AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87551

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87551.t1 MTR_4g023000 97.976 494 10 0 1 494 1 494 0.0 1013
MS.gene87551.t1 MTR_3g026280 73.469 490 128 2 6 494 5 493 0.0 774
MS.gene87551.t1 MTR_2g098790 59.841 503 188 4 6 494 12 514 0.0 633
MS.gene87551.t1 MTR_2g098540 60.721 499 186 4 6 494 9 507 0.0 631
MS.gene87551.t1 MTR_6g078450 59.394 495 195 3 6 494 18 512 0.0 620
MS.gene87551.t1 MTR_2g098520 62.134 478 175 3 23 494 33 510 0.0 615
MS.gene87551.t1 MTR_6g078330 59.000 500 193 5 7 494 14 513 0.0 614
MS.gene87551.t1 MTR_6g078380 60.040 498 192 3 3 493 15 512 0.0 606
MS.gene87551.t1 MTR_4g066580 60.251 478 184 3 23 494 38 515 0.0 606
MS.gene87551.t1 MTR_3g028720 60.000 480 186 3 21 494 35 514 0.0 603
MS.gene87551.t1 MTR_4g066590 60.714 476 181 3 23 492 32 507 0.0 603
MS.gene87551.t1 MTR_4g066630 60.084 476 184 3 23 492 38 513 0.0 600
MS.gene87551.t1 MTR_2g098540 61.790 458 169 3 43 494 6 463 0.0 597
MS.gene87551.t1 MTR_4g066210 58.491 477 192 3 24 494 43 519 0.0 583
MS.gene87551.t1 MTR_5g071520 59.918 489 181 4 21 494 36 524 0.0 581
MS.gene87551.t1 MTR_4g066240 58.071 477 194 3 24 494 36 512 0.0 579
MS.gene87551.t1 MTR_4g066240 57.950 478 194 4 24 494 36 513 0.0 575
MS.gene87551.t1 MTR_4g066330 56.452 496 184 3 6 494 23 493 0.0 574
MS.gene87551.t1 MTR_4g066640 55.649 478 204 4 23 494 38 513 0.0 561
MS.gene87551.t1 MTR_4g066280 56.042 480 179 3 22 494 39 493 0.0 558
MS.gene87551.t1 MTR_6g078450 59.226 439 173 3 6 438 18 456 0.0 541
MS.gene87551.t1 MTR_3g026620 53.138 478 218 2 21 494 35 510 0.0 530
MS.gene87551.t1 MTR_4g066340 58.295 434 175 3 67 494 6 439 0.0 526
MS.gene87551.t1 MTR_3g026400 52.621 477 220 2 22 494 35 509 0.0 523
MS.gene87551.t1 MTR_3g028720 58.391 435 175 3 10 438 24 458 0.0 522
MS.gene87551.t1 MTR_4g066630 58.865 423 168 3 23 439 38 460 0.0 517
MS.gene87551.t1 MTR_3g028720 59.500 400 160 2 10 407 24 423 2.99e-176 502
MS.gene87551.t1 MTR_6g078330 58.191 409 165 3 92 494 1 409 2.05e-175 499
MS.gene87551.t1 MTR_4g066580 60.724 387 150 2 23 407 38 424 5.58e-175 499
MS.gene87551.t1 MTR_4g083000 48.703 501 245 7 2 493 5 502 5.96e-174 499
MS.gene87551.t1 MTR_3g026400 51.528 458 216 2 41 494 23 478 1.23e-172 495
MS.gene87551.t1 MTR_4g066630 59.690 387 154 2 23 407 38 424 2.59e-172 493
MS.gene87551.t1 MTR_4g015420 50.198 506 208 8 6 494 47 525 7.18e-171 492
MS.gene87551.t1 MTR_2g043200 53.040 477 186 8 29 494 70 519 5.12e-170 489
MS.gene87551.t1 MTR_5g044000 47.985 521 234 9 2 492 7 520 2.44e-168 485
MS.gene87551.t1 MTR_4g067040 60.267 375 147 2 23 395 33 407 4.25e-166 475
MS.gene87551.t1 MTR_4g066240 57.772 386 161 2 24 407 36 421 1.01e-165 475
MS.gene87551.t1 MTR_6g078330 56.927 397 163 4 104 494 15 409 4.77e-163 468
MS.gene87551.t1 MTR_4g015460 49.296 497 209 9 13 493 31 500 5.78e-163 471
MS.gene87551.t1 MTR_3g033810 48.125 480 224 7 23 493 20 483 3.44e-160 464
MS.gene87551.t1 MTR_4g081530 47.211 502 253 6 1 493 1 499 1.10e-158 461
MS.gene87551.t1 MTR_4g067040 60.857 350 135 2 23 370 33 382 5.81e-157 451
MS.gene87551.t1 MTR_3g033790 46.985 481 237 7 18 493 13 480 6.45e-157 455
MS.gene87551.t1 MTR_0110s0040 48.734 474 236 5 24 494 43 512 9.17e-157 456
MS.gene87551.t1 MTR_6g078330 58.356 365 144 4 7 363 14 378 3.36e-156 449
MS.gene87551.t1 MTR_3g028720 57.808 365 152 2 10 372 24 388 1.02e-154 446
MS.gene87551.t1 MTR_2g022760 45.833 504 261 5 1 494 10 511 1.68e-154 450
MS.gene87551.t1 MTR_0110s0030 47.890 474 240 5 24 494 43 512 2.76e-154 449
MS.gene87551.t1 MTR_4g131810 46.512 473 242 5 29 492 33 503 2.63e-152 444
MS.gene87551.t1 MTR_4g066630 59.531 341 136 2 23 361 38 378 3.40e-151 436
MS.gene87551.t1 MTR_2g079550 45.720 479 245 6 23 492 29 501 4.82e-147 431
MS.gene87551.t1 MTR_2g022710 43.227 502 268 6 7 494 11 509 1.19e-146 430
MS.gene87551.t1 MTR_4g066640 52.895 380 167 4 5 374 12 389 2.99e-146 424
MS.gene87551.t1 MTR_2g079580 44.468 479 251 6 23 492 31 503 5.42e-146 429
MS.gene87551.t1 MTR_4g131800 44.511 501 268 5 1 494 493 990 2.92e-143 437
MS.gene87551.t1 MTR_7g068910 45.272 497 258 8 2 494 9 495 1.00e-142 420
MS.gene87551.t1 MTR_7g068910 44.379 507 258 9 2 494 9 505 1.53e-139 412
MS.gene87551.t1 MTR_4g083000 49.024 410 199 5 92 493 1 408 1.00e-138 406
MS.gene87551.t1 MTR_4g016920 46.737 475 237 9 23 492 26 489 1.32e-137 407
MS.gene87551.t1 MTR_3g026400 57.367 319 134 1 22 340 35 351 4.95e-135 395
MS.gene87551.t1 MTR_7g033860 42.769 484 265 6 13 492 36 511 5.33e-133 395
MS.gene87551.t1 MTR_1g088610 44.511 501 242 10 10 493 7 488 1.74e-131 395
MS.gene87551.t1 MTR_1g088610 38.053 113 67 2 382 493 503 613 1.98e-13 73.2
MS.gene87551.t1 MTR_5g068740 43.713 501 247 10 10 493 7 489 1.74e-131 391
MS.gene87551.t1 MTR_0108s0030 43.432 472 242 7 22 492 1 448 1.68e-129 384
MS.gene87551.t1 MTR_2g079580 45.128 390 204 4 23 407 31 415 1.40e-123 367
MS.gene87551.t1 MTR_2g022710 41.928 446 243 5 7 438 11 454 1.53e-123 369
MS.gene87551.t1 MTR_2g022710 41.928 446 243 5 7 438 11 454 3.01e-123 369
MS.gene87551.t1 MTR_2g022760 45.122 410 216 4 92 494 1 408 6.52e-123 365
MS.gene87551.t1 MTR_2g022710 43.309 411 221 4 7 407 11 419 1.44e-120 360
MS.gene87551.t1 MTR_2g022710 42.439 410 227 4 92 494 1 408 3.90e-118 353
MS.gene87551.t1 MTR_2g022710 43.108 399 215 4 7 395 11 407 7.79e-116 347
MS.gene87551.t1 MTR_7g051610 41.263 475 265 4 19 492 70 531 2.41e-115 350
MS.gene87551.t1 MTR_7g051510 40.862 487 254 6 19 494 70 533 4.34e-114 347
MS.gene87551.t1 MTR_0110s0040 51.266 316 151 2 24 339 43 355 1.50e-113 341
MS.gene87551.t1 MTR_7g051650 39.496 476 273 5 19 492 70 532 2.91e-113 345
MS.gene87551.t1 MTR_7g051650 39.076 476 271 4 19 492 70 528 2.83e-112 342
MS.gene87551.t1 MTR_1g088630 42.013 457 221 11 43 493 14 432 3.23e-111 337
MS.gene87551.t1 MTR_4g016920 46.059 406 204 8 92 492 1 396 5.17e-111 335
MS.gene87551.t1 MTR_2g022710 43.850 374 198 4 7 370 11 382 6.84e-108 327
MS.gene87551.t1 MTR_7g068900 42.754 414 219 8 87 493 17 419 9.50e-106 324
MS.gene87551.t1 MTR_1g088630 47.923 313 132 4 26 336 29 312 1.09e-97 299
MS.gene87551.t1 MTR_7g056747 40.389 411 219 6 86 492 9 397 2.63e-94 292
MS.gene87551.t1 MTR_1g088630 52.075 265 120 3 20 282 23 282 3.61e-93 285
MS.gene87551.t1 MTR_4g016920 53.175 252 115 2 92 342 1 250 2.66e-87 270
MS.gene87551.t1 MTR_0110s0020 53.070 228 104 2 24 251 43 267 1.24e-83 261
MS.gene87551.t1 MTR_4g122980 26.238 404 229 12 88 484 183 524 1.48e-27 116
MS.gene87551.t1 MTR_5g069350 39.306 173 59 6 337 494 48 189 1.59e-23 98.2
MS.gene87551.t1 MTR_8g038650 35.714 98 63 0 248 345 56 153 4.92e-15 73.2
MS.gene87551.t1 MTR_8g038650 49.296 71 33 2 32 102 6 73 9.21e-14 69.3
MS.gene87551.t1 MTR_4g061170 65.116 43 13 1 439 479 22 64 2.39e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87551.t1 AT5G44640 57.661 496 206 3 1 492 6 501 0.0 608
MS.gene87551.t1 AT2G44450 59.539 477 192 1 19 494 26 502 0.0 606
MS.gene87551.t1 AT5G42260 58.607 488 200 2 3 488 10 497 0.0 605
MS.gene87551.t1 AT3G60130 57.203 472 200 2 24 493 30 501 0.0 575
MS.gene87551.t1 AT2G25630 54.878 492 201 4 5 492 9 483 0.0 562
MS.gene87551.t1 AT2G44480 52.174 483 224 3 16 492 58 539 0.0 531
MS.gene87551.t1 AT2G44480 52.174 483 224 3 16 492 27 508 0.0 530
MS.gene87551.t1 AT3G60140 48.996 498 243 8 6 494 9 504 4.04e-173 499
MS.gene87551.t1 AT3G60130 56.585 410 176 2 86 493 40 449 1.36e-172 494
MS.gene87551.t1 AT5G24550 48.343 513 244 10 1 494 1 511 4.66e-170 490
MS.gene87551.t1 AT3G18080 50.210 476 227 6 24 494 39 509 4.90e-165 477
MS.gene87551.t1 AT5G54570 48.755 482 236 5 20 492 26 505 3.76e-164 475
MS.gene87551.t1 AT5G24540 49.414 512 240 9 1 494 1 511 3.93e-164 475
MS.gene87551.t1 AT3G60130 54.878 410 172 3 86 493 40 438 4.46e-163 469
MS.gene87551.t1 AT5G36890 49.487 487 227 7 15 493 5 480 1.06e-162 470
MS.gene87551.t1 AT5G36890 49.487 487 227 7 15 493 5 480 1.19e-162 469
MS.gene87551.t1 AT2G44470 46.850 508 255 8 1 494 1 507 1.05e-161 471
MS.gene87551.t1 AT3G18070 49.372 478 226 8 24 494 30 498 3.17e-161 466
MS.gene87551.t1 AT3G18070 49.163 478 221 8 24 494 30 492 4.87e-161 466
MS.gene87551.t1 AT1G51470 48.536 478 230 8 23 494 44 511 9.64e-159 461
MS.gene87551.t1 AT1G26560 48.233 481 237 7 21 492 29 506 1.38e-158 460
MS.gene87551.t1 AT1G47600 48.117 478 232 7 23 494 44 511 7.37e-158 458
MS.gene87551.t1 AT1G47600 48.117 478 231 8 23 494 44 510 1.15e-157 458
MS.gene87551.t1 AT2G44490 47.433 487 244 7 18 493 8 493 1.59e-157 459
MS.gene87551.t1 AT2G44460 48.692 497 244 8 5 492 10 504 7.35e-157 458
MS.gene87551.t1 AT3G60120 47.746 488 244 8 16 494 6 491 1.05e-156 456
MS.gene87551.t1 AT2G44480 50.614 407 194 3 92 492 1 406 2.35e-152 441
MS.gene87551.t1 AT1G61820 44.622 502 263 7 5 494 8 506 2.19e-149 437
MS.gene87551.t1 AT4G21760 46.467 467 243 5 29 492 59 521 3.79e-149 437
MS.gene87551.t1 AT2G44450 56.410 351 152 1 145 494 1 351 3.78e-147 425
MS.gene87551.t1 AT2G32860 43.416 486 266 6 16 492 86 571 3.00e-144 427
MS.gene87551.t1 AT1G61810 42.490 506 271 8 5 494 8 509 4.87e-143 421
MS.gene87551.t1 AT4G21760 45.610 467 237 6 29 492 59 511 6.75e-143 421
MS.gene87551.t1 AT4G27830 44.490 490 253 8 6 492 11 484 8.78e-143 420
MS.gene87551.t1 AT2G32860 43.648 488 261 8 16 492 86 570 2.41e-142 422
MS.gene87551.t1 AT1G75940 43.825 502 260 10 9 493 22 518 5.95e-141 416
MS.gene87551.t1 AT5G26000 44.358 514 257 11 1 492 5 511 3.04e-140 414
MS.gene87551.t1 AT3G09260 45.530 481 249 9 24 494 35 512 3.12e-140 414
MS.gene87551.t1 AT5G25980 45.511 479 247 10 24 493 50 523 5.43e-140 414
MS.gene87551.t1 AT1G61810 42.626 495 264 8 5 483 8 498 2.96e-139 412
MS.gene87551.t1 AT3G60140 48.276 406 204 6 6 407 9 412 6.04e-139 408
MS.gene87551.t1 AT5G54570 47.073 427 216 4 20 438 26 450 9.30e-139 407
MS.gene87551.t1 AT1G02850 45.208 480 242 9 20 493 22 486 1.25e-138 409
MS.gene87551.t1 AT1G66270 45.643 482 242 9 24 492 36 510 1.98e-138 409
MS.gene87551.t1 AT2G44470 45.796 452 231 7 1 439 1 451 2.03e-138 407
MS.gene87551.t1 AT4G22100 42.455 497 268 7 1 493 1 483 2.36e-138 408
MS.gene87551.t1 AT1G66280 44.246 504 259 9 7 492 11 510 4.43e-138 408
MS.gene87551.t1 AT3G21370 44.330 485 252 9 23 493 32 512 1.07e-137 407
MS.gene87551.t1 AT1G66270 45.436 482 241 10 24 492 36 508 5.00e-136 403
MS.gene87551.t1 AT1G60090 41.767 498 268 7 3 493 1 483 8.26e-136 402
MS.gene87551.t1 AT5G24540 47.253 455 222 8 1 438 1 454 1.01e-134 397
MS.gene87551.t1 AT3G03640 42.718 515 273 10 1 494 1 514 1.85e-134 399
MS.gene87551.t1 AT1G02850 43.340 503 241 10 20 493 22 509 4.22e-134 398
MS.gene87551.t1 AT4G27820 44.468 479 239 9 23 492 22 482 8.00e-134 397
MS.gene87551.t1 AT1G52400 43.827 486 249 9 24 493 39 516 9.73e-134 397
MS.gene87551.t1 AT1G52400 43.827 486 249 9 24 493 39 516 9.73e-134 397
MS.gene87551.t1 AT1G02850 43.452 504 240 11 20 493 22 510 3.21e-132 393
MS.gene87551.t1 AT5G54570 47.805 410 203 5 92 492 1 408 5.78e-132 390
MS.gene87551.t1 AT1G45191 42.191 493 262 6 5 493 11 484 1.38e-131 391
MS.gene87551.t1 AT1G60090 40.748 508 266 8 3 493 1 490 1.96e-131 391
MS.gene87551.t1 AT3G62750 41.548 491 257 9 5 492 10 473 9.54e-131 389
MS.gene87551.t1 AT5G28510 42.029 483 264 8 24 492 39 519 9.98e-131 390
MS.gene87551.t1 AT3G62750 41.548 491 257 9 5 492 36 499 2.96e-130 388
MS.gene87551.t1 AT1G45191 42.394 493 272 5 5 493 11 495 8.70e-130 387
MS.gene87551.t1 AT1G45191 42.400 500 274 6 5 493 11 507 3.14e-129 386
MS.gene87551.t1 AT1G45191 41.988 493 269 7 5 493 11 490 5.34e-129 385
MS.gene87551.t1 AT2G44480 55.700 307 136 0 16 322 58 364 3.37e-127 376
MS.gene87551.t1 AT1G02850 43.542 480 223 10 20 493 22 459 2.41e-126 376
MS.gene87551.t1 AT3G62740 41.387 476 254 9 23 492 22 478 2.76e-125 375
MS.gene87551.t1 AT5G26000 43.450 458 232 9 1 438 5 455 1.34e-122 366
MS.gene87551.t1 AT5G25980 44.313 422 223 8 24 438 50 466 3.41e-121 363
MS.gene87551.t1 AT5G25980 44.313 422 223 8 24 438 50 466 3.41e-121 363
MS.gene87551.t1 AT2G44470 48.077 364 180 5 1 356 1 363 2.91e-119 355
MS.gene87551.t1 AT1G61810 41.928 415 226 6 5 407 8 419 1.62e-116 350
MS.gene87551.t1 AT3G62750 40.816 441 228 9 5 443 36 445 2.85e-114 345
MS.gene87551.t1 AT3G18070 50.765 327 155 4 24 350 30 350 2.26e-113 340
MS.gene87551.t1 AT4G27830 43.812 404 216 6 92 492 1 396 2.03e-112 339
MS.gene87551.t1 AT1G02850 43.990 416 192 8 20 407 22 424 2.90e-112 339
MS.gene87551.t1 AT1G61810 42.373 413 224 7 92 494 1 409 3.65e-112 338
MS.gene87551.t1 AT3G62740 41.805 421 221 8 23 438 22 423 6.25e-111 335
MS.gene87551.t1 AT1G52400 42.791 430 223 8 24 438 39 460 8.08e-111 336
MS.gene87551.t1 AT1G45191 45.380 368 186 5 5 365 11 370 8.42e-106 322
MS.gene87551.t1 AT1G60270 44.475 362 189 5 10 365 7 362 9.18e-106 320
MS.gene87551.t1 AT1G45191 46.045 354 180 4 5 355 11 356 9.54e-106 322
MS.gene87551.t1 AT4G27820 42.927 410 212 8 92 492 1 397 4.49e-105 320
MS.gene87551.t1 AT4G27820 42.927 410 212 8 92 492 1 397 4.49e-105 320
MS.gene87551.t1 AT5G48375 39.955 443 198 9 19 457 33 411 2.28e-104 319
MS.gene87551.t1 AT3G62750 44.706 340 167 4 5 344 10 328 1.50e-102 312
MS.gene87551.t1 AT3G62750 44.706 340 167 4 5 344 10 328 1.50e-102 312
MS.gene87551.t1 AT2G44460 48.189 359 176 7 143 492 1 358 1.86e-102 314
MS.gene87551.t1 AT3G18070 47.590 332 163 5 170 494 94 421 2.44e-102 313
MS.gene87551.t1 AT3G18070 46.753 77 40 1 24 100 30 105 3.60e-16 80.9
MS.gene87551.t1 AT3G62750 44.706 340 167 4 5 344 36 354 1.37e-101 311
MS.gene87551.t1 AT3G62750 40.347 404 222 7 92 492 1 388 2.85e-100 307
MS.gene87551.t1 AT3G62750 40.347 404 222 7 92 492 1 388 2.85e-100 307
MS.gene87551.t1 AT1G61810 45.918 294 152 2 5 292 8 300 2.53e-97 296
MS.gene87551.t1 AT1G51490 45.714 350 167 8 32 374 28 361 2.76e-97 300
MS.gene87551.t1 AT1G61820 41.144 367 205 5 137 494 3 367 3.55e-97 298
MS.gene87551.t1 AT3G18070 47.284 313 154 5 189 494 1 309 1.64e-95 291
MS.gene87551.t1 AT2G44480 45.215 303 159 3 196 492 1 302 3.31e-92 283
MS.gene87551.t1 AT1G60270 44.043 277 150 2 92 365 1 275 6.28e-78 246
MS.gene87551.t1 AT3G18070 46.281 242 126 2 170 408 94 334 4.06e-70 227
MS.gene87551.t1 AT3G18070 46.753 77 40 1 24 100 30 105 2.14e-16 80.9
MS.gene87551.t1 AT3G18070 45.740 223 117 2 189 408 1 222 2.70e-63 206
MS.gene87551.t1 AT5G16580 36.452 310 176 5 144 449 7 299 8.22e-54 183
MS.gene87551.t1 AT3G06510 27.778 414 212 16 87 484 159 501 2.48e-29 122
MS.gene87551.t1 AT3G06510 27.273 429 229 18 87 484 159 535 1.59e-28 119

Find 121 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTACTTACTCAATTT+TGG 0.021918 4.1:+75382658 None:intergenic
ATTATTTACATAACAGAAAA+TGG 0.227544 4.1:-75379727 MS.gene87551:intron
AGTCTACAGGCAGAAGTTTC+AGG 0.233974 4.1:-75382102 MS.gene87551:intron
CTTGATTAATTCCTCCCTTT+AGG 0.240918 4.1:+75382906 None:intergenic
AATACTCAAAAGGGTCAAAT+TGG 0.282073 4.1:-75381705 MS.gene87551:CDS
CGTAGGACCCTTTGACCATT+AGG 0.303963 4.1:+75380554 None:intergenic
GTGGCAAAGGACCAAGTATA+TGG 0.314819 4.1:-75384728 MS.gene87551:CDS
TCCACGCAGGCAAGGAATAT+TGG 0.316966 4.1:+75380492 None:intergenic
CTTTATAGCACTCAAGGTTA+TGG 0.319215 4.1:-75382248 MS.gene87551:CDS
TTTGTGTTTGTCAAGGTTCA+TGG 0.319761 4.1:-75380659 MS.gene87551:intron
ATATCGGATTTAATGCTTAT+AGG 0.323102 4.1:-75383120 MS.gene87551:CDS
TTTCCACATGATTTCCTGTT+TGG 0.345440 4.1:-75384886 MS.gene87551:CDS
TGGCCCTTTGAAGATATAAT+AGG 0.347595 4.1:+75379527 None:intergenic
GAATAGTTGGCCGCAGTAAT+GGG 0.361472 4.1:-75383297 MS.gene87551:CDS
CAAGCTCTTGAAGATGAATA+TGG 0.378007 4.1:-75382695 MS.gene87551:CDS
TCTAGTAGTCCTTGAATTCC+CGG 0.379007 4.1:+75379778 None:intergenic
GTCTATCCACCGGGAATTCA+AGG 0.380315 4.1:-75379787 MS.gene87551:CDS
TTGATATCAATTCATTTATG+AGG 0.383023 4.1:+75382861 None:intergenic
CTTGTATCAGCTCTAAGAAA+TGG 0.398854 4.1:-75380348 MS.gene87551:intron
ACTTTGAACAATGTCGGTTA+AGG 0.405792 4.1:-75384980 None:intergenic
GAGTGAAATAGAGTTATAAA+TGG 0.406414 4.1:+75382728 None:intergenic
GACTCCGAAGATACCGTAAA+AGG 0.412472 4.1:-75379163 MS.gene87551:CDS
TTCGAGAAGTCAATTCCTAA+TGG 0.417279 4.1:-75380569 MS.gene87551:CDS
AATTGACTTCTCGAAAACTT+TGG 0.422485 4.1:+75380577 None:intergenic
AACAGCTTCTTCAGCTTACC+AGG 0.431880 4.1:-75384863 MS.gene87551:intron
GCTGGCTACACACTCCGCTT+TGG 0.432294 4.1:-75379212 MS.gene87551:CDS
TCTATAACAGAATACTCAAA+AGG 0.434099 4.1:-75381715 MS.gene87551:intron
GAAGTATGCTTCAGAGAATT+CGG 0.436392 4.1:-75382311 MS.gene87551:CDS
CTGCAGCGTGAGAAAGAATC+AGG 0.440111 4.1:+75382132 None:intergenic
GACTTTGTTAACTATTACTG+CGG 0.442947 4.1:+75380612 None:intergenic
ATACTTTGCCTGGTCATTGT+TGG 0.443682 4.1:-75379252 MS.gene87551:CDS
CTGAAGAAGCTGTTCCAAAC+AGG 0.445998 4.1:+75384872 None:intergenic
GGTTCTTCAGATAGAATAGT+TGG 0.453820 4.1:-75383310 MS.gene87551:intron
CTAAGAAATGGAGTTCTCAT+TGG 0.464815 4.1:-75380336 MS.gene87551:CDS
AGAATAGTTGGCCGCAGTAA+TGG 0.466746 4.1:-75383298 MS.gene87551:CDS
GGACAGAGAAGCAACGTCTC+GGG 0.468018 4.1:-75381634 MS.gene87551:CDS
CAGGAATGGAGTGAGGGTGA+AGG 0.473824 4.1:-75379276 MS.gene87551:CDS
GTCAATTCCTAATGGTCAAA+GGG 0.482994 4.1:-75380561 MS.gene87551:CDS
AGGAATGGAGTGAGGGTGAA+GGG 0.485673 4.1:-75379275 MS.gene87551:CDS
TTACTCACGAGGTAGTAATC+TGG 0.492260 4.1:+75383081 None:intergenic
CCATTGCTTTATAGCACTCA+AGG 0.495840 4.1:-75382254 MS.gene87551:CDS
CGGGATATGTACCAGAGTGC+AGG 0.496117 4.1:+75380632 None:intergenic
GTGGCCATGATGAAGGATAT+CGG 0.506728 4.1:-75383136 MS.gene87551:CDS
TCGGTGACAGAGTTAAGCAT+TGG 0.507027 4.1:-75382292 MS.gene87551:CDS
ATTCATCTTCAAGAGCTTGA+GGG 0.509735 4.1:+75382699 None:intergenic
GTGTATGTCGATTACAAGAA+TGG 0.511471 4.1:-75379185 MS.gene87551:CDS
AGCACTCAAGGTTATGGAAG+TGG 0.512096 4.1:-75382242 MS.gene87551:CDS
CTGCAGCAGTAAAAGTCTAC+AGG 0.513396 4.1:-75382115 MS.gene87551:CDS
TGACTAATATAGTCTATCCT+TGG 0.515053 4.1:+75379553 None:intergenic
ACCACCTATTATATCTTCAA+AGG 0.520438 4.1:-75379531 MS.gene87551:CDS
CAGGTGGTGTGTAACTACAT+AGG 0.524621 4.1:+75382151 None:intergenic
GGGTGAAGGGATACTTTGCC+TGG 0.524890 4.1:-75379262 MS.gene87551:CDS
TGTTGCAGGCTGCCTCAGAC+TGG 0.525397 4.1:-75379816 MS.gene87551:intron
ATGAGGTTGATGATGGCAAA+AGG 0.527542 4.1:-75379591 MS.gene87551:CDS
TATTCATCTTCAAGAGCTTG+AGG 0.530370 4.1:+75382698 None:intergenic
GGAAGATGTGGCCATGATGA+AGG 0.534290 4.1:-75383143 MS.gene87551:CDS
GTAGCGGTGGTATGAATCAA+TGG 0.535833 4.1:+75383267 None:intergenic
TGGCAAAGGACCAAGTATAT+GGG 0.536712 4.1:-75384727 MS.gene87551:CDS
AAACATTTGGCTTTCCACGC+AGG 0.538542 4.1:+75380479 None:intergenic
AGTCAATTCCTAATGGTCAA+AGG 0.539323 4.1:-75380562 MS.gene87551:CDS
GAGAAAAGAAAATTGTTGCA+AGG 0.543701 4.1:+75384944 None:intergenic
GATTTGGCAGGAATGGAGTG+AGG 0.544251 4.1:-75379283 MS.gene87551:intron
ACTAAGGACCATCTCATTTG+CGG 0.546678 4.1:+75379114 None:intergenic
AGGACAGAGAAGCAACGTCT+CGG 0.547397 4.1:-75381635 MS.gene87551:CDS
AAAGGGTCCTACGATTTCGT+TGG 0.548003 4.1:-75380544 MS.gene87551:CDS
GTGAAGGTATCCCATATACT+TGG 0.548987 4.1:+75384717 None:intergenic
CTATAACAGAATACTCAAAA+GGG 0.550128 4.1:-75381714 MS.gene87551:intron
CCACCTATTATATCTTCAAA+GGG 0.552408 4.1:-75379530 MS.gene87551:CDS
GCCACTATCCCAATCAAAAG+AGG 0.552999 4.1:-75381655 MS.gene87551:CDS
TCGGTAGCTAACTGCAATGC+CGG 0.553805 4.1:-75382191 MS.gene87551:CDS
CTGGCTCTATGTCTATCCAC+CGG 0.556878 4.1:-75379797 MS.gene87551:CDS
TTTGGCTTTCCACGCAGGCA+AGG 0.566076 4.1:+75380484 None:intergenic
ACCTGGGTGGTTATGAGTGA+AGG 0.566894 4.1:+75384701 None:intergenic
TACCGACTTAGAGCATCTCA+TGG 0.567305 4.1:+75382208 None:intergenic
ATAAATGAATTGATATCAAG+TGG 0.568096 4.1:-75382857 MS.gene87551:intron
AGGTGGTGTGTAACTACATA+GGG 0.571427 4.1:+75382152 None:intergenic
GCAGCACATGAAGGTGGCAA+AGG 0.573301 4.1:-75384741 MS.gene87551:CDS
TGGAGTTCTCATTGGTCCAA+AGG 0.577265 4.1:-75380328 MS.gene87551:intron
GGGCTCAGTACTAGAATCAC+CGG 0.585315 4.1:+75382172 None:intergenic
GAGTAACACTAAATTCTGCA+TGG 0.589219 4.1:-75381683 MS.gene87551:CDS
GGGATATGTACCAGAGTGCA+GGG 0.589935 4.1:+75380633 None:intergenic
GCCAATATTCCTTGCCTGCG+TGG 0.590326 4.1:-75380493 MS.gene87551:CDS
CCTTGAGTGCTATAAAGCAA+TGG 0.592832 4.1:+75382254 None:intergenic
ACTTTGTTAACTATTACTGC+GGG 0.593060 4.1:+75380613 None:intergenic
TTCATGGAACCCCTGCACTC+TGG 0.594112 4.1:-75380643 MS.gene87551:CDS
AAGGGAGGAATTAATCAAGA+AGG 0.596031 4.1:-75382902 MS.gene87551:CDS
AAATCCGATATCCTTCATCA+TGG 0.596988 4.1:+75383132 None:intergenic
GACTTAGAGCATCTCATGGG+TGG 0.600122 4.1:+75382212 None:intergenic
TCAGGTGGAAACCTAAAGGG+AGG 0.600801 4.1:-75382917 MS.gene87551:intron
TGATTCATACCACCGCTACA+AGG 0.605261 4.1:-75383263 MS.gene87551:intron
AGTAATAGTTAACAAAGTCA+AGG 0.607195 4.1:-75380608 MS.gene87551:CDS
ATGAAAGTACCTTGTAGCGG+TGG 0.612379 4.1:+75383254 None:intergenic
AATCATGTGGAAAACTGCTA+CGG 0.613067 4.1:+75384896 None:intergenic
TATGAAGGAGCAGCACATGA+AGG 0.615594 4.1:-75384750 MS.gene87551:CDS
AAAATTGTCCAACAATGACC+AGG 0.618606 4.1:+75379244 None:intergenic
TGGCTCTATGTCTATCCACC+GGG 0.621502 4.1:-75379796 MS.gene87551:CDS
GGAATCGATGAGGTTGATGA+TGG 0.622765 4.1:-75379598 MS.gene87551:CDS
GACAGAGAAGCAACGTCTCG+GGG 0.624446 4.1:-75381633 MS.gene87551:CDS
ACCGACTTAGAGCATCTCAT+GGG 0.625987 4.1:+75382209 None:intergenic
AATAGTTGGCCGCAGTAATG+GGG 0.627163 4.1:-75383296 MS.gene87551:CDS
ACCCATGAGATGCTCTAAGT+CGG 0.628465 4.1:-75382210 MS.gene87551:CDS
GTTCACTCCTCAGGAAGATG+TGG 0.630108 4.1:-75383155 MS.gene87551:intron
CCCTTTGAAGATATAATAGG+TGG 0.635376 4.1:+75379530 None:intergenic
ATTTGGCAGGAATGGAGTGA+GGG 0.635423 4.1:-75379282 MS.gene87551:intron
GTTTAAACCAACGAAATCGT+AGG 0.647385 4.1:+75380537 None:intergenic
GCTCTTGAAGATGAATATGG+TGG 0.649801 4.1:-75382692 MS.gene87551:CDS
ACCTTCACTCATAACCACCC+AGG 0.652283 4.1:-75384702 MS.gene87551:intron
GAAGGAGCAGCACATGAAGG+TGG 0.653042 4.1:-75384747 MS.gene87551:CDS
GTTCCAAACAGGAAATCATG+TGG 0.659740 4.1:+75384883 None:intergenic
ATAGACATAGAGCCAGTCTG+AGG 0.660389 4.1:+75379804 None:intergenic
GGTCACTTGATGACAAACCA+AGG 0.674419 4.1:-75379570 MS.gene87551:CDS
AAAATGAAAGTACCTTGTAG+CGG 0.682139 4.1:+75383251 None:intergenic
AATATATGTAGGAATCGATG+AGG 0.684204 4.1:-75379608 MS.gene87551:intron
CGACATACACAAGTCCAAAG+CGG 0.696987 4.1:+75379198 None:intergenic
ACCGTAAAAGGTCTGCATTG+TGG 0.697987 4.1:-75379151 MS.gene87551:CDS
AGTAGTCCTTGAATTCCCGG+TGG 0.699197 4.1:+75379781 None:intergenic
CAGCGTGAGAAAGAATCAGG+TGG 0.705805 4.1:+75382135 None:intergenic
GGATATGTACCAGAGTGCAG+GGG 0.708874 4.1:+75380634 None:intergenic
TGGCAACATCCCCATTACTG+CGG 0.709524 4.1:+75383287 None:intergenic
AGAAGAGATTCAAACCTGGG+TGG 0.712348 4.1:+75384688 None:intergenic
AGGACTACTAGAATACACCA+AGG 0.740101 4.1:-75379767 MS.gene87551:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATGTTAAGAAAAT+AGG - chr4.1:75381663-75381682 MS.gene87551:CDS 10.0%
!! ATACAAATTAATTACAATTT+AGG - chr4.1:75382066-75382085 MS.gene87551:intron 10.0%
!! TAATGTAAATTATATTAATG+TGG - chr4.1:75382982-75383001 MS.gene87551:intron 10.0%
!!! AAATATACTAGTTTATTTTA+AGG + chr4.1:75381314-75381333 None:intergenic 10.0%
!!! ATATTGAAAAGATTTTAATT+GGG - chr4.1:75380286-75380305 MS.gene87551:intron 10.0%
!! AAAAGTTATGAATAAAACTA+AGG - chr4.1:75384084-75384103 MS.gene87551:intron 15.0%
!! AAATTGATTAAAAACTTAGA+AGG - chr4.1:75382953-75382972 MS.gene87551:intron 15.0%
!! ATGGGTAAATTAAAATAATA+AGG - chr4.1:75379915-75379934 MS.gene87551:intron 15.0%
!! ATTATTTACATAACAGAAAA+TGG - chr4.1:75384370-75384389 MS.gene87551:intron 15.0%
!! CACAAAAAACATTAAAAAAA+AGG + chr4.1:75379469-75379488 None:intergenic 15.0%
!! TTTAATACACATACAAATAA+AGG + chr4.1:75382753-75382772 None:intergenic 15.0%
!!! GATATTGAAAAGATTTTAAT+TGG - chr4.1:75380285-75380304 MS.gene87551:intron 15.0%
!!! TCAATATCTTTAATTTCTAA+GGG + chr4.1:75380273-75380292 None:intergenic 15.0%
!!! TTCAATATCTTTAATTTCTA+AGG + chr4.1:75380274-75380293 None:intergenic 15.0%
!!! TTTTCTGTTATGTAAATAAT+TGG + chr4.1:75384370-75384389 None:intergenic 15.0%
!! AACTTTAATATTCCAATTCA+GGG + chr4.1:75380057-75380076 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG - chr4.1:75382796-75382815 MS.gene87551:intron 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG - chr4.1:75382794-75382813 MS.gene87551:intron 20.0%
!! ACATGATTCAGTATAATTAT+AGG + chr4.1:75379575-75379594 None:intergenic 20.0%
!! ATAAATGAATTGATATCAAG+TGG - chr4.1:75381240-75381259 MS.gene87551:intron 20.0%
!! ATAATTAGTTGCAACTAATA+TGG - chr4.1:75381546-75381565 MS.gene87551:intron 20.0%
!! ATATTAAAGTTAGTTACACT+TGG - chr4.1:75380066-75380085 MS.gene87551:intron 20.0%
!! ATTGTTGACATATATAATCT+TGG + chr4.1:75380557-75380576 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG - chr4.1:75382795-75382814 MS.gene87551:intron 20.0%
!! CTAATCATTCAAATATATGT+AGG - chr4.1:75384478-75384497 MS.gene87551:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - chr4.1:75382878-75382897 MS.gene87551:CDS 20.0%
!! TAACTTTAATATTCCAATTC+AGG + chr4.1:75380058-75380077 None:intergenic 20.0%
!! TAATTAGTTGCAACTAATAT+GGG - chr4.1:75381547-75381566 MS.gene87551:intron 20.0%
!! TAGAATCCTAATTAAATCTT+TGG - chr4.1:75384792-75384811 MS.gene87551:intron 20.0%
!! TATATTAATGTGGAATACAT+AGG - chr4.1:75382992-75383011 MS.gene87551:intron 20.0%
!! TCTATATTCTGACTTTAAAT+CGG - chr4.1:75380387-75380406 MS.gene87551:intron 20.0%
!! TGTATGATAAATTGCTAATT+TGG - chr4.1:75381103-75381122 MS.gene87551:intron 20.0%
!! TTGATATCAATTCATTTATG+AGG + chr4.1:75381239-75381258 None:intergenic 20.0%
!! TTTAATCAATTTATACGAAG+TGG + chr4.1:75382945-75382964 None:intergenic 20.0%
!!! ACAATTACTTACTCAATTTT+GGG + chr4.1:75381441-75381460 None:intergenic 20.0%
!!! ATAAGTTGTTACATTTTACT+TGG - chr4.1:75383807-75383826 MS.gene87551:intron 20.0%
!!! CAATGAAATATTCATTTTTG+AGG + chr4.1:75383375-75383394 None:intergenic 20.0%
!!! CTTAACTATATTGTTTTTTC+AGG - chr4.1:75381162-75381181 MS.gene87551:intron 20.0%
!!! GTAATCCAATTTTTATATGA+CGG - chr4.1:75380422-75380441 MS.gene87551:intron 20.0%
!!! TAAATATTGTGACATTTTCT+TGG - chr4.1:75380766-75380785 MS.gene87551:intron 20.0%
!!! TACAATTACTTACTCAATTT+TGG + chr4.1:75381442-75381461 None:intergenic 20.0%
!!! TCATTTTCTCAACTTATTAT+CGG - chr4.1:75379594-75379613 MS.gene87551:CDS 20.0%
!!! TTTCTTTTAAACTCACATTA+TGG + chr4.1:75384593-75384612 None:intergenic 20.0%
!!! TTTTGTTATATGAAGTATGA+AGG - chr4.1:75379332-75379351 MS.gene87551:intron 20.0%
! AAAATAATAAGGTGATCATG+TGG - chr4.1:75379926-75379945 MS.gene87551:intron 25.0%
! AAGAAATGTGAAAAATGCAA+AGG + chr4.1:75382671-75382690 None:intergenic 25.0%
! AAGCTTATGAAAATAGCTTA+TGG - chr4.1:75383936-75383955 MS.gene87551:intron 25.0%
! AATTCTCTGTTAAGATTCAT+AGG - chr4.1:75383119-75383138 MS.gene87551:CDS 25.0%
! ACTAAAAGAATCTAAACCAA+GGG + chr4.1:75384053-75384072 None:intergenic 25.0%
! AGAAATGTGAAAAATGCAAA+GGG + chr4.1:75382670-75382689 None:intergenic 25.0%
! AGTAATAGTTAACAAAGTCA+AGG - chr4.1:75383489-75383508 MS.gene87551:intron 25.0%
! ATATCGGATTTAATGCTTAT+AGG - chr4.1:75380977-75380996 MS.gene87551:intron 25.0%
! ATCTACCTATGTAAATTGTT+TGG - chr4.1:75379291-75379310 MS.gene87551:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - chr4.1:75382842-75382861 MS.gene87551:intron 25.0%
! ATGTTGTTAGTAAAAGACTA+AGG - chr4.1:75382105-75382124 MS.gene87551:CDS 25.0%
! ATTATTGATCGAAATTCATG+CGG + chr4.1:75381614-75381633 None:intergenic 25.0%
! ATTCAATAAGAAGTTGAACA+AGG + chr4.1:75383690-75383709 None:intergenic 25.0%
! CAAAAATAAAATCAAATGGG+TGG - chr4.1:75382881-75382900 MS.gene87551:CDS 25.0%
! CAATTGTCTGTAAAAACATT+TGG + chr4.1:75383634-75383653 None:intergenic 25.0%
! CATACAAATAAAGGACAATT+TGG + chr4.1:75382744-75382763 None:intergenic 25.0%
! CATTGAAGTTAATCCAAATT+TGG + chr4.1:75380488-75380507 None:intergenic 25.0%
! CCAAATCCAAAGATTTAATT+AGG + chr4.1:75384801-75384820 None:intergenic 25.0%
! CCTAATTAAATCTTTGGATT+TGG - chr4.1:75384798-75384817 MS.gene87551:intron 25.0%
! CTATAACAGAATACTCAAAA+GGG - chr4.1:75382383-75382402 MS.gene87551:intron 25.0%
! CTATATTCTGACTTTAAATC+GGG - chr4.1:75380388-75380407 MS.gene87551:intron 25.0%
! GAATGCATAAAATCCAAATT+TGG - chr4.1:75380472-75380491 MS.gene87551:CDS 25.0%
! GAGTGAAATAGAGTTATAAA+TGG + chr4.1:75381372-75381391 None:intergenic 25.0%
! GATTTACTCTTTGATGTAAT+GGG - chr4.1:75380180-75380199 MS.gene87551:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG - chr4.1:75382877-75382896 MS.gene87551:CDS 25.0%
! GTTAGGGAAAAAAATGATAT+AGG + chr4.1:75384417-75384436 None:intergenic 25.0%
! TAGGATTTAGTGTGTTAATT+AGG - chr4.1:75383138-75383157 MS.gene87551:CDS 25.0%
! TCCAATAAGTCCTATAAATA+TGG - chr4.1:75383224-75383243 MS.gene87551:intron 25.0%
! TCCATATTTATAGGACTTAT+TGG + chr4.1:75383228-75383247 None:intergenic 25.0%
! TCTATAACAGAATACTCAAA+AGG - chr4.1:75382382-75382401 MS.gene87551:intron 25.0%
! TGATTAAAAACTTAGAAGGT+TGG - chr4.1:75382957-75382976 MS.gene87551:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG - chr4.1:75382843-75382862 MS.gene87551:intron 25.0%
! TTCAGTATAATTATAGGTGT+CGG + chr4.1:75379569-75379588 None:intergenic 25.0%
!! AACACCTACAATTTAGAATA+GGG - chr4.1:75379887-75379906 MS.gene87551:intron 25.0%
!! AATTTAGAATAGGGCTATAA+TGG - chr4.1:75379896-75379915 MS.gene87551:intron 25.0%
!! ACAATTTAGGACTTAAATCA+TGG - chr4.1:75382079-75382098 MS.gene87551:intron 25.0%
!! ATTGTTTTCATAAGCTATCT+TGG - chr4.1:75382237-75382256 MS.gene87551:CDS 25.0%
!! ATTTAGAATAGGGCTATAAT+GGG - chr4.1:75379897-75379916 MS.gene87551:intron 25.0%
!! GTTTTCATAATATTCATGTG+TGG - chr4.1:75382560-75382579 MS.gene87551:intron 25.0%
!! TAATCATTTTGTGTTTGTCA+AGG - chr4.1:75383431-75383450 MS.gene87551:intron 25.0%
!! TATCTTTAATTTCTAAGGGA+AGG + chr4.1:75380269-75380288 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - chr4.1:75382806-75382825 MS.gene87551:intron 25.0%
!! TCAATTTTCGATTATTAGCA+TGG + chr4.1:75381724-75381743 None:intergenic 25.0%
!! TTTGAAGTTAGTTACACAAT+TGG - chr4.1:75383197-75383216 MS.gene87551:intron 25.0%
!! TTTGTATTTCTATATGCTGT+TGG + chr4.1:75382053-75382072 None:intergenic 25.0%
!! TTTTCTCAATTAAAGCCTTA+TGG - chr4.1:75383299-75383318 MS.gene87551:CDS 25.0%
!!! AACTATATTGTTTTTTCAGG+TGG - chr4.1:75381165-75381184 MS.gene87551:intron 25.0%
!!! ACAAACAAAGTATTGTAACA+TGG + chr4.1:75384452-75384471 None:intergenic 25.0%
!!! CATTGTTTTCTAGTAATTTC+CGG - chr4.1:75383390-75383409 MS.gene87551:intron 25.0%
AAACACTTGTGAGAATATCT+GGG + chr4.1:75383991-75384010 None:intergenic 30.0%
AAATGTGAAAAATGCAAAGG+GGG + chr4.1:75382668-75382687 None:intergenic 30.0%
AACTCATATCATGTTTCACT+AGG + chr4.1:75383043-75383062 None:intergenic 30.0%
AATACTCAAAAGGGTCAAAT+TGG - chr4.1:75382392-75382411 MS.gene87551:intron 30.0%
AATATATGTAGGAATCGATG+AGG - chr4.1:75384489-75384508 MS.gene87551:intron 30.0%
ACATGCTAGTCCATATTTAT+AGG + chr4.1:75383237-75383256 None:intergenic 30.0%
ACCACCTATTATATCTTCAA+AGG - chr4.1:75384566-75384585 MS.gene87551:intron 30.0%
ACCTATGTAAATTGTTTGGT+TGG - chr4.1:75379295-75379314 MS.gene87551:intron 30.0%
ACTTTGTTAACTATTACTGC+GGG + chr4.1:75383487-75383506 None:intergenic 30.0%
AGTGAAACATGATATGAGTT+TGG - chr4.1:75383043-75383062 MS.gene87551:intron 30.0%
ATAAAGAAGAGATTCAAACC+TGG + chr4.1:75379416-75379435 None:intergenic 30.0%
ATAGCCCTATTCTAAATTGT+AGG + chr4.1:75379894-75379913 None:intergenic 30.0%
ATTAAATCTTTGGATTTGGC+AGG - chr4.1:75384802-75384821 MS.gene87551:intron 30.0%
CACTAAAAGAATCTAAACCA+AGG + chr4.1:75384054-75384073 None:intergenic 30.0%
CATCTAGTAATTTGAAAAGG+GGG - chr4.1:75382845-75382864 MS.gene87551:intron 30.0%
CCACCTATTATATCTTCAAA+GGG - chr4.1:75384567-75384586 MS.gene87551:intron 30.0%
CGGTTCAAACTAATTTATGT+CGG + chr4.1:75381594-75381613 None:intergenic 30.0%
CTAGACCGTCATATAAAAAT+TGG + chr4.1:75380430-75380449 None:intergenic 30.0%
CTGATACAAGTGAAACAAAA+CGG + chr4.1:75383739-75383758 None:intergenic 30.0%
GAAATGTGAAAAATGCAAAG+GGG + chr4.1:75382669-75382688 None:intergenic 30.0%
GACTTTGTTAACTATTACTG+CGG + chr4.1:75383488-75383507 None:intergenic 30.0%
GAGAAAAGAAAATTGTTGCA+AGG + chr4.1:75379156-75379175 None:intergenic 30.0%
GAGATTTGATTACATCGAAA+TGG - chr4.1:75380911-75380930 MS.gene87551:intron 30.0%
GCATCTAGTAATTTGAAAAG+GGG - chr4.1:75382844-75382863 MS.gene87551:intron 30.0%
GGATTTACTCTTTGATGTAA+TGG - chr4.1:75380179-75380198 MS.gene87551:intron 30.0%
GTTAGTTACAAGTTAGTTAG+TGG - chr4.1:75383172-75383191 MS.gene87551:intron 30.0%
TAAAAGACTAAGGCTCTATT+TGG - chr4.1:75382115-75382134 MS.gene87551:CDS 30.0%
TAAACACTTGTGAGAATATC+TGG + chr4.1:75383992-75384011 None:intergenic 30.0%
TAAAGAAGAGATTCAAACCT+GGG + chr4.1:75379415-75379434 None:intergenic 30.0%
TAAGAAGTGAATAATGTTGC+AGG - chr4.1:75384267-75384286 MS.gene87551:intron 30.0%
TACATCAAAGAGTAAATCCT+TGG + chr4.1:75380178-75380197 None:intergenic 30.0%
TCAATTTGGGTGTTAATATG+TGG - chr4.1:75380521-75380540 MS.gene87551:CDS 30.0%
TCCAACCAAACAATTTACAT+AGG + chr4.1:75379299-75379318 None:intergenic 30.0%
TGACTAATATAGTCTATCCT+TGG + chr4.1:75384547-75384566 None:intergenic 30.0%
TTCGATTATTAGCATGGAAT+AGG + chr4.1:75381718-75381737 None:intergenic 30.0%
! AAATTGTAGGTGTTGTAAGA+AGG + chr4.1:75379881-75379900 None:intergenic 30.0%
! AATTGACTTCTCGAAAACTT+TGG + chr4.1:75383523-75383542 None:intergenic 30.0%
! ATGTAGTTTTCTTCCTTTTG+GGG - chr4.1:75380236-75380255 MS.gene87551:intron 30.0%
! ATGTTGAGTTTCTGAGAATT+TGG + chr4.1:75383345-75383364 None:intergenic 30.0%
! ATTCCCTGTTTTGTCAATTT+GGG - chr4.1:75380508-75380527 MS.gene87551:CDS 30.0%
! CAACACCTACAATTTAGAAT+AGG - chr4.1:75379886-75379905 MS.gene87551:intron 30.0%
! CAATTTGTTCAAATTCTCCT+AGG + chr4.1:75384710-75384729 None:intergenic 30.0%
! CATGTAGTTTTCTTCCTTTT+GGG - chr4.1:75380235-75380254 MS.gene87551:intron 30.0%
! CATTGTTGGACAATTTTGAA+TGG - chr4.1:75384859-75384878 MS.gene87551:intron 30.0%
! CATTTTACTTGGATCTTGTT+TGG - chr4.1:75383818-75383837 MS.gene87551:intron 30.0%
! CTTATTAGAAAACTAGTCTG+AGG + chr4.1:75381065-75381084 None:intergenic 30.0%
! GCTAATATTGATTGTCATCA+TGG - chr4.1:75380111-75380130 MS.gene87551:intron 30.0%
! TAGTTTGTAACTATGTGTGT+CGG - chr4.1:75379704-75379723 MS.gene87551:intron 30.0%
! TGGATTGCTAAATTTTTCCT+TGG + chr4.1:75384350-75384369 None:intergenic 30.0%
! TTTCTGAGAATTTGGAGAAT+TGG + chr4.1:75383337-75383356 None:intergenic 30.0%
! TTTTATATGACGGTCTAGAT+TGG - chr4.1:75380432-75380451 MS.gene87551:intron 30.0%
!! AAAATGAAAGTACCTTGTAG+CGG + chr4.1:75380849-75380868 None:intergenic 30.0%
!! AAGTGAGATTCATGTTTTAG+AGG - chr4.1:75379817-75379836 MS.gene87551:intron 30.0%
!! CTCTTTTAAAGAGTAAAGTC+AGG + chr4.1:75384207-75384226 None:intergenic 30.0%
!! GCTATTTTCATAAGCTTTTC+TGG + chr4.1:75383933-75383952 None:intergenic 30.0%
!! TTAGTTGGTAGTGAATTATC+AGG + chr4.1:75380668-75380687 None:intergenic 30.0%
!!! ATAAACAAGAGCATTTTGAG+CGG + chr4.1:75382530-75382549 None:intergenic 30.0%
!!! GACATTTTGATTATGCAAAC+AGG - chr4.1:75381742-75381761 MS.gene87551:intron 30.0%
!!! TGATGCACATTTTTTTCTAC+AGG - chr4.1:75381339-75381358 MS.gene87551:intron 30.0%
AAAATTGTCCAACAATGACC+AGG + chr4.1:75384856-75384875 None:intergenic 35.0%
AAACTACATGGACATAAGTC+TGG + chr4.1:75380225-75380244 None:intergenic 35.0%
AAATCCGATATCCTTCATCA+TGG + chr4.1:75380968-75380987 None:intergenic 35.0%
AACACCCAAATTGACAAAAC+AGG + chr4.1:75380515-75380534 None:intergenic 35.0%
AACTACATGGACATAAGTCT+GGG + chr4.1:75380224-75380243 None:intergenic 35.0%
AAGGGAGGAATTAATCAAGA+AGG - chr4.1:75381195-75381214 MS.gene87551:intron 35.0%
AAGTGAAACAAAACGGATCA+TGG + chr4.1:75383732-75383751 None:intergenic 35.0%
AATATTGTGAAAGAGGTCCA+GGG - chr4.1:75383076-75383095 MS.gene87551:intron 35.0%
AATCAATCCAAACAAACCCT+TGG - chr4.1:75384034-75384053 MS.gene87551:intron 35.0%
AATCATGTGGAAAACTGCTA+CGG + chr4.1:75379204-75379223 None:intergenic 35.0%
AATGTGAAAAATGCAAAGGG+GGG + chr4.1:75382667-75382686 None:intergenic 35.0%
ACACCCAAATTGACAAAACA+GGG + chr4.1:75380514-75380533 None:intergenic 35.0%
AGTCAATTCCTAATGGTCAA+AGG - chr4.1:75383535-75383554 MS.gene87551:intron 35.0%
AGTTTGTAACTATGTGTGTC+GGG - chr4.1:75379705-75379724 MS.gene87551:intron 35.0%
ATATCTACGTAACACAGACA+TGG + chr4.1:75379641-75379660 None:intergenic 35.0%
ATTCATCTTCAAGAGCTTGA+GGG + chr4.1:75381401-75381420 None:intergenic 35.0%
ATTCTGACTTTAAATCGGGT+TGG - chr4.1:75380392-75380411 MS.gene87551:intron 35.0%
CAAACCGAATATTGTGAAAG+AGG - chr4.1:75383069-75383088 MS.gene87551:intron 35.0%
CAAATGGGTGGTTACATTAA+GGG - chr4.1:75382893-75382912 MS.gene87551:CDS 35.0%
CAAGCTCTTGAAGATGAATA+TGG - chr4.1:75381402-75381421 MS.gene87551:intron 35.0%
CATAAGACAGAACAAAAACC+TGG + chr4.1:75379255-75379274 None:intergenic 35.0%
CCAAAAGGAAGAAAACTACA+TGG + chr4.1:75380237-75380256 None:intergenic 35.0%
CGGTTTCATTTCCTTTCAAT+GGG + chr4.1:75381574-75381593 None:intergenic 35.0%
CTAAGAAATGGAGTTCTCAT+TGG - chr4.1:75383761-75383780 MS.gene87551:intron 35.0%
CTTGATTAATTCCTCCCTTT+AGG + chr4.1:75381194-75381213 None:intergenic 35.0%
CTTTATAGCACTCAAGGTTA+TGG - chr4.1:75381849-75381868 MS.gene87551:intron 35.0%
GAAGTATGCTTCAGAGAATT+CGG - chr4.1:75381786-75381805 MS.gene87551:intron 35.0%
GACTTTGTGCAAAATGTGAA+AGG + chr4.1:75380707-75380726 None:intergenic 35.0%
GAGTAACACTAAATTCTGCA+TGG - chr4.1:75382414-75382433 MS.gene87551:intron 35.0%
GATGGTTAATATCCCTGAAT+TGG - chr4.1:75380042-75380061 MS.gene87551:intron 35.0%
GCATCAACACTTCAGATTAA+AGG + chr4.1:75379754-75379773 None:intergenic 35.0%
GGTTCTTCAGATAGAATAGT+TGG - chr4.1:75380787-75380806 MS.gene87551:intron 35.0%
GTCAATTCCTAATGGTCAAA+GGG - chr4.1:75383536-75383555 MS.gene87551:intron 35.0%
GTTTAAACCAACGAAATCGT+AGG + chr4.1:75383563-75383582 None:intergenic 35.0%
GTTTACTACGTAAGATTCGA+TGG - chr4.1:75380024-75380043 MS.gene87551:intron 35.0%
TATTCATCTTCAAGAGCTTG+AGG + chr4.1:75381402-75381421 None:intergenic 35.0%
TCAAATGGGTGGTTACATTA+AGG - chr4.1:75382892-75382911 MS.gene87551:CDS 35.0%
TCGGTTTCATTTCCTTTCAA+TGG + chr4.1:75381575-75381594 None:intergenic 35.0%
TGAAAAGGGGGTTACATTTA+GGG - chr4.1:75382857-75382876 MS.gene87551:intron 35.0%
TGGAATGAAAAAGAGCCATA+AGG + chr4.1:75383317-75383336 None:intergenic 35.0%
TGGACCTCTTTCACAATATT+CGG + chr4.1:75383076-75383095 None:intergenic 35.0%
TGTCTGTGTTACGTAGATAT+TGG - chr4.1:75379641-75379660 MS.gene87551:intron 35.0%
TGTTAAATGCTTGAATCCCT+CGG + chr4.1:75380347-75380366 None:intergenic 35.0%
TTCAGATTCAGTCTCTTCAT+TGG + chr4.1:75380315-75380334 None:intergenic 35.0%
TTCGAGAAGTCAATTCCTAA+TGG - chr4.1:75383528-75383547 MS.gene87551:intron 35.0%
TTCTGACTTTAAATCGGGTT+GGG - chr4.1:75380393-75380412 MS.gene87551:intron 35.0%
TTGAAAAGGGGGTTACATTT+AGG - chr4.1:75382856-75382875 MS.gene87551:intron 35.0%
TTTCCACATGATTTCCTGTT+TGG - chr4.1:75379211-75379230 MS.gene87551:CDS 35.0%
TTTGTGTTTGTCAAGGTTCA+TGG - chr4.1:75383438-75383457 MS.gene87551:intron 35.0%
! AGATTTTCTCATCGACAACT+GGG + chr4.1:75384130-75384149 None:intergenic 35.0%
! ATCTAAACCAAGGGTTTGTT+TGG + chr4.1:75384044-75384063 None:intergenic 35.0%
! CCATGTAGTTTTCTTCCTTT+TGG - chr4.1:75380234-75380253 MS.gene87551:intron 35.0%
! CCCTTTGAAGATATAATAGG+TGG + chr4.1:75384570-75384589 None:intergenic 35.0%
! CTTATAGGTTTTCGATCTCT+TGG - chr4.1:75380992-75381011 MS.gene87551:intron 35.0%
! GACAATTTGTTCCGATTAGA+TGG - chr4.1:75379983-75380002 MS.gene87551:intron 35.0%
! GACAATTTTGAATGGAATGC+TGG - chr4.1:75384867-75384886 MS.gene87551:CDS 35.0%
! GATTCCCTGTTTTGTCAATT+TGG - chr4.1:75380507-75380526 MS.gene87551:CDS 35.0%
! GTGTATGTCGATTACAAGAA+TGG - chr4.1:75384912-75384931 MS.gene87551:CDS 35.0%
! TATCTGCTATTTGACAACAC+TGG + chr4.1:75384648-75384667 None:intergenic 35.0%
! TGGCCCTTTGAAGATATAAT+AGG + chr4.1:75384573-75384592 None:intergenic 35.0%
! TTCCTTTCTGAAGAAGTCTA+TGG + chr4.1:75384246-75384265 None:intergenic 35.0%
!! AGACTATTTTGGAGAGCTTA+AGG + chr4.1:75382292-75382311 None:intergenic 35.0%
!! CAAAGAAACTCGCTTTTAGT+TGG + chr4.1:75380683-75380702 None:intergenic 35.0%
!! CATTAGCTTGTGTGATTCTA+GGG - chr4.1:75381128-75381147 MS.gene87551:intron 35.0%
!! CTTGTATCAGCTCTAAGAAA+TGG - chr4.1:75383749-75383768 MS.gene87551:intron 35.0%
!! GTCTTGCTTTTATGTATGAC+TGG - chr4.1:75382486-75382505 MS.gene87551:intron 35.0%
!! TCATTAGCTTGTGTGATTCT+AGG - chr4.1:75381127-75381146 MS.gene87551:intron 35.0%
!! TTCTCTGTCCTCTTTTGATT+GGG + chr4.1:75382453-75382472 None:intergenic 35.0%
!!! TTTTCAGGTGGAAACCTAAA+GGG - chr4.1:75381177-75381196 MS.gene87551:intron 35.0%
!!! TTTTTCAGGTGGAAACCTAA+AGG - chr4.1:75381176-75381195 MS.gene87551:intron 35.0%
AAGCTATCTTGGAGAGCTTA+TGG - chr4.1:75382248-75382267 MS.gene87551:CDS 40.0%
AAGTGCAGTGTTGTCAATTG+CGG + chr4.1:75384740-75384759 None:intergenic 40.0%
AGCTATCTTGGAGAGCTTAT+GGG - chr4.1:75382249-75382268 MS.gene87551:CDS 40.0%
AGGACTACTAGAATACACCA+AGG - chr4.1:75384330-75384349 MS.gene87551:intron 40.0%
AGGTGGTGTGTAACTACATA+GGG + chr4.1:75381948-75381967 None:intergenic 40.0%
AGTAAATCCTTGGCCAAAGA+AGG + chr4.1:75380168-75380187 None:intergenic 40.0%
ATACTTTGCCTGGTCATTGT+TGG - chr4.1:75384845-75384864 MS.gene87551:intron 40.0%
ATCTTTGGATTTGGCAGGAA+TGG - chr4.1:75384807-75384826 MS.gene87551:intron 40.0%
ATGGTAAAGATGCAGCGTTA+GGG + chr4.1:75384433-75384452 None:intergenic 40.0%
CACCATAGACTTCTTCAGAA+AGG - chr4.1:75384241-75384260 MS.gene87551:intron 40.0%
CATGGAATAGGAAGAAGAAC+GGG + chr4.1:75381706-75381725 None:intergenic 40.0%
CCATTGCTTTATAGCACTCA+AGG - chr4.1:75381843-75381862 MS.gene87551:intron 40.0%
CCTTGAGTGCTATAAAGCAA+TGG + chr4.1:75381846-75381865 None:intergenic 40.0%
CTAATATGGGTCCCATTGAA+AGG - chr4.1:75381560-75381579 MS.gene87551:intron 40.0%
GAATATTGTGAAAGAGGTCC+AGG - chr4.1:75383075-75383094 MS.gene87551:intron 40.0%
GATGATATTGTTCACTCCTC+AGG - chr4.1:75380933-75380952 MS.gene87551:intron 40.0%
GCAGTTAGTTACTGCTTGTT+TGG + chr4.1:75382355-75382374 None:intergenic 40.0%
GCATGGAATAGGAAGAAGAA+CGG + chr4.1:75381707-75381726 None:intergenic 40.0%
GCCAGTAGATAACTCAGATA+AGG - chr4.1:75382325-75382344 MS.gene87551:CDS 40.0%
GCCTTATCTGAGTTATCTAC+TGG + chr4.1:75382329-75382348 None:intergenic 40.0%
GCTCTTGAAGATGAATATGG+TGG - chr4.1:75381405-75381424 MS.gene87551:intron 40.0%
GTAGTGAATTATCAGGAAGC+TGG + chr4.1:75380661-75380680 None:intergenic 40.0%
GTTCCAAACAGGAAATCATG+TGG + chr4.1:75379217-75379236 None:intergenic 40.0%
TAGCAGCAATGATTAAACCC+TGG + chr4.1:75383096-75383115 None:intergenic 40.0%
TCATGTGGTTGAGATCAATG+TGG - chr4.1:75379941-75379960 MS.gene87551:intron 40.0%
TCTAGTAGTCCTTGAATTCC+CGG + chr4.1:75384322-75384341 None:intergenic 40.0%
TGATTAGAGAGTTACTCACG+AGG + chr4.1:75381030-75381049 None:intergenic 40.0%
TGCTACTAGGCAAAGAATAC+AGG - chr4.1:75380588-75380607 MS.gene87551:CDS 40.0%
TGGCAAAGGACCAAGTATAT+GGG - chr4.1:75379370-75379389 MS.gene87551:intron 40.0%
TTACTCACGAGGTAGTAATC+TGG + chr4.1:75381019-75381038 None:intergenic 40.0%
TTGTTCCGATTAGATGGAGT+CGG - chr4.1:75379989-75380008 MS.gene87551:intron 40.0%
! AAACACGCGTGAGACTATTT+TGG + chr4.1:75382303-75382322 None:intergenic 40.0%
! ACCACAATGCAGACCTTTTA+CGG + chr4.1:75384950-75384969 None:intergenic 40.0%
! CAGACCTTTTACGGTATCTT+CGG + chr4.1:75384941-75384960 None:intergenic 40.0%
! CAGATTTTCTCATCGACAAC+TGG + chr4.1:75384131-75384150 None:intergenic 40.0%
! CTTCAGATTAAAGGTGTGCA+CGG + chr4.1:75379745-75379764 None:intergenic 40.0%
! CTTCTCTGTCCTCTTTTGAT+TGG + chr4.1:75382454-75382473 None:intergenic 40.0%
! TGGAATACATAGGAGAGTGT+AGG - chr4.1:75383002-75383021 MS.gene87551:intron 40.0%
! TTTGTTAGAGAGTGTGTTGC+TGG + chr4.1:75381508-75381527 None:intergenic 40.0%
!! ATGAGGTTGATGATGGCAAA+AGG - chr4.1:75384506-75384525 MS.gene87551:intron 40.0%
!! GTGAAGGTATCCCATATACT+TGG + chr4.1:75379383-75379402 None:intergenic 40.0%
!! TCCTCTTTTGATTGGGATAG+TGG + chr4.1:75382446-75382465 None:intergenic 40.0%
AAAGGGTCCTACGATTTCGT+TGG - chr4.1:75383553-75383572 MS.gene87551:intron 45.0%
AAATCCTTGGCCAAAGAAGG+CGG + chr4.1:75380165-75380184 None:intergenic 45.0%
AACAGCTTCTTCAGCTTACC+AGG - chr4.1:75379234-75379253 MS.gene87551:CDS 45.0%
AATAGTTGGCCGCAGTAATG+GGG - chr4.1:75380801-75380820 MS.gene87551:intron 45.0%
ACCGTAAAAGGTCTGCATTG+TGG - chr4.1:75384946-75384965 MS.gene87551:CDS 45.0%
AGAAGAGATTCAAACCTGGG+TGG + chr4.1:75379412-75379431 None:intergenic 45.0%
AGAATAGTTGGCCGCAGTAA+TGG - chr4.1:75380799-75380818 MS.gene87551:intron 45.0%
AGCACTCAAGGTTATGGAAG+TGG - chr4.1:75381855-75381874 MS.gene87551:intron 45.0%
AGTCTACAGGCAGAAGTTTC+AGG - chr4.1:75381995-75382014 MS.gene87551:intron 45.0%
ATACAAGCCATGCTGCTACT+AGG - chr4.1:75380575-75380594 MS.gene87551:CDS 45.0%
ATAGACATAGAGCCAGTCTG+AGG + chr4.1:75384296-75384315 None:intergenic 45.0%
ATTTGGCAGGAATGGAGTGA+GGG - chr4.1:75384815-75384834 MS.gene87551:intron 45.0%
CAGGTGGTGTGTAACTACAT+AGG + chr4.1:75381949-75381968 None:intergenic 45.0%
CATGGTAAAGATGCAGCGTT+AGG + chr4.1:75384434-75384453 None:intergenic 45.0%
CGACATACACAAGTCCAAAG+CGG + chr4.1:75384902-75384921 None:intergenic 45.0%
CTGAAGAAGCTGTTCCAAAC+AGG + chr4.1:75379228-75379247 None:intergenic 45.0%
CTGCAGCAGTAAAAGTCTAC+AGG - chr4.1:75381982-75382001 MS.gene87551:intron 45.0%
GAATAGTTGGCCGCAGTAAT+GGG - chr4.1:75380800-75380819 MS.gene87551:intron 45.0%
GACTCCGAAGATACCGTAAA+AGG - chr4.1:75384934-75384953 MS.gene87551:CDS 45.0%
GCAAAGGGGGGTTACATTAA+GGG + chr4.1:75382655-75382674 None:intergenic 45.0%
GCATGCTTCTCTATGAAGCA+CGG - chr4.1:75379512-75379531 MS.gene87551:intron 45.0%
GCCACTATCCCAATCAAAAG+AGG - chr4.1:75382442-75382461 MS.gene87551:intron 45.0%
GGGTTACATTAAGGGACAGA+GGG + chr4.1:75382647-75382666 None:intergenic 45.0%
GTAGCGGTGGTATGAATCAA+TGG + chr4.1:75380833-75380852 None:intergenic 45.0%
GTGGCAAAGGACCAAGTATA+TGG - chr4.1:75379369-75379388 MS.gene87551:intron 45.0%
GTGGCCATGATGAAGGATAT+CGG - chr4.1:75380961-75380980 MS.gene87551:intron 45.0%
TATGAAGCACGGACACATGT+TGG - chr4.1:75379523-75379542 MS.gene87551:CDS 45.0%
TATGAAGGAGCAGCACATGA+AGG - chr4.1:75379347-75379366 MS.gene87551:intron 45.0%
TCGGTGACAGAGTTAAGCAT+TGG - chr4.1:75381805-75381824 MS.gene87551:intron 45.0%
TCTCCATATGCACGTACCTT+TGG + chr4.1:75383788-75383807 None:intergenic 45.0%
TGAGATCAATGTGGACTCTG+TGG - chr4.1:75379950-75379969 MS.gene87551:intron 45.0%
TGATTCATACCACCGCTACA+AGG - chr4.1:75380834-75380853 MS.gene87551:intron 45.0%
TGCAAAGGGGGGTTACATTA+AGG + chr4.1:75382656-75382675 None:intergenic 45.0%
TGGAGTTCTCATTGGTCCAA+AGG - chr4.1:75383769-75383788 MS.gene87551:intron 45.0%
TGGGTGGTTACATTAAGGGA+CGG - chr4.1:75382897-75382916 MS.gene87551:CDS 45.0%
TGGTTACATTAAGGGACGGA+GGG - chr4.1:75382901-75382920 MS.gene87551:CDS 45.0%
TTCTTTGCCTAGTAGCAGCA+TGG + chr4.1:75380585-75380604 None:intergenic 45.0%
! ACCCATGAGATGCTCTAAGT+CGG - chr4.1:75381887-75381906 MS.gene87551:intron 45.0%
! ACCGACTTAGAGCATCTCAT+GGG + chr4.1:75381891-75381910 None:intergenic 45.0%
! AGCAACCGACTCCATCTAAT+CGG + chr4.1:75379997-75380016 None:intergenic 45.0%
! GGTCACTTGATGACAAACCA+AGG - chr4.1:75384527-75384546 MS.gene87551:intron 45.0%
!! AAACATTTGGCTTTCCACGC+AGG + chr4.1:75383621-75383640 None:intergenic 45.0%
!! ATGAAAGTACCTTGTAGCGG+TGG + chr4.1:75380846-75380865 None:intergenic 45.0%
!! GAAGTGTTGATGCTACACAG+CGG - chr4.1:75379761-75379780 MS.gene87551:CDS 45.0%
!! GGAATCGATGAGGTTGATGA+TGG - chr4.1:75384499-75384518 MS.gene87551:intron 45.0%
!! TACCGACTTAGAGCATCTCA+TGG + chr4.1:75381892-75381911 None:intergenic 45.0%
AATCTGAATTCCCTGCACCG+AGG - chr4.1:75380327-75380346 MS.gene87551:intron 50.0%
ACCTGGGTGGTTATGAGTGA+AGG + chr4.1:75379399-75379418 None:intergenic 50.0%
ACCTTCACTCATAACCACCC+AGG - chr4.1:75379395-75379414 MS.gene87551:intron 50.0%
ACGCTATGGCATTGTAGCCT+AGG - chr4.1:75384690-75384709 MS.gene87551:intron 50.0%
AGGAATGGAGTGAGGGTGAA+GGG - chr4.1:75384822-75384841 MS.gene87551:intron 50.0%
AGGACAGAGAAGCAACGTCT+CGG - chr4.1:75382462-75382481 MS.gene87551:intron 50.0%
AGTAGTCCTTGAATTCCCGG+TGG + chr4.1:75384319-75384338 None:intergenic 50.0%
ATCATGGCCACATCTTCCTG+AGG + chr4.1:75380952-75380971 None:intergenic 50.0%
ATCTGAATTCCCTGCACCGA+GGG - chr4.1:75380328-75380347 MS.gene87551:intron 50.0%
CAGCGTGAGAAAGAATCAGG+TGG + chr4.1:75381965-75381984 None:intergenic 50.0%
CGTAACACAGACATGGACAC+CGG + chr4.1:75379634-75379653 None:intergenic 50.0%
CGTAGGACCCTTTGACCATT+AGG + chr4.1:75383546-75383565 None:intergenic 50.0%
CTAAAGCGTAGCAGACGCTA+TGG - chr4.1:75384676-75384695 MS.gene87551:intron 50.0%
CTGCAGCGTGAGAAAGAATC+AGG + chr4.1:75381968-75381987 None:intergenic 50.0%
GATCAATGTGGACTCTGTGG+TGG - chr4.1:75379953-75379972 MS.gene87551:intron 50.0%
GATTAGATGGAGTCGGTTGC+TGG - chr4.1:75379996-75380015 MS.gene87551:intron 50.0%
GATTTGGCAGGAATGGAGTG+AGG - chr4.1:75384814-75384833 MS.gene87551:intron 50.0%
GGAAGATGTGGCCATGATGA+AGG - chr4.1:75380954-75380973 MS.gene87551:intron 50.0%
GGAAGGTTCGTAACCCCAAA+AGG + chr4.1:75380252-75380271 None:intergenic 50.0%
GGATATGTACCAGAGTGCAG+GGG + chr4.1:75383466-75383485 None:intergenic 50.0%
GGGATATGTACCAGAGTGCA+GGG + chr4.1:75383467-75383486 None:intergenic 50.0%
GGGCTCAGTACTAGAATCAC+CGG + chr4.1:75381928-75381947 None:intergenic 50.0%
GGGGTTACATTAAGGGACAG+AGG + chr4.1:75382648-75382667 None:intergenic 50.0%
GTCTATCCACCGGGAATTCA+AGG - chr4.1:75384310-75384329 MS.gene87551:intron 50.0%
GTGGTTACATTAAGGGACGG+AGG - chr4.1:75382900-75382919 MS.gene87551:CDS 50.0%
GTTCACTCCTCAGGAAGATG+TGG - chr4.1:75380942-75380961 MS.gene87551:intron 50.0%
TCAGGTGGAAACCTAAAGGG+AGG - chr4.1:75381180-75381199 MS.gene87551:intron 50.0%
TCCACGCAGGCAAGGAATAT+TGG + chr4.1:75383608-75383627 None:intergenic 50.0%
TCGGTAGCTAACTGCAATGC+CGG - chr4.1:75381906-75381925 MS.gene87551:intron 50.0%
TGGCAACATCCCCATTACTG+CGG + chr4.1:75380813-75380832 None:intergenic 50.0%
! ATCGGTGTCTGTGTTGTGTC+CGG - chr4.1:75379612-75379631 MS.gene87551:intron 50.0%
! GACTTAGAGCATCTCATGGG+TGG + chr4.1:75381888-75381907 None:intergenic 50.0%
! GGTCCAAAGGTACGTGCATA+TGG - chr4.1:75383782-75383801 MS.gene87551:intron 50.0%
! TGGCTCTATGTCTATCCACC+GGG - chr4.1:75384301-75384320 MS.gene87551:intron 50.0%
!! CTGGCTCTATGTCTATCCAC+CGG - chr4.1:75384300-75384319 MS.gene87551:intron 50.0%
AGATGGAGTCGGTTGCTGGT+AGG - chr4.1:75380000-75380019 MS.gene87551:intron 55.0%
ATGGAGTCGGTTGCTGGTAG+GGG - chr4.1:75380002-75380021 MS.gene87551:intron 55.0%
CAGGAATGGAGTGAGGGTGA+AGG - chr4.1:75384821-75384840 MS.gene87551:intron 55.0%
CGGGATATGTACCAGAGTGC+AGG + chr4.1:75383468-75383487 None:intergenic 55.0%
GAAGGAGCAGCACATGAAGG+TGG - chr4.1:75379350-75379369 MS.gene87551:intron 55.0%
GACAGAGAAGCAACGTCTCG+GGG - chr4.1:75382464-75382483 MS.gene87551:intron 55.0%
GATGGAGTCGGTTGCTGGTA+GGG - chr4.1:75380001-75380020 MS.gene87551:intron 55.0%
GCAGCACATGAAGGTGGCAA+AGG - chr4.1:75379356-75379375 MS.gene87551:intron 55.0%
GCCAATATTCCTTGCCTGCG+TGG - chr4.1:75383604-75383623 MS.gene87551:intron 55.0%
GGACAGAGAAGCAACGTCTC+GGG - chr4.1:75382463-75382482 MS.gene87551:intron 55.0%
GGGTGAAGGGATACTTTGCC+TGG - chr4.1:75384835-75384854 MS.gene87551:intron 55.0%
TTCATGGAACCCCTGCACTC+TGG - chr4.1:75383454-75383473 MS.gene87551:intron 55.0%
! ATGCTTGAATCCCTCGGTGC+AGG + chr4.1:75380341-75380360 None:intergenic 55.0%
! TGCTTGAATCCCTCGGTGCA+GGG + chr4.1:75380340-75380359 None:intergenic 55.0%
!! TTTGGCTTTCCACGCAGGCA+AGG + chr4.1:75383616-75383635 None:intergenic 55.0%
GCTGGCTACACACTCCGCTT+TGG - chr4.1:75384885-75384904 MS.gene87551:CDS 60.0%
TCCTTGGCCAAAGAAGGCGG+AGG + chr4.1:75380162-75380181 None:intergenic 60.0%
TGAGCAGCCTCCGCCTTCTT+TGG - chr4.1:75380152-75380171 MS.gene87551:intron 60.0%
TGTTGCAGGCTGCCTCAGAC+TGG - chr4.1:75384281-75384300 MS.gene87551:intron 60.0%
GCCTCCGCCTTCTTTGGCCA+AGG - chr4.1:75380158-75380177 MS.gene87551:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 75379127 75384992 75379127 ID=MS.gene87551
chr4.1 mRNA 75379127 75384992 75379127 ID=MS.gene87551.t1;Parent=MS.gene87551
chr4.1 exon 75384864 75384992 75384864 ID=MS.gene87551.t1.exon1;Parent=MS.gene87551.t1
chr4.1 CDS 75384864 75384992 75384864 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75384703 75384772 75384703 ID=MS.gene87551.t1.exon2;Parent=MS.gene87551.t1
chr4.1 CDS 75384703 75384772 75384703 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75383264 75383322 75383264 ID=MS.gene87551.t1.exon3;Parent=MS.gene87551.t1
chr4.1 CDS 75383264 75383322 75383264 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75383089 75383164 75383089 ID=MS.gene87551.t1.exon4;Parent=MS.gene87551.t1
chr4.1 CDS 75383089 75383164 75383089 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75382858 75382935 75382858 ID=MS.gene87551.t1.exon5;Parent=MS.gene87551.t1
chr4.1 CDS 75382858 75382935 75382858 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75382671 75382758 75382671 ID=MS.gene87551.t1.exon6;Parent=MS.gene87551.t1
chr4.1 CDS 75382671 75382758 75382671 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75382103 75382355 75382103 ID=MS.gene87551.t1.exon7;Parent=MS.gene87551.t1
chr4.1 CDS 75382103 75382355 75382103 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75381612 75381727 75381612 ID=MS.gene87551.t1.exon8;Parent=MS.gene87551.t1
chr4.1 CDS 75381612 75381727 75381612 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75380452 75380666 75380452 ID=MS.gene87551.t1.exon9;Parent=MS.gene87551.t1
chr4.1 CDS 75380452 75380666 75380452 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75380329 75380360 75380329 ID=MS.gene87551.t1.exon10;Parent=MS.gene87551.t1
chr4.1 CDS 75380329 75380360 75380329 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75379728 75379830 75379728 ID=MS.gene87551.t1.exon11;Parent=MS.gene87551.t1
chr4.1 CDS 75379728 75379830 75379728 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75379523 75379619 75379523 ID=MS.gene87551.t1.exon12;Parent=MS.gene87551.t1
chr4.1 CDS 75379523 75379619 75379523 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
chr4.1 exon 75379127 75379295 75379127 ID=MS.gene87551.t1.exon13;Parent=MS.gene87551.t1
chr4.1 CDS 75379127 75379295 75379127 ID=cds.MS.gene87551.t1;Parent=MS.gene87551.t1
Gene Sequence

>MS.gene87551

ATGTCGGTTAAGGTTGTTCTTCTTCTCCTTGCAACAATTTTCTTTTCTCTTTTTAACTCAGCAGTTTCTCTTAACCGTAGCAGTTTTCCACATGATTTCCTGTTTGGAACAGCTTCTTCAGCTTACCAGGTTTTTGTTCTGTCTTATGTTGTTTTTTTTATTGCATCTACCTATGTAAATTGTTTGGTTGGATCTTACTTGTTTTTTTTGTTATATGAAGTATGAAGGAGCAGCACATGAAGGTGGCAAAGGACCAAGTATATGGGATACCTTCACTCATAACCACCCAGGTTTGAATCTCTTCTTTATTTCTAATTTCTTTTTTTGCATCTAACTATACCTTTTTTTTAATGTTTTTTGTGTTTATGTTTTAAGTAGTCATTTAGCATGCTTCTCTATGAAGCACGGACACATGTTGGTGTTCGACACTGACATGACACCGACACCTATAATTATACTGAATCATGTCATTTTCTCAACTTATTATCGGTGTCTGTGTTGTGTCCGGTGTCCATGTCTGTGTTACGTAGATATTGGACACAACATTGACATCGATAATAATTTAATAAATGAAAAATAGTTTGTAACTATGTGTGTCGGGTGTCTGATTGAACACCGTGCACACCTTTAATCTGAAGTGTTGATGCTACACAGCGGTTCTTACTTAGCTTCTATTGAAGTAATAGTTTTAAGTGAGATTCATGTTTTAGAGGATATGTTTTGCTAATTGTTACTAGTTACTACTATTGAACCTTCTTACAACACCTACAATTTAGAATAGGGCTATAATGGGTAAATTAAAATAATAAGGTGATCATGTGGTTGAGATCAATGTGGACTCTGTGGTGGTTGTTGAGACAATTTGTTCCGATTAGATGGAGTCGGTTGCTGGTAGGGGTTTACTACGTAAGATTCGATGGTTAATATCCCTGAATTGGAATATTAAAGTTAGTTACACTTGGAATAAAATTCTTGTGCAGACTTGCTAATATTGATTGTCATCATGGAAATCACTTGATTGTTTATGAGCAGCCTCCGCCTTCTTTGGCCAAGGATTTACTCTTTGATGTAATGGGAGTTACGACTTGTCAACTCCCAGACTTATGTCCATGTAGTTTTCTTCCTTTTGGGGTTACGAACCTTCCCTTAGAAATTAAAGATATTGAAAAGATTTTAATTGGGTTGCCAATGAAGAGACTGAATCTGAATTCCCTGCACCGAGGGATTCAAGCATTTAACACAATTACACGATCTAAACGATCTATATTCTGACTTTAAATCGGGTTGGGATGTGAGTAATCCAATTTTTATATGACGGTCTAGATTGGCTATTGTGCGATTGTGTGAATGCATAAAATCCAAATTTGGATTAACTTCAATGATTCCCTGTTTTGTCAATTTGGGTGTTAATATGTGGAAAGCTAGTACCAAGATTATATATGTCAACAATACAAGCCATGCTGCTACTAGGCAAAGAATACAGGATTTGAATTAAGTCAGTTAATAACTGATAGAAAAGAAAAGCTATGTACCAGCTTCCTGATAATTCACTACCAACTAAAAGCGAGTTTCTTTGTCCTTTCACATTTTGCACAAAGTCTCTGTACAACTGTGCTTAAATTTTAATAAAAAAAACTTATAAATATTGTGACATTTTCTTGGTTCTTCAGATAGAATAGTTGGCCGCAGTAATGGGGATGTTGCCATTGATTCATACCACCGCTACAAGGTACTTTCATTTTCTTAATTCAAGTTTATAGCTTTTGATAAATTTCACTACTGTCGAGATTTGATTACATCGAAATGGATGATATTGTTCACTCCTCAGGAAGATGTGGCCATGATGAAGGATATCGGATTTAATGCTTATAGGTTTTCGATCTCTTGGTCCAGATTACTACCTCGTGAGTAACTCTCTAATCATCTTTTACTTATCCTCAGACTAGTTTTCTAATAAGTAGCTATTTATTGTTTTATGTATGATAAATTGCTAATTTGGATCATTAGCTTGTGTGATTCTAGGGTAACTATTAAGCTTAACTATATTGTTTTTTCAGGTGGAAACCTAAAGGGAGGAATTAATCAAGAAGGCGTCATATATTACAACAACCTCATAAATGAATTGATATCAAGTGGTAAGTAAAACTTCATTCTCACTTTCTCTTTTTATTTTTTCTCATGATACCTTAAAATAAACTAGTATATTTGATTTTGATGCACATTTTTTTCTACAGGACAAACACCATTTATAACTCTATTTCACTCTGATCTCCCTCAAGCTCTTGAAGATGAATATGGTGGTTTTTTGAGTCCCAAAATTGAGTAAGTAATTGTAAAACTTTACAACGTTGTGTAACAAAGAGACAAACTTGTTCTTGCCAGCAACACACTCTCTAACAAAGTTTTCAACAGTTTCTTAATAATTAGTTGCAACTAATATGGGTCCCATTGAAAGGAAATGAAACCGACATAAATTAGTTTGAACCGCATGAATTTCGATCAATAATAGATAGAATGTTAAGAAAATAATCAACAAAAAAAAAATGTTAAGAAAATAGGACAAAGAATGTTGCTAGCCCGTTCTTCTTCCTATTCCATGCTAATAATCGAAAATTGACATTTTGATTATGCAAACAGGCAAGATTTTGCTGATTATGCAGAAGTATGCTTCAGAGAATTCGGTGACAGAGTTAAGCATTGGATTACATTGAATGAGCCATTGCTTTATAGCACTCAAGGTTATGGAAGTGGATCATCTCCACCCATGAGATGCTCTAAGTCGGTAGCTAACTGCAATGCCGGTGATTCTAGTACTGAGCCCTATGTAGTTACACACCACCTGATTCTTTCTCACGCTGCAGCAGTAAAAGTCTACAGGCAGAAGTTTCAGGTTGCTGTATAATTATTATCATTTTTGTCAAATCCAACAGCATATAGAAATACAAATTAATTACAATTTAGGACTTAAATCATGGAATATGTTGTTAGTAAAAGACTAAGGCTCTATTTGGATAAACAACTTAATTAAGCGCTTATTATATAAGTGTTTATCTATAAGTTGTCTTTATAATTTTTTAAAATCAAGCAAAAGTGTTTTATATTAGCTAGAAATTGTTTTCATAAGCTATCTTGGAGAGCTTATGGGCATGTCATAAGTTGTTTCCTTAAGCTCTCCAAAATAGTCTCACGCGTGTTTATGCCAGTAGATAACTCAGATAAGGCAATCCAAACAAGCAGTAACTAACTGCGAATGTGTCTATAACAGAATACTCAAAAGGGTCAAATTGGAGTAACACTAAATTCTGCATGGCTTGTGCCACTATCCCAATCAAAAGAGGACAGAGAAGCAACGTCTCGGGGTCTTGCTTTTATGTATGACTGGTAAGTGTCTTTTTCTTTTCCGCTCAAAATGCTCTTGTTTATCGTTCTGTTAGTTTTCATAATATTCATGTGTGGTTTTATTTTGAGATTAAACTAGAAGCTTCAATGAAATGTGTATTTATAACTTCATTATACTCCCTCTGTCCCTTAATGTAACCCCCCTTTGCATTTTTCACATTTCTTAAGAAAAGTTGTCAGTGTGATTAATATGTCTGTTTTGTGTATTAATATTACCAAATTGTCCTTTATTTGTATGTGTATTAAATTTGACTATTCATATTTCAAGACAAGTTAGTAGTATTAATTAGGGGTATGTTTAGGAAAAAAGTAATAAATGCATCTAGTAATTTGAAAAGGGGGTTACATTTAGGGACAAAAATAAAATCAAATGGGTGGTTACATTAAGGGACGGAGGGAGTAATTTTTAAAATCTTCCACTTCGTATAAATTGATTAAAAACTTAGAAGGTTGGTTTAATGTAAATTATATTAATGTGGAATACATAGGAGAGTGTAGGCTTTTAAAAAGATTACCTAGTGAAACATGATATGAGTTTGGATTCAAACCGAATATTGTGAAAGAGGTCCAGGGTTTAATCATTGCTGCTAACAAATTCTCTGTTAAGATTCATAGGATTTAGTGTGTTAATTAGGATTAGTTAATAGTTAGTTACAAGTTAGTTAGTGGAGTTTGAAGTTAGTTACACAATTGGTCAGTCCAATAAGTCCTATAAATATGGACTAGCATGTACTCATTTTGTATCTCTTGATCAAAATGTTTCTCTGTTAATCTTTTCTCAATTAAAGCCTTATGGCTCTTTTTCATTCCAATTCTCCAAATTCTCAGAAACTCAACATTCTCACTCCTCAAAAATGAATATTTCATTGTTTTCTAGTAATTTCCGGTACACAGTCATGTCTAACTAATCATTTTGTGTTTGTCAAGGTTCATGGAACCCCTGCACTCTGGTACATATCCCGCAGTAATAGTTAACAAAGTCAAGGAACGTTTGCCAAAGTTTTCGAGAAGTCAATTCCTAATGGTCAAAGGGTCCTACGATTTCGTTGGTTTAAACTATTACACTTCAACTTATGCAGCCAATATTCCTTGCCTGCGTGGAAAGCCAAATGTTTTTACAGACAATTGTGTTAGATTTACTAGTAAGTCTTTCTATATAAACCTTGTTCAACTTCTTATTGAATTTTCATCATACTTTTGATACCATGATCCGTTTTGTTTCACTTGTATCAGCTCTAAGAAATGGAGTTCTCATTGGTCCAAAGGTACGTGCATATGGAGATAAGTTGTTACATTTTACTTGGATCTTGTTTGGATAAGTGCTTAATTATAAACTATTTCTATTGTAAAAGACAAAATAAAGTAACTCTTTTTATATAAGCTATATGATTTTTCATAAGCTATCCAGAAAAGCTTATGAAAATAGCTTATGGACATATCATAAGTTGTTTTATTAAGCTCTCCCAGATATTCTCACAAGTGTTTATGTAAATAGATGAGTTCAAATAAATCAATCCAAACAAACCCTTGGTTTAGATTCTTTTAGTGTGCGAGAATGAAAAGTTATGAATAAAACTAAGGTAAAGAGCAAAGTAAGATATCCCAGTTGTCGATGAGAAAATCTGTTATACAAGTGCATATACTATCGATTGTTGATTCTTCTATCGACAGTTAAGATCCTGACTTTACTCTTTAAAAGAGCAGAACTTATTTCTCACCATAGACTTCTTCAGAAAGGAATTAAGAAGTGAATAATGTTGCAGGCTGCCTCAGACTGGCTCTATGTCTATCCACCGGGAATTCAAGGACTACTAGAATACACCAAGGAAAAATTTAGCAATCCAATTATTTACATAACAGAAAATGGTAAGATTATCTATGATGATCTCCTATATCATTTTTTTCCCTAACGCTGCATCTTTACCATGTTACAATACTTTGTTTGTTAGATTCTAATCATTCAAATATATGTAGGAATCGATGAGGTTGATGATGGCAAAAGGTCACTTGATGACAAACCAAGGATAGACTATATTAGTCACCACCTATTATATCTTCAAAGGGCCATAATGTGAGTTTAAAAGAAACAATTTATTTAATTGAAAGAATTTGCACTTAGCCAGTGTTGTCAAATAGCAGATATAATGACACTAAAGCGTAGCAGACGCTATGGCATTGTAGCCTAGGAGAATTTGAACAAATTGTTATTATCCGCAATTGACAACACTGCACTTACAATCTCTGTTTGTGTTTTAGACTCAACAATTAGAATCCTAATTAAATCTTTGGATTTGGCAGGAATGGAGTGAGGGTGAAGGGATACTTTGCCTGGTCATTGTTGGACAATTTTGAATGGAATGCTGGCTACACACTCCGCTTTGGACTTGTGTATGTCGATTACAAGAATGGACTCCGAAGATACCGTAAAAGGTCTGCATTGTGGTTCAAATTATTTCTCCGCAAATGA
Protein sequence

>MS.gene87551.t1

MSVKVVLLLLATIFFSLFNSAVSLNRSSFPHDFLFGTASSAYQYEGAAHEGGKGPSIWDTFTHNHPDRIVGRSNGDVAIDSYHRYKEDVAMMKDIGFNAYRFSISWSRLLPRGNLKGGINQEGVIYYNNLINELISSGQTPFITLFHSDLPQALEDEYGGFLSPKIEQDFADYAEVCFREFGDRVKHWITLNEPLLYSTQGYGSGSSPPMRCSKSVANCNAGDSSTEPYVVTHHLILSHAAAVKVYRQKFQNTQKGQIGVTLNSAWLVPLSQSKEDREATSRGLAFMYDWFMEPLHSGTYPAVIVNKVKERLPKFSRSQFLMVKGSYDFVGLNYYTSTYAANIPCLRGKPNVFTDNCVRFTTLRNGVLIGPKAASDWLYVYPPGIQGLLEYTKEKFSNPIIYITENGIDEVDDGKRSLDDKPRIDYISHHLLYLQRAIMNGVRVKGYFAWSLLDNFEWNAGYTLRFGLVYVDYKNGLRRYRKRSALWFKLFLRK