr3.1 CDS 24550550 24550637 24550550 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24550965 24551190 24550965 ID=MS.gene000032.t1.exon7;Parent=MS.gene000032.t1
chr3.1 CDS 24550965 24551190 24550965 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24551398 24551513 24551398 ID=MS.gene000032.t1.exon8;Parent=MS.gene000032.t1
chr3.1 CDS 24551398 24551513 24551398 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24551811 24552025 24551811 ID=MS.gene000032.t1.exon9;Parent=MS.gene000032.t1
chr3.1 CDS 24551811 24552025 24551811 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24552108 24552142 24552108 ID=MS.gene000032.t1.exon10;Parent=MS.gene000032.t1
chr3.1 CDS 24552108 24552142 24552108 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24552250 24552349 24552250 ID=MS.gene000032.t1.exon11;Parent=MS.gene000032.t1
chr3.1 CDS 24552250 24552349 24552250 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24553041 24553149 24553041 ID=MS.gene000032.t1.exon12;Parent=MS.gene000032.t1
chr3.1 CDS 24553041 24553149 24553041 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
chr3.1 exon 24553876 24554068 24553876 ID=MS.gene000032.t1.exon13;Parent=MS.gene000032.t1
chr3.1 CDS 24553876 24554068 24553876 ID=cds.MS.gene000032.t1;Parent=MS.gene000032.t1
Gene Sequence

>MS.gene000032

ATGGTAAAGAAAGAAGAATTCATGAGAGAAAACGGCTTTGAGAAAGGACAAGCAGAAGTCTCACGCAGTGACTTCCCATCTGACTTCGTCTTCGGAGTCGCCACTTCTGCTTATCAGGTACTTCATCAATGCAGATTCACATTCATTATTTGCTAAACTTTCAATTTGATCTCTAAACTATTGATGCTTTTTCGATGATTTGGTGCATGATGCTAACTTGATGAATCACTGAATTAGTCTTTGACTTTGTAAAAGACTTTCAATATTTTAAAAGGTCAAATACATCCGGAGTCTTTATGTTTAACGTTTGTAATAGACTGTCCTTTTAGTTTTTTTTTTTTTTTTTGCACGATTACCATCTTTTTATTTAATTAATTTTCAAAATAGCGAGCTTGAAATTTGAACTGTCGGGTATAAATGCAACGCGAGTCCATTTATCTTGATCTCGAAATTGAAGATTTACTGTTGATTATTTATTACTTTGTGGTGAAAAAAATGTTAATTTGAGCTTGCTTTAATTTCTTTGCTTTTGCTCTCTCTTTGTTATAGTTGTTTTTGTGGAACAAAATGACACTGCATTTTATATATACTTTTTGTCTTGTTTTGTTCTGCTCTTAACTTGCACCAAAGATGCATATAACAAGACTTAGACGATCTCTTCTGTGTTATTCTAACCTATCCACGGTTTTCTATGTTTCTAATTTTTATTTTTTTTGTTGATCCTATACTTTTGTAAAAGTTAATAACAAATTATTCTGTTGTTGATCCTATGTTTTTAACTGTTGCCCGAATGAGTAATGGTATTGGTAGGCGATTATATGGATCCGAGTTAATTTTTCTCTGAAACTATAACTTGTTGCTTATTTCTATAGATAGAAGGTGCTAGCAAGGAGGGTGGTAGAGGTCCTAGTATATGGGATGCCTATGCTTATACTGAAGGTATGTGAATGATTTCCTCAATTTGCTCAAATTGTGCTCCTTGATGCTTCATTACTTACTATTTTTGTGTTGTTTTGGTAGGAAAAATACTCGACAAAAGCAATGGCGATGTAGCAGTTGATCATTATCATCGTTATAAGGTCAGTGATGTCTTTCTTTTGCCTAAATATTGTGTATGCCAATTGTCTAGCATTGGTCTTTTGCTTAGTTATTATCATCGTATATGACGTCGTTTAATCTATGTAGCTGACTCAACCAAGTGAGGAAAGATTTTTGTGGTTGTACATATTGTCTTTCTGGATTGATTTTGGTTTAGAAATTAATATTTGCATTTAAATGTTGCTTTACAGGAGACTGGTTAATTTTGTCCCCATATTGAGTCTATTTTTAAGCACGAATGCGTGAAAGTGATATTCAATCTTTGTAATTTTTTCATATCTTACTATTATGTCTGTAACTGTCAAGATCATGTCGTGCACGTAAATTTCAGATTTTAACATTCTTAATGTAACTATGTGAACAGGAAGATATTGATCTTATAGCCAAGTTGGGTTTCAACGCGTACAGATTTTCAATTTCTTGGTCTCGTATTTTCCCTGGTATGTTTTATTAGTGATGAATTCTAAATACATATCTTCTTTATATGTTTCAGTGTTAATTAAATTATTTCCATGTCCATGAGAGCCTTAAGCCTAGAAGTTTATCAACTCCTCTGTCATCAATACTTGGTCAATAGTTAATATTTGCATCTTCGGCTCATAAAGACATGTTTACAACAGATGATTAAAGGCGTAAATTAAGTCTTTTCTGGGAGGGAATGACCCTGGCCCAACCGATAAGATGGTAAAGTAAAAAAGATAGGAGAGGTTTTTCAAATTTTAAAGATAGGAGAGGTCTTTCAATAAAATATAACACTTTTTCGTCTTACCGCCAGATAGGAGAGAGTGCAATTTTTTTATACAGTGGGGAGGAATATGTAATGTGCAAATTTCTCAAGAAAATAGTGTTACGTATAGCAAAATAAAAAAGAAGCAGGGAATACACAGGCTTTACCATAGGAAAGGATATGTAATGTGCAAATTTCTTGTGTCTCATTTGAAATCTGATAAAAAATGTGACACACACTACTGGTAAGAAATGATGACCCCTTAAACAAGTTGTTGGCTAATATAGGAGATGGTGCGAGAACTGTTGAGAACGCGTGATATGTACCGTAAACTCTGCACAAGAAATATGGAATACAACTTCATGAACTACGAAATTAAGCTCAGAAACTACAAGAAAAGAAAGAAGAGAAACTAACAGACTTAAACCATCCGGAACCTCCCAAGCCAAATGGCTCCAAACCTTTACCAAATTAATTATCCACTACTTACATCGTTCACATATTCCCATTCTAACTAACCTGCTACATGGCTAGTTTGTTACAATTTTCACCCCATACTCTCACACTACAGAGTTTCTTTTTTAATTTCTTATTAATCTATCAAGATTGCTAAATGTTTTGAGGATAATAACATCGTTCGCCTTGTCCCTAAAACCATTATTTTTAGGTTTTACATATACGATAACAGTTCTTACTTCTTACATTAATATGTTGATTTGGTTTGTCGTGCTATTGATAATTACAGAATCTTTAGATTTCATTTTATTATATTGCAATGTTTTATGGGTGTAGATGGCTTAGGAACCAATGTCAATGATGAAGGCATAACATTTTACAACAACATTATCAATGCTCTTCTTGAAAAAGGTATTGTCTACAAAAACCTGCTTTGCCTTAATATTTTTATCTCTTCTATCAACCATATATATTAATCATTTCCCACAGGTATTCAACCTTTTGCAACTTTGTACCATTGGGATCTTCCACTGCATCTTGATGAGTCAATGGGAGGATGGTTGAATAAAAATATCATGTAGGTATCATCTAATTAACTATTATTATTTTTTTATTTTACTATATATTTCTTTCTAGATAATGCAAAAATTGATTTGTATGATGTGCTTGAAAGTATTAAAGGTTATGACGTGGTTGAATAAAAAAATCATGTAGGTATCATCTAACTGAGTATGGTTAGAAGCTTCCTTACGAAGTATCTGATGCCAAGTATATATTTAATTTGTTATTGGACCTTACCTCTAAATTTTTTGATAAATATGTTTATTGATAAAAGTGTTCAAATTCATGTTTGATTTCCAATATTCTATTACTGAATGCAGTGTACATATGTGGCATGTTGCAGAGAATATTTTGCAGTCTATGCAGATACTTGCTTTGCAAGTTTTGGCGATAGAGTGAAAAACTGGATTACTATTAACGAGCCCCTTCAAACCGCAGTTGGTGGGTATGATGCTGGAGTTAATGCTCCTGGAAGAAGTGAAAATAGATCAGTAGAACCATACTTAGCAGCACATCATCAAATCTTGGCCCATGCAGAAGCTGTTTCTATTTACCGAAGCAAGTACAAGGTCAAACACTATACTTTTTCCTACTTGTTAGATTACATTTATTTTCTTTAGTTTGTTATATTTTTCTGCTATCTCCTACTCGAAGAATATATTTTCAATCATCCTACATGGCAACTACTCTCATTAATATCATAACTTCGCGTGCACAGTTTTATTATAAGACTTGCACAATAGTTGAGGTAAAACTTTATTCTCTTGATGTTCCAGGATAAGCAAGGGGGACAAGTGGGGCTGGTTGTAGACTCTGAATGGGCAGAGCCAAACTCTGATAAGATTGAAGATAAATCCGCTGCTGCGAGACACCTAGATTTTCGTCTTGGCTGGTAATTCCTATACATACATTTGTTTTATATTATTAGTTTTCATAAGATTTCCATAGATTTTCCACTTGATATAAATGCATGAAGATGTGTGGACACAAACTTACAAAGGTATACATACATTTTTGCGTTTAACGTTGGAAATGCTCTTCTAGTTTCTTCTATTCTCTAAATATTAAACTCAAAACAGCAAAAGGTCTTGGTTTTTCTTCGATGCTCGTGAACACTAGAAATTGAAGGTTGAGGATATTTAACCTTGGTGTAAGATGCATGCTTATGATAGAATATATTCTTAACCAGGTTCTTGCATCCACTATATTATGGAGACTATCCTGAAGTTATGCGTGAACGACTTGGAGACCGACTTCCCAAATTCTCGGAGGAGGATAAAAAATTTCTTTTGAATTCTTTGGACTTCATTGGCCTAAATCACTATACAACGAGGTTAATTTCACATGTGACAGAAAGCACCGAAGAATGTCATTACGACAAGGCACAACAGCTGGACAGAATTGGTAAATAATTCGATTTTCGTAGAATTTTCTAAACTATATATCCAAAATGAATCTTCCTTGATGATTGAGCTGTTTTTCACAGTTGAATGGGAAGGCGGGGAGCTCATTGGTGAGAAGGTATATACCATCTATGTCTCTCTGTCGGTGTATTGTAATATATACACACACACACACACACAGACAAGACCAAAGATGCAAGTTTATATTCTATGTGCATATAACAGGCAGCATCAGAGTGGCTATATGTTGTTCCTTGGGGTCTTCGGAAGATTATTAATTACATATCGCAAAAATATGCTGCACCGATATATGTCACCGAGAATGGTATGTGACTTTCTTTTCCTTCTTGTCCACTTTTAGAAAACAAATAGGGAATGAACCACTCGATAGAAAATTGAGGGAGAAATCATGTGTGTGTCTATATATCTCTTTTGAATCTTCTGTAGTGTTTGGCATGTACGTATAATGAAACAGAACCGCCTTTTATGTTTTGTTCTCATTGGTGCCAGTATTTATGTAAAGCCAAAATGTATCACTTTTTTCCTACATGTTCTGTTCTATTTTCTTTGATTCCAACCCATTTGTGTAGAACCAAAATGTATCACTTTTCTTACCTTTTGTCCCCTTCTATCGTTTATTAATATACACCAATTTATCCTGTTATGTATTGTTTCTAACTTGTCTCTCAAATGAATGGATATTGAAAGTATATACGTTATTAAGTCTGAAATAATCGTGAACTATAAAAAAGAACGGAAATATGTGTAAATGGACGAGTGTGAGTTATGTTATATGGCTCAACAAGGAAGAGTGGATGCAATGTGTATTTTGAGAGCTGCAACCTAGGAATATGACTGGCATGGCAAAATCCTGATTAGATAGCATAAGGTTGAAGATATGTCAACAATAGGATCCGCGGCTCTGATTTAATAGATGATAAACAGATTTTATATGACTGGACCAGAACTTTATAAAATGGTTCTCGTATTTATAAGGCTGTCTTTCCATTTAACAGGTATGGATGATGAAGACAATGATAGCTTGCCACTAAATGAGATGCTAGATGACAAACTGCGAGTTCGCTATTACAAGGGATACCTTGCATCACTTGTGCAGGCTATAAAGTAAGATTTCCATTTTCTTCTCACACACACCTCATCTACGAGTTAAACCAGTTTATTTTTCAAATTATCGAGTATTATGAATAGAGAGAATTGAATGGAAATAGATTTCTCACTAATGAATTAAGCTTAGTTGAAGTTGTATATATACACAAGAGTGTCTCTATTTTAGCTTATCATGTGTAACAAACAGGAAATCATTAACTCTTAACTATCTAATGATTACTTGTTGCACAAGTAATGATTCTCTAACTAATTGTCAAACTATCTAATGATTACTTGCTGCACAAGTAATCTTTGCTTAGCTGATATGGTGTGATAATAAGTAATATAAAAACGAAGTATATGGTTTAATGTTTTCTTTGAACCTTATTATGCATATGTCTGTCACTGAACAAATTTATAACAATACAACTTTGAGAACTTGAAATTGTTATAAATGATGATTGTCCTATTTGCTTAAAAACATTGAAAGTTTAGAACAGGGTCAGACACTTGGTCTTTGTCCATTGAAAATCATAAAAGCCTTTCTGATCTATACATGATTTTGAAAAGAGAATAAAAAAAAAATTAAGGGAACACTTAATATACAATTTTCACATCATTATCAAATACAGTTTTCACCAGCCTAACATAACAACTGACCGAGTAAAATCGTTTGAACTTCAAAACAGAATAAGAATCTTAATCAAACACGCCTAAAGTTTTGTAAATCATTTGAATGCACAGGGATGGAGCTGATGTGAGAGGACACTTTGCATGGTCATTACTTGACAACTTCGAATGGGCTCAAGGTTATACCAAACTCTTCGGATTGGTCTATGTAGATTACAAAAATGGACTCACTAGGCACCCAAAGTCTTCTGCATATTGGTTTTCGCGGTTTCTTAAAGATGGGGCAAACAAGAAGGGTAAAGAATAG
Protein sequence

>MS.gene000032.t1

MVKKEEFMRENGFEKGQAEVSRSDFPSDFVFGVATSAYQIEGASKEGGRGPSIWDAYAYTEGKILDKSNGDVAVDHYHRYKEDIDLIAKLGFNAYRFSISWSRIFPDGLGTNVNDEGITFYNNIINALLEKGIQPFATLYHWDLPLHLDESMGGWLNKNIIEYFAVYADTCFASFGDRVKNWITINEPLQTAVGGYDAGVNAPGRSENRSVEPYLAAHHQILAHAEAVSIYRSKYKDKQGGQVGLVVDSEWAEPNSDKIEDKSAAARHLDFRLGWFLHPLYYGDYPEVMRERLGDRLPKFSEEDKKFLLNSLDFIGLNHYTTRLISHVTESTEECHYDKAQQLDRIVEWEGGELIGEKAASEWLYVVPWGLRKIINYISQKYAAPIYVTENGMDDEDNDSLPLNEMLDDKLRVRYYKGYLASLVQAIKDGADVRGHFAWSLLDNFEWAQGYTKLFGLVYVDYKNGLTRHPKSSAYWFSRFLKDGANKKGKE