AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012613

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012613.t1 MTR_4g131810 95.010 521 26 0 1 521 1 521 0.0 1018
MS.gene012613.t1 MTR_4g131800 69.583 503 141 4 14 507 493 992 0.0 733
MS.gene012613.t1 MTR_2g022760 66.019 515 161 3 8 511 6 517 0.0 709
MS.gene012613.t1 MTR_2g022710 64.301 479 168 2 30 508 37 512 0.0 663
MS.gene012613.t1 MTR_2g022760 68.750 416 128 1 96 511 1 414 0.0 613
MS.gene012613.t1 MTR_2g022710 63.744 422 150 2 30 451 37 455 0.0 573
MS.gene012613.t1 MTR_2g022710 63.962 419 148 2 33 451 40 455 0.0 572
MS.gene012613.t1 MTR_2g022710 63.196 413 150 1 96 508 1 411 0.0 565
MS.gene012613.t1 MTR_2g022710 65.803 386 129 2 30 415 37 419 0.0 541
MS.gene012613.t1 MTR_2g079580 52.431 473 221 3 33 505 37 505 0.0 535
MS.gene012613.t1 MTR_2g079550 52.008 473 223 3 33 505 35 503 0.0 528
MS.gene012613.t1 MTR_2g022710 64.973 374 128 2 30 403 37 407 0.0 517
MS.gene012613.t1 MTR_2g022710 65.429 350 118 2 30 379 37 383 8.30e-169 484
MS.gene012613.t1 MTR_6g078330 46.525 518 263 6 1 507 1 515 1.39e-166 482
MS.gene012613.t1 MTR_6g078450 47.347 490 252 5 16 503 25 510 2.09e-164 476
MS.gene012613.t1 MTR_2g098540 46.931 505 253 5 14 506 7 508 2.14e-164 476
MS.gene012613.t1 MTR_2g098790 44.910 501 271 4 5 503 15 512 2.14e-162 471
MS.gene012613.t1 MTR_4g066210 48.542 480 242 5 33 510 48 524 2.87e-162 471
MS.gene012613.t1 MTR_2g098520 45.697 488 260 4 21 506 27 511 3.03e-162 471
MS.gene012613.t1 MTR_6g078380 48.367 490 248 5 16 503 25 511 1.40e-161 469
MS.gene012613.t1 MTR_4g066240 47.505 501 258 5 5 503 13 510 1.58e-161 469
MS.gene012613.t1 MTR_4g083000 45.957 507 264 6 1 503 1 501 2.34e-160 466
MS.gene012613.t1 MTR_4g066630 47.590 498 243 6 15 504 27 514 3.65e-160 466
MS.gene012613.t1 MTR_4g066240 47.410 502 258 6 5 503 13 511 1.06e-159 464
MS.gene012613.t1 MTR_4g081530 48.414 473 239 5 33 503 29 498 3.99e-156 455
MS.gene012613.t1 MTR_0110s0040 47.059 476 242 6 33 507 48 514 7.57e-156 454
MS.gene012613.t1 MTR_4g066580 46.465 495 246 6 33 519 44 527 1.68e-155 454
MS.gene012613.t1 MTR_0110s0030 47.479 476 240 6 33 507 48 514 2.42e-155 453
MS.gene012613.t1 MTR_4g066590 47.193 481 237 5 33 505 38 509 4.08e-155 452
MS.gene012613.t1 MTR_2g098540 46.753 462 241 4 47 506 6 464 2.34e-154 449
MS.gene012613.t1 MTR_3g026280 45.436 493 258 6 14 503 7 491 2.35e-154 450
MS.gene012613.t1 MTR_3g028720 43.643 527 278 7 1 518 10 526 2.06e-153 449
MS.gene012613.t1 MTR_4g023000 44.869 497 262 6 10 503 5 492 5.98e-153 446
MS.gene012613.t1 MTR_3g026400 45.493 477 253 4 33 508 42 512 1.05e-151 444
MS.gene012613.t1 MTR_4g066330 43.774 514 250 5 2 503 5 491 8.49e-151 441
MS.gene012613.t1 MTR_5g071520 45.437 504 245 7 21 503 28 522 1.16e-150 441
MS.gene012613.t1 MTR_2g079580 53.003 383 176 3 33 415 37 415 1.44e-150 437
MS.gene012613.t1 MTR_3g026620 46.960 477 246 4 33 508 43 513 2.17e-149 438
MS.gene012613.t1 MTR_5g044000 43.545 519 266 7 9 503 5 520 1.32e-148 436
MS.gene012613.t1 MTR_4g066280 44.748 476 234 4 33 506 46 494 5.21e-148 434
MS.gene012613.t1 MTR_4g066640 45.781 474 248 5 33 503 44 511 7.07e-148 434
MS.gene012613.t1 MTR_3g026400 45.217 460 245 4 45 503 23 476 1.82e-145 427
MS.gene012613.t1 MTR_4g066340 46.420 433 227 4 73 503 8 437 3.37e-145 424
MS.gene012613.t1 MTR_3g033810 45.603 489 233 7 33 510 26 492 5.98e-145 426
MS.gene012613.t1 MTR_3g033790 44.444 477 242 6 33 505 24 481 2.09e-141 417
MS.gene012613.t1 MTR_6g078450 46.453 437 229 4 16 451 25 457 7.62e-140 411
MS.gene012613.t1 MTR_6g078330 47.826 414 211 4 96 507 1 411 4.64e-138 405
MS.gene012613.t1 MTR_4g066630 46.501 443 220 5 15 450 27 459 9.21e-137 404
MS.gene012613.t1 MTR_2g043200 44.235 477 231 7 33 503 70 517 1.25e-135 403
MS.gene012613.t1 MTR_4g015420 43.182 484 232 9 33 503 70 523 2.40e-134 400
MS.gene012613.t1 MTR_4g016920 41.895 475 259 7 33 505 32 491 2.37e-131 392
MS.gene012613.t1 MTR_3g028720 42.919 459 245 5 1 451 10 459 7.61e-130 386
MS.gene012613.t1 MTR_7g068910 39.388 490 279 7 17 503 19 493 1.44e-129 387
MS.gene012613.t1 MTR_4g015460 42.116 482 239 9 33 503 47 499 2.71e-129 386
MS.gene012613.t1 MTR_4g083000 45.631 412 215 5 96 503 1 407 1.52e-128 381
MS.gene012613.t1 MTR_6g078330 47.015 402 206 5 108 507 15 411 4.00e-128 380
MS.gene012613.t1 MTR_4g066630 47.059 408 199 5 15 415 27 424 1.37e-127 380
MS.gene012613.t1 MTR_4g066240 46.602 412 216 4 5 415 13 421 4.27e-127 378
MS.gene012613.t1 MTR_7g068910 38.600 500 279 8 17 503 19 503 3.10e-126 379
MS.gene012613.t1 MTR_4g066580 47.179 390 190 4 33 415 44 424 3.49e-124 370
MS.gene012613.t1 MTR_1g088610 39.959 483 263 9 33 509 32 493 1.45e-122 373
MS.gene012613.t1 MTR_1g088610 35.156 128 75 3 390 515 503 624 1.43e-17 86.3
MS.gene012613.t1 MTR_5g068740 38.742 493 268 8 33 515 32 500 2.05e-122 369
MS.gene012613.t1 MTR_3g028720 43.735 423 221 5 1 415 10 423 3.02e-122 365
MS.gene012613.t1 MTR_7g033860 38.462 494 264 8 24 503 44 511 5.96e-119 360
MS.gene012613.t1 MTR_4g066630 50.149 335 164 3 15 348 27 359 1.16e-116 349
MS.gene012613.t1 MTR_6g078330 48.045 358 175 4 1 348 1 357 1.62e-116 349
MS.gene012613.t1 MTR_4g067040 46.296 378 187 4 33 403 39 407 3.15e-116 349
MS.gene012613.t1 MTR_0108s0030 38.144 485 253 10 33 508 8 454 2.36e-114 346
MS.gene012613.t1 MTR_0110s0040 49.841 315 154 3 33 347 48 358 5.03e-113 341
MS.gene012613.t1 MTR_4g067040 50.473 317 155 2 33 348 39 354 2.70e-112 338
MS.gene012613.t1 MTR_3g026400 50.000 314 154 2 33 346 42 352 4.78e-111 335
MS.gene012613.t1 MTR_3g028720 44.301 386 198 5 1 378 10 386 1.82e-110 334
MS.gene012613.t1 MTR_4g066640 49.367 316 154 3 33 346 44 355 1.97e-108 328
MS.gene012613.t1 MTR_1g088630 36.864 472 253 9 47 515 14 443 3.21e-106 325
MS.gene012613.t1 MTR_7g068900 39.952 418 230 8 91 503 17 418 3.95e-106 326
MS.gene012613.t1 MTR_4g016920 40.049 412 231 6 96 505 1 398 6.82e-105 321
MS.gene012613.t1 MTR_7g051510 37.526 485 258 8 33 504 80 532 6.12e-104 322
MS.gene012613.t1 MTR_7g051610 36.831 486 262 8 33 505 80 533 1.12e-102 319
MS.gene012613.t1 MTR_7g051650 36.458 480 267 9 33 504 80 529 3.71e-96 301
MS.gene012613.t1 MTR_7g051650 36.117 479 274 8 33 504 80 533 4.05e-96 302
MS.gene012613.t1 MTR_1g088630 41.905 315 155 4 33 347 32 318 2.13e-86 271
MS.gene012613.t1 MTR_7g056747 36.277 419 236 7 90 505 9 399 2.79e-82 261
MS.gene012613.t1 MTR_1g088630 44.788 259 139 2 33 291 32 286 1.11e-78 249
MS.gene012613.t1 MTR_0110s0020 51.770 226 105 3 33 258 48 269 2.52e-77 246
MS.gene012613.t1 MTR_4g016920 44.048 252 139 2 96 347 1 250 4.02e-75 240
MS.gene012613.t1 MTR_4g122980 25.176 425 242 13 92 509 183 538 5.09e-26 112
MS.gene012613.t1 MTR_8g038650 38.614 101 61 1 247 347 51 150 4.42e-19 84.7
MS.gene012613.t1 MTR_8g038650 48.214 56 28 1 35 90 5 59 4.21e-11 62.0
MS.gene012613.t1 MTR_2g022730 46.914 81 41 1 381 459 24 104 5.89e-19 85.9
MS.gene012613.t1 MTR_5g069350 32.474 194 75 7 336 503 24 187 1.13e-16 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012613.t1 AT1G61820 57.738 504 206 3 5 503 3 504 0.0 619
MS.gene012613.t1 AT4G21760 58.105 475 191 3 33 507 59 525 0.0 602
MS.gene012613.t1 AT1G61810 57.113 478 202 2 30 506 35 510 0.0 591
MS.gene012613.t1 AT4G21760 57.263 475 185 4 33 507 59 515 0.0 584
MS.gene012613.t1 AT1G61810 57.235 463 195 2 30 491 35 495 0.0 573
MS.gene012613.t1 AT1G61810 56.968 409 173 2 99 506 4 410 2.23e-177 506
MS.gene012613.t1 AT1G61810 57.033 391 165 2 30 419 35 423 2.25e-166 478
MS.gene012613.t1 AT1G61820 57.493 367 153 2 138 503 1 365 2.41e-160 461
MS.gene012613.t1 AT1G26560 46.429 476 244 7 33 503 37 506 1.57e-155 453
MS.gene012613.t1 AT5G54570 47.357 473 245 4 33 503 35 505 3.06e-155 454
MS.gene012613.t1 AT3G18080 46.512 473 242 7 33 503 44 507 1.49e-154 451
MS.gene012613.t1 AT2G44480 45.684 475 252 4 33 505 40 510 4.46e-150 440
MS.gene012613.t1 AT2G44480 45.684 475 252 4 33 505 71 541 9.38e-150 440
MS.gene012613.t1 AT2G44450 44.351 478 256 5 33 508 36 505 6.42e-147 431
MS.gene012613.t1 AT3G18070 42.887 485 265 8 20 503 23 496 1.12e-146 431
MS.gene012613.t1 AT3G60130 45.570 474 247 6 33 503 35 500 3.98e-146 429
MS.gene012613.t1 AT5G44640 42.802 514 272 9 9 508 1 506 6.28e-146 429
MS.gene012613.t1 AT3G18070 42.680 485 260 8 20 503 23 490 1.38e-145 427
MS.gene012613.t1 AT5G42260 43.762 505 262 9 9 499 1 497 3.56e-145 427
MS.gene012613.t1 AT5G36890 44.172 489 257 5 17 503 5 479 8.16e-142 417
MS.gene012613.t1 AT5G36890 44.172 489 257 5 17 503 5 479 9.81e-142 417
MS.gene012613.t1 AT2G25630 42.023 514 260 9 9 509 1 489 4.13e-139 410
MS.gene012613.t1 AT5G24550 43.724 478 257 9 33 503 37 509 2.01e-135 403
MS.gene012613.t1 AT3G60140 41.929 508 278 10 7 503 1 502 5.04e-135 403
MS.gene012613.t1 AT5G54570 46.539 419 222 2 33 451 35 451 1.43e-134 398
MS.gene012613.t1 AT4G27830 40.990 505 268 11 6 503 3 484 3.31e-132 394
MS.gene012613.t1 AT1G47600 43.487 476 249 8 33 504 50 509 1.11e-131 392
MS.gene012613.t1 AT1G47600 43.487 476 250 8 33 504 50 510 1.49e-131 392
MS.gene012613.t1 AT1G02850 41.649 473 256 7 33 503 31 485 3.43e-131 391
MS.gene012613.t1 AT5G24540 44.864 477 253 9 33 503 37 509 2.83e-130 390
MS.gene012613.t1 AT1G51470 42.947 475 254 7 33 504 50 510 1.22e-129 387
MS.gene012613.t1 AT5G54570 46.341 410 216 4 96 503 1 408 7.52e-129 382
MS.gene012613.t1 AT2G44480 44.903 412 221 4 96 505 1 408 3.08e-127 378
MS.gene012613.t1 AT2G44460 43.195 507 279 9 1 503 3 504 3.50e-127 383
MS.gene012613.t1 AT2G44470 40.392 510 286 9 9 504 1 506 5.27e-127 383
MS.gene012613.t1 AT1G02850 39.919 496 255 8 33 503 31 508 8.35e-127 380
MS.gene012613.t1 AT4G27820 41.387 476 253 7 33 503 28 482 1.13e-125 377
MS.gene012613.t1 AT3G60130 45.084 417 218 6 90 503 40 448 1.95e-125 375
MS.gene012613.t1 AT1G02850 40.040 497 254 9 33 503 31 509 3.43e-125 376
MS.gene012613.t1 AT2G44490 42.887 478 262 9 33 503 19 492 5.22e-125 377
MS.gene012613.t1 AT4G22100 38.953 516 292 9 7 519 1 496 8.40e-124 372
MS.gene012613.t1 AT3G62750 40.040 497 261 10 14 503 7 473 2.25e-123 371
MS.gene012613.t1 AT3G62750 40.040 497 261 10 14 503 33 499 6.87e-123 370
MS.gene012613.t1 AT3G60120 42.138 477 264 9 33 503 19 489 2.56e-122 369
MS.gene012613.t1 AT2G32860 42.017 476 268 7 33 503 99 571 2.14e-121 369
MS.gene012613.t1 AT1G02850 39.535 473 239 8 33 503 31 458 8.31e-120 360
MS.gene012613.t1 AT3G60130 44.125 417 211 7 90 503 40 437 1.74e-119 359
MS.gene012613.t1 AT2G32860 42.017 476 267 8 33 503 99 570 3.91e-119 363
MS.gene012613.t1 AT5G26000 40.115 521 279 14 1 503 6 511 5.90e-119 361
MS.gene012613.t1 AT3G21370 41.754 479 266 10 33 503 38 511 7.08e-119 360
MS.gene012613.t1 AT1G61810 59.398 266 106 1 30 295 35 298 6.01e-116 345
MS.gene012613.t1 AT5G25980 39.754 488 271 12 33 510 55 529 2.30e-113 347
MS.gene012613.t1 AT1G45191 37.259 518 296 9 5 519 6 497 2.80e-113 345
MS.gene012613.t1 AT3G62740 38.608 474 265 8 33 503 28 478 4.03e-113 345
MS.gene012613.t1 AT1G66280 40.377 478 272 8 33 504 41 511 6.62e-113 345
MS.gene012613.t1 AT5G28510 38.150 519 295 11 6 504 8 520 7.59e-113 345
MS.gene012613.t1 AT1G60090 39.331 478 259 10 33 503 29 482 1.15e-112 343
MS.gene012613.t1 AT3G09260 39.540 478 277 9 33 504 40 511 1.18e-112 344
MS.gene012613.t1 AT1G66270 40.167 478 273 8 33 504 41 511 4.35e-112 343
MS.gene012613.t1 AT1G60090 38.669 481 265 10 33 503 29 489 9.77e-111 339
MS.gene012613.t1 AT3G03640 38.557 485 285 8 33 509 39 518 1.80e-110 338
MS.gene012613.t1 AT1G45191 36.692 526 299 9 5 519 6 508 2.26e-110 338
MS.gene012613.t1 AT1G45191 36.692 526 294 10 5 519 6 503 8.97e-110 336
MS.gene012613.t1 AT1G45191 36.585 533 302 10 5 519 6 520 4.72e-109 335
MS.gene012613.t1 AT4G27830 40.338 414 223 7 96 503 1 396 6.38e-109 331
MS.gene012613.t1 AT1G66270 39.958 478 272 10 33 504 41 509 9.00e-109 334
MS.gene012613.t1 AT1G75940 38.683 486 277 9 33 505 42 519 2.76e-108 333
MS.gene012613.t1 AT1G52400 39.419 482 271 13 33 503 44 515 3.81e-108 333
MS.gene012613.t1 AT1G52400 39.419 482 271 13 33 503 44 515 3.81e-108 333
MS.gene012613.t1 AT5G24540 43.602 422 230 7 33 450 37 454 4.35e-108 330
MS.gene012613.t1 AT2G44470 39.427 454 259 7 9 450 1 450 1.45e-106 326
MS.gene012613.t1 AT3G60140 40.670 418 233 8 7 415 1 412 4.37e-104 320
MS.gene012613.t1 AT3G62750 39.101 445 236 9 14 453 33 447 1.25e-103 319
MS.gene012613.t1 AT3G18070 43.902 328 177 5 20 347 23 343 1.37e-103 316
MS.gene012613.t1 AT4G27820 40.678 413 224 6 96 503 1 397 2.36e-103 317
MS.gene012613.t1 AT4G27820 40.678 413 224 6 96 503 1 397 2.36e-103 317
MS.gene012613.t1 AT2G44450 42.265 362 200 4 148 508 1 354 1.68e-101 310
MS.gene012613.t1 AT1G02850 39.163 406 212 5 33 415 31 424 4.67e-101 311
MS.gene012613.t1 AT5G26000 40.632 443 236 11 21 451 29 456 4.88e-101 312
MS.gene012613.t1 AT2G44480 47.883 307 156 3 33 338 71 374 3.34e-98 302
MS.gene012613.t1 AT3G62750 38.983 413 222 8 96 503 1 388 3.12e-97 300
MS.gene012613.t1 AT3G62750 38.983 413 222 8 96 503 1 388 3.12e-97 300
MS.gene012613.t1 AT5G25980 39.671 426 237 10 33 451 55 467 5.14e-97 302
MS.gene012613.t1 AT5G25980 39.671 426 237 10 33 451 55 467 5.14e-97 302
MS.gene012613.t1 AT3G18070 42.638 326 180 4 179 503 100 419 6.18e-95 295
MS.gene012613.t1 AT3G62740 37.709 419 237 7 33 450 28 423 3.23e-94 293
MS.gene012613.t1 AT2G44470 43.804 347 182 5 9 344 1 345 3.62e-93 290
MS.gene012613.t1 AT3G62750 41.964 336 177 4 14 347 7 326 4.08e-91 283
MS.gene012613.t1 AT3G62750 41.964 336 177 4 14 347 7 326 4.08e-91 283
MS.gene012613.t1 AT1G52400 38.194 432 238 11 33 450 44 460 1.76e-90 285
MS.gene012613.t1 AT3G62750 41.964 336 177 4 14 347 33 352 1.09e-89 282
MS.gene012613.t1 AT3G18070 41.534 313 176 4 192 503 1 307 9.68e-89 275
MS.gene012613.t1 AT1G60270 42.581 310 171 3 33 342 29 331 3.01e-87 274
MS.gene012613.t1 AT2G44460 42.936 361 200 6 146 503 1 358 3.85e-85 270
MS.gene012613.t1 AT1G45191 39.650 343 199 3 5 347 6 340 2.95e-84 267
MS.gene012613.t1 AT1G45191 39.650 343 199 3 5 347 6 340 3.27e-84 267
MS.gene012613.t1 AT2G44480 41.118 304 174 3 203 505 5 304 7.09e-80 252
MS.gene012613.t1 AT5G48375 36.170 423 196 9 56 469 54 411 2.75e-79 255
MS.gene012613.t1 AT1G51490 41.618 346 183 10 36 378 28 357 2.35e-74 241
MS.gene012613.t1 AT1G60270 41.700 247 141 2 96 342 1 244 6.78e-66 215
MS.gene012613.t1 AT3G18070 39.241 237 141 2 179 415 100 333 4.68e-61 204
MS.gene012613.t1 AT3G18070 37.500 224 137 2 192 415 1 221 7.08e-55 184
MS.gene012613.t1 AT5G16580 36.789 299 165 6 167 461 21 299 1.50e-54 186
MS.gene012613.t1 AT3G06510 24.036 441 265 13 91 510 159 550 1.96e-24 107
MS.gene012613.t1 AT3G06510 24.766 428 244 14 91 510 159 516 3.20e-23 103

Find 130 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATTACCTACCTGGTATT+TGG 0.208346 8.1:+2144089 None:intergenic
TTCCCCACTAACTTTCTCTT+TGG 0.261729 8.1:-2147783 MS.gene012613:CDS
TATAAATCTATTGGAAGATT+TGG 0.266663 8.1:-2145075 MS.gene012613:CDS
CCAATGTTCATAACTGAAAA+TGG 0.266850 8.1:-2143194 MS.gene012613:intron
CCAAGTGATACGAGGTAATT+TGG 0.289536 8.1:+2144258 None:intergenic
CATGCGACAGGATAGTATTA+TGG 0.294710 8.1:+2144136 None:intergenic
AAGAACGTCCTCCATCTCTT+TGG 0.299983 8.1:+2143578 None:intergenic
TAGAATTCTTGCCCATGATA+TGG 0.301023 8.1:+2145031 None:intergenic
GATAACTTTGAGTGGATATA+CGG 0.314642 8.1:-2142485 MS.gene012613:CDS
TGATCTTCCAAAGTGAGATT+TGG 0.315957 8.1:+2142880 None:intergenic
CAACTCTACAGCTGACAAAT+TGG 0.324160 8.1:-2143767 MS.gene012613:CDS
TAAATGTTAAACCAGCTAAA+TGG 0.333889 8.1:+2143272 None:intergenic
AGAACGTCCTCCATCTCTTT+GGG 0.335489 8.1:+2143579 None:intergenic
AACTGGTAGCTTACTGTGAT+TGG 0.338634 8.1:+2144452 None:intergenic
GTCAATGACAACTCTGTATC+TGG 0.353001 8.1:-2147859 MS.gene012613:CDS
AAAGAGATGGAGGACGTTCT+TGG 0.353202 8.1:-2143576 MS.gene012613:CDS
TCCCCACTAACTTTCTCTTT+GGG 0.360242 8.1:-2147782 MS.gene012613:CDS
CAAGAACTAGAAGAGAGATA+TGG 0.362673 8.1:-2144490 MS.gene012613:CDS
CCAGGAGGATATAAATCTAT+TGG 0.363807 8.1:-2145084 MS.gene012613:intron
ATGGCAAGGGACAAAGTAAC+TGG 0.371646 8.1:-2147606 MS.gene012613:CDS
TTGTGAACAGAGGGTAGATT+TGG 0.372297 8.1:-2144915 MS.gene012613:intron
ATGTCGTTGCTCTGGTTCAT+TGG 0.379072 8.1:-2144211 MS.gene012613:CDS
ATCTCTCTTCTAGTTCTTGT+GGG 0.379470 8.1:+2144494 None:intergenic
ACCAAGTGTGATTCTAGATC+TGG 0.382576 8.1:-2143444 MS.gene012613:CDS
GGGTATTTACCAAATATGAT+TGG 0.393023 8.1:+2143600 None:intergenic
AGGCTTTGTCAACAGCAATA+AGG 0.409449 8.1:-2142813 MS.gene012613:intron
TATAAACAAACTGAATTCAC+TGG 0.414101 8.1:-2142365 MS.gene012613:CDS
GTAGATTTGGAGAGGTCAAT+TGG 0.416138 8.1:-2144902 MS.gene012613:CDS
AGTATTATGGGCTGCTACAA+AGG 0.417589 8.1:+2144149 None:intergenic
TAACCTGGTATCGGTGATAA+TGG 0.418345 8.1:+2147317 None:intergenic
ACTGGTAGCTTACTGTGATT+GGG 0.419068 8.1:+2144453 None:intergenic
TGAGATTTGGATCATCTTGT+TGG 0.419399 8.1:+2142893 None:intergenic
TCAGCTGTAGAGTTGCTCAT+TGG 0.429063 8.1:+2143775 None:intergenic
ACTTGGTGTATATGCAATCT+TGG 0.429128 8.1:+2143460 None:intergenic
CTGTTACATATGTGAAAGAT+AGG 0.429734 8.1:-2143229 MS.gene012613:CDS
CAAGATCATTCACCTTCAAT+TGG 0.431064 8.1:-2143732 MS.gene012613:intron
ATGCGACAGGATAGTATTAT+GGG 0.433608 8.1:+2144137 None:intergenic
TACGGATACACAGTAAGATA+TGG 0.434173 8.1:-2142467 MS.gene012613:CDS
CGTATCACTTGGATACCGTT+CGG 0.435155 8.1:-2144247 MS.gene012613:CDS
TGGAAGAAAATTCAGGTAAG+AGG 0.439680 8.1:+2143550 None:intergenic
GGTATTTACCAAATATGATT+GGG 0.443784 8.1:+2143601 None:intergenic
GACTGCTTCTTCTTCTTACC+AGG 0.448522 8.1:-2147760 MS.gene012613:intron
TATCTCTCTTCTAGTTCTTG+TGG 0.448704 8.1:+2144493 None:intergenic
AAGAACTAGAAGAGAGATAT+GGG 0.452667 8.1:-2144489 MS.gene012613:CDS
GCCACCGGCTTTCCATATCA+TGG 0.456812 8.1:-2145043 MS.gene012613:CDS
CATTTCTGTATCCACTTGTC+AGG 0.458070 8.1:+2143397 None:intergenic
GTATCACTTGGATACCGTTC+GGG 0.458260 8.1:-2144246 MS.gene012613:CDS
GAATAGTAGTTTCACATGAA+TGG 0.462104 8.1:-2143804 MS.gene012613:CDS
CCAAATTACCTCGTATCACT+TGG 0.469590 8.1:-2144258 MS.gene012613:CDS
AGAAAGTTAGTGGGGAATGG+AGG 0.471558 8.1:+2147789 None:intergenic
TTGTAGTCGATGGAAGTAAC+GGG 0.471750 8.1:-2147354 MS.gene012613:CDS
ATCTTAATTTCACAGTATGA+AGG 0.478541 8.1:-2147643 MS.gene012613:intron
TGTTACAGACTCCATTTAGC+TGG 0.481757 8.1:-2143283 MS.gene012613:intron
CAACTGCAGCTGCATGCGAC+AGG 0.484595 8.1:+2144124 None:intergenic
CTGACAAGTGGATACAGAAA+TGG 0.487937 8.1:-2143396 MS.gene012613:CDS
TACAGAAATGGTGTCTCAAT+AGG 0.488994 8.1:-2143384 MS.gene012613:CDS
AAAGAAACTCAAGAAAGGAT+TGG 0.492927 8.1:-2143520 MS.gene012613:CDS
TATCCTCCATGTCGTTGCTC+TGG 0.502854 8.1:-2144219 MS.gene012613:CDS
AGGAGAATTATACCAATTGA+AGG 0.509855 8.1:+2143720 None:intergenic
TAGATTTGGAGAGGTCAATT+GGG 0.510918 8.1:-2144901 MS.gene012613:CDS
TCCTCTCCTCTCAAATGCAG+TGG 0.514604 8.1:-2147820 MS.gene012613:CDS
AGATGATCCAAATCTCACTT+TGG 0.517428 8.1:-2142887 MS.gene012613:CDS
GACTTAGAGTAACAAAGGGT+TGG 0.518864 8.1:+2144527 None:intergenic
TTTGGAGAGGTCAATTGGGC+TGG 0.519861 8.1:-2144897 MS.gene012613:CDS
TGCTTATAATAGTGATGGCA+AGG 0.526102 8.1:-2147620 MS.gene012613:CDS
AGTCCCAAAGAGAAAGTTAG+TGG 0.528887 8.1:+2147779 None:intergenic
CCTTGCTTGATAACTTTGAG+TGG 0.529827 8.1:-2142493 MS.gene012613:CDS
TAACATTTATCCACAAGGCA+TGG 0.535615 8.1:-2143258 MS.gene012613:CDS
TACCAGCTTGCTGATAACCT+TGG 0.537330 8.1:+2142407 None:intergenic
TTGGTGATAGAGTAAAGTAC+TGG 0.544277 8.1:-2144296 MS.gene012613:CDS
AAGAGAAAGTTAGTGGGGAA+TGG 0.547568 8.1:+2147786 None:intergenic
GTATTATGGGCTGCTACAAA+GGG 0.551051 8.1:+2144150 None:intergenic
CTTGATGCCTTGCTGCTCAA+AGG 0.552274 8.1:-2144852 MS.gene012613:intron
CCAAGTGTGATTCTAGATCT+GGG 0.553787 8.1:-2143443 MS.gene012613:CDS
CATCGAAGGAGATTCTGAAA+AGG 0.553814 8.1:-2144175 MS.gene012613:CDS
GCAATCGTAACTTGCATCGA+AGG 0.560859 8.1:-2144189 MS.gene012613:CDS
ATTGTAGTCGATGGAAGTAA+CGG 0.565011 8.1:-2147355 MS.gene012613:CDS
CAGGAAAGGAGCAGATGTGA+GGG 0.566453 8.1:-2142531 MS.gene012613:CDS
GTCCCAAAGAGAAAGTTAGT+GGG 0.569571 8.1:+2147780 None:intergenic
ATAAACAAACTGAATTCACT+GGG 0.570579 8.1:-2142364 MS.gene012613:CDS
CCACCGGCTTTCCATATCAT+GGG 0.571104 8.1:-2145042 MS.gene012613:CDS
CTCCAAGGTTATCAGCAAGC+TGG 0.571960 8.1:-2142409 MS.gene012613:CDS
CCCAGATCTAGAATCACACT+TGG 0.574749 8.1:+2143443 None:intergenic
TGACCATTATCACCGATACC+AGG 0.577324 8.1:-2147320 MS.gene012613:intron
GAACGTCCTCCATCTCTTTG+GGG 0.578792 8.1:+2143580 None:intergenic
GAAGGTGCTTATAATAGTGA+TGG 0.580082 8.1:-2147625 MS.gene012613:CDS
GTTTCTAAGTAACCTGGTAT+CGG 0.580296 8.1:+2147308 None:intergenic
AACTGGGATAACTTCACTCA+CGG 0.583310 8.1:-2147589 MS.gene012613:CDS
AATGTTACCTTTGAGCAGCA+AGG 0.585146 8.1:+2144845 None:intergenic
GGTAGAGGCATTGTAGTCGA+TGG 0.586277 8.1:-2147364 MS.gene012613:CDS
TGGTAAATACCCCAAAGAGA+TGG 0.588992 8.1:-2143589 MS.gene012613:CDS
ATAGTGACTTAGAGTAACAA+AGG 0.589686 8.1:+2144522 None:intergenic
ATTTGGAAGTAAATAGCCAC+CGG 0.593203 8.1:-2145058 MS.gene012613:CDS
ATGTGAGGGGATACTTTGCA+TGG 0.598521 8.1:-2142517 MS.gene012613:CDS
GTACATGAAAAGTCACATAG+AGG 0.599280 8.1:-2142833 MS.gene012613:CDS
TCTGGGACTTCAAGAACAGA+AGG 0.602085 8.1:-2143426 MS.gene012613:CDS
TCCACTGCATTTGAGAGGAG+AGG 0.604238 8.1:+2147819 None:intergenic
TTGCCCATGATATGGAAAGC+CGG 0.605495 8.1:+2145039 None:intergenic
GAAGGTTCATACCTGACAAG+TGG 0.606164 8.1:-2143408 MS.gene012613:CDS
TAGTGACTTAGAGTAACAAA+GGG 0.612357 8.1:+2144523 None:intergenic
CCACTCAAAGTTATCAAGCA+AGG 0.614489 8.1:+2142493 None:intergenic
TGGAAGTAACGGGGATATCG+CGG 0.616422 8.1:-2147344 MS.gene012613:CDS
GAACTAGAAGAGAGATATGG+GGG 0.622562 8.1:-2144487 MS.gene012613:CDS
TCAGGAAAGGAGCAGATGTG+AGG 0.623119 8.1:-2142532 MS.gene012613:intron
AGAGATCCACTGCATTTGAG+AGG 0.627839 8.1:+2147814 None:intergenic
TGGTTTAACATTTATCCACA+AGG 0.632091 8.1:-2143263 MS.gene012613:CDS
AATGAACCAGAGCAACGACA+TGG 0.640158 8.1:+2144213 None:intergenic
CTGGTAGCTTACTGTGATTG+GGG 0.640553 8.1:+2144454 None:intergenic
AACAGAGGGTAGATTTGGAG+AGG 0.646012 8.1:-2144910 MS.gene012613:intron
GCTTATAATAGTGATGGCAA+GGG 0.655717 8.1:-2147619 MS.gene012613:CDS
TATCTATCGAACCAAATACC+AGG 0.658093 8.1:-2144100 MS.gene012613:intron
TCCCAAAGAGAAAGTTAGTG+GGG 0.660220 8.1:+2147781 None:intergenic
CTACACTGAAGAGAACTCCA+AGG 0.667544 8.1:-2142424 MS.gene012613:CDS
TAAATACCCCAAAGAGATGG+AGG 0.669431 8.1:-2143586 MS.gene012613:CDS
AACGGTATCCAAGTGATACG+AGG 0.676963 8.1:+2144250 None:intergenic
AGAACTAGAAGAGAGATATG+GGG 0.679264 8.1:-2144488 MS.gene012613:CDS
GTGTAGCATAATCCACATGG+TGG 0.679586 8.1:+2142441 None:intergenic
TGGCAAGGGACAAAGTAACT+GGG 0.682807 8.1:-2147605 MS.gene012613:CDS
CCCATGATATGGAAAGCCGG+TGG 0.683124 8.1:+2145042 None:intergenic
AAGATATGGATTCCACCATG+TGG 0.688840 8.1:-2142453 MS.gene012613:CDS
AGGAAAGGAGCAGATGTGAG+GGG 0.688970 8.1:-2142530 MS.gene012613:CDS
ATGGAGGATACACACCCGAA+CGG 0.697605 8.1:+2144232 None:intergenic
ACATATCAGGCTGAGCAGAG+AGG 0.705339 8.1:-2143835 MS.gene012613:intron
TCAGTGTAGCATAATCCACA+TGG 0.708347 8.1:+2142438 None:intergenic
AACTAGAAGAGAGATATGGG+GGG 0.715966 8.1:-2144486 MS.gene012613:CDS
GAACCAGAGCAACGACATGG+AGG 0.725745 8.1:+2144216 None:intergenic
TGTAGTCGATGGAAGTAACG+GGG 0.740623 8.1:-2147353 MS.gene012613:CDS
TGGGATAACTTCACTCACGG+AGG 0.773561 8.1:-2147586 MS.gene012613:intron
TAAACAAACTGAATTCACTG+GGG 0.777125 8.1:-2142363 MS.gene012613:CDS
AGTTGTCATTGACAACAACG+TGG 0.794219 8.1:+2147869 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATAATATAATTATA+AGG + chr8.1:2144277-2144296 None:intergenic 0.0%
!! AAAATTTAATGAATTTGAAA+TGG + chr8.1:2145022-2145041 None:intergenic 10.0%
!! TATTATTAGTTGTAATAATA+TGG - chr8.1:2145263-2145282 MS.gene012613:intron 10.0%
!! TTGAAATTACTAAAATTAAA+TGG + chr8.1:2144586-2144605 None:intergenic 10.0%
!!! AAATTCATTAAATTTTAACA+AGG - chr8.1:2145026-2145045 MS.gene012613:intron 10.0%
!!! AATTTTAATTTTTTTTCTTG+TGG - chr8.1:2143903-2143922 MS.gene012613:intron 10.0%
!!! ATTTTAATTTTTTTTCTTGT+GGG - chr8.1:2143904-2143923 MS.gene012613:intron 10.0%
!!! GATAAATCTAAATATTTTAT+AGG - chr8.1:2147294-2147313 MS.gene012613:intron 10.0%
!!! GTATACAATTATTTTTAAAA+TGG + chr8.1:2142941-2142960 None:intergenic 10.0%
!!! TATATTATATTAGTTTCTAA+AGG + chr8.1:2146519-2146538 None:intergenic 10.0%
!! AAGAGGATATAATAATTTAT+AGG + chr8.1:2144325-2144344 None:intergenic 15.0%
!! AGAGGATATAATAATTTATA+GGG + chr8.1:2144324-2144343 None:intergenic 15.0%
!! ATATACTCAAATAAAAATAC+AGG - chr8.1:2146584-2146603 MS.gene012613:intron 15.0%
!! GATAACAATATAGTTAAAAT+TGG + chr8.1:2147499-2147518 None:intergenic 15.0%
!! TATAATATAATTATAAGGAC+TGG + chr8.1:2144272-2144291 None:intergenic 15.0%
!! TCTTTAATTATGAGTTTATA+TGG + chr8.1:2145828-2145847 None:intergenic 15.0%
!! TTACAACTAATAATATTTGT+TGG + chr8.1:2145258-2145277 None:intergenic 15.0%
!!! AATTTTATCTAATCAAATGT+TGG - chr8.1:2147583-2147602 MS.gene012613:intron 15.0%
!!! ATTAACATTTTTCTAATACT+TGG - chr8.1:2147246-2147265 MS.gene012613:intron 15.0%
!!! ATTTTAATTTTTTTCTTGTG+AGG + chr8.1:2143268-2143287 None:intergenic 15.0%
!!! TATTATTTTTTTTTTGAAGG+AGG + chr8.1:2144622-2144641 None:intergenic 15.0%
!!! TATTTTTATTTGAGTATATG+AGG + chr8.1:2146583-2146602 None:intergenic 15.0%
!!! TCTCTAAATTTTTTAATAAG+AGG + chr8.1:2144342-2144361 None:intergenic 15.0%
!!! TGAAATTTAAAATGATTGAA+CGG - chr8.1:2143451-2143470 MS.gene012613:CDS 15.0%
!!! TTTTAACAAGTGTATTAAAA+TGG + chr8.1:2144381-2144400 None:intergenic 15.0%
!!! TTTTAATTTTTTTTCTTGTG+GGG - chr8.1:2143905-2143924 MS.gene012613:intron 15.0%
!!! TTTTACAAAGATTTTGATAA+TGG + chr8.1:2145227-2145246 None:intergenic 15.0%
!! AAAACAGCAAAAAAAATGTT+AGG - chr8.1:2145526-2145545 MS.gene012613:intron 20.0%
!! AACCAACAAAAAAAAAAGAA+AGG + chr8.1:2143771-2143790 None:intergenic 20.0%
!! AATAAAATTACTTTGACTGT+AGG + chr8.1:2144820-2144839 None:intergenic 20.0%
!! ACCAACAAAAAAAAAAGAAA+GGG + chr8.1:2143770-2143789 None:intergenic 20.0%
!! ATATGTATGAAAATGTATGT+TGG - chr8.1:2147213-2147232 MS.gene012613:intron 20.0%
!! CAATTTATTTACAAACTGTA+AGG - chr8.1:2144016-2144035 MS.gene012613:intron 20.0%
!! CACATGAATGAAAAAAAAAA+AGG + chr8.1:2144120-2144139 None:intergenic 20.0%
!! CATTAATCAAACTACTATTA+AGG + chr8.1:2142822-2142841 None:intergenic 20.0%
!! CTTACAGTTTGTAAATAAAT+TGG + chr8.1:2144018-2144037 None:intergenic 20.0%
!! GAGGATATAATAATTTATAG+GGG + chr8.1:2144323-2144342 None:intergenic 20.0%
!! GATATAAAACATGTATATGA+AGG - chr8.1:2147470-2147489 MS.gene012613:intron 20.0%
!! TATAAATCTATTGGAAGATT+TGG - chr8.1:2145141-2145160 MS.gene012613:intron 20.0%
!! TATTAAAAGTGAAACATATC+AGG - chr8.1:2146368-2146387 MS.gene012613:intron 20.0%
!! TCCTAAAAGTTGTATTAAAA+TGG + chr8.1:2144410-2144429 None:intergenic 20.0%
!! TTATTATTATTATTACCGTC+TGG - chr8.1:2143354-2143373 MS.gene012613:intron 20.0%
!! TTATTTGATTCTTTACTCTT+AGG - chr8.1:2143038-2143057 MS.gene012613:intron 20.0%
!!! AAAAGCATCAGAAAAATTAT+TGG + chr8.1:2146906-2146925 None:intergenic 20.0%
!!! AAATTGATAACTAACAATGT+AGG + chr8.1:2147541-2147560 None:intergenic 20.0%
!!! ACAATGTAGGTTTTTATTTA+AGG + chr8.1:2147528-2147547 None:intergenic 20.0%
!!! ACCAAACAAAAAAAAGTATA+AGG - chr8.1:2144045-2144064 MS.gene012613:intron 20.0%
!!! ACCATTTTAATACAACTTTT+AGG - chr8.1:2144406-2144425 MS.gene012613:intron 20.0%
!!! AGAAAAATTATTGGTGATAA+TGG + chr8.1:2146897-2146916 None:intergenic 20.0%
!!! CAAATAAAAATACAGGATTT+TGG - chr8.1:2146591-2146610 MS.gene012613:intron 20.0%
!!! GAATTTTCATAATTTCAATG+TGG - chr8.1:2145102-2145121 MS.gene012613:intron 20.0%
!!! GTGCTTAAATGATTTTAATT+CGG + chr8.1:2142977-2142996 None:intergenic 20.0%
!!! GTTTGTAAATAAATTGGTTT+TGG - chr8.1:2143159-2143178 MS.gene012613:intron 20.0%
!!! GTTTGTAAATAAATTGGTTT+TGG + chr8.1:2143178-2143159 None:intergenic 20.0%
!!! TAATATACACTTCTTGTTTT+TGG - chr8.1:2146143-2146162 MS.gene012613:intron 20.0%
!!! TACTCTTAGGTATTTTTTTT+TGG - chr8.1:2143051-2143070 MS.gene012613:intron 20.0%
!!! TACTTTTTTTTGTTTGGTTT+TGG + chr8.1:2144043-2144062 None:intergenic 20.0%
!!! TCCTTATACTTTTTTTTGTT+TGG + chr8.1:2144049-2144068 None:intergenic 20.0%
!!! TCTAAATATTTTATAGGGTA+TGG - chr8.1:2147300-2147319 MS.gene012613:intron 20.0%
!!! TCTTCATTGATAAGTATTTT+GGG + chr8.1:2145581-2145600 None:intergenic 20.0%
!!! TTCTTCATTGATAAGTATTT+TGG + chr8.1:2145582-2145601 None:intergenic 20.0%
!!! TTTTCAGTATACTTAATACT+TGG - chr8.1:2144902-2144921 MS.gene012613:CDS 20.0%
! AAACAAAGGATTGGATTATA+TGG + chr8.1:2144197-2144216 None:intergenic 25.0%
! ACAGAGAAATAAAAAAAGGA+AGG + chr8.1:2143739-2143758 None:intergenic 25.0%
! ATAAACAAACTGAATTCACT+GGG - chr8.1:2147852-2147871 MS.gene012613:CDS 25.0%
! ATCTTAATTTCACAGTATGA+AGG - chr8.1:2142573-2142592 MS.gene012613:intron 25.0%
! CAATAAACCATGTCAAATAT+AGG + chr8.1:2143620-2143639 None:intergenic 25.0%
! CAATTTATTTACAAACTGCA+AGG + chr8.1:2143155-2143174 None:intergenic 25.0%
! CAGAGAAATAAAAAAAGGAA+GGG + chr8.1:2143738-2143757 None:intergenic 25.0%
! CATATGGTACAATAAGTAAT+CGG + chr8.1:2142776-2142795 None:intergenic 25.0%
! CTTGCAGTTTGTAAATAAAT+TGG - chr8.1:2143153-2143172 MS.gene012613:intron 25.0%
! GAAAAAAAGAAACTCAAGAA+AGG - chr8.1:2146691-2146710 MS.gene012613:intron 25.0%
! GAAGACAGAGAAATAAAAAA+AGG + chr8.1:2143743-2143762 None:intergenic 25.0%
! GTGAATTGTGATATTAGATA+TGG + chr8.1:2145463-2145482 None:intergenic 25.0%
! GTTTAAAAGAGATTGTTGTA+AGG + chr8.1:2147094-2147113 None:intergenic 25.0%
! TAAATGTTAAACCAGCTAAA+TGG + chr8.1:2146947-2146966 None:intergenic 25.0%
! TATAAACAAACTGAATTCAC+TGG - chr8.1:2147851-2147870 MS.gene012613:CDS 25.0%
! TATAATTATAAGGACTGGAT+AGG + chr8.1:2144267-2144286 None:intergenic 25.0%
! TGAAGAATTCATCTTAAATG+AGG - chr8.1:2145595-2145614 MS.gene012613:intron 25.0%
! TTTAACATTGAACTAACAGA+AGG - chr8.1:2143985-2144004 MS.gene012613:intron 25.0%
! TTTAACATTGAACTAACAGA+AGG + chr8.1:2144004-2143985 None:intergenic 25.0%
! TTTGAAGATATGTATATACC+TGG + chr8.1:2142477-2142496 None:intergenic 25.0%
!! AAAGTACTAATGAGACAAAT+CGG - chr8.1:2144232-2144251 MS.gene012613:CDS 25.0%
!! AAGAAAGGATTGGATTTTAT+TGG - chr8.1:2146706-2146725 MS.gene012613:intron 25.0%
!! ACCAAACAAAAAAAAGTGTA+AGG + chr8.1:2143126-2143145 None:intergenic 25.0%
!! AGTTATCAATTTTGTTACTC+TGG - chr8.1:2147549-2147568 MS.gene012613:intron 25.0%
!! GAAATACATTTTCCAAATAG+TGG + chr8.1:2147149-2147168 None:intergenic 25.0%
!! TATAATCCAATCCTTTGTTT+AGG - chr8.1:2144197-2144216 MS.gene012613:CDS 25.0%
!! TCTTTTAAACGCTCTTTTTA+TGG - chr8.1:2147104-2147123 MS.gene012613:intron 25.0%
!! TTTTCATTGGAAGAAAATTC+AGG + chr8.1:2146676-2146695 None:intergenic 25.0%
!!! ACAAAGATTTTGATAATGGA+AGG + chr8.1:2145223-2145242 None:intergenic 25.0%
!!! CACCAAATGTTTTAAAACAT+AGG + chr8.1:2145906-2145925 None:intergenic 25.0%
!!! CTTGAGTTTCTTTTTTTCAT+TGG + chr8.1:2146689-2146708 None:intergenic 25.0%
!!! GACCTATGTTTTAAAACATT+TGG - chr8.1:2145901-2145920 MS.gene012613:intron 25.0%
!!! TCCCTTTCTTTTTTTTTTGT+TGG - chr8.1:2143766-2143785 MS.gene012613:CDS 25.0%
!!! TCCTTACACTTTTTTTTGTT+TGG - chr8.1:2143122-2143141 MS.gene012613:intron 25.0%
AAAAAGGAAGGGAAAATCAA+TGG + chr8.1:2143727-2143746 None:intergenic 30.0%
AAAATTACTTTGACTGTAGG+TGG + chr8.1:2144817-2144836 None:intergenic 30.0%
AAAGAAACTCAAGAAAGGAT+TGG - chr8.1:2146696-2146715 MS.gene012613:intron 30.0%
AAATTACTTTGACTGTAGGT+GGG + chr8.1:2144816-2144835 None:intergenic 30.0%
AACAAAAGTTGGGTAAACAT+GGG - chr8.1:2143490-2143509 MS.gene012613:CDS 30.0%
AAGAACTAGAAGAGAGATAT+GGG - chr8.1:2145727-2145746 MS.gene012613:intron 30.0%
AATGCAAAAGACCAAAATTG+TGG + chr8.1:2145052-2145071 None:intergenic 30.0%
ACAGTAACAGAACAAAAGTT+GGG - chr8.1:2143480-2143499 MS.gene012613:CDS 30.0%
ACTTCAAATTGAATGTGTGT+CGG - chr8.1:2146190-2146209 MS.gene012613:intron 30.0%
AGGAGAATTATACCAATTGA+AGG + chr8.1:2146499-2146518 None:intergenic 30.0%
AGTATTTGCTTCCTAAACAA+AGG + chr8.1:2144211-2144230 None:intergenic 30.0%
ATAGTGACTTAGAGTAACAA+AGG + chr8.1:2145697-2145716 None:intergenic 30.0%
ATGTCAAAGCAAACAATTAC+AGG + chr8.1:2147613-2147632 None:intergenic 30.0%
ATTGTAGTATTGCTCAACAT+TGG - chr8.1:2145643-2145662 MS.gene012613:intron 30.0%
ATTGTTGTAAGGAATGTTAG+TGG + chr8.1:2147083-2147102 None:intergenic 30.0%
CAATAGATTTATATCCTCCT+GGG + chr8.1:2145134-2145153 None:intergenic 30.0%
CACAACATAAAATAATGCGA+TGG - chr8.1:2144703-2144722 MS.gene012613:intron 30.0%
CCAATGTTCATAACTGAAAA+TGG - chr8.1:2147022-2147041 MS.gene012613:intron 30.0%
CCACACTATAATAAGTTTGA+AGG + chr8.1:2146873-2146892 None:intergenic 30.0%
CCTTCAAACTTATTATAGTG+TGG - chr8.1:2146870-2146889 MS.gene012613:intron 30.0%
CTGTTACATATGTGAAAGAT+AGG - chr8.1:2146987-2147006 MS.gene012613:intron 30.0%
GAATAGTAGTTTCACATGAA+TGG - chr8.1:2146412-2146431 MS.gene012613:intron 30.0%
GATAACTTTGAGTGGATATA+CGG - chr8.1:2147731-2147750 MS.gene012613:intron 30.0%
TAAACAAACTGAATTCACTG+GGG - chr8.1:2147853-2147872 MS.gene012613:CDS 30.0%
TACAGTAACAGAACAAAAGT+TGG - chr8.1:2143479-2143498 MS.gene012613:CDS 30.0%
TAGTGACTTAGAGTAACAAA+GGG + chr8.1:2145696-2145715 None:intergenic 30.0%
TATATTACCTACCTGGTATT+TGG + chr8.1:2146130-2146149 None:intergenic 30.0%
TCGCTATGTTATAGAAATCT+AGG + chr8.1:2145407-2145426 None:intergenic 30.0%
TCTGTTCACAATCATATACA+AGG + chr8.1:2145292-2145311 None:intergenic 30.0%
TGGTTTAACATTTATCCACA+AGG - chr8.1:2146953-2146972 MS.gene012613:intron 30.0%
TGTATATGATTGTGAACAGA+GGG - chr8.1:2145292-2145311 MS.gene012613:intron 30.0%
TTAAATTCGAGCAAAGCATA+TGG + chr8.1:2142792-2142811 None:intergenic 30.0%
TTCAGGTCAATTTGAAAAAC+TGG + chr8.1:2145784-2145803 None:intergenic 30.0%
TTGTATATGATTGTGAACAG+AGG - chr8.1:2145291-2145310 MS.gene012613:intron 30.0%
! AAGAACATACAAGTTGACAT+TGG + chr8.1:2146278-2146297 None:intergenic 30.0%
! ATTGATTCACTCGAAGTATA+AGG - chr8.1:2146550-2146569 MS.gene012613:intron 30.0%
! ATTTTGGACCCAATCATATT+TGG - chr8.1:2146607-2146626 MS.gene012613:intron 30.0%
! CAAAAAGTGATGAAAGTGTA+GGG + chr8.1:2143095-2143114 None:intergenic 30.0%
! CCATTTTCAGTTATGAACAT+TGG + chr8.1:2147025-2147044 None:intergenic 30.0%
! GGAAGATTTTGCATTTTATG+CGG - chr8.1:2145879-2145898 MS.gene012613:intron 30.0%
! TGGTCTTTTGCATTTGAATT+TGG - chr8.1:2145058-2145077 MS.gene012613:CDS 30.0%
! TGGTTTTCTTTTTCTTGATC+AGG - chr8.1:2145663-2145682 MS.gene012613:intron 30.0%
! TTTTAACAAGGCCACAATTT+TGG - chr8.1:2145038-2145057 MS.gene012613:CDS 30.0%
!! ATTATTTTATGTTGTGCACG+CGG + chr8.1:2144699-2144718 None:intergenic 30.0%
!!! ATGGAATGTGTTGTTTTAGT+TGG + chr8.1:2145003-2145022 None:intergenic 30.0%
!!! CTACACTTTCATCACTTTTT+GGG - chr8.1:2143094-2143113 MS.gene012613:intron 30.0%
AAGAAAGACACGTGATTGAA+AGG + chr8.1:2143808-2143827 None:intergenic 35.0%
AATAAAGCTTTCTTCCGTAG+AGG - chr8.1:2143395-2143414 MS.gene012613:CDS 35.0%
AATAATATTCCCTCATGTGG+AGG - chr8.1:2145493-2145512 MS.gene012613:intron 35.0%
AGAAAGACACGTGATTGAAA+GGG + chr8.1:2143807-2143826 None:intergenic 35.0%
AGAACTAGAAGAGAGATATG+GGG - chr8.1:2145728-2145747 MS.gene012613:intron 35.0%
AGATGATCCAAATCTCACTT+TGG - chr8.1:2147329-2147348 MS.gene012613:CDS 35.0%
ATAATATTCCCTCATGTGGA+GGG - chr8.1:2145494-2145513 MS.gene012613:intron 35.0%
ATGCGACAGGATAGTATTAT+GGG + chr8.1:2146082-2146101 None:intergenic 35.0%
ATTACCGTCTGGAAAATTAC+CGG - chr8.1:2143365-2143384 MS.gene012613:intron 35.0%
ATTGAATCTACCACATGCAT+TGG + chr8.1:2146231-2146250 None:intergenic 35.0%
ATTGTAGTCGATGGAAGTAA+CGG - chr8.1:2142861-2142880 MS.gene012613:CDS 35.0%
ATTTGGAAGTAAATAGCCAC+CGG - chr8.1:2145158-2145177 MS.gene012613:intron 35.0%
CAAAGTTCAAAATCTCGGTT+GGG - chr8.1:2145429-2145448 MS.gene012613:intron 35.0%
CAAGAACTAGAAGAGAGATA+TGG - chr8.1:2145726-2145745 MS.gene012613:intron 35.0%
CAAGATCATTCACCTTCAAT+TGG - chr8.1:2146484-2146503 MS.gene012613:intron 35.0%
CCAATAGATTTATATCCTCC+TGG + chr8.1:2145135-2145154 None:intergenic 35.0%
CCAGGAGGATATAAATCTAT+TGG - chr8.1:2145132-2145151 MS.gene012613:intron 35.0%
CGAACCAAAGTTCAAAATCT+CGG - chr8.1:2145424-2145443 MS.gene012613:intron 35.0%
CTTCAAATTGAATGTGTGTC+GGG - chr8.1:2146191-2146210 MS.gene012613:intron 35.0%
CTTGAGTCCTATATTTGACA+TGG - chr8.1:2143610-2143629 MS.gene012613:CDS 35.0%
GAACAAAAGTTGGGTAAACA+TGG - chr8.1:2143489-2143508 MS.gene012613:CDS 35.0%
GCTTATAATAGTGATGGCAA+GGG - chr8.1:2142597-2142616 MS.gene012613:intron 35.0%
GTACATGAAAAGTCACATAG+AGG - chr8.1:2147383-2147402 MS.gene012613:intron 35.0%
GTAGTAGTTTCTAAGTAACC+TGG + chr8.1:2142917-2142936 None:intergenic 35.0%
GTTTCTAAGTAACCTGGTAT+CGG + chr8.1:2142911-2142930 None:intergenic 35.0%
TAACATTTATCCACAAGGCA+TGG - chr8.1:2146958-2146977 MS.gene012613:intron 35.0%
TACAGAAATGGTGTCTCAAT+AGG - chr8.1:2146832-2146851 MS.gene012613:intron 35.0%
TACGGATACACAGTAAGATA+TGG - chr8.1:2147749-2147768 MS.gene012613:intron 35.0%
TAGAATTCTTGCCCATGATA+TGG + chr8.1:2145188-2145207 None:intergenic 35.0%
TAGATTTGGAGAGGTCAATT+GGG - chr8.1:2145315-2145334 MS.gene012613:intron 35.0%
TATCTATCGAACCAAATACC+AGG - chr8.1:2146116-2146135 MS.gene012613:intron 35.0%
TATGTGATTGAAGACTCTTC+AGG + chr8.1:2145801-2145820 None:intergenic 35.0%
TCGAATAATATTCCCTCATG+TGG - chr8.1:2145490-2145509 MS.gene012613:intron 35.0%
TGAGATTTGGATCATCTTGT+TGG + chr8.1:2147326-2147345 None:intergenic 35.0%
TGATCTTCCAAAGTGAGATT+TGG + chr8.1:2147339-2147358 None:intergenic 35.0%
TGCTTATAATAGTGATGGCA+AGG - chr8.1:2142596-2142615 MS.gene012613:intron 35.0%
TGGAAGAAAATTCAGGTAAG+AGG + chr8.1:2146669-2146688 None:intergenic 35.0%
TTATAAGGACTGGATAGGAT+AGG + chr8.1:2144262-2144281 None:intergenic 35.0%
TTGCTTCCTAAACAAAGGAT+TGG + chr8.1:2144206-2144225 None:intergenic 35.0%
TTTATGGAGTGAATTCGTGT+AGG - chr8.1:2147120-2147139 MS.gene012613:intron 35.0%
TTTGATTAATGTCTCCTTGC+AGG - chr8.1:2142831-2142850 MS.gene012613:CDS 35.0%
! AGAAGTGTATATTACCTACC+TGG + chr8.1:2146137-2146156 None:intergenic 35.0%
! ATAATGGAAGGAAGCATACT+TGG + chr8.1:2145211-2145230 None:intergenic 35.0%
! CAAAAAGTGATGAAAGTGCA+GGG - chr8.1:2144076-2144095 MS.gene012613:intron 35.0%
! CCAAAAAGTGATGAAAGTGT+AGG + chr8.1:2143096-2143115 None:intergenic 35.0%
! GATTTTTCCAATCTCCAACT+TGG + chr8.1:2143421-2143440 None:intergenic 35.0%
! TCTTTTATGTTTGACGAGCA+GGG - chr8.1:2145858-2145877 MS.gene012613:intron 35.0%
! TTCTTTTATGTTTGACGAGC+AGG - chr8.1:2145857-2145876 MS.gene012613:intron 35.0%
! TTGGTGATAGAGTAAAGTAC+TGG - chr8.1:2145920-2145939 MS.gene012613:intron 35.0%
!! AACATGGGATGAGTTTTTAG+AGG - chr8.1:2143505-2143524 MS.gene012613:CDS 35.0%
!! ACTTGGTGTATATGCAATCT+TGG + chr8.1:2146759-2146778 None:intergenic 35.0%
!! ATCTCTCTTCTAGTTCTTGT+GGG + chr8.1:2145725-2145744 None:intergenic 35.0%
!! CCTACACTTTCATCACTTTT+TGG - chr8.1:2143093-2143112 MS.gene012613:intron 35.0%
!! GAAGGTGCTTATAATAGTGA+TGG - chr8.1:2142591-2142610 MS.gene012613:intron 35.0%
!! GGTGATTTTCTAGTGAAAGA+CGG + chr8.1:2144982-2145001 None:intergenic 35.0%
!! GTTCTAAAGCGTAGTTTAAG+TGG + chr8.1:2142754-2142773 None:intergenic 35.0%
!! GTTTTTAGAGGAGAGATCAT+AGG - chr8.1:2143517-2143536 MS.gene012613:CDS 35.0%
!! TATCTCTCTTCTAGTTCTTG+TGG + chr8.1:2145726-2145745 None:intergenic 35.0%
!! TTATTTTATGTTGTGCACGC+GGG + chr8.1:2144698-2144717 None:intergenic 35.0%
!!! CTGCACTTTCATCACTTTTT+GGG + chr8.1:2144077-2144096 None:intergenic 35.0%
!!! CTTTCATCACTTTTTGGGAT+TGG - chr8.1:2143099-2143118 MS.gene012613:intron 35.0%
!!! CTTTCATCACTTTTTGGGAT+TGG + chr8.1:2143118-2143099 None:intergenic 35.0%
!!! GAAAGCTTTATTTTCTTCCC+CGG + chr8.1:2143387-2143406 None:intergenic 35.0%
!!! TTTTTTTCGAAGAAGCTGCA+TGG + chr8.1:2144653-2144672 None:intergenic 35.0%
AAAGACACGTGATTGAAAGG+GGG + chr8.1:2143805-2143824 None:intergenic 40.0%
AACTAGAAGAGAGATATGGG+GGG - chr8.1:2145730-2145749 MS.gene012613:intron 40.0%
AACTGGGATAACTTCACTCA+CGG - chr8.1:2142627-2142646 MS.gene012613:intron 40.0%
AACTGGTAGCTTACTGTGAT+TGG + chr8.1:2145767-2145786 None:intergenic 40.0%
AAGAGAAAGTTAGTGGGGAA+TGG + chr8.1:2142433-2142452 None:intergenic 40.0%
AAGATATGGATTCCACCATG+TGG - chr8.1:2147763-2147782 MS.gene012613:CDS 40.0%
AATGTTACCTTTGAGCAGCA+AGG + chr8.1:2145374-2145393 None:intergenic 40.0%
ACCAAGTGTGATTCTAGATC+TGG - chr8.1:2146772-2146791 MS.gene012613:intron 40.0%
ACTGGTAGCTTACTGTGATT+GGG + chr8.1:2145766-2145785 None:intergenic 40.0%
AGTCCCAAAGAGAAAGTTAG+TGG + chr8.1:2142440-2142459 None:intergenic 40.0%
AGTTGTCATTGACAACAACG+TGG + chr8.1:2142350-2142369 None:intergenic 40.0%
CAACTCTACAGCTGACAAAT+TGG - chr8.1:2146449-2146468 MS.gene012613:intron 40.0%
CATGCGACAGGATAGTATTA+TGG + chr8.1:2146083-2146102 None:intergenic 40.0%
CATTTCTGTATCCACTTGTC+AGG + chr8.1:2146822-2146841 None:intergenic 40.0%
CCAAAGTTCAAAATCTCGGT+TGG - chr8.1:2145428-2145447 MS.gene012613:intron 40.0%
CCAAATTACCTCGTATCACT+TGG - chr8.1:2145958-2145977 MS.gene012613:intron 40.0%
CCAAGTGATACGAGGTAATT+TGG + chr8.1:2145961-2145980 None:intergenic 40.0%
CCAAGTGTGATTCTAGATCT+GGG - chr8.1:2146773-2146792 MS.gene012613:intron 40.0%
CCACGTGGCATGATATAATT+GGG - chr8.1:2143930-2143949 MS.gene012613:intron 40.0%
CCACGTGGCATGATATAATT+GGG + chr8.1:2143949-2143930 None:intergenic 40.0%
CCACTCAAAGTTATCAAGCA+AGG + chr8.1:2147726-2147745 None:intergenic 40.0%
CTGACAAGTGGATACAGAAA+TGG - chr8.1:2146820-2146839 MS.gene012613:intron 40.0%
CTTTCCTGAAACAACAGAGA+CGG + chr8.1:2147673-2147692 None:intergenic 40.0%
GAAAGACACGTGATTGAAAG+GGG + chr8.1:2143806-2143825 None:intergenic 40.0%
GAACTAGAAGAGAGATATGG+GGG - chr8.1:2145729-2145748 MS.gene012613:intron 40.0%
GACTTAGAGTAACAAAGGGT+TGG + chr8.1:2145692-2145711 None:intergenic 40.0%
GGACTCAAGTTCAACTCAAT+TGG + chr8.1:2143599-2143618 None:intergenic 40.0%
GTAGATTTGGAGAGGTCAAT+TGG - chr8.1:2145314-2145333 MS.gene012613:intron 40.0%
GTCAATGACAACTCTGTATC+TGG - chr8.1:2142357-2142376 MS.gene012613:CDS 40.0%
GTCCCAAAGAGAAAGTTAGT+GGG + chr8.1:2142439-2142458 None:intergenic 40.0%
TAATACGACACCAATGCATG+TGG - chr8.1:2146218-2146237 MS.gene012613:intron 40.0%
TATCGAACCAAATACCAGGT+AGG - chr8.1:2146120-2146139 MS.gene012613:intron 40.0%
TCAGTGTAGCATAATCCACA+TGG + chr8.1:2147781-2147800 None:intergenic 40.0%
TCCCAAAGAGAAAGTTAGTG+GGG + chr8.1:2142438-2142457 None:intergenic 40.0%
TCCCCACTAACTTTCTCTTT+GGG - chr8.1:2142434-2142453 MS.gene012613:CDS 40.0%
TCGTGTAGGTTTCCACTATT+TGG - chr8.1:2147134-2147153 MS.gene012613:intron 40.0%
TGTTACAGACTCCATTTAGC+TGG - chr8.1:2146933-2146952 MS.gene012613:intron 40.0%
TTACCGTCTGGAAAATTACC+GGG - chr8.1:2143366-2143385 MS.gene012613:intron 40.0%
TTCCCCACTAACTTTCTCTT+TGG - chr8.1:2142433-2142452 MS.gene012613:CDS 40.0%
TTGTAGTCGATGGAAGTAAC+GGG - chr8.1:2142862-2142881 MS.gene012613:CDS 40.0%
TTGTGAACAGAGGGTAGATT+TGG - chr8.1:2145301-2145320 MS.gene012613:intron 40.0%
TTTCAATGTGGATCAAACCC+AGG - chr8.1:2145114-2145133 MS.gene012613:intron 40.0%
! AGGCTTTGTCAACAGCAATA+AGG - chr8.1:2147403-2147422 MS.gene012613:intron 40.0%
! AGTATTATGGGCTGCTACAA+AGG + chr8.1:2146070-2146089 None:intergenic 40.0%
! CATCGAAGGAGATTCTGAAA+AGG - chr8.1:2146041-2146060 MS.gene012613:intron 40.0%
! CCAAAAAGTGATGAAAGTGC+AGG - chr8.1:2144075-2144094 MS.gene012613:intron 40.0%
! CCAACCGAGATTTTGAACTT+TGG + chr8.1:2145431-2145450 None:intergenic 40.0%
! CCTTGCTTGATAACTTTGAG+TGG - chr8.1:2147723-2147742 MS.gene012613:intron 40.0%
! GTATTATGGGCTGCTACAAA+GGG + chr8.1:2146069-2146088 None:intergenic 40.0%
!! ACATGCATTGGTGTCGTATT+AGG + chr8.1:2146219-2146238 None:intergenic 40.0%
!! CCTGCACTTTCATCACTTTT+TGG + chr8.1:2144078-2144097 None:intergenic 40.0%
!! TAACCTGGTATCGGTGATAA+TGG + chr8.1:2142902-2142921 None:intergenic 40.0%
AAAGAGATGGAGGACGTTCT+TGG - chr8.1:2146640-2146659 MS.gene012613:intron 45.0%
AACAGAGGGTAGATTTGGAG+AGG - chr8.1:2145306-2145325 MS.gene012613:intron 45.0%
AACGGTATCCAAGTGATACG+AGG + chr8.1:2145969-2145988 None:intergenic 45.0%
AAGAACGTCCTCCATCTCTT+TGG + chr8.1:2146641-2146660 None:intergenic 45.0%
AAGGGAAAATCAATGGCAGC+CGG + chr8.1:2143720-2143739 None:intergenic 45.0%
AATCTCCAACTTGGCCTCTA+CGG + chr8.1:2143412-2143431 None:intergenic 45.0%
AATGAACCAGAGCAACGACA+TGG + chr8.1:2146006-2146025 None:intergenic 45.0%
AGAAAGTTAGTGGGGAATGG+AGG + chr8.1:2142430-2142449 None:intergenic 45.0%
AGAACGTCCTCCATCTCTTT+GGG + chr8.1:2146640-2146659 None:intergenic 45.0%
AGAGATCCACTGCATTTGAG+AGG + chr8.1:2142405-2142424 None:intergenic 45.0%
ATGGCAAGGGACAAAGTAAC+TGG - chr8.1:2142610-2142629 MS.gene012613:intron 45.0%
ATGTGAGGGGATACTTTGCA+TGG - chr8.1:2147699-2147718 MS.gene012613:intron 45.0%
ATGTGCAGCATGTGTCAACA+TGG - chr8.1:2143646-2143665 MS.gene012613:intron 45.0%
ATTCACTGGGGTGCAAAAAC+TGG - chr8.1:2147865-2147884 MS.gene012613:CDS 45.0%
CATATGTTCCCTCCACATGA+GGG + chr8.1:2145505-2145524 None:intergenic 45.0%
CATGATATAATTGGGCCACG+TGG - chr8.1:2143938-2143957 MS.gene012613:intron 45.0%
CATGATATAATTGGGCCACG+TGG + chr8.1:2143957-2143938 None:intergenic 45.0%
CCCAATTATATCATGCCACG+TGG - chr8.1:2143240-2143259 MS.gene012613:CDS 45.0%
CCCAATTATATCATGCCACG+TGG + chr8.1:2143259-2143240 None:intergenic 45.0%
CGTATCACTTGGATACCGTT+CGG - chr8.1:2145969-2145988 MS.gene012613:intron 45.0%
CTACACTGAAGAGAACTCCA+AGG - chr8.1:2147792-2147811 MS.gene012613:CDS 45.0%
CTGGTAGCTTACTGTGATTG+GGG + chr8.1:2145765-2145784 None:intergenic 45.0%
GAAGGTTCATACCTGACAAG+TGG - chr8.1:2146808-2146827 MS.gene012613:intron 45.0%
GACTGCTTCTTCTTCTTACC+AGG - chr8.1:2142456-2142475 MS.gene012613:CDS 45.0%
GCCACGTGGCATGATATAAT+TGG - chr8.1:2143929-2143948 MS.gene012613:intron 45.0%
GCCACGTGGCATGATATAAT+TGG + chr8.1:2143948-2143929 None:intergenic 45.0%
GCTGAGCAGAGAGGAAAAAT+TGG - chr8.1:2146390-2146409 MS.gene012613:intron 45.0%
GTATCACTTGGATACCGTTC+GGG - chr8.1:2145970-2145989 MS.gene012613:intron 45.0%
GTGTAGCATAATCCACATGG+TGG + chr8.1:2147778-2147797 None:intergenic 45.0%
TAATGTCTCCTTGCAGGTAG+AGG - chr8.1:2142837-2142856 MS.gene012613:CDS 45.0%
TACCGTCTGGAAAATTACCG+GGG - chr8.1:2143367-2143386 MS.gene012613:intron 45.0%
TCAGCTGTAGAGTTGCTCAT+TGG + chr8.1:2146444-2146463 None:intergenic 45.0%
TCATATGTTCCCTCCACATG+AGG + chr8.1:2145506-2145525 None:intergenic 45.0%
TGACCATTATCACCGATACC+AGG - chr8.1:2142896-2142915 MS.gene012613:CDS 45.0%
TGGCAAGGGACAAAGTAACT+GGG - chr8.1:2142611-2142630 MS.gene012613:intron 45.0%
TGTAGTCGATGGAAGTAACG+GGG - chr8.1:2142863-2142882 MS.gene012613:CDS 45.0%
TTCAAAATCTCGGTTGGGAG+AGG - chr8.1:2145434-2145453 MS.gene012613:intron 45.0%
TTGCCCATGATATGGAAAGC+CGG + chr8.1:2145180-2145199 None:intergenic 45.0%
! AAAACTAACAGAGTGCCACG+TGG - chr8.1:2143217-2143236 MS.gene012613:CDS 45.0%
! AAAACTAACAGAGTGCCACG+TGG + chr8.1:2143236-2143217 None:intergenic 45.0%
! ACAGTTTTCTCCATGCCTTG+TGG + chr8.1:2146971-2146990 None:intergenic 45.0%
! AGTTTTCACGTCGCCTTTGA+CGG - chr8.1:2143676-2143695 MS.gene012613:intron 45.0%
! ATGTCGTTGCTCTGGTTCAT+TGG - chr8.1:2146005-2146024 MS.gene012613:intron 45.0%
! CCCAGATCTAGAATCACACT+TGG + chr8.1:2146776-2146795 None:intergenic 45.0%
! GCAATCGTAACTTGCATCGA+AGG - chr8.1:2146027-2146046 MS.gene012613:intron 45.0%
! TCTGGGACTTCAAGAACAGA+AGG - chr8.1:2146790-2146809 MS.gene012613:intron 45.0%
! TTCCCCGGTAATTTTCCAGA+CGG + chr8.1:2143372-2143391 None:intergenic 45.0%
!! ACGTGGCACTCTGTTAGTTT+TGG - chr8.1:2143955-2143974 MS.gene012613:intron 45.0%
!! ACGTGGCACTCTGTTAGTTT+TGG + chr8.1:2143974-2143955 None:intergenic 45.0%
!! CGTCTCTGTTGTTTCAGGAA+AGG - chr8.1:2147671-2147690 MS.gene012613:intron 45.0%
!! TACCAGCTTGCTGATAACCT+TGG + chr8.1:2147812-2147831 None:intergenic 45.0%
!! AAATTAAGATTAAATTAAAT+AGG + chr8.1:2142563-2142582 None:intergenic 5.0%
!!! ATAAATCTAAATATTTTATA+GGG - chr8.1:2147295-2147314 MS.gene012613:intron 5.0%
!!! TTATATTATTTTTTTTTTGA+AGG + chr8.1:2144625-2144644 None:intergenic 5.0%
ACATATCAGGCTGAGCAGAG+AGG - chr8.1:2146381-2146400 MS.gene012613:intron 50.0%
AGGAAAGGAGCAGATGTGAG+GGG - chr8.1:2147686-2147705 MS.gene012613:intron 50.0%
ATGGAGGATACACACCCGAA+CGG + chr8.1:2145987-2146006 None:intergenic 50.0%
CAATGTGGATCAAACCCAGG+AGG - chr8.1:2145117-2145136 MS.gene012613:intron 50.0%
CAGGAAAGGAGCAGATGTGA+GGG - chr8.1:2147685-2147704 MS.gene012613:intron 50.0%
CCTGAAACAACAGAGACGGT+TGG + chr8.1:2147669-2147688 None:intergenic 50.0%
CTACAATGCCTCTACCTGCA+AGG + chr8.1:2142848-2142867 None:intergenic 50.0%
CTCCAAGGTTATCAGCAAGC+TGG - chr8.1:2147807-2147826 MS.gene012613:CDS 50.0%
CTTGATGCCTTGCTGCTCAA+AGG - chr8.1:2145364-2145383 MS.gene012613:intron 50.0%
TATCCTCCATGTCGTTGCTC+TGG - chr8.1:2145997-2146016 MS.gene012613:intron 50.0%
TCAGGAAAGGAGCAGATGTG+AGG - chr8.1:2147684-2147703 MS.gene012613:intron 50.0%
TCCACTGCATTTGAGAGGAG+AGG + chr8.1:2142400-2142419 None:intergenic 50.0%
TCCTCTCCTCTCAAATGCAG+TGG - chr8.1:2142396-2142415 MS.gene012613:CDS 50.0%
TGGGATAACTTCACTCACGG+AGG - chr8.1:2142630-2142649 MS.gene012613:intron 50.0%
TTCTTCCGTAGAGGCCAAGT+TGG - chr8.1:2143404-2143423 MS.gene012613:CDS 50.0%
TTTGGAGAGGTCAATTGGGC+TGG - chr8.1:2145319-2145338 MS.gene012613:intron 50.0%
! GTAGAGGCCAAGTTGGAGAT+TGG - chr8.1:2143411-2143430 MS.gene012613:CDS 50.0%
! TGGAAGTAACGGGGATATCG+CGG - chr8.1:2142872-2142891 MS.gene012613:CDS 50.0%
!! CCAACCGTCTCTGTTGTTTC+AGG - chr8.1:2147666-2147685 MS.gene012613:intron 50.0%
!! CCACCGGCTTTCCATATCAT+GGG - chr8.1:2145174-2145193 MS.gene012613:intron 50.0%
!! GGTAGAGGCATTGTAGTCGA+TGG - chr8.1:2142852-2142871 MS.gene012613:CDS 50.0%
!! TTTTCTTGTGAGGTGCCACG+TGG + chr8.1:2143258-2143277 None:intergenic 50.0%
CCCATGATATGGAAAGCCGG+TGG + chr8.1:2145177-2145196 None:intergenic 55.0%
GAACCAGAGCAACGACATGG+AGG + chr8.1:2146003-2146022 None:intergenic 55.0%
GTCACTGTCACCACCGTCAA+AGG + chr8.1:2143692-2143711 None:intergenic 55.0%
TTTCACGTCGCCTTTGACGG+TGG - chr8.1:2143679-2143698 MS.gene012613:intron 55.0%
!! GCCACCGGCTTTCCATATCA+TGG - chr8.1:2145173-2145192 MS.gene012613:intron 55.0%
!! TTTTCTTGTGGGGTGCCACG+TGG - chr8.1:2143915-2143934 MS.gene012613:intron 55.0%
CAACTGCAGCTGCATGCGAC+AGG + chr8.1:2146095-2146114 None:intergenic 60.0%
GTGGTGACAGTGACGAGCAC+CGG - chr8.1:2143698-2143717 MS.gene012613:intron 60.0%
! TGTTGTGCACGCGGGTTGCA+TGG + chr8.1:2144690-2144709 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 2142337 2147901 2142337 ID=MS.gene012613
chr8.1 mRNA 2142337 2147901 2142337 ID=MS.gene012613.t1;Parent=MS.gene012613
chr8.1 exon 2147761 2147901 2147761 ID=MS.gene012613.t1.exon1;Parent=MS.gene012613.t1
chr8.1 CDS 2147761 2147901 2147761 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2147587 2147650 2147587 ID=MS.gene012613.t1.exon2;Parent=MS.gene012613.t1
chr8.1 CDS 2147587 2147650 2147587 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2147321 2147385 2147321 ID=MS.gene012613.t1.exon3;Parent=MS.gene012613.t1
chr8.1 CDS 2147321 2147385 2147321 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2145027 2145102 2145027 ID=MS.gene012613.t1.exon4;Parent=MS.gene012613.t1
chr8.1 CDS 2145027 2145102 2145027 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2144853 2144927 2144853 ID=MS.gene012613.t1.exon5;Parent=MS.gene012613.t1
chr8.1 CDS 2144853 2144927 2144853 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2144466 2144553 2144466 ID=MS.gene012613.t1.exon6;Parent=MS.gene012613.t1
chr8.1 CDS 2144466 2144553 2144466 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2144101 2144359 2144101 ID=MS.gene012613.t1.exon7;Parent=MS.gene012613.t1
chr8.1 CDS 2144101 2144359 2144101 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2143733 2143848 2143733 ID=MS.gene012613.t1.exon8;Parent=MS.gene012613.t1
chr8.1 CDS 2143733 2143848 2143733 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2143377 2143632 2143377 ID=MS.gene012613.t1.exon9;Parent=MS.gene012613.t1
chr8.1 CDS 2143377 2143632 2143377 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2143195 2143297 2143195 ID=MS.gene012613.t1.exon10;Parent=MS.gene012613.t1
chr8.1 CDS 2143195 2143297 2143195 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2142814 2142922 2142814 ID=MS.gene012613.t1.exon11;Parent=MS.gene012613.t1
chr8.1 CDS 2142814 2142922 2142814 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
chr8.1 exon 2142337 2142550 2142337 ID=MS.gene012613.t1.exon12;Parent=MS.gene012613.t1
chr8.1 CDS 2142337 2142550 2142337 ID=cds.MS.gene012613.t1;Parent=MS.gene012613.t1
Gene Sequence

>MS.gene012613

ATGGGATTTTCCACGTTGTTGTCAATGACAACTCTGTATCTGGAGATATTGCTGCTGCTTCCTCTCCTCTCAAATGCAGTGGATCTCTCTCCTCCATTCCCCACTAACTTTCTCTTTGGGACTGCTTCTTCTTCTTACCAGGTATATACATATCTTCAAAGCATATAGATATAGTACTACAATTCATTCAAATGTTAAAAAATCAATTGTTTGTTAATTATATCCTATTTAATTTAATCTTAATTTCACAGTATGAAGGTGCTTATAATAGTGATGGCAAGGGACAAAGTAACTGGGATAACTTCACTCACGGAGGTAACAAAAATTTTAATCTGCAAATATTATTAGCATGTTAGTAGTGAAAGTTTGAATCATGATTTTTTTTCTCAAACTCTTTTAAGTGTCTTAGCTCAACCACTTAAACTACGCTTTAGAACCGATTACTTATTGTACCATATGCTTTGCTCGAATTTAAATATACGCCTTAATAGTAGTTTGATTAATGTCTCCTTGCAGGTAGAGGCATTGTAGTCGATGGAAGTAACGGGGATATCGCGGTTGACCATTATCACCGATACCAGGTTACTTAGAAACTACTACTCCATTTTAAAAATAATTGTATACAAATATCACAACTCCGAATTAAAATCATTTAAGCACACTCATAAAATACATATCATTTACTTATTTTAAAATATATATTATTTGATTCTTTACTCTTAGGTATTTTTTTTTGGCTTAAATGTGTGTTTGATCCCTACACTTTCATCACTTTTTGGGATTGGTCCTTACACTTTTTTTTGTTTGGTTTTAGTCCTTGCAGTTTGTAAATAAATTGGTTTTGGTCCTTCTGTTAGTTCAATGTTAAAAAACAAAAACCAAAACTAACAGAGTGCCACGTGGCCCAATTATATCATGCCACGTGGCACCTCACAAGAAAAAAATTAAAATTAAAAAGAATTCAGATAAAATAATTGTTTTTAAATTATTATTATTATTATTATTTTTGACAAAAAATTATTATTATTATTACCGTCTGGAAAATTACCGGGGAAGAAAATAAAGCTTTCTTCCGTAGAGGCCAAGTTGGAGATTGGAAAAATCTTCTCTCAATTGAAATTTAAAATGATTGAACGGTTAAATACAGTAACAGAACAAAAGTTGGGTAAACATGGGATGAGTTTTTAGAGGAGAGATCATAGGAGTGAACAAGCAATTGAGACTATATATTGCACTGTTTTAGATTTTTAAGTGTTGCGCCAATTGAGTTGAACTTGAGTCCTATATTTGACATGGTTTATTGAGCTTTATGTGCAGCATGTGTCAACATGGTTTATTGAGTTTTCACGTCGCCTTTGACGGTGGTGACAGTGACGAGCACCGGCTGCCATTGATTTTCCCTTCCTTTTTTTATTTCTCTGTCTTCTTCTCCCTTTCTTTTTTTTTTGTTGGTTACAATCTTCTTCCCCCTTTCAATCACGTGTCTTTCTTTCTTTTTTAATTTTTTATTTCTAAAAATAATAATAATACTAATTTAAAAACAATTATTTCATCTGAATTCTTTTTAATTTTAATTTTTTTTCTTGTGGGGTGCCACGTGGCATGATATAATTGGGCCACGTGGCACTCTGTTAGTTTTGGTTTTTTTTTTAACATTGAACTAACAGAAGGACCAAAACCAATTTATTTACAAACTGTAAGGACCAAAACCAAACAAAAAAAAGTATAAGGACCAATCCCAAAAAGTGATGAAAGTGCAGGGATCAAACACACATTTAAGCCTTTTTTTTTTTCATTCATGTGTCTATTTACTTGTGATGAAAATAAAAAAGTAAAATAAAAAGTGTATCTCTATATCCATATAATCCAATCCTTTGTTTAGGAAGCAAATACTTAAAGTACTAATGAGACAAATCGGTAATCCTATCCTATCCAGTCCTTATAATTATATTATAATAATTAAAAAAAAAATCAGCTTCAGATCCCCTATAAATTATTATATCCTCTTATTAAAAAATTTAGAGAAATACTGTTTATGCAACCATTTTAATACACTTGTTAAAAAAACAACCATTTTAATACAACTTTTAGGACAATTATTTCTCTGATACTTTTATTGTGCTCTTATTATCTTACTCAATTTTTCTTTCTTTATCATTTTTGTCTCAAAAAATGAAAACAAAAGTTGTCGTAATTTTTTTCTCAAAATGATCGTGCAAATATCATTATTCAAAAAATTAATATATCCATTTAATTTTAGTAATTTCAAAATAATAATATAACCTCCTTCAAAAAAAAAATAATATAACTTATCCATGCAGCTTCTTCGAAAAAAATAGTATAAATATATCCATGCAACCCGCGTGCACAACATAAAATAATGCGATGGTGTTTATTTATAAAATTAAATTAAGATAGTCAAACAAAATAGCATAAATAATCAAATAAAAATTCACAAAATGATAATGAAAGTACACCCACCTACAGTCAAAGTAATTTTATTTTTTAATAGATTTTTAGTTAGTTTAATCTCTTAATTTTTTTTTAAATTTTGCAGTTTATCTTTTTTCAGTATACTTAATACTTGGAAGTTCATTTTTTGTCACAATAATTACGAATTAAATCAATTAAATTGTTTAGCACCGTCTTTCACTAGAAAATCACCAACTAAAACAACACATTCCATTTCAAATTCATTAAATTTTAACAAGGCCACAATTTTGGTCTTTTGCATTTGAATTTGGTGTACAAGACAAAATCAAATAGAATTTTCATAATTTCAATGTGGATCAAACCCAGGAGGATATAAATCTATTGGAAGATTTGGAAGTAAATAGCCACCGGCTTTCCATATCATGGGCAAGAATTCTACCAAGTATGCTTCCTTCCATTATCAAAATCTTTGTAAAATTAATATTCCAACAAATATTATTAGTTGTAATAATATGGATTCCTTGTATATGATTGTGAACAGAGGGTAGATTTGGAGAGGTCAATTGGGCTGGTATAGACTTCTATAACAAACTACTTGATGCCTTGCTGCTCAAAGGTAACATTTGAAAAATGACCTAGATTTCTATAACATAGCGAACCAAAGTTCAAAATCTCGGTTGGGAGAGGTGTCCATATCTAATATCACAATTCACACATGTTTCGAATAATATTCCCTCATGTGGAGGGAACATATGAAAAACAGCAAAAAAAATGTTAGGAAAAAAAAAATTATCTCTATTTTTTCTCTCCCAAAATACTTATCAATGAAGAATTCATCTTAAATGAGGAGCAATAGTTAATAGTTATTAATCTATTGTAGTATTGCTCAACATTGGTTTTCTTTTTCTTGATCAGGTATCCAACCCTTTGTTACTCTAAGTCACTATGACATCCCACAAGAACTAGAAGAGAGATATGGGGGGTTGCTAAGTCCCCAATCACAGTAAGCTACCAGTTTTTCAAATTGACCTGAAGAGTCTTCAATCACATATTAACCATATAAACTCATAATTAAAGATCATTGCTTTTCTTTTATGTTTGACGAGCAGGGAAGATTTTGCATTTTATGCGGACCTATGTTTTAAAACATTTGGTGATAGAGTAAAGTACTGGATCACATTCAACGAGCCAAATTACCTCGTATCACTTGGATACCGTTCGGGTGTGTATCCTCCATGTCGTTGCTCTGGTTCATTGGCAATCGTAACTTGCATCGAAGGAGATTCTGAAAAGGAGCCCTTTGTAGCAGCCCATAATACTATCCTGTCGCATGCAGCTGCAGTTGATATCTATCGAACCAAATACCAGGTAGGTAATATACACTTCTTGTTTTTGGTTTTCGTATATGTAACACATTGACACTTCAAATTGAATGTGTGTCGGGTGCCTAATACGACACCAATGCATGTGGTAGATTCAATAATTTCTATTTTATCAAATTATTACCAATGTCAACTTGTATGTTCTTGCTGATCGACTTCATAGATTTCTCAAATCATACGAACTATAGTTATTTGATTTGATTGTAAAACATTGTATATTAAAAGTGAAACATATCAGGCTGAGCAGAGAGGAAAAATTGGAATAGTAGTTTCACATGAATGGTATGAACCAATGAGCAACTCTACAGCTGACAAATTGGCTACTGAAAGAGCAAGATCATTCACCTTCAATTGGTATAATTCTCCTTTAGAAACTAATATAATATATAGCTTTTTCTATTGATTCACTCGAAGTATAAGGAAGAGAGCCTCATATACTCAAATAAAAATACAGGATTTTGGACCCAATCATATTTGGTAAATACCCCAAAGAGATGGAGGACGTTCTTGGAAGCCTCTTACCTGAATTTTCTTCCAATGAAAAAAAGAAACTCAAGAAAGGATTGGATTTTATTGGCATCAATTACTACACAGCTTTCTATGTCCAAGATTGCATATACACCAAGTGTGATTCTAGATCTGGGACTTCAAGAACAGAAGGTTCATACCTGACAAGTGGATACAGAAATGGTGTCTCAATAGGAGAAGCTGTAAGTATCCTTCAAACTTATTATAGTGTGGTCCATTATCACCAATAATTTTTCTGATGCTTTTTTTGTCATGTTACAGACTCCATTTAGCTGGTTTAACATTTATCCACAAGGCATGGAGAAAACTGTTACATATGTGAAAGATAGGTACAACAATACTCCAATGTTCATAACTGAAAATGGTAAGCAAGCAAGACATATTAATGTTTTGATGAGTGCCACTAACATTCCTTACAACAATCTCTTTTAAACGCTCTTTTTATGGAGTGAATTCGTGTAGGTTTCCACTATTTGGAAAATGTATTTCACATAAAGTGATGAGATGTATATGAATTCTACTAATAAAAGAGAATATGTATGAAAATGTATGTTGGAGCGAGTGATATTAACATTTTTCTAATACTTGGTCACAATAATTTTATGTGCATTTGTGATAAATCTAAATATTTTATAGGGTATGGCCAACAAGATGATCCAAATCTCACTTTGGAAGATCAACTCAATGATTTTAAGAGAATAAAGTACATGAAAAGTCACATAGAGGCTTTGTCAACAGCAATAAGGTAAGAGTAAAATATAACTTCTTTTTAAATAAAAATAACATAAACGATATAAAACATGTATATGAAGGATTCCAATTTTAACTATATTGTTATCAATTTTCCTTAAATAAAAACCTACATTGTTAGTTATCAATTTTGTTACTCTGGCATCTTATTATAATTTTATCTAATCAAATGTTGGAACACCTGTAATTGTTTGCTTTGACATTAATCAAACATTATGAGAATGAAATAAATTTTTCCAACCGTCTCTGTTGTTTCAGGAAAGGAGCAGATGTGAGGGGATACTTTGCATGGTCCTTGCTTGATAACTTTGAGTGGATATACGGATACACAGTAAGATATGGATTCCACCATGTGGATTATGCTACACTGAAGAGAACTCCAAGGTTATCAGCAAGCTGGTACAAGCAATTCATTGCGAATTATAAACAAACTGAATTCACTGGGGTGCAAAAACTGGTGCAAAGTACATGA
Protein sequence

>MS.gene012613.t1

MGFSTLLSMTTLYLEILLLLPLLSNAVDLSPPFPTNFLFGTASSSYQYEGAYNSDGKGQSNWDNFTHGGRGIVVDGSNGDIAVDHYHRYQEDINLLEDLEVNSHRLSISWARILPKGRFGEVNWAGIDFYNKLLDALLLKGIQPFVTLSHYDIPQELEERYGGLLSPQSQEDFAFYADLCFKTFGDRVKYWITFNEPNYLVSLGYRSGVYPPCRCSGSLAIVTCIEGDSEKEPFVAAHNTILSHAAAVDIYRTKYQAEQRGKIGIVVSHEWYEPMSNSTADKLATERARSFTFNWILDPIIFGKYPKEMEDVLGSLLPEFSSNEKKKLKKGLDFIGINYYTAFYVQDCIYTKCDSRSGTSRTEGSYLTSGYRNGVSIGEATPFSWFNIYPQGMEKTVTYVKDRYNNTPMFITENGYGQQDDPNLTLEDQLNDFKRIKYMKSHIEALSTAIRKGADVRGYFAWSLLDNFEWIYGYTVRYGFHHVDYATLKRTPRLSASWYKQFIANYKQTEFTGVQKLVQST