AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75053

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75053.t1 MTR_4g067040 89.922 129 10 1 1 129 1 126 2.28e-79 239
MS.gene75053.t1 MTR_4g067040 89.922 129 10 1 1 129 1 126 4.31e-79 239
MS.gene75053.t1 MTR_4g066590 88.372 129 11 2 1 129 1 125 1.63e-75 233
MS.gene75053.t1 MTR_4g066630 89.147 129 12 1 1 129 5 131 2.53e-69 213
MS.gene75053.t1 MTR_4g066630 89.147 129 12 1 1 129 5 131 1.45e-68 213
MS.gene75053.t1 MTR_4g066630 89.147 129 12 1 1 129 5 131 2.49e-68 213
MS.gene75053.t1 MTR_4g066630 89.147 129 12 1 1 129 5 131 1.37e-67 213
MS.gene75053.t1 MTR_4g066580 65.873 126 41 1 4 129 8 131 3.06e-54 176
MS.gene75053.t1 MTR_4g066580 65.873 126 41 1 4 129 8 131 2.80e-53 176
MS.gene75053.t1 MTR_4g066640 63.934 122 42 1 8 129 12 131 4.32e-52 169
MS.gene75053.t1 MTR_2g098790 66.667 129 40 2 1 129 5 130 1.62e-51 171
MS.gene75053.t1 MTR_4g066640 63.934 122 42 1 8 129 12 131 6.51e-51 169
MS.gene75053.t1 MTR_6g078450 81.720 93 17 0 36 128 35 127 1.19e-49 164
MS.gene75053.t1 MTR_4g066240 64.754 122 40 1 8 129 10 128 1.39e-49 164
MS.gene75053.t1 MTR_6g078450 81.720 93 17 0 36 128 35 127 4.74e-49 164
MS.gene75053.t1 MTR_3g028720 60.938 128 46 1 6 129 3 130 5.27e-49 162
MS.gene75053.t1 MTR_4g066240 64.754 122 40 1 8 129 10 128 6.18e-49 164
MS.gene75053.t1 MTR_4g066240 64.754 122 40 1 8 129 10 128 6.76e-49 164
MS.gene75053.t1 MTR_3g028720 60.938 128 46 1 6 129 3 130 1.09e-48 161
MS.gene75053.t1 MTR_3g028720 60.938 128 46 1 6 129 3 130 1.50e-48 162
MS.gene75053.t1 MTR_2g098540 68.376 117 35 2 12 128 8 122 1.61e-48 162
MS.gene75053.t1 MTR_5g071520 61.905 126 47 1 4 129 7 131 3.48e-48 162
MS.gene75053.t1 MTR_3g028720 60.938 128 46 1 6 129 3 130 4.57e-48 162
MS.gene75053.t1 MTR_2g098520 75.000 96 24 0 34 129 31 126 1.42e-47 160
MS.gene75053.t1 MTR_6g078380 64.754 122 37 1 8 129 13 128 1.77e-47 160
MS.gene75053.t1 MTR_6g078330 63.910 133 35 3 7 135 12 135 1.97e-47 157
MS.gene75053.t1 MTR_4g066330 62.400 125 45 1 6 130 12 134 1.14e-46 157
MS.gene75053.t1 MTR_3g026280 75.269 93 23 0 36 128 21 113 1.82e-46 157
MS.gene75053.t1 MTR_6g078330 63.910 133 35 3 7 135 12 135 3.06e-46 157
MS.gene75053.t1 MTR_4g066210 71.134 97 28 0 33 129 39 135 3.89e-46 157
MS.gene75053.t1 MTR_4g023000 72.043 93 26 0 36 128 23 115 4.13e-44 150
MS.gene75053.t1 MTR_4g066280 70.213 94 28 0 36 129 40 133 7.06e-42 145
MS.gene75053.t1 MTR_4g015420 62.500 104 38 1 26 129 54 156 6.47e-39 137
MS.gene75053.t1 MTR_4g083000 55.932 118 48 2 9 126 3 116 2.48e-38 135
MS.gene75053.t1 MTR_3g026400 53.968 126 48 2 4 127 10 127 5.20e-38 132
MS.gene75053.t1 MTR_4g015460 65.957 94 31 1 37 130 42 134 1.08e-37 134
MS.gene75053.t1 MTR_3g026400 53.968 126 48 2 4 127 10 127 5.11e-37 132
MS.gene75053.t1 MTR_2g098540 80.822 73 14 0 56 128 6 78 8.88e-37 130
MS.gene75053.t1 MTR_2g043200 71.591 88 24 1 42 129 70 156 1.18e-36 131
MS.gene75053.t1 MTR_3g026620 52.419 124 54 2 4 127 10 128 4.96e-36 129
MS.gene75053.t1 MTR_0110s0020 50.000 122 55 2 5 126 16 131 6.59e-36 125
MS.gene75053.t1 MTR_4g081530 52.137 117 49 2 10 126 3 112 4.78e-35 127
MS.gene75053.t1 MTR_0110s0040 50.000 122 55 2 5 126 16 131 5.15e-35 125
MS.gene75053.t1 MTR_7g068910 60.870 92 35 1 36 127 30 120 5.21e-35 127
MS.gene75053.t1 MTR_0110s0040 50.000 122 55 2 5 126 16 131 3.90e-34 124
MS.gene75053.t1 MTR_0110s0030 50.000 122 55 2 5 126 16 131 5.62e-34 124
MS.gene75053.t1 MTR_5g044000 48.889 135 47 2 13 126 1 134 6.39e-34 124
MS.gene75053.t1 MTR_1g088630 61.798 89 31 1 39 127 29 114 1.43e-33 119
MS.gene75053.t1 MTR_1g088630 61.798 89 31 1 39 127 29 114 2.44e-33 120
MS.gene75053.t1 MTR_1g088610 62.222 90 31 1 38 127 28 114 5.78e-33 122
MS.gene75053.t1 MTR_5g068740 61.111 90 32 1 38 127 28 114 8.77e-33 120
MS.gene75053.t1 MTR_2g022760 50.806 124 57 2 11 130 6 129 9.65e-33 120
MS.gene75053.t1 MTR_3g033810 60.000 90 35 1 37 126 21 109 2.92e-32 119
MS.gene75053.t1 MTR_7g068910 54.902 102 35 2 36 127 30 130 4.63e-32 119
MS.gene75053.t1 MTR_3g033790 60.000 90 35 1 37 126 19 107 1.11e-31 117
MS.gene75053.t1 MTR_4g016920 57.609 92 38 1 36 127 26 116 3.06e-31 116
MS.gene75053.t1 MTR_4g131810 55.056 89 40 0 42 130 33 121 1.61e-30 114
MS.gene75053.t1 MTR_4g131800 58.427 89 36 1 42 130 521 608 2.38e-30 114
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 3.80e-29 110
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 4.02e-29 109
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 4.17e-29 109
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 6.22e-29 109
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 7.19e-29 109
MS.gene75053.t1 MTR_2g022710 45.669 127 63 3 6 130 5 127 9.88e-29 109
MS.gene75053.t1 MTR_2g079550 54.444 90 40 1 37 126 30 118 7.55e-28 107
MS.gene75053.t1 MTR_2g079580 53.333 90 41 1 37 126 32 120 1.04e-27 105
MS.gene75053.t1 MTR_2g079580 53.333 90 41 1 37 126 32 120 1.97e-27 106
MS.gene75053.t1 MTR_3g026400 59.756 82 31 1 46 127 17 96 2.89e-26 102
MS.gene75053.t1 MTR_7g033860 51.111 90 44 0 39 128 50 139 1.12e-25 101
MS.gene75053.t1 MTR_1g088630 62.500 72 24 1 56 127 14 82 2.04e-24 97.4
MS.gene75053.t1 MTR_0108s0030 45.556 90 49 0 39 128 5 94 2.62e-23 94.4
MS.gene75053.t1 MTR_4g066340 80.000 50 10 0 80 129 6 55 6.21e-20 84.7
MS.gene75053.t1 MTR_7g051510 41.758 91 46 1 38 128 76 159 5.24e-18 79.3
MS.gene75053.t1 MTR_7g051650 42.857 91 45 1 38 128 76 159 7.50e-18 79.0
MS.gene75053.t1 MTR_7g051650 42.857 91 41 2 38 128 76 155 4.28e-17 77.0
MS.gene75053.t1 MTR_7g051610 39.560 91 48 1 38 128 76 159 8.53e-17 75.9
MS.gene75053.t1 MTR_8g038650 55.556 54 23 1 46 99 7 59 2.01e-15 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75053.t1 AT5G44640 56.250 128 50 2 1 128 1 122 1.65e-40 141
MS.gene75053.t1 AT2G25630 54.331 127 49 2 2 128 4 121 2.98e-40 140
MS.gene75053.t1 AT5G42260 57.377 122 50 2 7 128 3 122 3.86e-40 140
MS.gene75053.t1 AT5G24550 63.636 99 35 1 37 135 32 129 1.98e-39 139
MS.gene75053.t1 AT5G24540 53.077 130 53 3 9 135 5 129 2.36e-39 137
MS.gene75053.t1 AT5G24540 53.077 130 53 3 9 135 5 129 7.22e-39 137
MS.gene75053.t1 AT2G44460 46.667 135 61 2 1 135 3 126 8.38e-39 137
MS.gene75053.t1 AT2G44450 66.304 92 31 0 37 128 31 122 5.92e-38 134
MS.gene75053.t1 AT3G18070 59.596 99 39 1 28 126 21 118 1.11e-37 132
MS.gene75053.t1 AT3G60140 52.459 122 50 3 16 135 8 123 1.85e-37 132
MS.gene75053.t1 AT2G44470 50.459 109 53 1 27 135 19 126 2.81e-37 131
MS.gene75053.t1 AT3G18070 59.596 99 39 1 28 126 21 118 7.93e-37 131
MS.gene75053.t1 AT3G60130 63.043 92 34 0 37 128 30 121 8.75e-37 131
MS.gene75053.t1 AT2G44470 50.459 109 53 1 27 135 19 126 1.02e-36 130
MS.gene75053.t1 AT3G18070 59.596 99 39 1 28 126 21 118 1.03e-36 131
MS.gene75053.t1 AT2G44480 63.830 94 34 0 36 129 65 158 1.19e-36 129
MS.gene75053.t1 AT3G60140 52.459 122 50 3 16 135 8 123 1.33e-36 132
MS.gene75053.t1 AT2G44490 56.364 110 43 2 29 134 7 115 2.10e-36 131
MS.gene75053.t1 AT2G44470 50.459 109 53 1 27 135 19 126 3.86e-36 130
MS.gene75053.t1 AT2G44480 63.830 94 34 0 36 129 34 127 6.62e-36 129
MS.gene75053.t1 AT2G44480 63.830 94 34 0 36 129 65 158 7.43e-36 129
MS.gene75053.t1 AT1G26560 62.366 93 34 1 34 126 29 120 1.32e-35 128
MS.gene75053.t1 AT1G52400 49.612 129 59 3 8 134 11 135 1.96e-35 127
MS.gene75053.t1 AT5G54570 61.538 91 35 0 36 126 29 119 2.49e-35 127
MS.gene75053.t1 AT1G52400 49.612 129 59 3 8 134 11 135 3.51e-35 127
MS.gene75053.t1 AT1G52400 49.612 129 59 3 8 134 11 135 3.51e-35 127
MS.gene75053.t1 AT5G54570 61.538 91 35 0 36 126 29 119 4.65e-35 127
MS.gene75053.t1 AT3G62750 55.319 94 37 1 34 127 20 108 1.77e-34 123
MS.gene75053.t1 AT3G62750 55.319 94 37 1 34 127 20 108 1.77e-34 123
MS.gene75053.t1 AT3G62750 55.319 94 37 1 34 127 46 134 3.59e-34 123
MS.gene75053.t1 AT3G62750 47.692 130 43 4 1 127 27 134 9.37e-34 122
MS.gene75053.t1 AT3G18080 59.574 94 37 1 33 126 35 127 1.06e-33 123
MS.gene75053.t1 AT3G62750 55.319 94 37 1 34 127 20 108 1.40e-33 122
MS.gene75053.t1 AT3G21370 51.402 107 50 2 30 136 26 130 1.69e-33 122
MS.gene75053.t1 AT3G62750 55.319 94 37 1 34 127 46 134 1.75e-33 122
MS.gene75053.t1 AT3G09260 53.061 98 45 1 30 127 28 124 2.66e-33 122
MS.gene75053.t1 AT1G66280 45.378 119 64 1 9 127 8 125 3.61e-33 122
MS.gene75053.t1 AT1G75940 53.061 98 45 1 37 134 37 133 1.63e-32 120
MS.gene75053.t1 AT1G60090 57.143 91 34 1 37 127 24 109 1.68e-32 120
MS.gene75053.t1 AT1G60090 57.143 91 34 1 37 127 24 109 1.74e-32 120
MS.gene75053.t1 AT1G02850 60.000 90 33 1 38 127 27 113 2.82e-32 118
MS.gene75053.t1 AT1G60270 58.427 89 33 2 37 125 24 108 4.76e-32 117
MS.gene75053.t1 AT1G02850 60.000 90 33 1 38 127 27 113 6.31e-32 118
MS.gene75053.t1 AT1G02850 60.000 90 33 1 38 127 27 113 6.34e-32 118
MS.gene75053.t1 AT1G02850 60.000 90 33 1 38 127 27 113 6.35e-32 118
MS.gene75053.t1 AT1G02850 60.000 90 33 1 38 127 27 113 7.96e-32 118
MS.gene75053.t1 AT3G60120 56.000 100 43 1 36 135 13 111 9.13e-32 118
MS.gene75053.t1 AT5G36890 56.863 102 40 2 29 130 11 108 1.12e-31 117
MS.gene75053.t1 AT5G36890 56.863 102 40 2 29 130 11 108 1.13e-31 117
MS.gene75053.t1 AT4G27830 47.059 119 53 3 9 127 3 111 1.57e-31 117
MS.gene75053.t1 AT1G66270 48.039 102 52 1 26 127 25 125 2.16e-31 117
MS.gene75053.t1 AT1G66270 48.039 102 52 1 26 127 25 125 2.35e-31 117
MS.gene75053.t1 AT3G03640 46.457 127 63 1 1 127 3 124 2.83e-31 117
MS.gene75053.t1 AT3G62740 52.128 94 41 1 34 127 20 109 9.16e-31 114
MS.gene75053.t1 AT4G22100 47.500 120 48 2 8 127 3 107 1.73e-30 114
MS.gene75053.t1 AT4G27820 51.923 104 42 2 36 139 22 117 1.78e-30 114
MS.gene75053.t1 AT5G28510 50.000 100 48 2 29 127 30 128 1.81e-30 114
MS.gene75053.t1 AT1G47600 55.319 94 39 1 36 129 44 134 2.15e-30 114
MS.gene75053.t1 AT3G62740 52.128 94 41 1 34 127 20 109 2.23e-30 114
MS.gene75053.t1 AT1G47600 55.319 94 39 1 36 129 44 134 2.33e-30 114
MS.gene75053.t1 AT1G61820 56.322 87 38 0 42 128 35 121 5.81e-30 113
MS.gene75053.t1 AT1G51470 54.255 94 40 1 36 129 44 134 6.89e-30 112
MS.gene75053.t1 AT1G61810 55.056 89 40 0 42 130 38 126 1.49e-29 109
MS.gene75053.t1 AT2G32860 51.064 94 46 0 37 130 94 187 4.56e-29 110
MS.gene75053.t1 AT2G32860 51.064 94 46 0 37 130 94 187 4.83e-29 110
MS.gene75053.t1 AT1G61810 55.056 89 40 0 42 130 38 126 1.31e-28 108
MS.gene75053.t1 AT1G45191 53.261 92 38 1 38 129 30 116 2.12e-28 107
MS.gene75053.t1 AT1G45191 53.261 92 38 1 38 129 30 116 2.45e-28 107
MS.gene75053.t1 AT1G61810 55.056 89 40 0 42 130 38 126 2.55e-28 108
MS.gene75053.t1 AT1G61810 55.056 89 40 0 42 130 38 126 2.71e-28 108
MS.gene75053.t1 AT1G45191 53.261 92 38 1 38 129 30 116 5.29e-28 107
MS.gene75053.t1 AT1G45191 53.261 92 38 1 38 129 30 116 5.59e-28 107
MS.gene75053.t1 AT1G45191 53.261 92 38 1 38 129 30 116 5.61e-28 107
MS.gene75053.t1 AT1G51490 55.294 85 35 1 44 128 27 108 2.92e-27 104
MS.gene75053.t1 AT1G45191 50.000 102 38 2 38 129 30 128 6.25e-27 104
MS.gene75053.t1 AT5G25980 43.704 135 64 5 1 129 12 140 1.76e-26 103
MS.gene75053.t1 AT5G25980 43.704 135 64 5 1 129 12 140 1.76e-26 103
MS.gene75053.t1 AT5G25980 43.704 135 64 5 1 129 12 140 2.42e-26 103
MS.gene75053.t1 AT4G21760 53.933 89 40 1 42 130 59 146 3.86e-26 102
MS.gene75053.t1 AT4G21760 53.933 89 40 1 42 130 59 146 4.21e-26 102
MS.gene75053.t1 AT5G26000 41.406 128 66 3 8 129 4 128 4.17e-25 99.8
MS.gene75053.t1 AT5G26000 41.406 128 66 3 8 129 4 128 4.34e-25 99.4
MS.gene75053.t1 AT3G18070 55.556 72 31 1 28 99 21 91 3.03e-21 87.8
MS.gene75053.t1 AT3G18070 55.556 72 31 1 28 99 21 91 5.07e-21 87.8
MS.gene75053.t1 AT5G48375 41.935 93 41 3 33 124 34 114 1.32e-16 75.5

Find 28 sgRNAs with CRISPR-Local

Find 39 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCAGAACGCTTTATCTT+TGG 0.289693 6.3:-83690568 MS.gene75053:CDS
AAGACAGCAAGAGGGAAAAT+AGG 0.332773 6.3:+83690680 None:intergenic
CTCAAGTAGGTTCATTGAAT+AGG 0.411124 6.3:-83690597 MS.gene75053:CDS
GTGGAAGAGGACCAAGCATA+TGG 0.421804 6.3:-83690501 MS.gene75053:CDS
GTGCCAAAGATAAAGCGTTC+TGG 0.428681 6.3:+83690565 None:intergenic
TGACTCGTATCATCGATATA+AGG 0.447189 6.3:-83690416 MS.gene75053:CDS
TTGAAACTAAAGACAGCAAG+AGG 0.477822 6.3:+83690671 None:intergenic
GAGTATTCTAGACCAAGATA+TGG 0.494023 6.3:+83690345 None:intergenic
GCGGCAAGTGAAGGTGGAAG+AGG 0.531905 6.3:-83690514 MS.gene75053:CDS
TTGAGGATATCTATGGGTGA+AGG 0.548603 6.3:+83690474 None:intergenic
TCTTCTGCATATCAATATGA+AGG 0.549189 6.3:-83690538 MS.gene75053:CDS
CTATTCAATGAACCTACTTG+AGG 0.549338 6.3:+83690598 None:intergenic
AAAATCACTGATGGAAACAC+TGG 0.550954 6.3:-83690451 MS.gene75053:CDS
CATCGATATAAGGAAGATGT+TGG 0.560372 6.3:-83690406 MS.gene75053:CDS
TATGAAGGTGCGGCAAGTGA+AGG 0.569016 6.3:-83690523 MS.gene75053:CDS
TGGAAGAGGACCAAGCATAT+GGG 0.575410 6.3:-83690500 MS.gene75053:CDS
TATCATGAAGGATATGAACT+TGG 0.589450 6.3:-83690383 MS.gene75053:CDS
GAAGGTGCGGCAAGTGAAGG+TGG 0.593643 6.3:-83690520 MS.gene75053:CDS
AAGTGAGGAATTAATCAAGA+AGG 0.594613 6.3:-83690207 MS.gene75053:CDS
TTCATCATTACTTTCACACA+TGG 0.598048 6.3:-83690646 MS.gene75053:CDS
GTGAAGGTATCCCATATGCT+TGG 0.598625 6.3:+83690490 None:intergenic
GGAAGATGTTGGTATCATGA+AGG 0.599227 6.3:-83690395 MS.gene75053:CDS
TTCAATGAACCTACTTGAGG+AGG 0.599811 6.3:+83690601 None:intergenic
TGCATATCAATATGAAGGTG+CGG 0.626278 6.3:-83690533 MS.gene75053:CDS
TGCAGATGGAAAACTAAGTG+AGG 0.628709 6.3:-83690222 MS.gene75053:intron
AATACTATACCTCCTCAAGT+AGG 0.630121 6.3:-83690610 MS.gene75053:CDS
TGAAACTAAAGACAGCAAGA+GGG 0.702200 6.3:+83690672 None:intergenic
TGGAAACACTGGAGACGTTG+CGG 0.704033 6.3:-83690440 MS.gene75053:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAGTGAAAAATAAAAAA+TGG + chr6.3:83690631-83690650 None:intergenic 15.0%
! CTTCATTAAAATAATGCAGA+TGG - chr6.3:83690645-83690664 MS.gene75053:CDS 25.0%
! TTAATTTCAAACAATGTCAC+TGG + chr6.3:83690582-83690601 None:intergenic 25.0%
!! GGTATAAAATTGACTTACTT+GGG + chr6.3:83690561-83690580 None:intergenic 25.0%
!! TGGTATAAAATTGACTTACT+TGG + chr6.3:83690562-83690581 None:intergenic 25.0%
!!! GATTTTTTGAGGATATCTAT+GGG + chr6.3:83690416-83690435 None:intergenic 25.0%
!!! TGATTTTTTGAGGATATCTA+TGG + chr6.3:83690417-83690436 None:intergenic 25.0%
AAGTGAGGAATTAATCAAGA+AGG - chr6.3:83690674-83690693 MS.gene75053:CDS 30.0%
TATCATGAAGGATATGAACT+TGG - chr6.3:83690498-83690517 MS.gene75053:CDS 30.0%
TATCCTCAAAAAATCACTGA+TGG - chr6.3:83690421-83690440 MS.gene75053:CDS 30.0%
TCTTCTGCATATCAATATGA+AGG - chr6.3:83690343-83690362 MS.gene75053:CDS 30.0%
TGGTTAACAAGAGAAACAAA+TGG + chr6.3:83690611-83690630 None:intergenic 30.0%
TTCATCATTACTTTCACACA+TGG - chr6.3:83690235-83690254 MS.gene75053:intron 30.0%
! CATACAGATTTTCCATATCT+TGG - chr6.3:83690524-83690543 MS.gene75053:CDS 30.0%
!!! TTTCCATCAGTGATTTTTTG+AGG + chr6.3:83690427-83690446 None:intergenic 30.0%
AAAATCACTGATGGAAACAC+TGG - chr6.3:83690430-83690449 MS.gene75053:CDS 35.0%
AATACTATACCTCCTCAAGT+AGG - chr6.3:83690271-83690290 MS.gene75053:intron 35.0%
CATCGATATAAGGAAGATGT+TGG - chr6.3:83690475-83690494 MS.gene75053:CDS 35.0%
CTATTCAATGAACCTACTTG+AGG + chr6.3:83690286-83690305 None:intergenic 35.0%
CTCAAGTAGGTTCATTGAAT+AGG - chr6.3:83690284-83690303 MS.gene75053:intron 35.0%
GAGTATTCTAGACCAAGATA+TGG + chr6.3:83690539-83690558 None:intergenic 35.0%
TGAAACTAAAGACAGCAAGA+GGG + chr6.3:83690212-83690231 None:intergenic 35.0%
TGACTCGTATCATCGATATA+AGG - chr6.3:83690465-83690484 MS.gene75053:CDS 35.0%
TGCATATCAATATGAAGGTG+CGG - chr6.3:83690348-83690367 MS.gene75053:CDS 35.0%
TTGAAACTAAAGACAGCAAG+AGG + chr6.3:83690213-83690232 None:intergenic 35.0%
TTTCCAGAACGCTTTATCTT+TGG - chr6.3:83690313-83690332 MS.gene75053:intron 35.0%
AAGACAGCAAGAGGGAAAAT+AGG + chr6.3:83690204-83690223 None:intergenic 40.0%
GGAAGATGTTGGTATCATGA+AGG - chr6.3:83690486-83690505 MS.gene75053:CDS 40.0%
TGCAGATGGAAAACTAAGTG+AGG - chr6.3:83690659-83690678 MS.gene75053:CDS 40.0%
TTCAATGAACCTACTTGAGG+AGG + chr6.3:83690283-83690302 None:intergenic 40.0%
TTGAGGATATCTATGGGTGA+AGG + chr6.3:83690410-83690429 None:intergenic 40.0%
TGGAAGAGGACCAAGCATAT+GGG - chr6.3:83690381-83690400 MS.gene75053:CDS 45.0%
! GTGCCAAAGATAAAGCGTTC+TGG + chr6.3:83690319-83690338 None:intergenic 45.0%
!! GTGAAGGTATCCCATATGCT+TGG + chr6.3:83690394-83690413 None:intergenic 45.0%
GTGGAAGAGGACCAAGCATA+TGG - chr6.3:83690380-83690399 MS.gene75053:CDS 50.0%
TGGAAACACTGGAGACGTTG+CGG - chr6.3:83690441-83690460 MS.gene75053:CDS 50.0%
! TATGAAGGTGCGGCAAGTGA+AGG - chr6.3:83690358-83690377 MS.gene75053:CDS 50.0%
GCGGCAAGTGAAGGTGGAAG+AGG - chr6.3:83690367-83690386 MS.gene75053:CDS 60.0%
! GAAGGTGCGGCAAGTGAAGG+TGG - chr6.3:83690361-83690380 MS.gene75053:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 83690190 83690713 83690190 ID=MS.gene75053
chr6.3 mRNA 83690190 83690713 83690190 ID=MS.gene75053.t1;Parent=MS.gene75053
chr6.3 exon 83690341 83690713 83690341 ID=MS.gene75053.t1.exon1;Parent=MS.gene75053.t1
chr6.3 CDS 83690341 83690713 83690341 ID=cds.MS.gene75053.t1;Parent=MS.gene75053.t1
chr6.3 exon 83690190 83690239 83690190 ID=MS.gene75053.t1.exon2;Parent=MS.gene75053.t1
chr6.3 CDS 83690190 83690239 83690190 ID=cds.MS.gene75053.t1;Parent=MS.gene75053.t1
Gene Sequence

>MS.gene75053

ATGAAATATTTCCTATTTTCCCTCTTGCTGTCTTTAGTTTCAACATTCATCATTACTTTCACACATGGTCAAGAAATAATTAATACTATACCTCCTCAAGTAGGTTCATTGAATAGGAAAGATTTTCCAGAACGCTTTATCTTTGGCACAGCATCTTCTGCATATCAATATGAAGGTGCGGCAAGTGAAGGTGGAAGAGGACCAAGCATATGGGATACCTTCACCCATAGATATCCTCAAAAAATCACTGATGGAAACACTGGAGACGTTGCGGTTGACTCGTATCATCGATATAAGGAAGATGTTGGTATCATGAAGGATATGAACTTGGATGCATACAGATTTTCCATATCTTGGTCTAGAATACTCCCAAGTAAGTCAATTTTATACCAGTGACATTGTTTGAAATTAAACTCGACCATTTGTTTCTCTTGTTAACCATTTTTTATTTTTCACTTCATTAAAATAATGCAGATGGAAAACTAAGTGAGGAATTAATCAAGAAGGAACGACTATTACAATAA
Protein sequence

>MS.gene75053.t1

MKYFLFSLLLSLVSTFIITFTHGQEIINTIPPQVGSLNRKDFPERFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKITDGNTGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPNGKLSEELIKKERLLQ