AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62057

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62057.t1 MTR_4g131800 91.698 530 30 1 1 516 493 1022 0.0 1023
MS.gene62057.t1 MTR_2g022760 70.635 504 132 3 1 488 12 515 0.0 743
MS.gene62057.t1 MTR_4g131810 68.697 476 132 3 28 486 32 507 0.0 683
MS.gene62057.t1 MTR_2g022710 62.249 498 172 2 5 486 14 511 0.0 646
MS.gene62057.t1 MTR_2g022760 72.330 412 100 1 91 488 1 412 0.0 627
MS.gene62057.t1 MTR_2g022710 61.765 442 153 2 5 430 14 455 0.0 563
MS.gene62057.t1 MTR_2g022710 61.765 442 153 2 5 430 14 455 0.0 561
MS.gene62057.t1 MTR_2g022710 62.683 410 139 1 91 486 1 410 0.0 542
MS.gene62057.t1 MTR_2g079580 48.485 528 249 4 1 513 8 527 0.0 536
MS.gene62057.t1 MTR_2g022710 63.793 406 131 2 5 394 14 419 0.0 533
MS.gene62057.t1 MTR_2g079550 47.893 522 249 4 1 507 6 519 0.0 530
MS.gene62057.t1 MTR_2g022710 62.944 394 130 2 5 382 14 407 5.19e-179 509
MS.gene62057.t1 MTR_2g022710 65.405 370 126 1 5 372 14 383 1.52e-178 508
MS.gene62057.t1 MTR_4g083000 48.354 486 228 7 20 486 24 505 4.73e-160 464
MS.gene62057.t1 MTR_2g079580 51.100 409 184 3 1 394 8 415 2.29e-154 447
MS.gene62057.t1 MTR_0110s0040 47.046 474 228 6 29 486 48 514 1.47e-153 448
MS.gene62057.t1 MTR_0110s0030 47.134 471 232 5 29 486 48 514 3.55e-152 445
MS.gene62057.t1 MTR_2g098520 46.526 475 234 6 29 485 39 511 5.24e-151 442
MS.gene62057.t1 MTR_4g066210 47.908 478 229 6 29 488 48 523 3.14e-150 440
MS.gene62057.t1 MTR_4g066630 47.992 473 226 6 29 483 44 514 9.94e-150 439
MS.gene62057.t1 MTR_2g098540 46.947 475 232 6 29 485 36 508 1.04e-149 438
MS.gene62057.t1 MTR_6g078330 46.091 486 242 7 20 487 33 516 1.04e-149 439
MS.gene62057.t1 MTR_6g078450 47.579 475 227 8 29 484 41 512 2.79e-149 437
MS.gene62057.t1 MTR_5g044000 45.582 498 232 7 23 482 24 520 3.00e-148 435
MS.gene62057.t1 MTR_4g081530 46.976 496 239 7 5 482 9 498 7.40e-148 434
MS.gene62057.t1 MTR_4g066240 47.083 480 234 6 23 484 35 512 1.73e-147 433
MS.gene62057.t1 MTR_6g078380 48.008 477 226 9 29 486 41 514 4.06e-147 432
MS.gene62057.t1 MTR_2g098790 44.643 504 255 7 3 484 13 514 5.28e-147 432
MS.gene62057.t1 MTR_3g026280 45.233 493 245 7 8 482 6 491 8.31e-147 430
MS.gene62057.t1 MTR_4g066580 46.639 476 232 7 29 485 44 516 9.76e-147 431
MS.gene62057.t1 MTR_4g066590 46.723 473 232 6 29 483 38 508 1.02e-145 428
MS.gene62057.t1 MTR_4g066240 46.985 481 234 7 23 484 35 513 1.08e-145 428
MS.gene62057.t1 MTR_4g023000 42.914 501 262 6 1 484 1 494 9.84e-143 420
MS.gene62057.t1 MTR_3g028720 44.958 476 240 7 29 485 43 515 1.05e-141 419
MS.gene62057.t1 MTR_2g098540 46.204 461 228 6 43 485 6 464 2.62e-141 415
MS.gene62057.t1 MTR_4g066640 46.122 477 231 8 29 485 44 514 3.54e-140 414
MS.gene62057.t1 MTR_5g071520 46.584 483 229 7 29 484 44 524 3.96e-140 414
MS.gene62057.t1 MTR_3g026400 45.000 480 244 5 23 486 36 511 6.20e-139 411
MS.gene62057.t1 MTR_3g033810 45.135 483 224 6 22 482 19 482 4.07e-138 408
MS.gene62057.t1 MTR_3g033790 44.191 482 239 6 17 482 12 479 5.27e-137 405
MS.gene62057.t1 MTR_3g026620 45.342 483 244 5 20 486 34 512 5.50e-137 406
MS.gene62057.t1 MTR_4g066340 47.222 432 209 5 70 484 10 439 2.14e-136 402
MS.gene62057.t1 MTR_4g066330 45.243 473 217 6 29 484 46 493 9.51e-136 402
MS.gene62057.t1 MTR_4g066280 44.304 474 222 6 29 485 46 494 6.20e-135 400
MS.gene62057.t1 MTR_3g026400 44.255 470 240 6 33 486 17 480 1.83e-131 390
MS.gene62057.t1 MTR_2g043200 45.073 477 214 7 29 484 70 519 3.12e-131 391
MS.gene62057.t1 MTR_4g083000 46.747 415 198 7 91 486 1 411 1.12e-129 384
MS.gene62057.t1 MTR_4g066630 47.368 418 201 5 29 429 44 459 1.22e-127 380
MS.gene62057.t1 MTR_4g016920 40.678 472 262 5 29 489 32 496 1.04e-126 380
MS.gene62057.t1 MTR_7g068910 39.337 483 275 5 18 489 25 500 7.87e-126 377
MS.gene62057.t1 MTR_6g078450 46.905 420 202 7 29 430 41 457 6.97e-125 373
MS.gene62057.t1 MTR_6g078330 44.928 414 209 6 91 487 1 412 2.60e-124 370
MS.gene62057.t1 MTR_7g068910 38.142 506 277 8 5 489 20 510 7.07e-123 370
MS.gene62057.t1 MTR_4g015420 41.633 490 234 9 21 484 62 525 2.82e-122 369
MS.gene62057.t1 MTR_4g015460 41.129 496 243 7 15 486 33 503 3.88e-122 367
MS.gene62057.t1 MTR_5g068740 39.634 492 275 8 3 482 7 488 2.61e-121 366
MS.gene62057.t1 MTR_1g088610 39.511 491 276 8 3 482 7 487 3.49e-121 369
MS.gene62057.t1 MTR_1g088610 38.182 110 60 2 380 487 514 617 3.11e-15 79.0
MS.gene62057.t1 MTR_4g066630 48.042 383 180 5 29 394 44 424 3.91e-121 363
MS.gene62057.t1 MTR_3g028720 44.153 419 213 6 29 429 43 458 8.47e-119 357
MS.gene62057.t1 MTR_4g066580 46.615 384 184 6 29 394 44 424 1.02e-117 353
MS.gene62057.t1 MTR_4g066630 52.848 316 146 3 29 341 44 359 1.34e-115 347
MS.gene62057.t1 MTR_0110s0040 50.641 312 153 1 29 340 48 358 1.95e-114 344
MS.gene62057.t1 MTR_4g067040 49.422 346 170 4 29 371 39 382 2.82e-114 343
MS.gene62057.t1 MTR_4g066240 46.015 389 191 5 23 394 35 421 3.17e-114 345
MS.gene62057.t1 MTR_4g067040 49.422 346 170 4 29 371 39 382 3.53e-114 343
MS.gene62057.t1 MTR_6g078330 43.532 402 206 7 103 487 15 412 2.09e-113 342
MS.gene62057.t1 MTR_3g028720 45.052 384 190 6 29 394 43 423 4.35e-113 342
MS.gene62057.t1 MTR_7g033860 39.195 472 258 8 29 483 53 512 1.43e-111 341
MS.gene62057.t1 MTR_3g026400 50.629 318 155 2 23 339 36 352 8.53e-111 334
MS.gene62057.t1 MTR_0108s0030 39.394 462 253 9 29 483 8 449 5.25e-110 335
MS.gene62057.t1 MTR_6g078330 49.846 325 160 3 20 341 33 357 1.50e-109 331
MS.gene62057.t1 MTR_3g028720 46.821 346 179 4 29 371 43 386 4.38e-109 330
MS.gene62057.t1 MTR_4g066640 48.563 348 168 6 29 371 44 385 7.82e-109 329
MS.gene62057.t1 MTR_7g068900 39.762 420 228 7 85 489 16 425 8.08e-106 325
MS.gene62057.t1 MTR_4g016920 39.268 410 231 5 91 489 1 403 3.90e-104 318
MS.gene62057.t1 MTR_1g088630 37.500 456 241 10 43 487 14 436 1.21e-97 303
MS.gene62057.t1 MTR_7g051510 36.534 479 264 10 29 488 80 537 2.63e-97 305
MS.gene62057.t1 MTR_7g051610 35.714 476 262 11 29 483 80 532 1.77e-92 292
MS.gene62057.t1 MTR_7g051650 36.786 473 262 9 29 483 80 533 2.25e-92 292
MS.gene62057.t1 MTR_7g051650 36.364 473 260 9 29 483 80 529 3.38e-91 289
MS.gene62057.t1 MTR_1g088630 41.765 340 168 6 3 340 7 318 1.97e-83 263
MS.gene62057.t1 MTR_7g056747 37.562 402 234 7 86 483 10 398 3.03e-83 264
MS.gene62057.t1 MTR_0110s0020 53.363 223 103 1 29 251 48 269 3.82e-82 258
MS.gene62057.t1 MTR_1g088630 45.455 286 150 4 3 286 7 288 1.89e-78 248
MS.gene62057.t1 MTR_4g016920 41.608 286 165 2 91 375 1 285 1.23e-76 244
MS.gene62057.t1 MTR_4g122980 25.522 431 250 12 87 507 183 552 8.52e-31 126
MS.gene62057.t1 MTR_8g038650 36.000 100 64 0 246 345 56 155 2.94e-16 76.6
MS.gene62057.t1 MTR_5g069350 34.228 149 54 6 355 484 66 189 2.18e-15 75.1
MS.gene62057.t1 MTR_2g022730 43.056 72 39 1 369 438 33 104 3.54e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62057.t1 AT1G61810 61.006 477 170 3 25 485 34 510 0.0 618
MS.gene62057.t1 AT1G61820 60.587 477 172 3 25 485 31 507 0.0 617
MS.gene62057.t1 AT4G21760 60.128 469 178 3 27 491 57 520 0.0 609
MS.gene62057.t1 AT4G21760 59.081 479 177 3 27 491 57 530 0.0 603
MS.gene62057.t1 AT1G61810 60.823 462 165 3 25 470 34 495 0.0 597
MS.gene62057.t1 AT1G61810 59.756 410 150 2 91 485 1 410 0.0 523
MS.gene62057.t1 AT1G61810 60.881 386 135 3 25 394 34 419 4.58e-172 492
MS.gene62057.t1 AT1G61820 58.152 368 139 2 133 485 1 368 5.59e-160 459
MS.gene62057.t1 AT1G26560 48.734 474 219 8 29 482 37 506 1.53e-155 453
MS.gene62057.t1 AT3G18080 45.397 478 229 5 29 485 44 510 2.86e-151 442
MS.gene62057.t1 AT5G54570 46.570 481 236 7 21 482 27 505 2.63e-144 426
MS.gene62057.t1 AT3G18070 44.068 472 244 5 29 486 35 500 4.58e-144 424
MS.gene62057.t1 AT3G18070 43.856 472 239 5 29 486 35 494 5.80e-143 421
MS.gene62057.t1 AT2G44450 45.397 478 236 7 29 488 36 506 2.57e-140 414
MS.gene62057.t1 AT2G44480 45.551 472 238 5 29 483 40 509 3.58e-140 414
MS.gene62057.t1 AT2G44480 45.551 472 238 5 29 483 71 540 8.88e-140 414
MS.gene62057.t1 AT2G25630 46.436 463 233 8 29 486 35 487 1.51e-139 412
MS.gene62057.t1 AT5G44640 44.444 477 239 8 29 486 36 505 9.07e-138 408
MS.gene62057.t1 AT5G42260 45.416 469 230 8 29 478 36 497 9.63e-137 405
MS.gene62057.t1 AT3G60130 44.397 473 237 8 29 482 35 500 4.39e-135 401
MS.gene62057.t1 AT1G02850 43.617 470 234 8 29 482 31 485 4.53e-133 395
MS.gene62057.t1 AT3G60140 41.109 523 288 7 5 507 7 529 4.74e-133 398
MS.gene62057.t1 AT4G27830 41.582 493 268 8 1 482 1 484 5.07e-133 395
MS.gene62057.t1 AT5G24550 42.917 480 255 7 24 484 32 511 6.13e-132 394
MS.gene62057.t1 AT5G36890 44.515 474 228 8 29 482 21 479 1.41e-131 391
MS.gene62057.t1 AT5G36890 44.515 474 228 8 29 482 21 479 2.04e-131 391
MS.gene62057.t1 AT1G61810 66.792 265 87 1 25 288 34 298 4.60e-131 383
MS.gene62057.t1 AT4G27820 42.678 478 251 7 17 482 16 482 8.32e-131 390
MS.gene62057.t1 AT1G02850 41.785 493 233 9 29 482 31 508 3.21e-128 384
MS.gene62057.t1 AT1G02850 41.700 494 233 10 29 482 31 509 1.29e-126 380
MS.gene62057.t1 AT5G24540 43.125 480 254 7 24 484 32 511 8.68e-126 378
MS.gene62057.t1 AT2G44470 39.883 514 275 8 21 508 26 531 4.39e-124 375
MS.gene62057.t1 AT5G54570 45.902 427 212 5 21 430 27 451 7.43e-124 370
MS.gene62057.t1 AT2G44460 42.147 503 269 9 21 505 26 524 2.08e-123 374
MS.gene62057.t1 AT1G60090 39.388 490 278 6 2 482 3 482 4.03e-122 367
MS.gene62057.t1 AT4G22100 40.851 470 258 6 29 487 27 487 1.38e-121 366
MS.gene62057.t1 AT1G47600 41.458 480 255 8 21 484 42 511 2.35e-121 366
MS.gene62057.t1 AT1G60090 38.945 493 283 8 2 482 3 489 3.24e-121 365
MS.gene62057.t1 AT1G47600 41.545 479 255 8 21 484 42 510 4.30e-121 365
MS.gene62057.t1 AT1G02850 41.277 470 218 9 29 482 31 458 1.03e-120 363
MS.gene62057.t1 AT1G51470 41.250 480 256 8 21 484 42 511 2.26e-120 363
MS.gene62057.t1 AT3G62750 40.042 477 256 8 17 482 16 473 7.20e-120 362
MS.gene62057.t1 AT3G62750 40.042 477 256 8 17 482 42 499 1.65e-119 362
MS.gene62057.t1 AT2G44480 44.254 409 210 4 91 483 1 407 5.51e-119 356
MS.gene62057.t1 AT3G60130 44.554 404 210 7 86 482 41 437 5.20e-117 353
MS.gene62057.t1 AT5G54570 44.634 410 207 6 91 482 1 408 1.18e-116 351
MS.gene62057.t1 AT2G32860 40.417 480 263 8 29 487 99 576 2.62e-116 356
MS.gene62057.t1 AT1G45191 37.172 495 290 6 4 487 10 494 4.68e-116 352
MS.gene62057.t1 AT1G45191 37.628 489 290 6 4 487 10 488 9.45e-116 351
MS.gene62057.t1 AT3G60130 43.373 415 210 7 86 482 41 448 3.71e-115 348
MS.gene62057.t1 AT1G45191 37.600 500 286 7 4 487 10 499 7.16e-115 349
MS.gene62057.t1 AT5G26000 41.548 491 260 10 24 493 38 522 2.13e-114 349
MS.gene62057.t1 AT2G32860 40.956 481 258 10 29 487 99 575 3.07e-114 351
MS.gene62057.t1 AT1G45191 37.205 508 289 7 4 487 10 511 2.59e-113 346
MS.gene62057.t1 AT5G25980 41.152 486 256 12 19 482 45 522 7.07e-113 345
MS.gene62057.t1 AT3G62740 38.086 491 270 10 7 482 7 478 3.23e-112 342
MS.gene62057.t1 AT2G44490 38.922 501 279 13 29 505 19 516 5.17e-112 343
MS.gene62057.t1 AT3G60120 40.000 485 272 9 18 484 8 491 5.34e-112 343
MS.gene62057.t1 AT3G21370 40.123 486 263 10 21 482 30 511 1.65e-111 341
MS.gene62057.t1 AT3G18070 48.397 312 158 2 29 340 35 343 3.42e-109 330
MS.gene62057.t1 AT4G27830 40.447 403 222 6 91 482 1 396 8.94e-108 328
MS.gene62057.t1 AT1G66280 39.496 476 264 8 29 484 41 512 1.72e-106 328
MS.gene62057.t1 AT1G66270 39.286 476 265 8 29 484 41 512 7.93e-106 326
MS.gene62057.t1 AT3G09260 38.509 483 276 8 21 484 32 512 1.08e-105 326
MS.gene62057.t1 AT4G27820 41.089 404 219 6 91 482 1 397 2.14e-105 322
MS.gene62057.t1 AT4G27820 41.089 404 219 6 91 482 1 397 2.14e-105 322
MS.gene62057.t1 AT1G75940 39.175 485 255 11 29 482 42 517 2.77e-105 325
MS.gene62057.t1 AT1G02850 42.184 403 187 6 29 394 31 424 6.81e-105 321
MS.gene62057.t1 AT5G28510 38.398 487 276 8 21 484 36 521 2.34e-104 323
MS.gene62057.t1 AT1G66270 39.076 476 264 10 29 484 41 510 1.30e-102 318
MS.gene62057.t1 AT5G24540 41.371 423 231 5 24 429 32 454 1.39e-102 316
MS.gene62057.t1 AT2G44480 49.841 315 155 3 20 332 62 375 1.47e-102 313
MS.gene62057.t1 AT2G44470 39.492 433 230 6 21 429 26 450 1.89e-102 315
MS.gene62057.t1 AT3G60140 40.394 406 226 4 5 394 7 412 1.31e-101 313
MS.gene62057.t1 AT1G52400 38.066 486 273 11 20 482 35 515 1.64e-101 315
MS.gene62057.t1 AT1G52400 38.066 486 273 11 20 482 35 515 1.64e-101 315
MS.gene62057.t1 AT3G03640 35.849 530 307 11 1 499 1 528 2.43e-101 315
MS.gene62057.t1 AT3G62750 38.353 425 234 7 17 432 42 447 1.10e-97 303
MS.gene62057.t1 AT3G62750 38.710 403 221 7 91 482 1 388 6.57e-97 300
MS.gene62057.t1 AT3G62750 38.710 403 221 7 91 482 1 388 6.57e-97 300
MS.gene62057.t1 AT5G25980 40.139 431 231 10 19 430 45 467 3.83e-96 300
MS.gene62057.t1 AT5G25980 40.139 431 231 10 19 430 45 467 3.83e-96 300
MS.gene62057.t1 AT1G60270 43.544 333 182 3 3 333 1 329 2.30e-95 295
MS.gene62057.t1 AT5G26000 40.714 420 225 8 29 430 43 456 7.40e-95 296
MS.gene62057.t1 AT2G44470 45.171 321 173 3 21 338 26 346 8.51e-94 291
MS.gene62057.t1 AT3G62740 39.401 401 217 8 7 394 7 394 7.14e-93 290
MS.gene62057.t1 AT2G44450 41.436 362 189 5 143 488 1 355 4.17e-92 285
MS.gene62057.t1 AT3G62750 42.901 324 172 4 17 340 16 326 3.04e-91 283
MS.gene62057.t1 AT3G62750 42.901 324 172 4 17 340 16 326 3.04e-91 283
MS.gene62057.t1 AT3G62750 42.901 324 172 4 17 340 42 352 9.95e-90 282
MS.gene62057.t1 AT1G45191 40.909 330 189 3 4 333 10 333 2.13e-89 280
MS.gene62057.t1 AT1G45191 40.909 330 189 3 4 333 10 333 2.28e-89 280
MS.gene62057.t1 AT3G18070 40.541 333 181 3 168 486 94 423 7.23e-87 274
MS.gene62057.t1 AT3G18070 55.357 56 25 0 29 84 35 90 1.78e-12 69.7
MS.gene62057.t1 AT1G52400 37.123 431 245 9 20 429 35 460 5.38e-83 265
MS.gene62057.t1 AT3G18070 40.256 313 170 3 188 486 2 311 6.95e-81 255
MS.gene62057.t1 AT2G44460 40.314 382 207 8 141 505 1 378 2.41e-80 258
MS.gene62057.t1 AT5G48375 36.077 413 193 8 52 448 54 411 2.06e-76 247
MS.gene62057.t1 AT1G51490 40.845 355 191 11 32 381 28 368 6.24e-73 238
MS.gene62057.t1 AT1G60270 43.210 243 137 1 91 333 1 242 6.55e-71 228
MS.gene62057.t1 AT2G44480 38.870 301 167 3 198 483 5 303 2.71e-69 224
MS.gene62057.t1 AT3G18070 39.167 240 133 1 168 394 94 333 3.80e-57 194
MS.gene62057.t1 AT3G18070 55.357 56 25 0 29 84 35 90 8.93e-13 70.1
MS.gene62057.t1 AT3G18070 38.636 220 122 1 188 394 2 221 3.79e-51 174
MS.gene62057.t1 AT5G16580 33.798 287 174 6 162 440 21 299 2.62e-44 158
MS.gene62057.t1 AT3G06510 25.840 387 222 11 86 463 159 489 1.98e-27 116
MS.gene62057.t1 AT3G06510 25.485 412 226 14 86 463 159 523 4.40e-25 109

Find 120 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTTCCTTGGTGTTATT+TGG 0.081941 8.2:+3329003 None:intergenic
TTTGTCGTTACTGGAAAATT+TGG 0.210997 8.2:+3329507 None:intergenic
TGTCGCTGCTCCCGCAAATT+TGG 0.214872 8.2:-3330277 MS.gene62057:CDS
TACCAACTAGCTGACAATTT+TGG 0.228855 8.2:+3328690 None:intergenic
AAAATCACCTCCATCTCTTT+TGG 0.232607 8.2:+3329544 None:intergenic
CTCGTATCCGTGTCATGTTC+TGG 0.251671 8.2:+3328627 None:intergenic
GACAACTTTGAGTGGCTATT+TGG 0.252310 8.2:-3328768 MS.gene62057:CDS
TTTCCATCCAACTTTCTCTT+TGG 0.260893 8.2:-3331515 MS.gene62057:CDS
ACAGGAGGATGTAGATTTAA+TGG 0.268522 8.2:-3330937 MS.gene62057:intron
CCAAGTGAAACTTGGAGATT+TGG 0.292516 8.2:+3330325 None:intergenic
CACTGCTTCTTCTGCCTACC+AGG 0.320999 8.2:-3331492 MS.gene62057:intron
GACTGGTCACTTAGATAATC+TGG 0.322076 8.2:-3328950 MS.gene62057:CDS
CTGGTATTGACTACTATAAT+AGG 0.334064 8.2:-3330720 MS.gene62057:CDS
GCTGAGCAGGGAGGACAAAT+TGG 0.348657 8.2:-3329970 MS.gene62057:CDS
ATGTTCTGGATTACTGCTTT+CGG 0.369526 8.2:+3328641 None:intergenic
CTGTGAGCAGAAGGTAGATT+TGG 0.371053 8.2:-3330757 MS.gene62057:intron
GTTTCACTTGGTTACCGAAA+TGG 0.373316 8.2:-3330313 MS.gene62057:CDS
TTATTCACTACCTATGCTCT+TGG 0.374400 8.2:-3331575 MS.gene62057:CDS
TTGTCGTTACTGGAAAATTT+GGG 0.378693 8.2:+3329508 None:intergenic
CGCTACAATTTCCAAATTTG+CGG 0.390612 8.2:+3330266 None:intergenic
ACCAGTTGCTCACTGTGATT+GGG 0.394203 8.2:+3330504 None:intergenic
AACCAGTTGCTCACTGTGAT+TGG 0.401532 8.2:+3330503 None:intergenic
GCTACAATTTCCAAATTTGC+GGG 0.406017 8.2:+3330267 None:intergenic
TGATCAATATCATCGGTATC+TGG 0.408911 8.2:-3331168 MS.gene62057:intron
CATGTGATAGGATAATATTA+TGG 0.409137 8.2:+3330209 None:intergenic
CAAGAACTTGACGACAGATA+TGG 0.410450 8.2:-3330541 MS.gene62057:CDS
TCTATAATAATGCAGGATCT+TGG 0.411513 8.2:-3329590 MS.gene62057:intron
CAACTGCAGCTGCATGTGAT+AGG 0.416110 8.2:+3330197 None:intergenic
ATGACACGGATACGAGAAAC+TGG 0.424883 8.2:-3328620 MS.gene62057:CDS
ATGGTGGGTGTTTACCATTT+CGG 0.426254 8.2:+3330299 None:intergenic
AATCGAGGACTCGATTTCAT+TGG 0.429047 8.2:-3329475 MS.gene62057:CDS
GGGTACTTGCCGAAGAAGAT+TGG 0.431182 8.2:+3329565 None:intergenic
AATATTATGGGCTGCTACAA+AGG 0.431696 8.2:+3330222 None:intergenic
TTCGGTAACCAAGTGAAACT+TGG 0.437487 8.2:+3330317 None:intergenic
GCATTGTCGTACACGTTGAC+TGG 0.438002 8.2:-3329948 MS.gene62057:CDS
GTTTGAACCGTTTAGCAATT+CGG 0.441412 8.2:-3329926 MS.gene62057:CDS
ATATCATCAATGTGTGAGTC+TGG 0.444978 8.2:-3329415 MS.gene62057:CDS
ATCTTGGATCCAATCTTCTT+CGG 0.447074 8.2:-3329574 MS.gene62057:CDS
ACGCTGCATCCAGGCTGAGC+AGG 0.461536 8.2:-3329983 MS.gene62057:intron
CCAATGTTCATTACTGAGAA+TGG 0.464727 8.2:-3329138 MS.gene62057:intron
ATCATTAAGACATTCTTCCT+TGG 0.465143 8.2:+3328993 None:intergenic
CTCAATCATTCAGCATGAAC+TGG 0.467873 8.2:-3329876 MS.gene62057:intron
CCAAATCTCCAAGTTTCACT+TGG 0.472557 8.2:-3330325 MS.gene62057:CDS
GTGCTTACAAGCTCTCCAAT+GGG 0.474734 8.2:+3329334 None:intergenic
ATTGGCATCAATCATTATGC+AGG 0.475815 8.2:-3329457 MS.gene62057:CDS
AAGAGAAAGTTGGATGGAAA+AGG 0.476077 8.2:+3331518 None:intergenic
ATATTATGGGCTGCTACAAA+GGG 0.484402 8.2:+3330223 None:intergenic
ATGTGATAGGATAATATTAT+GGG 0.491989 8.2:+3330210 None:intergenic
TTTGGAGAAGTCAACTTGGC+TGG 0.504319 8.2:-3330739 MS.gene62057:CDS
ATCTGTCGTCAAGTTCTTGA+GGG 0.506725 8.2:+3330545 None:intergenic
AACTTAATATTATAGTATGA+AGG 0.507201 8.2:-3331401 MS.gene62057:intron
ATGTGAGAGGATACTTTGCC+TGG 0.508878 8.2:-3328800 MS.gene62057:CDS
ATGGCAAAGGATTGAGTGAC+TGG 0.510545 8.2:-3331364 MS.gene62057:CDS
TCAGCTACCGAATTGCTAAA+CGG 0.512445 8.2:+3329919 None:intergenic
ACTGGTCACTTAGATAATCT+GGG 0.513194 8.2:-3328949 MS.gene62057:CDS
CTATCAAAGTCAACAGCTAC+CGG 0.515390 8.2:-3330911 MS.gene62057:CDS
TTGGTGACAGAGTTAAGTAC+TGG 0.515563 8.2:-3330363 MS.gene62057:CDS
AAACTGGAACAAACAATTCA+AGG 0.521421 8.2:-3328604 MS.gene62057:CDS
AGCAGTGCCAAAGAGAAAGT+TGG 0.523449 8.2:+3331508 None:intergenic
TCTACTACCCTCTGAGCCTA+CGG 0.523808 8.2:+3328566 None:intergenic
CGCTGCATCCAGGCTGAGCA+GGG 0.527593 8.2:-3329982 MS.gene62057:intron
AAGTGAAACAATGTAACAAA+CGG 0.528983 8.2:+3330574 None:intergenic
CTCCAAAATTGTCAGCTAGT+TGG 0.530460 8.2:-3328692 MS.gene62057:CDS
TTGCCCACGAAATTGAAAAC+CGG 0.531948 8.2:+3330892 None:intergenic
GAGATTTGGTTCATTGAATG+TGG 0.532609 8.2:+3330339 None:intergenic
CTGTTACCTATGTGAAGGAC+AGG 0.533086 8.2:-3329173 MS.gene62057:CDS
CTTAGAACCGTAGGCTCAGA+GGG 0.534583 8.2:-3328573 None:intergenic
CCTTGCTTGACAACTTTGAG+TGG 0.544158 8.2:-3328776 MS.gene62057:CDS
ATTGTACCTGTCCTTCACAT+AGG 0.545267 8.2:+3329167 None:intergenic
CCATTCTCAGTAATGAACAT+TGG 0.554982 8.2:+3329138 None:intergenic
AGTGCTTACAAGCTCTCCAA+TGG 0.557979 8.2:+3329333 None:intergenic
GTATAAACCCTCTGTTGTGG+AGG 0.558557 8.2:+3329384 None:intergenic
GAAACAATGTAACAAACGGT+TGG 0.558611 8.2:+3330578 None:intergenic
AAAAGAATAAACTACATGAC+TGG 0.562119 8.2:-3328967 MS.gene62057:CDS
TGAGAATGCTCCAAGAGCAT+AGG 0.565601 8.2:+3331565 None:intergenic
AAAGTTGTCAAGCAAGGACC+AGG 0.567557 8.2:+3328782 None:intergenic
GCAAATATGCTTAGAACCGT+AGG 0.568060 8.2:-3328582 MS.gene62057:CDS
AAATTTGGAAATTGTAGCGA+GGG 0.575693 8.2:-3330262 MS.gene62057:CDS
AGGGAAGGAGCAGATGTGAG+AGG 0.576362 8.2:-3328813 MS.gene62057:CDS
TTGACGACAGATATGGAGGT+TGG 0.586833 8.2:-3330534 MS.gene62057:CDS
TATCTGTCGTCAAGTTCTTG+AGG 0.589618 8.2:+3330544 None:intergenic
ATCGACGCTTTGCTACTCAA+AGG 0.594955 8.2:-3330694 MS.gene62057:intron
TGCGGGAGCAGCGACATGGT+GGG 0.596391 8.2:+3330284 None:intergenic
CAAGGAACCTCCACAACAGA+GGG 0.596892 8.2:-3329391 MS.gene62057:CDS
CGGCAAGTACCCAAAAGAGA+TGG 0.598644 8.2:-3329554 MS.gene62057:CDS
GAAAACTGTTACCTATGTGA+AGG 0.598748 8.2:-3329178 MS.gene62057:CDS
TTGCGGGAGCAGCGACATGG+TGG 0.599395 8.2:+3330283 None:intergenic
CCAGTTGCTCACTGTGATTG+GGG 0.602755 8.2:+3330505 None:intergenic
TAGATTTGGAGAAGTCAACT+TGG 0.607687 8.2:-3330743 MS.gene62057:CDS
TTGGTATAAACCCTCTGTTG+TGG 0.608835 8.2:+3329381 None:intergenic
GTGCCAAAGAGAAAGTTGGA+TGG 0.621854 8.2:+3331512 None:intergenic
TAGCGAGGGAGATTCAGAGA+AGG 0.625947 8.2:-3330248 MS.gene62057:CDS
AGTACTGATGATGGAAGTAA+CGG 0.629271 8.2:-3331203 MS.gene62057:CDS
GCTTAGAACCGTAGGCTCAG+AGG 0.630554 8.2:-3328574 MS.gene62057:CDS
CAGTAATCCAGAACATGACA+CGG 0.631088 8.2:-3328634 MS.gene62057:CDS
CCACTCAAAGTTGTCAAGCA+AGG 0.631883 8.2:+3328776 None:intergenic
TTACTGTTGATCAATATCAT+CGG 0.633059 8.2:-3331175 MS.gene62057:CDS
AATTTGCGGGAGCAGCGACA+TGG 0.635985 8.2:+3330280 None:intergenic
CTGGTCACTTAGATAATCTG+GGG 0.638340 8.2:-3328948 MS.gene62057:CDS
TCAATGTGTGAGTCTGGGCA+AGG 0.639903 8.2:-3329409 MS.gene62057:CDS
GTACTTAACTCTGTCACCAA+AGG 0.643194 8.2:+3330366 None:intergenic
TATCATCAATGTGTGAGTCT+GGG 0.645232 8.2:-3329414 MS.gene62057:CDS
CAAGTACCCAAAAGAGATGG+AGG 0.647849 8.2:-3329551 MS.gene62057:CDS
GAAGGTGCTTACTTGAGTGA+TGG 0.651168 8.2:-3331383 MS.gene62057:CDS
CAAATTTGGAAATTGTAGCG+AGG 0.653756 8.2:-3330263 MS.gene62057:CDS
GAACTTGACGACAGATATGG+AGG 0.657453 8.2:-3330538 MS.gene62057:CDS
AGAAGGTAAAGAAACCTGGT+AGG 0.658277 8.2:+3331478 None:intergenic
TGGAGCATTCTCATTCTCAG+AGG 0.661583 8.2:-3331555 MS.gene62057:CDS
GCTTACTTGAGTGATGGCAA+AGG 0.664601 8.2:-3331377 MS.gene62057:CDS
TGCATCCAGGCTGAGCAGGG+AGG 0.666984 8.2:-3329979 MS.gene62057:intron
TATTTATAGAAACAAATACC+AGG 0.672534 8.2:-3330173 MS.gene62057:intron
GATGTCTTCACTCATAAACC+AGG 0.676578 8.2:-3331341 MS.gene62057:intron
TCTGCGTAGCAAAATCAACA+TGG 0.676856 8.2:+3328721 None:intergenic
GACAAAGCAAAACTGAATCG+AGG 0.686534 8.2:-3329490 MS.gene62057:CDS
GCAAGGAACCTCCACAACAG+AGG 0.691222 8.2:-3329392 MS.gene62057:CDS
TGGCAAAGGATTGAGTGACT+GGG 0.697528 8.2:-3331363 MS.gene62057:CDS
TGCTTACAAGCTCTCCAATG+GGG 0.708162 8.2:+3329335 None:intergenic
TATTATGGGCTGCTACAAAG+GGG 0.721105 8.2:+3330224 None:intergenic
GTATGATCCAAATAACACCA+AGG 0.728521 8.2:-3329010 MS.gene62057:CDS
TGGTCACTTAGATAATCTGG+GGG 0.736530 8.2:-3328947 MS.gene62057:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAAAATGTAACTAA+TGG + chr8.2:3330883-3330902 None:intergenic 10.0%
!!! ATTAAAATAATGAAGATTTT+AGG + chr8.2:3328733-3328752 None:intergenic 10.0%
!!! TAATAACATATATTTTTTTC+AGG - chr8.2:3328946-3328965 MS.gene62057:CDS 10.0%
!!! TTCATTATTTTAATTAATCA+TGG - chr8.2:3328739-3328758 MS.gene62057:CDS 10.0%
!! AACTTAATATTATAGTATGA+AGG - chr8.2:3328772-3328791 MS.gene62057:CDS 15.0%
!! ACATTTAGACCATATATAAT+GGG + chr8.2:3329201-3329220 None:intergenic 20.0%
!! ATGTGATAGGATAATATTAT+GGG + chr8.2:3329966-3329985 None:intergenic 20.0%
!! GTAATTAGTTAAAGTAGATA+AGG + chr8.2:3329177-3329196 None:intergenic 20.0%
!! TATTTATAGAAACAAATACC+AGG - chr8.2:3330000-3330019 MS.gene62057:intron 20.0%
!! TGTCAATTTGTAATAAAAAC+AGG - chr8.2:3329218-3329237 MS.gene62057:intron 20.0%
!!! AAAATCCAATTTAGTTTAAG+AGG - chr8.2:3329088-3329107 MS.gene62057:intron 20.0%
!!! CACATCATAATACTATTTTT+TGG - chr8.2:3329030-3329049 MS.gene62057:intron 20.0%
!!! TAAATTGGATTTTGATTATG+AGG + chr8.2:3329081-3329100 None:intergenic 20.0%
! AAAAGAATAAACTACATGAC+TGG - chr8.2:3331206-3331225 MS.gene62057:CDS 25.0%
! AACAATACAACTTTCAAGAT+TGG + chr8.2:3330927-3330946 None:intergenic 25.0%
! AAGTGAAACAATGTAACAAA+CGG + chr8.2:3329602-3329621 None:intergenic 25.0%
! ACAATACAACTTTCAAGATT+GGG + chr8.2:3330926-3330945 None:intergenic 25.0%
! ACATCAAAGTTATCGATATA+TGG - chr8.2:3331284-3331303 MS.gene62057:intron 25.0%
! AGGTATTCAAGTATGAAAAA+TGG + chr8.2:3328892-3328911 None:intergenic 25.0%
! CAATTTGTAATAAAAACAGG+AGG - chr8.2:3329221-3329240 MS.gene62057:intron 25.0%
! CATGTGATAGGATAATATTA+TGG + chr8.2:3329967-3329986 None:intergenic 25.0%
! CGATAACTTTGATGTTTATT+CGG + chr8.2:3331279-3331298 None:intergenic 25.0%
! CTAATTACACCCATTATATA+TGG - chr8.2:3329189-3329208 MS.gene62057:intron 25.0%
! GACATTTAGACCATATATAA+TGG + chr8.2:3329202-3329221 None:intergenic 25.0%
! GTCAAAATACATTATAATGC+TGG + chr8.2:3329741-3329760 None:intergenic 25.0%
! TAACTAATGGAATCATCAAA+AGG + chr8.2:3330870-3330889 None:intergenic 25.0%
! TGGTTGAAATTCAATGAAAA+TGG + chr8.2:3331088-3331107 None:intergenic 25.0%
! TGTAACCTCTTAAACTAAAT+TGG + chr8.2:3329096-3329115 None:intergenic 25.0%
! TTACTGTTGATCAATATCAT+CGG - chr8.2:3328998-3329017 MS.gene62057:CDS 25.0%
!!! AATGTATTTTGACATGTACA+GGG - chr8.2:3329748-3329767 MS.gene62057:intron 25.0%
!!! GACATATGTTTTAAATCCTT+TGG - chr8.2:3329791-3329810 MS.gene62057:intron 25.0%
!!! TAATGTATTTTGACATGTAC+AGG - chr8.2:3329747-3329766 MS.gene62057:intron 25.0%
!!! TCACTTTTGACTTCATATTT+TGG - chr8.2:3330440-3330459 MS.gene62057:intron 25.0%
!!! TTTGGTTTTACAGTGAAATT+TGG - chr8.2:3331423-3331442 MS.gene62057:intron 25.0%
AAACTGGAACAAACAATTCA+AGG - chr8.2:3331569-3331588 MS.gene62057:CDS 30.0%
AAATAGCTGAGTATTTGTGT+TGG - chr8.2:3331325-3331344 MS.gene62057:intron 30.0%
AAATTTGGAAATTGTAGCGA+GGG - chr8.2:3329911-3329930 MS.gene62057:CDS 30.0%
AATGGTTCAAATCATGTGAT+TGG - chr8.2:3330506-3330525 MS.gene62057:intron 30.0%
AGACTGAAATCTTGATCAAA+TGG - chr8.2:3330488-3330507 MS.gene62057:intron 30.0%
ATCATTAAGACATTCTTCCT+TGG + chr8.2:3331183-3331202 None:intergenic 30.0%
ATTATGTAATTACGCAACTC+AGG + chr8.2:3328930-3328949 None:intergenic 30.0%
GTTTGACTCTATAATAATGC+AGG - chr8.2:3330576-3330595 MS.gene62057:CDS 30.0%
TAAACATTGAGCCAATCAAA+TGG + chr8.2:3330961-3330980 None:intergenic 30.0%
TACCATGCAAAAGTTTGATT+TGG - chr8.2:3330363-3330382 MS.gene62057:CDS 30.0%
TACTCTGACTTTAGTAAATC+AGG + chr8.2:3330466-3330485 None:intergenic 30.0%
TCTATAATAATGCAGGATCT+TGG - chr8.2:3330583-3330602 MS.gene62057:CDS 30.0%
TCTGTGTAAGAGACTAATAA+TGG + chr8.2:3331108-3331127 None:intergenic 30.0%
TTAGGAGATAAACATGAAGA+AGG + chr8.2:3328715-3328734 None:intergenic 30.0%
TTATCGATATATGGTTTACC+TGG - chr8.2:3331293-3331312 MS.gene62057:intron 30.0%
TTGTCGTTACTGGAAAATTT+GGG + chr8.2:3330668-3330687 None:intergenic 30.0%
TTTGTCGTTACTGGAAAATT+TGG + chr8.2:3330669-3330688 None:intergenic 30.0%
! ATCCAAATCAAACTTTTGCA+TGG + chr8.2:3330368-3330387 None:intergenic 30.0%
! GGTCTTTTTACTATATTACC+TGG + chr8.2:3330021-3330040 None:intergenic 30.0%
! TATTGACACAACACTTGTTA+AGG + chr8.2:3329120-3329139 None:intergenic 30.0%
! TGATGTTTATTCGGTTTTTG+TGG + chr8.2:3331270-3331289 None:intergenic 30.0%
!! CTGGTATTGACTACTATAAT+AGG - chr8.2:3329453-3329472 MS.gene62057:CDS 30.0%
!! TCTATCCGAATGTTTTTGTA+GGG - chr8.2:3331129-3331148 MS.gene62057:intron 30.0%
AAGAGAAAGTTGGATGGAAA+AGG + chr8.2:3328658-3328677 None:intergenic 35.0%
ACAGGAGGATGTAGATTTAA+TGG - chr8.2:3329236-3329255 MS.gene62057:intron 35.0%
ACTGGTCACTTAGATAATCT+GGG - chr8.2:3331224-3331243 MS.gene62057:intron 35.0%
ATATCATCAATGTGTGAGTC+TGG - chr8.2:3330758-3330777 MS.gene62057:intron 35.0%
ATCTTGGATCCAATCTTCTT+CGG - chr8.2:3330599-3330618 MS.gene62057:intron 35.0%
ATGAAGAAGGTAAAGAAACC+TGG + chr8.2:3328702-3328721 None:intergenic 35.0%
ATGCTGGTAAAGTATGACAA+AGG + chr8.2:3329725-3329744 None:intergenic 35.0%
ATGTGTAGACTCCATTTGAT+TGG - chr8.2:3330947-3330966 MS.gene62057:intron 35.0%
ATTGGCATCAATCATTATGC+AGG - chr8.2:3330716-3330735 MS.gene62057:CDS 35.0%
CAAATTTGGAAATTGTAGCG+AGG - chr8.2:3329910-3329929 MS.gene62057:CDS 35.0%
CAACAAACTGCACAAAAAGA+TGG - chr8.2:3330812-3330831 MS.gene62057:intron 35.0%
CCAATGTTCATTACTGAGAA+TGG - chr8.2:3331035-3331054 MS.gene62057:intron 35.0%
CCATACCCTACAAAAACATT+CGG + chr8.2:3331137-3331156 None:intergenic 35.0%
CCATTCTCAGTAATGAACAT+TGG + chr8.2:3331038-3331057 None:intergenic 35.0%
CGCTACAATTTCCAAATTTG+CGG + chr8.2:3329910-3329929 None:intergenic 35.0%
GAAAACTGTTACCTATGTGA+AGG - chr8.2:3330995-3331014 MS.gene62057:intron 35.0%
GAAACAATGTAACAAACGGT+TGG + chr8.2:3329598-3329617 None:intergenic 35.0%
GAAATGTTGTTATCATGACC+TGG + chr8.2:3328853-3328872 None:intergenic 35.0%
GCTACAATTTCCAAATTTGC+GGG + chr8.2:3329909-3329928 None:intergenic 35.0%
GTATGATCCAAATAACACCA+AGG - chr8.2:3331163-3331182 MS.gene62057:intron 35.0%
GTTAAATCAAGATGCGTACT+TGG + chr8.2:3329315-3329334 None:intergenic 35.0%
GTTTGAACCGTTTAGCAATT+CGG - chr8.2:3330247-3330266 MS.gene62057:CDS 35.0%
TACAACTTTCAAGATTGGGT+TGG + chr8.2:3330922-3330941 None:intergenic 35.0%
TAGAGTCAAACTTCATGATC+AGG + chr8.2:3330567-3330586 None:intergenic 35.0%
TAGATTTGGAGAAGTCAACT+TGG - chr8.2:3329430-3329449 MS.gene62057:CDS 35.0%
TATCATCAATGTGTGAGTCT+GGG - chr8.2:3330759-3330778 MS.gene62057:intron 35.0%
TCAGGTGATTGAATGAATGA+AGG + chr8.2:3328912-3328931 None:intergenic 35.0%
TGATCAATATCATCGGTATC+TGG - chr8.2:3329005-3329024 MS.gene62057:CDS 35.0%
TTATTCACTACCTATGCTCT+TGG - chr8.2:3328598-3328617 MS.gene62057:CDS 35.0%
TTTCCATCCAACTTTCTCTT+TGG - chr8.2:3328658-3328677 MS.gene62057:CDS 35.0%
! AAAATCACCTCCATCTCTTT+TGG + chr8.2:3330632-3330651 None:intergenic 35.0%
! AAAGAGATGGAGGTGATTTT+AGG - chr8.2:3330632-3330651 MS.gene62057:intron 35.0%
! AAATCACCTCCATCTCTTTT+GGG + chr8.2:3330631-3330650 None:intergenic 35.0%
! AATATTATGGGCTGCTACAA+AGG + chr8.2:3329954-3329973 None:intergenic 35.0%
! ATATTATGGGCTGCTACAAA+GGG + chr8.2:3329953-3329972 None:intergenic 35.0%
! ATGTTCTGGATTACTGCTTT+CGG + chr8.2:3331535-3331554 None:intergenic 35.0%
! CATCTTTTTGTGCAGTTTGT+TGG + chr8.2:3330814-3330833 None:intergenic 35.0%
! GAGATTTGGTTCATTGAATG+TGG + chr8.2:3329837-3329856 None:intergenic 35.0%
! TACCAACTAGCTGACAATTT+TGG + chr8.2:3331486-3331505 None:intergenic 35.0%
!! AGTACTGATGATGGAAGTAA+CGG - chr8.2:3328970-3328989 MS.gene62057:CDS 35.0%
!! CATTCTTCCTTGGTGTTATT+TGG + chr8.2:3331173-3331192 None:intergenic 35.0%
!! CTCTATCCGAATGTTTTTGT+AGG - chr8.2:3331128-3331147 MS.gene62057:intron 35.0%
!! GAGTATTTGTGTTGGTTATG+TGG - chr8.2:3331333-3331352 MS.gene62057:intron 35.0%
!!! TTTTCAGGTAGTACTGATGA+TGG - chr8.2:3328961-3328980 MS.gene62057:CDS 35.0%
AACTTTGTAGCAGCATGCTA+AGG - chr8.2:3330045-3330064 MS.gene62057:intron 40.0%
AATCGAGGACTCGATTTCAT+TGG - chr8.2:3330698-3330717 MS.gene62057:CDS 40.0%
AGAAGGTAAAGAAACCTGGT+AGG + chr8.2:3328698-3328717 None:intergenic 40.0%
AGTCAAACTTCATGATCAGG+TGG + chr8.2:3330564-3330583 None:intergenic 40.0%
ATCATTCAGCATGAACTGGT+AGG - chr8.2:3330301-3330320 MS.gene62057:CDS 40.0%
ATCTGTCGTCAAGTTCTTGA+GGG + chr8.2:3329631-3329650 None:intergenic 40.0%
ATTGTACCTGTCCTTCACAT+AGG + chr8.2:3331009-3331028 None:intergenic 40.0%
CAAGAACTTGACGACAGATA+TGG - chr8.2:3329632-3329651 MS.gene62057:intron 40.0%
CAGTAATCCAGAACATGACA+CGG - chr8.2:3331539-3331558 MS.gene62057:CDS 40.0%
CCAAATCTCCAAGTTTCACT+TGG - chr8.2:3329848-3329867 MS.gene62057:intron 40.0%
CCAAGTGAAACTTGGAGATT+TGG + chr8.2:3329851-3329870 None:intergenic 40.0%
CTATCAAAGTCAACAGCTAC+CGG - chr8.2:3329262-3329281 MS.gene62057:intron 40.0%
CTCAATCATTCAGCATGAAC+TGG - chr8.2:3330297-3330316 MS.gene62057:CDS 40.0%
CTCCAAAATTGTCAGCTAGT+TGG - chr8.2:3331481-3331500 MS.gene62057:intron 40.0%
CTGCAAGTATACAATTCGCA+GGG - chr8.2:3329570-3329589 MS.gene62057:CDS 40.0%
CTGGTCACTTAGATAATCTG+GGG - chr8.2:3331225-3331244 MS.gene62057:intron 40.0%
GACAAAGCAAAACTGAATCG+AGG - chr8.2:3330683-3330702 MS.gene62057:intron 40.0%
GACAACTTTGAGTGGCTATT+TGG - chr8.2:3331405-3331424 MS.gene62057:intron 40.0%
GATGTCTTCACTCATAAACC+AGG - chr8.2:3328832-3328851 MS.gene62057:intron 40.0%
GCAAATATGCTTAGAACCGT+AGG - chr8.2:3331591-3331610 MS.gene62057:CDS 40.0%
GTACTTAACTCTGTCACCAA+AGG + chr8.2:3329810-3329829 None:intergenic 40.0%
GTGAATTGACTAGAACACAC+AGG + chr8.2:3329378-3329397 None:intergenic 40.0%
GTTTCACTTGGTTACCGAAA+TGG - chr8.2:3329860-3329879 MS.gene62057:intron 40.0%
TATCTGTCGTCAAGTTCTTG+AGG + chr8.2:3329632-3329651 None:intergenic 40.0%
TCAGCTACCGAATTGCTAAA+CGG + chr8.2:3330257-3330276 None:intergenic 40.0%
TCCTCATTGTTCAATGTCCA+TGG - chr8.2:3330327-3330346 MS.gene62057:CDS 40.0%
TCTGCGTAGCAAAATCAACA+TGG + chr8.2:3331455-3331474 None:intergenic 40.0%
TGAGCTGTTCAATCTTGATC+TGG + chr8.2:3330423-3330442 None:intergenic 40.0%
TGGTCACTTAGATAATCTGG+GGG - chr8.2:3331226-3331245 MS.gene62057:intron 40.0%
TTCGGTAACCAAGTGAAACT+TGG + chr8.2:3329859-3329878 None:intergenic 40.0%
TTGCCCACGAAATTGAAAAC+CGG + chr8.2:3329284-3329303 None:intergenic 40.0%
TTGGCTCAATGTTTACCACA+AGG - chr8.2:3330966-3330985 MS.gene62057:intron 40.0%
TTGGTATAAACCCTCTGTTG+TGG + chr8.2:3330795-3330814 None:intergenic 40.0%
! ACAGTTTTCTTCATGCCTTG+TGG + chr8.2:3330984-3331003 None:intergenic 40.0%
! CAGTTTTGCTTTGTCGTTAC+TGG + chr8.2:3330678-3330697 None:intergenic 40.0%
! GACTGGTCACTTAGATAATC+TGG - chr8.2:3331223-3331242 MS.gene62057:intron 40.0%
! TATTATGGGCTGCTACAAAG+GGG + chr8.2:3329952-3329971 None:intergenic 40.0%
! TTGGTGACAGAGTTAAGTAC+TGG - chr8.2:3329810-3329829 MS.gene62057:intron 40.0%
!! ATGATCAGGTGGATTGTCTA+CGG + chr8.2:3330553-3330572 None:intergenic 40.0%
!! ATGGTGGGTGTTTACCATTT+CGG + chr8.2:3329877-3329896 None:intergenic 40.0%
!! CCGAATGTTTTTGTAGGGTA+TGG - chr8.2:3331134-3331153 MS.gene62057:intron 40.0%
!! GTGTTGGTTATGTGGCTATA+GGG - chr8.2:3331341-3331360 MS.gene62057:intron 40.0%
!! TGTGTTGGTTATGTGGCTAT+AGG - chr8.2:3331340-3331359 MS.gene62057:intron 40.0%
!! TTACTTTTAACGCTGCATCC+AGG - chr8.2:3330181-3330200 MS.gene62057:CDS 40.0%
!!! CTACCGGTTTTCAATTTCGT+GGG - chr8.2:3329278-3329297 MS.gene62057:intron 40.0%
AAAGTTGTCAAGCAAGGACC+AGG + chr8.2:3331394-3331413 None:intergenic 45.0%
AACCAGTTGCTCACTGTGAT+TGG + chr8.2:3329673-3329692 None:intergenic 45.0%
ACCAGTTGCTCACTGTGATT+GGG + chr8.2:3329672-3329691 None:intergenic 45.0%
AGCAGTGCCAAAGAGAAAGT+TGG + chr8.2:3328668-3328687 None:intergenic 45.0%
AGTGCTTACAAGCTCTCCAA+TGG + chr8.2:3330843-3330862 None:intergenic 45.0%
ATCGACGCTTTGCTACTCAA+AGG - chr8.2:3329479-3329498 MS.gene62057:CDS 45.0%
ATGACACGGATACGAGAAAC+TGG - chr8.2:3331553-3331572 MS.gene62057:CDS 45.0%
ATGGCAAAGGATTGAGTGAC+TGG - chr8.2:3328809-3328828 MS.gene62057:CDS 45.0%
ATGTGAGAGGATACTTTGCC+TGG - chr8.2:3331373-3331392 MS.gene62057:CDS 45.0%
CAAAAAGATGGTGTCCCCAT+TGG - chr8.2:3330824-3330843 MS.gene62057:intron 45.0%
CAAGTACCCAAAAGAGATGG+AGG - chr8.2:3330622-3330641 MS.gene62057:intron 45.0%
CATGCTGCTACAAAGTTGTG+AGG + chr8.2:3330042-3330061 None:intergenic 45.0%
CCACTCAAAGTTGTCAAGCA+AGG + chr8.2:3331400-3331419 None:intergenic 45.0%
CCTGCAAGTATACAATTCGC+AGG - chr8.2:3329569-3329588 MS.gene62057:CDS 45.0%
CCTGCGAATTGTATACTTGC+AGG + chr8.2:3329572-3329591 None:intergenic 45.0%
CCTTGCTTGACAACTTTGAG+TGG - chr8.2:3331397-3331416 MS.gene62057:intron 45.0%
CGCTTTGCTACTCAAAGGTT+TGG - chr8.2:3329484-3329503 MS.gene62057:CDS 45.0%
CTGTGAGCAGAAGGTAGATT+TGG - chr8.2:3329416-3329435 MS.gene62057:CDS 45.0%
CTGTTACCTATGTGAAGGAC+AGG - chr8.2:3331000-3331019 MS.gene62057:intron 45.0%
GAACTTGACGACAGATATGG+AGG - chr8.2:3329635-3329654 MS.gene62057:intron 45.0%
GCCATGGACATTGAACAATG+AGG + chr8.2:3330331-3330350 None:intergenic 45.0%
GCTTACTTGAGTGATGGCAA+AGG - chr8.2:3328796-3328815 MS.gene62057:CDS 45.0%
GTATAAACCCTCTGTTGTGG+AGG + chr8.2:3330792-3330811 None:intergenic 45.0%
GTGCCAAAGAGAAAGTTGGA+TGG + chr8.2:3328664-3328683 None:intergenic 45.0%
GTGCTTACAAGCTCTCCAAT+GGG + chr8.2:3330842-3330861 None:intergenic 45.0%
TGCTTACAAGCTCTCCAATG+GGG + chr8.2:3330841-3330860 None:intergenic 45.0%
TGGCAAAGGATTGAGTGACT+GGG - chr8.2:3328810-3328829 MS.gene62057:CDS 45.0%
TGGTTATGTGGCTATAGGGA+AGG - chr8.2:3331345-3331364 MS.gene62057:CDS 45.0%
TTGACGACAGATATGGAGGT+TGG - chr8.2:3329639-3329658 MS.gene62057:intron 45.0%
TTGCAATGACTGTGAGCAGA+AGG - chr8.2:3329407-3329426 MS.gene62057:CDS 45.0%
TTTGGAGAAGTCAACTTGGC+TGG - chr8.2:3329434-3329453 MS.gene62057:CDS 45.0%
! TGAGAATGCTCCAAGAGCAT+AGG + chr8.2:3328611-3328630 None:intergenic 45.0%
! TGGAGCATTCTCATTCTCAG+AGG - chr8.2:3328618-3328637 MS.gene62057:CDS 45.0%
!! ATAATCTGGGGGCGTCAATA+AGG - chr8.2:3331237-3331256 MS.gene62057:intron 45.0%
!! CAGCTATTTTACGTGTGACC+AGG + chr8.2:3331314-3331333 None:intergenic 45.0%
!! GAAGGTGCTTACTTGAGTGA+TGG - chr8.2:3328790-3328809 MS.gene62057:CDS 45.0%
!!! GCTACCGGTTTTCAATTTCG+TGG - chr8.2:3329277-3329296 MS.gene62057:intron 45.0%
ACACCTCTTGTTCGTCTCAC+AGG + chr8.2:3329530-3329549 None:intergenic 50.0%
CAACTGCAGCTGCATGTGAT+AGG + chr8.2:3329979-3329998 None:intergenic 50.0%
CAAGGAACCTCCACAACAGA+GGG - chr8.2:3330782-3330801 MS.gene62057:intron 50.0%
CCAGTTGCTCACTGTGATTG+GGG + chr8.2:3329671-3329690 None:intergenic 50.0%
CGGCAAGTACCCAAAAGAGA+TGG - chr8.2:3330619-3330638 MS.gene62057:intron 50.0%
CTCGTATCCGTGTCATGTTC+TGG + chr8.2:3331549-3331568 None:intergenic 50.0%
GCATTGTCGTACACGTTGAC+TGG - chr8.2:3330225-3330244 MS.gene62057:CDS 50.0%
GGGTACTTGCCGAAGAAGAT+TGG + chr8.2:3330611-3330630 None:intergenic 50.0%
TAGCGAGGGAGATTCAGAGA+AGG - chr8.2:3329925-3329944 MS.gene62057:CDS 50.0%
TCAATGTGTGAGTCTGGGCA+AGG - chr8.2:3330764-3330783 MS.gene62057:intron 50.0%
TTCGTCTCACAGGCAGTAGA+TGG + chr8.2:3329520-3329539 None:intergenic 50.0%
!! AAGATTGGGTTGGACGTGCA+AGG + chr8.2:3330912-3330931 None:intergenic 50.0%
AATTTGCGGGAGCAGCGACA+TGG + chr8.2:3329896-3329915 None:intergenic 55.0%
AGGGAAGGAGCAGATGTGAG+AGG - chr8.2:3331360-3331379 MS.gene62057:CDS 55.0%
CACTGCTTCTTCTGCCTACC+AGG - chr8.2:3328681-3328700 MS.gene62057:CDS 55.0%
CCCCAATCACAGTGAGCAAC+TGG - chr8.2:3329668-3329687 MS.gene62057:intron 55.0%
CTGCCTGTGAGACGAACAAG+AGG - chr8.2:3329524-3329543 MS.gene62057:CDS 55.0%
GCAAGGAACCTCCACAACAG+AGG - chr8.2:3330781-3330800 MS.gene62057:intron 55.0%
GCTGAGCAGGGAGGACAAAT+TGG - chr8.2:3330203-3330222 MS.gene62057:CDS 55.0%
GCTTAGAACCGTAGGCTCAG+AGG - chr8.2:3331599-3331618 MS.gene62057:CDS 55.0%
GGTAGAAGTCGAACGAGCCA+TGG + chr8.2:3330347-3330366 None:intergenic 55.0%
TGTCGCTGCTCCCGCAAATT+TGG - chr8.2:3329896-3329915 MS.gene62057:CDS 55.0%
TTTGTCCTCCCTGCTCAGCC+TGG + chr8.2:3330202-3330221 None:intergenic 60.0%
ACGCTGCATCCAGGCTGAGC+AGG - chr8.2:3330190-3330209 MS.gene62057:CDS 65.0%
CGCTGCATCCAGGCTGAGCA+GGG - chr8.2:3330191-3330210 MS.gene62057:CDS 65.0%
TGCATCCAGGCTGAGCAGGG+AGG - chr8.2:3330194-3330213 MS.gene62057:CDS 65.0%
TGCGGGAGCAGCGACATGGT+GGG + chr8.2:3329892-3329911 None:intergenic 65.0%
TTGCGGGAGCAGCGACATGG+TGG + chr8.2:3329893-3329912 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 3328574 3331621 3328574 ID=MS.gene62057
chr8.2 mRNA 3328574 3331621 3328574 ID=MS.gene62057.t1;Parent=MS.gene62057
chr8.2 exon 3331493 3331621 3331493 ID=MS.gene62057.t1.exon1;Parent=MS.gene62057.t1
chr8.2 CDS 3331493 3331621 3331493 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3331342 3331408 3331342 ID=MS.gene62057.t1.exon2;Parent=MS.gene62057.t1
chr8.2 CDS 3331342 3331408 3331342 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3331169 3331227 3331169 ID=MS.gene62057.t1.exon3;Parent=MS.gene62057.t1
chr8.2 CDS 3331169 3331227 3331169 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3330880 3330955 3330880 ID=MS.gene62057.t1.exon4;Parent=MS.gene62057.t1
chr8.2 CDS 3330880 3330955 3330880 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3330695 3330769 3330695 ID=MS.gene62057.t1.exon5;Parent=MS.gene62057.t1
chr8.2 CDS 3330695 3330769 3330695 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3330517 3330604 3330517 ID=MS.gene62057.t1.exon6;Parent=MS.gene62057.t1
chr8.2 CDS 3330517 3330604 3330517 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3330174 3330426 3330174 ID=MS.gene62057.t1.exon7;Parent=MS.gene62057.t1
chr8.2 CDS 3330174 3330426 3330174 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3329877 3329992 3329877 ID=MS.gene62057.t1.exon8;Parent=MS.gene62057.t1
chr8.2 CDS 3329877 3329992 3329877 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3329342 3329597 3329342 ID=MS.gene62057.t1.exon9;Parent=MS.gene62057.t1
chr8.2 CDS 3329342 3329597 3329342 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3329139 3329199 3329139 ID=MS.gene62057.t1.exon10;Parent=MS.gene62057.t1
chr8.2 CDS 3329139 3329199 3329139 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3328937 3329045 3328937 ID=MS.gene62057.t1.exon11;Parent=MS.gene62057.t1
chr8.2 CDS 3328937 3329045 3328937 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
chr8.2 exon 3328574 3328833 3328574 ID=MS.gene62057.t1.exon12;Parent=MS.gene62057.t1
chr8.2 CDS 3328574 3328833 3328574 ID=cds.MS.gene62057.t1;Parent=MS.gene62057.t1
Gene Sequence

>MS.gene62057

ATGGAGATACAACTACTCTTTTTCTTATTCACTACCTATGCTCTTGGAGCATTCTCATTCTCAGAGGAGTTTGATCATTATCCTTTTCCATCCAACTTTCTCTTTGGCACTGCTTCTTCTGCCTACCAGGTTTCTTTACCTTCTTCATGTTTATCTCCTAAAATCTTCATTATTTTAATTAATCATGGCTGATTATTAAACTTAATATTATAGTATGAAGGTGCTTACTTGAGTGATGGCAAAGGATTGAGTGACTGGGATGTCTTCACTCATAAACCAGGTCATGATAACAACATTTCTATGTCATCTAGACATCCATTTTTCATACTTGAATACCTTCATTCATTCAATCACCTGAGTTGCGTAATTACATAATAACATATATTTTTTTCAGGTAGTACTGATGATGGAAGTAACGGTGATGTTACTGTTGATCAATATCATCGGTATCTGGTACACATCATAATACTATTTTTTGGTGAATCATCACAATACTTTTAAGTTCCTCATAATCAAAATCCAATTTAGTTTAAGAGGTTACAACCTTAACAAGTGTTGTGTCAATACTAGAATTTTAGACTTGTCGAGAAAGTATGTGTACCTTATCTACTTTAACTAATTACACCCATTATATATGGTCTAAATGTCAATTTGTAATAAAAACAGGAGGATGTAGATTTAATGGAAGCTATCAAAGTCAACAGCTACCGGTTTTCAATTTCGTGGGCAAGAATTCTACCAAGTACGCATCTTGATTTAACATAATCTCAGTGATTTCAACTAATTAGCAAATATTAAGTACCTGTGTGTTCTAGTCAATTCACAAGCAGAATTTGCAATGACTGTGAGCAGAAGGTAGATTTGGAGAAGTCAACTTGGCTGGTATTGACTACTATAATAGGCTTATCGACGCTTTGCTACTCAAAGGTTTGGTTTCAATCTTCCATCTACTGCCTGTGAGACGAACAAGAGGTGTCACTGTTCGATTAGCTTAACCTGCAAGTATACAATTCGCAGGGATCCAACCGTTTGTTACATTGTTTCACTTTGATTTCCCTCAAGAACTTGACGACAGATATGGAGGTTGGCTAAGTCCCCAATCACAGTGAGCAACTGGTTCTACAATTCAATTTGCTCATACTTCACTTCCTTTGTCATACTTTACCAGCATTATAATGTATTTTGACATGTACAGGGAAGATTTTGTATTATTCGCAGACATATGTTTTAAATCCTTTGGTGACAGAGTTAAGTACTGGACCACATTCAATGAACCAAATCTCCAAGTTTCACTTGGTTACCGAAATGGTAAACACCCACCATGTCGCTGCTCCCGCAAATTTGGAAATTGTAGCGAGGGAGATTCAGAGAAGGACCCCTTTGTAGCAGCCCATAATATTATCCTATCACATGCAGCTGCAGTTGATATTTATAGAAACAAATACCAGGTAATATAGTAAAAAGACCTCACAACTTTGTAGCAGCATGCTAAGGAATCAAATTATTTCTATTTAAGCTAATAAAAAAATAATTATGATGCTAGTTTTACAAATCAAAGTGAAAAGTAAGTATGATTGAACTCTCATTCGAAACATTGTAAACATGATTTACTTTTAACGCTGCATCCAGGCTGAGCAGGGAGGACAAATTGGCATTGTCGTACACGTTGACTGGTTTGAACCGTTTAGCAATTCGGTAGCTGATAAATTAGCTGCTGAAAGAGCTCAATCATTCAGCATGAACTGGTAGGATTTCCTCATTGTTCAATGTCCATGGCTCGTTCGACTTCTACCATGCAAAAGTTTGATTTGGATTTGTTCTACTCACATAGTCACATTTGCAACTGCCAGATCAAGATTGAACAGCTCACTTTTGACTTCATATTTTGGCCTGATTTACTAAAGTCAGAGTATGAGACTGAAATCTTGATCAAATGGTTCAAATCATGTGATTGGACTCAATGCATGATTCTCTAACCGTAGACAATCCACCTGATCATGAAGTTTGACTCTATAATAATGCAGGATCTTGGATCCAATCTTCTTCGGCAAGTACCCAAAAGAGATGGAGGTGATTTTAGGAAGTACATTACCCAAATTTTCCAGTAACGACAAAGCAAAACTGAATCGAGGACTCGATTTCATTGGCATCAATCATTATGCAGGTTACTATGCTAGAGACTGCATATCATCAATGTGTGAGTCTGGGCAAGGAACCTCCACAACAGAGGGTTTATACCAACAAACTGCACAAAAAGATGGTGTCCCCATTGGAGAGCTTGTAAGCACTTCATCCTTTTGATGATTCCATTAGTTACATTTTTATTTATCGTTAACCTTGCACGTCCAACCCAATCTTGAAAGTTGTATTGTTATGTGTAGACTCCATTTGATTGGCTCAATGTTTACCACAAGGCATGAAGAAAACTGTTACCTATGTGAAGGACAGGTACAATAACACTCCAATGTTCATTACTGAGAATGGTAAGTAAAGAAACACATTGAAGTTGAACCATTTTCATTGAATTTCAACCATTATTAGTCTCTTACACAGACTCTATCCGAATGTTTTTGTAGGGTATGGCAATTTGTATGATCCAAATAACACCAAGGAAGAATGTCTTAATGATATTAAAAGAATAAACTACATGACTGGTCACTTAGATAATCTGGGGGCGTCAATAAGGTAAGAGTCCACAAAAACCGAATAAACATCAAAGTTATCGATATATGGTTTACCTGGTCACACGTAAAATAGCTGAGTATTTGTGTTGGTTATGTGGCTATAGGGAAGGAGCAGATGTGAGAGGATACTTTGCCTGGTCCTTGCTTGACAACTTTGAGTGGCTATTTGGTTTTACAGTGAAATTTGGACTTTACCATGTTGATTTTGCTACGCAGAAGAGAACTCCAAAATTGTCAGCTAGTTGGTACAAACATTTCATTGCAAAACATAAAACCGAAAGCAGTAATCCAGAACATGACACGGATACGAGAAACTGGAACAAACAATTCAAGGCAAATATGCTTAGAACCGTAGGCTCAGAGG
Protein sequence

>MS.gene62057.t1

MEIQLLFFLFTTYALGAFSFSEEFDHYPFPSNFLFGTASSAYQYEGAYLSDGKGLSDWDVFTHKPGSTDDGSNGDVTVDQYHRYLEDVDLMEAIKVNSYRFSISWARILPKGRFGEVNLAGIDYYNRLIDALLLKGIQPFVTLFHFDFPQELDDRYGGWLSPQSQEDFVLFADICFKSFGDRVKYWTTFNEPNLQVSLGYRNGKHPPCRCSRKFGNCSEGDSEKDPFVAAHNIILSHAAAVDIYRNKYQAEQGGQIGIVVHVDWFEPFSNSVADKLAAERAQSFSMNWILDPIFFGKYPKEMEVILGSTLPKFSSNDKAKLNRGLDFIGINHYAGYYARDCISSMCESGQGTSTTEGLYQQTAQKDGVPIGELKTVTYVKDRYNNTPMFITENGYGNLYDPNNTKEECLNDIKRINYMTGHLDNLGASIREGADVRGYFAWSLLDNFEWLFGFTVKFGLYHVDFATQKRTPKLSASWYKHFIAKHKTESSNPEHDTDTRNWNKQFKANMLRTVGSE