AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003904

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003904.t1 MTR_4g066590 95.411 523 20 2 1 523 1 519 0.0 1029
MS.gene003904.t1 MTR_4g066630 87.954 523 60 2 1 523 5 524 0.0 935
MS.gene003904.t1 MTR_4g066580 75.340 515 123 2 6 520 12 522 0.0 833
MS.gene003904.t1 MTR_4g066630 88.840 457 49 1 1 457 5 459 0.0 825
MS.gene003904.t1 MTR_3g028720 75.050 497 123 1 25 520 25 521 0.0 812
MS.gene003904.t1 MTR_4g067040 95.366 410 16 1 1 410 1 407 0.0 808
MS.gene003904.t1 MTR_4g067040 94.859 389 17 1 1 389 1 386 0.0 764
MS.gene003904.t1 MTR_4g066630 89.100 422 44 1 1 422 5 424 0.0 761
MS.gene003904.t1 MTR_2g098540 70.611 507 141 2 5 511 7 505 0.0 755
MS.gene003904.t1 MTR_2g098790 68.297 511 159 2 1 511 5 512 0.0 749
MS.gene003904.t1 MTR_2g098520 71.667 480 136 0 32 511 29 508 0.0 744
MS.gene003904.t1 MTR_6g078450 69.034 507 154 2 7 511 5 510 0.0 741
MS.gene003904.t1 MTR_4g066210 68.476 479 151 0 33 511 39 517 0.0 721
MS.gene003904.t1 MTR_2g098540 73.026 456 123 0 56 511 6 461 0.0 716
MS.gene003904.t1 MTR_3g028720 75.632 435 105 1 25 458 25 459 0.0 716
MS.gene003904.t1 MTR_4g066240 64.971 511 178 1 1 511 1 510 0.0 715
MS.gene003904.t1 MTR_6g078330 66.667 510 165 2 12 518 9 516 0.0 711
MS.gene003904.t1 MTR_4g066240 64.844 512 178 2 1 511 1 511 0.0 711
MS.gene003904.t1 MTR_4g066640 65.415 506 169 3 7 511 11 511 0.0 711
MS.gene003904.t1 MTR_6g078380 67.456 507 158 2 6 511 11 511 0.0 702
MS.gene003904.t1 MTR_5g071520 65.377 517 169 2 4 511 7 522 0.0 683
MS.gene003904.t1 MTR_4g066630 89.628 376 37 1 1 376 5 378 0.0 682
MS.gene003904.t1 MTR_4g066580 75.534 421 99 2 6 426 12 428 0.0 677
MS.gene003904.t1 MTR_6g078450 68.943 454 138 2 7 458 5 457 0.0 659
MS.gene003904.t1 MTR_3g028720 73.050 423 111 2 3 424 5 425 0.0 657
MS.gene003904.t1 MTR_4g066330 61.047 516 170 4 2 514 7 494 0.0 645
MS.gene003904.t1 MTR_4g066340 68.287 432 137 0 80 511 6 437 0.0 637
MS.gene003904.t1 MTR_3g026280 62.395 476 174 2 36 511 21 491 0.0 635
MS.gene003904.t1 MTR_4g066280 60.878 501 166 3 13 511 19 491 0.0 632
MS.gene003904.t1 MTR_4g023000 60.714 476 181 3 36 511 23 492 0.0 608
MS.gene003904.t1 MTR_6g078330 68.357 414 129 1 105 518 1 412 0.0 603
MS.gene003904.t1 MTR_3g028720 72.868 387 102 2 3 388 5 389 0.0 601
MS.gene003904.t1 MTR_4g066240 64.218 422 150 1 1 422 1 421 0.0 583
MS.gene003904.t1 MTR_4g015420 56.375 502 179 7 22 511 50 523 0.0 566
MS.gene003904.t1 MTR_6g078330 66.169 402 132 2 117 518 15 412 0.0 564
MS.gene003904.t1 MTR_2g043200 59.664 476 158 6 42 511 70 517 0.0 564
MS.gene003904.t1 MTR_3g026400 54.150 506 225 5 7 511 8 507 0.0 559
MS.gene003904.t1 MTR_3g026620 52.055 511 239 4 1 511 4 508 0.0 540
MS.gene003904.t1 MTR_4g015460 56.790 486 171 9 37 511 42 499 0.0 533
MS.gene003904.t1 MTR_4g066640 65.365 384 127 3 7 389 11 389 0.0 533
MS.gene003904.t1 MTR_4g083000 51.383 506 237 5 10 511 1 501 0.0 531
MS.gene003904.t1 MTR_6g078330 68.320 363 112 1 12 371 9 371 0.0 528
MS.gene003904.t1 MTR_3g026400 55.246 467 201 5 46 511 17 476 0.0 528
MS.gene003904.t1 MTR_5g044000 50.573 524 230 7 13 511 1 520 0.0 523
MS.gene003904.t1 MTR_4g081530 50.098 509 243 6 13 518 5 505 3.72e-170 491
MS.gene003904.t1 MTR_0110s0040 48.148 513 253 7 3 514 13 513 7.34e-169 488
MS.gene003904.t1 MTR_0110s0030 47.563 513 256 7 3 514 13 513 6.61e-168 485
MS.gene003904.t1 MTR_3g033790 48.548 482 233 6 37 517 19 486 1.72e-157 457
MS.gene003904.t1 MTR_3g033810 48.057 489 240 5 30 517 14 489 2.55e-157 457
MS.gene003904.t1 MTR_4g131810 48.233 481 232 5 42 513 33 505 2.80e-156 456
MS.gene003904.t1 MTR_2g022760 48.319 476 241 4 46 519 45 517 3.45e-152 445
MS.gene003904.t1 MTR_4g083000 52.068 411 189 4 105 511 1 407 4.05e-149 433
MS.gene003904.t1 MTR_2g079580 42.315 527 283 9 2 523 5 515 3.00e-147 433
MS.gene003904.t1 MTR_2g079550 44.919 492 258 7 37 523 30 513 1.00e-146 432
MS.gene003904.t1 MTR_4g131800 47.193 481 248 5 42 520 521 997 1.82e-146 446
MS.gene003904.t1 MTR_3g026400 57.423 357 147 4 7 362 8 360 6.45e-145 421
MS.gene003904.t1 MTR_4g016920 45.996 487 247 7 36 520 26 498 1.23e-143 423
MS.gene003904.t1 MTR_7g068910 45.607 478 244 6 36 511 30 493 4.44e-143 422
MS.gene003904.t1 MTR_7g033860 44.928 483 239 7 39 513 50 513 5.44e-142 419
MS.gene003904.t1 MTR_2g022710 43.133 517 284 8 4 518 5 513 3.21e-141 417
MS.gene003904.t1 MTR_7g068910 44.672 488 244 7 36 511 30 503 7.90e-140 414
MS.gene003904.t1 MTR_5g068740 44.118 510 249 10 10 511 7 488 1.30e-136 405
MS.gene003904.t1 MTR_1g088610 44.401 509 248 10 10 511 7 487 6.08e-136 408
MS.gene003904.t1 MTR_1g088610 35.345 116 68 2 397 511 503 612 5.67e-12 68.6
MS.gene003904.t1 MTR_0108s0030 42.650 483 240 5 39 517 5 454 6.99e-135 399
MS.gene003904.t1 MTR_0110s0040 48.608 395 193 5 3 395 13 399 2.71e-127 377
MS.gene003904.t1 MTR_7g051610 43.724 478 249 6 38 514 76 534 1.67e-126 380
MS.gene003904.t1 MTR_7g051510 42.116 482 257 5 38 517 76 537 2.53e-124 374
MS.gene003904.t1 MTR_2g022760 46.043 417 220 4 105 519 1 414 1.39e-122 366
MS.gene003904.t1 MTR_7g051650 42.348 477 254 6 38 512 76 533 2.00e-122 370
MS.gene003904.t1 MTR_2g079580 46.547 391 197 6 37 422 32 415 3.71e-122 365
MS.gene003904.t1 MTR_7g051650 41.807 476 254 5 38 512 76 529 2.49e-121 367
MS.gene003904.t1 MTR_7g068900 45.626 423 204 8 100 514 17 421 4.19e-119 359
MS.gene003904.t1 MTR_2g022710 42.013 457 257 6 4 458 5 455 1.56e-117 355
MS.gene003904.t1 MTR_2g022710 42.013 457 257 6 4 458 5 455 3.30e-117 354
MS.gene003904.t1 MTR_1g088630 44.060 463 207 11 56 511 14 431 1.09e-116 352
MS.gene003904.t1 MTR_4g016920 44.737 418 216 6 105 520 1 405 7.04e-116 349
MS.gene003904.t1 MTR_2g022710 43.230 421 231 6 4 422 5 419 2.42e-114 345
MS.gene003904.t1 MTR_2g022710 42.308 416 234 5 105 518 1 412 1.41e-112 340
MS.gene003904.t1 MTR_2g022710 42.787 409 226 6 4 410 5 407 5.26e-109 331
MS.gene003904.t1 MTR_7g056747 42.584 418 214 4 99 515 9 401 3.46e-105 321
MS.gene003904.t1 MTR_1g088630 50.621 322 123 6 39 356 29 318 1.04e-103 316
MS.gene003904.t1 MTR_2g022710 44.010 384 207 6 4 385 5 382 5.89e-103 316
MS.gene003904.t1 MTR_4g016920 53.558 267 121 2 105 370 1 265 7.61e-95 291
MS.gene003904.t1 MTR_1g088630 53.532 269 113 4 39 303 29 289 7.89e-94 288
MS.gene003904.t1 MTR_0110s0020 50.758 264 122 4 3 266 13 268 5.77e-91 281
MS.gene003904.t1 MTR_5g069350 43.860 171 55 5 351 511 48 187 1.27e-30 118
MS.gene003904.t1 MTR_4g122980 25.412 425 232 12 101 513 183 534 3.47e-28 119
MS.gene003904.t1 MTR_8g038650 40.152 132 66 2 237 358 24 152 2.76e-25 102
MS.gene003904.t1 MTR_8g038650 55.556 54 23 1 46 99 7 59 2.40e-13 68.6
MS.gene003904.t1 MTR_4g061170 80.488 41 6 1 460 498 24 64 3.92e-15 70.5
MS.gene003904.t1 MTR_7g028885 44.286 70 35 1 243 308 21 90 9.80e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003904.t1 AT5G44640 53.831 509 227 5 9 516 5 506 0.0 574
MS.gene003904.t1 AT5G42260 54.890 501 218 5 8 507 4 497 0.0 571
MS.gene003904.t1 AT2G44450 54.490 490 218 2 25 514 19 503 0.0 570
MS.gene003904.t1 AT2G44480 54.167 480 219 1 36 515 65 543 0.0 560
MS.gene003904.t1 AT2G44480 54.167 480 219 1 36 515 34 512 0.0 560
MS.gene003904.t1 AT3G60130 55.462 476 206 3 37 511 30 500 0.0 557
MS.gene003904.t1 AT2G25630 51.357 516 219 5 2 516 4 488 0.0 541
MS.gene003904.t1 AT5G24550 50.385 520 251 6 8 521 1 519 0.0 535
MS.gene003904.t1 AT5G24540 50.769 520 249 6 8 521 1 519 0.0 525
MS.gene003904.t1 AT3G60140 49.901 503 241 7 12 511 8 502 0.0 523
MS.gene003904.t1 AT1G51470 53.445 479 209 7 36 512 44 510 8.07e-179 513
MS.gene003904.t1 AT1G26560 52.075 482 221 6 37 513 32 508 1.21e-177 510
MS.gene003904.t1 AT1G47600 52.818 479 212 7 36 512 44 510 2.51e-176 506
MS.gene003904.t1 AT1G47600 52.818 479 211 7 36 512 44 509 8.39e-176 505
MS.gene003904.t1 AT3G60120 51.660 482 222 7 36 511 13 489 3.37e-174 502
MS.gene003904.t1 AT2G44460 47.893 522 257 6 1 519 3 512 2.70e-173 501
MS.gene003904.t1 AT3G18080 49.900 501 239 8 20 516 20 512 7.00e-172 495
MS.gene003904.t1 AT5G54570 49.691 485 227 4 36 511 29 505 3.83e-171 494
MS.gene003904.t1 AT2G44470 45.437 515 267 5 1 512 3 506 3.16e-170 494
MS.gene003904.t1 AT2G44490 49.688 481 236 5 36 511 13 492 8.20e-169 489
MS.gene003904.t1 AT5G25980 48.315 534 256 11 1 523 12 536 5.08e-167 484
MS.gene003904.t1 AT3G18070 49.385 488 227 9 32 516 25 495 3.21e-165 478
MS.gene003904.t1 AT3G18070 49.590 488 232 9 32 516 25 501 2.22e-164 476
MS.gene003904.t1 AT3G60130 54.106 414 184 3 99 511 40 448 2.61e-163 471
MS.gene003904.t1 AT2G44480 52.068 411 196 1 105 515 1 410 2.31e-162 467
MS.gene003904.t1 AT3G09260 48.333 480 241 6 37 512 35 511 1.13e-158 462
MS.gene003904.t1 AT5G26000 47.195 517 253 9 7 511 3 511 8.46e-158 460
MS.gene003904.t1 AT5G36890 49.275 483 230 5 38 517 17 487 1.80e-157 457
MS.gene003904.t1 AT5G36890 49.378 482 229 5 38 516 17 486 4.04e-157 457
MS.gene003904.t1 AT2G32860 45.436 482 260 3 36 514 93 574 6.35e-157 461
MS.gene003904.t1 AT3G60130 53.140 414 177 4 99 511 40 437 1.52e-156 454
MS.gene003904.t1 AT2G32860 45.228 482 260 4 36 514 93 573 2.92e-155 456
MS.gene003904.t1 AT3G03640 45.312 512 268 6 7 511 6 512 9.41e-155 452
MS.gene003904.t1 AT5G24540 49.670 455 223 5 8 457 1 454 8.06e-154 447
MS.gene003904.t1 AT1G52400 45.543 516 268 10 6 514 9 518 1.12e-153 449
MS.gene003904.t1 AT1G52400 45.543 516 268 10 6 514 9 518 1.12e-153 449
MS.gene003904.t1 AT1G75940 47.251 491 243 9 37 516 37 522 1.38e-153 449
MS.gene003904.t1 AT3G21370 46.584 483 248 8 36 511 32 511 1.84e-152 446
MS.gene003904.t1 AT5G28510 46.091 486 250 7 37 513 39 521 1.23e-149 439
MS.gene003904.t1 AT1G66280 46.032 504 258 9 16 511 13 510 1.88e-149 438
MS.gene003904.t1 AT5G54570 48.724 431 205 3 36 458 29 451 6.47e-148 432
MS.gene003904.t1 AT1G61820 47.023 487 250 7 29 511 22 504 9.65e-148 434
MS.gene003904.t1 AT2G44470 44.009 459 244 4 1 457 3 450 6.07e-147 429
MS.gene003904.t1 AT1G66270 46.473 482 246 8 37 512 36 511 7.41e-147 432
MS.gene003904.t1 AT5G25980 48.172 465 225 8 1 458 12 467 4.07e-146 428
MS.gene003904.t1 AT5G25980 48.172 465 225 8 1 458 12 467 4.07e-146 428
MS.gene003904.t1 AT1G02850 47.368 475 233 7 38 511 27 485 2.42e-145 427
MS.gene003904.t1 AT3G60140 48.910 413 201 6 12 422 8 412 4.37e-145 425
MS.gene003904.t1 AT1G66270 46.266 482 245 9 37 512 36 509 8.01e-144 424
MS.gene003904.t1 AT1G02850 45.382 498 232 8 38 511 27 508 3.08e-141 417
MS.gene003904.t1 AT4G21760 43.053 511 276 8 6 511 21 521 1.91e-140 416
MS.gene003904.t1 AT1G02850 45.491 499 231 9 38 511 27 509 1.10e-139 413
MS.gene003904.t1 AT5G54570 48.317 416 198 4 105 511 1 408 2.94e-138 407
MS.gene003904.t1 AT5G26000 46.320 462 230 7 7 458 3 456 3.45e-138 407
MS.gene003904.t1 AT1G60090 44.082 490 248 10 37 522 24 491 2.85e-137 407
MS.gene003904.t1 AT1G61810 45.267 486 257 8 42 522 38 519 6.17e-137 406
MS.gene003904.t1 AT2G44480 59.936 312 123 2 36 347 65 374 1.33e-136 401
MS.gene003904.t1 AT4G27830 42.460 504 263 8 11 511 5 484 2.46e-136 404
MS.gene003904.t1 AT1G02850 45.895 475 213 8 38 511 27 458 2.45e-135 400
MS.gene003904.t1 AT2G44450 51.821 357 167 2 158 514 1 352 1.72e-134 394
MS.gene003904.t1 AT4G21760 42.074 511 271 9 6 511 21 511 1.91e-133 398
MS.gene003904.t1 AT1G60090 42.800 500 247 11 37 522 24 498 3.96e-133 396
MS.gene003904.t1 AT4G22100 44.561 478 243 9 38 511 23 482 2.48e-132 394
MS.gene003904.t1 AT1G61810 46.204 461 240 7 42 498 38 494 2.86e-132 395
MS.gene003904.t1 AT3G62750 41.837 490 253 8 26 511 12 473 1.32e-128 384
MS.gene003904.t1 AT4G27820 43.750 480 247 7 36 511 22 482 1.83e-128 384
MS.gene003904.t1 AT1G52400 44.541 458 242 9 6 457 9 460 2.01e-128 382
MS.gene003904.t1 AT3G62750 42.324 482 246 8 34 511 46 499 4.08e-128 384
MS.gene003904.t1 AT1G45191 43.933 478 240 9 38 511 30 483 8.41e-128 382
MS.gene003904.t1 AT2G44470 43.704 405 215 4 1 403 3 396 2.06e-127 377
MS.gene003904.t1 AT1G45191 42.505 487 245 9 38 511 30 494 2.58e-124 374
MS.gene003904.t1 AT1G45191 42.678 478 252 9 38 511 30 489 9.91e-124 372
MS.gene003904.t1 AT1G45191 42.052 497 245 10 38 511 30 506 9.10e-123 370
MS.gene003904.t1 AT3G62740 41.372 481 257 10 34 511 20 478 1.25e-122 369
MS.gene003904.t1 AT5G48375 45.638 447 171 9 33 476 34 411 2.01e-121 363
MS.gene003904.t1 AT1G02850 46.814 408 184 6 38 422 27 424 6.55e-121 362
MS.gene003904.t1 AT3G18070 52.424 330 150 5 32 361 25 347 9.18e-119 355
MS.gene003904.t1 AT1G60270 48.837 344 165 5 37 377 24 359 3.24e-112 338
MS.gene003904.t1 AT2G44460 47.684 367 188 4 156 519 1 366 1.95e-111 338
MS.gene003904.t1 AT3G62750 41.324 438 226 7 26 460 38 447 4.98e-111 338
MS.gene003904.t1 AT1G61810 43.499 423 230 8 105 522 1 419 1.11e-109 333
MS.gene003904.t1 AT1G51490 49.288 351 163 7 44 392 27 364 4.99e-109 331
MS.gene003904.t1 AT1G61810 45.714 385 202 6 42 422 38 419 8.76e-109 331
MS.gene003904.t1 AT3G62740 41.784 426 224 9 34 457 20 423 2.87e-108 329
MS.gene003904.t1 AT1G45191 49.107 336 159 5 38 370 30 356 7.94e-107 325
MS.gene003904.t1 AT1G45191 49.107 336 159 5 38 370 30 356 9.28e-107 325
MS.gene003904.t1 AT4G27830 41.951 410 221 5 105 511 1 396 9.40e-107 325
MS.gene003904.t1 AT3G62750 46.246 333 163 4 26 358 12 328 4.70e-104 317
MS.gene003904.t1 AT3G62750 46.246 333 163 4 26 358 12 328 4.70e-104 317
MS.gene003904.t1 AT3G62750 46.246 333 163 4 26 358 38 354 3.32e-103 317
MS.gene003904.t1 AT2G44480 47.682 302 157 1 214 515 6 306 1.27e-100 306
MS.gene003904.t1 AT3G18070 47.289 332 166 6 188 516 99 424 3.29e-100 309
MS.gene003904.t1 AT3G18070 58.824 68 27 1 32 99 25 91 2.97e-18 87.4
MS.gene003904.t1 AT4G27820 42.336 411 219 6 105 511 1 397 1.40e-99 307
MS.gene003904.t1 AT4G27820 42.336 411 219 6 105 511 1 397 1.40e-99 307
MS.gene003904.t1 AT1G61820 44.932 365 194 6 151 511 4 365 1.52e-99 305
MS.gene003904.t1 AT3G62750 39.903 411 220 7 105 511 1 388 4.48e-97 300
MS.gene003904.t1 AT3G62750 39.903 411 220 7 105 511 1 388 4.48e-97 300
MS.gene003904.t1 AT3G18070 46.541 318 161 6 202 516 1 312 3.12e-93 287
MS.gene003904.t1 AT1G61810 52.453 265 124 2 42 306 38 300 9.39e-91 280
MS.gene003904.t1 AT1G60270 47.826 276 137 4 105 377 1 272 1.43e-82 259
MS.gene003904.t1 AT3G18070 44.672 244 131 3 183 424 94 335 1.12e-66 219
MS.gene003904.t1 AT3G18070 58.824 68 27 1 32 99 25 91 1.31e-18 87.8
MS.gene003904.t1 AT3G18070 44.196 224 121 3 202 423 1 222 6.63e-60 197
MS.gene003904.t1 AT5G16580 36.025 322 177 7 152 468 2 299 1.63e-48 170
MS.gene003904.t1 AT3G06510 24.829 439 253 14 100 513 159 545 1.09e-28 120
MS.gene003904.t1 AT3G06510 24.883 426 235 14 100 513 159 511 8.74e-28 117

Find 90 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTTAATTATAGGTTTA+TGG 0.116590 4.4:+39611773 MS.gene003904:intron
TTAATTTATATTACTGAAAA+TGG 0.152248 4.4:+39612328 MS.gene003904:CDS
TTTCCAGAAGGCTTCATATT+TGG 0.208844 4.4:+39610683 MS.gene003904:CDS
GAATCACCGCCGGTGCAATT+TGG 0.245604 4.4:-39611451 None:intergenic
CACCAGGTCGATGCTCTTCT+TGG 0.247168 4.4:+39611422 MS.gene003904:CDS
AATTGCACCGGCGGTGATTC+TGG 0.263758 4.4:+39611454 MS.gene003904:CDS
CAACAACCTCATTGATGAAT+TGG 0.285597 4.4:+39611087 MS.gene003904:CDS
TTTCACAGGTTGCTTCAAAT+TGG 0.288843 4.4:+39612239 MS.gene003904:intron
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4.4:+39610750 MS.gene003904:CDS
GAACTTTGCTTCAAAACATT+TGG 0.292593 4.4:+39611322 MS.gene003904:CDS
ATCACTTGAGGAATCACTTA+TGG 0.300722 4.4:+39612549 MS.gene003904:CDS
TGATAATGTGCAACTAAATA+AGG 0.310787 4.4:-39611484 None:intergenic
AAGGGTTATACCGTAAGATT+TGG 0.337309 4.4:+39612786 MS.gene003904:CDS
TTTCAGTAATATAAATTAAA+GGG 0.356229 4.4:-39612324 None:intergenic
AAACTGCAGAAAAGATTTCC+AGG 0.361097 4.4:+39611291 MS.gene003904:intron
TTGGATAATCTCCATTGCTT+AGG 0.366307 4.4:-39611800 None:intergenic
TGGATAATCTCCATTGCTTA+GGG 0.369513 4.4:-39611799 None:intergenic
AGATAACAAACTTGATATAA+AGG 0.370220 4.4:+39611615 MS.gene003904:CDS
AAGACAAGAAGAGAATAAAT+AGG 0.370429 4.4:-39610571 None:intergenic
GTGCCAAATATGAAGCCTTC+TGG 0.376589 4.4:-39610686 None:intergenic
CAAACTCTAGAAGATGAATA+TGG 0.381482 4.4:+39611160 MS.gene003904:CDS
AACACTGAATCACTGCAAAT+AGG 0.401235 4.4:+39610641 MS.gene003904:CDS
TATTCATCTTCTAGAGTTTG+AGG 0.401353 4.4:-39611157 None:intergenic
AGAGCTACAGACTTCATGTT+TGG 0.408860 4.4:+39611646 MS.gene003904:CDS
GTCTCTCAAAAGGGTGTGAT+AGG 0.412344 4.4:+39611556 MS.gene003904:CDS
AAAGTATCAAGTCTCTCAAA+AGG 0.412668 4.4:+39611546 MS.gene003904:CDS
ATACTTTGCATGGTCTTTGT+TGG 0.413214 4.4:+39612746 MS.gene003904:CDS
TGACTCGTATCATCGATATA+AGG 0.436112 4.4:+39610835 MS.gene003904:CDS
AGAAAGTCTCGAATTGCTCT+TGG 0.442143 4.4:-39612274 None:intergenic
ATTGATGAATTGGTGGCAAA+TGG 0.451177 4.4:+39611097 MS.gene003904:CDS
CAGGGCTGGTGTAAATGTAA+AGG 0.460153 4.4:+39612722 MS.gene003904:intron
AGAGAATCTGTAAGGTAGCT+AGG 0.466863 4.4:-39611969 None:intergenic
AAAAGATATCAAAAGCTCTC+AGG 0.470702 4.4:+39612840 MS.gene003904:CDS
AGGGCTGGTGTAAATGTAAA+GGG 0.484456 4.4:+39612723 MS.gene003904:intron
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4.4:+39610737 MS.gene003904:CDS
AACACTTACATTTAGACCAA+TGG 0.493905 4.4:-39612133 None:intergenic
TCATTTATTCTATCTTAATG+AGG 0.494555 4.4:+39612600 MS.gene003904:CDS
TGGGTATGCAAATGGTGAAA+TGG 0.498834 4.4:+39611399 MS.gene003904:CDS
AAAACATGCGAGCCTTGGTT+AGG 0.500945 4.4:+39611823 MS.gene003904:CDS
CCATGGACTTACAGTCAAGA+TGG 0.501018 4.4:+39611379 MS.gene003904:CDS
AGTTTACAAAAGAGCAATCA+AGG 0.505341 4.4:+39611859 MS.gene003904:CDS
AGCAAAGTTCTGCATAGTCC+TGG 0.506435 4.4:-39611309 None:intergenic
AGTCAAGATGGGTATGCAAA+TGG 0.507686 4.4:+39611391 MS.gene003904:CDS
AAAGGTCATTCCAAATCTTA+CGG 0.508922 4.4:-39612796 None:intergenic
CATCGATATAAGGAAGATGT+TGG 0.511755 4.4:+39610845 MS.gene003904:CDS
CAACCTCATTGATGAATTGG+TGG 0.519451 4.4:+39611090 MS.gene003904:CDS
TTCATCATTACTTTAACAGA+AGG 0.528077 4.4:+39610605 MS.gene003904:CDS
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4.4:+39610751 MS.gene003904:CDS
AACGAGAAAGAGAATCTGTA+AGG 0.533045 4.4:-39611977 None:intergenic
CTACAGACTTCATGTTTGGA+TGG 0.540670 4.4:+39611650 MS.gene003904:CDS
GTGAAGGTATCCCATATACT+TGG 0.548987 4.4:-39610761 None:intergenic
AAAATCAGTGATGGAAACAA+TGG 0.553564 4.4:+39610800 MS.gene003904:CDS
TTGGAGATAGAGTAAAACAT+TGG 0.559088 4.4:+39611341 MS.gene003904:CDS
TCTTCTGCATATCAGTATGA+AGG 0.560527 4.4:+39610713 MS.gene003904:CDS
AAGTATCAAGTCTCTCAAAA+GGG 0.564962 4.4:+39611547 MS.gene003904:CDS
ATCAAAAGCTCTCAGGATTG+TGG 0.567379 4.4:+39612847 MS.gene003904:CDS
AATAGAAAAGACTTTCCAGA+AGG 0.567822 4.4:+39610671 MS.gene003904:CDS
TTGAGGATATCTATGAGTGA+AGG 0.570387 4.4:-39610777 None:intergenic
GCAAATGGTGAAATGGCACC+AGG 0.576425 4.4:+39611406 MS.gene003904:CDS
CCATCTTGACTGTAAGTCCA+TGG 0.578921 4.4:-39611379 None:intergenic
TTGCCACCAATTCATCAATG+AGG 0.580311 4.4:-39611093 None:intergenic
TGGTTGAATCCAAATTGCAC+CGG 0.581033 4.4:+39611442 MS.gene003904:CDS
GTATCACTCACATGATGAGT+GGG 0.583322 4.4:-39611195 None:intergenic
TCAAGTTTGTTATCTGAGAG+TGG 0.587930 4.4:-39611607 None:intergenic
AATCATGAAGGATATGAACT+TGG 0.589040 4.4:+39610868 MS.gene003904:CDS
GGAAGATGTTGGAATCATGA+AGG 0.590169 4.4:+39610856 MS.gene003904:CDS
AACCAAGAAGAGCATCGACC+TGG 0.592148 4.4:-39611424 None:intergenic
GGATAACTTTGAATGAGCCA+TGG 0.594373 4.4:+39611362 MS.gene003904:CDS
TGATCCATCGTTATCACTTG+AGG 0.594621 4.4:+39612537 MS.gene003904:CDS
AGTGGAGGAATTAATCAAGA+AGG 0.596031 4.4:+39611052 MS.gene003904:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4.4:+39610731 MS.gene003904:CDS
CATGGACTTACAGTCAAGAT+GGG 0.597238 4.4:+39611380 MS.gene003904:CDS
TATGCAGATGGAAAACTAAG+TGG 0.598010 4.4:+39611034 MS.gene003904:intron
TTTATGGATCCCCTAAGCAA+TGG 0.602529 4.4:+39611789 MS.gene003904:CDS
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4.4:+39610728 MS.gene003904:CDS
GTGATTGCAGTTGAACGTGA+TGG 0.608566 4.4:+39612105 MS.gene003904:intron
TGTATCACTCACATGATGAG+TGG 0.613126 4.4:-39611196 None:intergenic
TTCCGTTCCAGAATCACCGC+CGG 0.613932 4.4:-39611461 None:intergenic
CACCGGCGGTGATTCTGGAA+CGG 0.616221 4.4:+39611459 MS.gene003904:CDS
GGATAATCTCCATTGCTTAG+GGG 0.619619 4.4:-39611798 None:intergenic
ATGTAAAGGGATACTTTGCA+TGG 0.626161 4.4:+39612736 MS.gene003904:CDS
TTGAATCCAAATTGCACCGG+CGG 0.626765 4.4:+39611445 MS.gene003904:CDS
GGTTTGCCATTGCTCAACTG+AGG 0.628802 4.4:-39611948 None:intergenic
GATGCACCTCAGTTGAGCAA+TGG 0.634368 4.4:+39611942 MS.gene003904:CDS
GCAGATGGAAAACTAAGTGG+AGG 0.645764 4.4:+39611037 MS.gene003904:intron
GGGTGTGATAGGTATAACAT+TGG 0.663042 4.4:+39611567 MS.gene003904:CDS
GAGCAATCAAGGCTAGTGAG+TGG 0.679451 4.4:+39611870 MS.gene003904:CDS
GATTCCTCAAGTGATAACGA+TGG 0.682607 4.4:-39612541 None:intergenic
ACTCTAGAAGATGAATATGG+CGG 0.692578 4.4:+39611163 MS.gene003904:CDS
TGGTAATCGTGACCTAACCA+AGG 0.710047 4.4:-39611835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATAAATTTAAATTAA+TGG + chr4.4:39612058-39612077 MS.gene003904:intron 0.0%
!! TTAATTTATATTACTGAAAA+TGG + chr4.4:39612328-39612347 MS.gene003904:CDS 10.0%
!! TTTATTTAATTATAGGTTTA+TGG + chr4.4:39611773-39611792 MS.gene003904:intron 10.0%
!! TTTCAGTAATATAAATTAAA+GGG - chr4.4:39612327-39612346 None:intergenic 10.0%
!!! CTCTTTTTTTATTTAATTAT+AGG + chr4.4:39611766-39611785 MS.gene003904:intron 10.0%
!!! TTTTCAGTAATATAAATTAA+AGG - chr4.4:39612328-39612347 None:intergenic 10.0%
!! AGATAAACATATAATTGATA+GGG - chr4.4:39610966-39610985 None:intergenic 15.0%
!! TAACTTAGTTTAAATATTTG+TGG + chr4.4:39611238-39611257 MS.gene003904:intron 15.0%
!!! AAATTGGTAATTAATGAATT+TGG + chr4.4:39612207-39612226 MS.gene003904:intron 15.0%
!!! TTTCTTTTAATCTAAATACA+GGG + chr4.4:39612704-39612723 MS.gene003904:intron 15.0%
!! ACCTTTGTAGATTATAAAAA+TGG + chr4.4:39612813-39612832 MS.gene003904:CDS 20.0%
!! AGATAACAAACTTGATATAA+AGG + chr4.4:39611615-39611634 MS.gene003904:CDS 20.0%
!! GAGATAAACATATAATTGAT+AGG - chr4.4:39610967-39610986 None:intergenic 20.0%
!! TCAATCAATAGATATAATGT+AGG - chr4.4:39612025-39612044 None:intergenic 20.0%
!! TCATTTATTCTATCTTAATG+AGG + chr4.4:39612600-39612619 MS.gene003904:CDS 20.0%
!!! ACCATTTTTATAATCTACAA+AGG - chr4.4:39612817-39612836 None:intergenic 20.0%
!!! ATTTGTAACACTTTTTCATT+GGG + chr4.4:39611129-39611148 MS.gene003904:CDS 20.0%
!!! CTTTCTTTTAATCTAAATAC+AGG + chr4.4:39612703-39612722 MS.gene003904:intron 20.0%
!!! TATTTGGTTTTTGTCTAAAT+TGG + chr4.4:39612191-39612210 MS.gene003904:intron 20.0%
!!! TTTTCATGTAAGAACATTTT+TGG + chr4.4:39611999-39612018 MS.gene003904:intron 20.0%
! AAGACAAGAAGAGAATAAAT+AGG - chr4.4:39610574-39610593 None:intergenic 25.0%
! ACTTCATTAATTTATGCAGA+TGG + chr4.4:39611022-39611041 MS.gene003904:intron 25.0%
! TAATCATCCAAATTAACACA+AGG + chr4.4:39611692-39611711 MS.gene003904:intron 25.0%
! TATATCTCCTTGTGTTAATT+TGG - chr4.4:39611702-39611721 None:intergenic 25.0%
! TTCATCATTACTTTAACAGA+AGG + chr4.4:39610605-39610624 MS.gene003904:CDS 25.0%
!! CATACAGATTTTCTATATCT+TGG + chr4.4:39610894-39610913 MS.gene003904:CDS 25.0%
!! TGATAATGTGCAACTAAATA+AGG - chr4.4:39611487-39611506 None:intergenic 25.0%
!!! AACTTTTTCATAATGTGTGT+AGG + chr4.4:39612499-39612518 MS.gene003904:intron 25.0%
!!! AGTGGTTCATTTGATTTTAT+TGG + chr4.4:39611888-39611907 MS.gene003904:CDS 25.0%
!!! CAATGAAAAAGTGTTACAAA+TGG - chr4.4:39611130-39611149 None:intergenic 25.0%
!!! CATTTGTAACACTTTTTCAT+TGG + chr4.4:39611128-39611147 MS.gene003904:CDS 25.0%
!!! TTTGGTTATTTTACTTTCAC+AGG + chr4.4:39612225-39612244 MS.gene003904:intron 25.0%
AAAAGATATCAAAAGCTCTC+AGG + chr4.4:39612840-39612859 MS.gene003904:CDS 30.0%
AAAGGTCATTCCAAATCTTA+CGG - chr4.4:39612799-39612818 None:intergenic 30.0%
AACACTTACATTTAGACCAA+TGG - chr4.4:39612136-39612155 None:intergenic 30.0%
AAGTATCAAGTCTCTCAAAA+GGG + chr4.4:39611547-39611566 MS.gene003904:CDS 30.0%
AATAGAAAAGACTTTCCAGA+AGG + chr4.4:39610671-39610690 MS.gene003904:CDS 30.0%
AATCATGAAGGATATGAACT+TGG + chr4.4:39610868-39610887 MS.gene003904:CDS 30.0%
AGTTTACAAAAGAGCAATCA+AGG + chr4.4:39611859-39611878 MS.gene003904:CDS 30.0%
GAACTTTGCTTCAAAACATT+TGG + chr4.4:39611322-39611341 MS.gene003904:CDS 30.0%
GCAATATCTCATCTGTTATT+TGG + chr4.4:39612175-39612194 MS.gene003904:intron 30.0%
GTCTATTTCACTTTCTTTCA+TGG + chr4.4:39612661-39612680 MS.gene003904:intron 30.0%
TATCCTCAAAAAATCAGTGA+TGG + chr4.4:39610791-39610810 MS.gene003904:CDS 30.0%
TCAATTGACTAGACATACTT+GGG - chr4.4:39610931-39610950 None:intergenic 30.0%
TGAGATATTGCAACATTTCA+TGG - chr4.4:39612166-39612185 None:intergenic 30.0%
TTCAATTGACTAGACATACT+TGG - chr4.4:39610932-39610951 None:intergenic 30.0%
TTGGAGATAGAGTAAAACAT+TGG + chr4.4:39611341-39611360 MS.gene003904:CDS 30.0%
! AAAATCAGTGATGGAAACAA+TGG + chr4.4:39610800-39610819 MS.gene003904:CDS 30.0%
! AAAGTATCAAGTCTCTCAAA+AGG + chr4.4:39611546-39611565 MS.gene003904:CDS 30.0%
! CAAACTCTAGAAGATGAATA+TGG + chr4.4:39611160-39611179 MS.gene003904:CDS 30.0%
! CTTTGTTGGACAATTTTGAA+TGG + chr4.4:39612760-39612779 MS.gene003904:CDS 30.0%
! GACAATTTTGAATGGCATAA+GGG + chr4.4:39612768-39612787 MS.gene003904:CDS 30.0%
! GATTGCTCTTTTGTAAACTT+TGG - chr4.4:39611858-39611877 None:intergenic 30.0%
! TTTTAATCTAAATACAGGGC+TGG + chr4.4:39612708-39612727 MS.gene003904:intron 30.0%
!! TATTCATCTTCTAGAGTTTG+AGG - chr4.4:39611160-39611179 None:intergenic 30.0%
!!! TTTCCATCACTGATTTTTTG+AGG - chr4.4:39610797-39610816 None:intergenic 30.0%
AAACTGCAGAAAAGATTTCC+AGG + chr4.4:39611291-39611310 MS.gene003904:intron 35.0%
AACACTGAATCACTGCAAAT+AGG + chr4.4:39610641-39610660 MS.gene003904:CDS 35.0%
AACGAGAAAGAGAATCTGTA+AGG - chr4.4:39611980-39611999 None:intergenic 35.0%
AAGGGTTATACCGTAAGATT+TGG + chr4.4:39612786-39612805 MS.gene003904:CDS 35.0%
AGTGGAGGAATTAATCAAGA+AGG + chr4.4:39611052-39611071 MS.gene003904:CDS 35.0%
ATACTTTGCATGGTCTTTGT+TGG + chr4.4:39612746-39612765 MS.gene003904:CDS 35.0%
ATCACTTGAGGAATCACTTA+TGG + chr4.4:39612549-39612568 MS.gene003904:CDS 35.0%
ATGTAAAGGGATACTTTGCA+TGG + chr4.4:39612736-39612755 MS.gene003904:CDS 35.0%
CAACAACCTCATTGATGAAT+TGG + chr4.4:39611087-39611106 MS.gene003904:CDS 35.0%
CATCGATATAAGGAAGATGT+TGG + chr4.4:39610845-39610864 MS.gene003904:CDS 35.0%
TATGCAGATGGAAAACTAAG+TGG + chr4.4:39611034-39611053 MS.gene003904:intron 35.0%
TCTTCTGCATATCAGTATGA+AGG + chr4.4:39610713-39610732 MS.gene003904:CDS 35.0%
TGACTCGTATCATCGATATA+AGG + chr4.4:39610835-39610854 MS.gene003904:CDS 35.0%
TGGATAATCTCCATTGCTTA+GGG - chr4.4:39611802-39611821 None:intergenic 35.0%
TTGAGGATATCTATGAGTGA+AGG - chr4.4:39610780-39610799 None:intergenic 35.0%
TTGGATAATCTCCATTGCTT+AGG - chr4.4:39611803-39611822 None:intergenic 35.0%
TTTCACAGGTTGCTTCAAAT+TGG + chr4.4:39612239-39612258 MS.gene003904:intron 35.0%
TTTCCAGAAGGCTTCATATT+TGG + chr4.4:39610683-39610702 MS.gene003904:CDS 35.0%
! ACTCTAGAAGATGAATATGG+CGG + chr4.4:39611163-39611182 MS.gene003904:CDS 35.0%
! ATTGATGAATTGGTGGCAAA+TGG + chr4.4:39611097-39611116 MS.gene003904:CDS 35.0%
! GGACAATTTTGAATGGCATA+AGG + chr4.4:39612767-39612786 MS.gene003904:CDS 35.0%
!! TCAAGTTTGTTATCTGAGAG+TGG - chr4.4:39611610-39611629 None:intergenic 35.0%
AGAAAGTCTCGAATTGCTCT+TGG - chr4.4:39612277-39612296 None:intergenic 40.0%
AGAGAATCTGTAAGGTAGCT+AGG - chr4.4:39611972-39611991 None:intergenic 40.0%
AGAGCTACAGACTTCATGTT+TGG + chr4.4:39611646-39611665 MS.gene003904:CDS 40.0%
AGTCAAGATGGGTATGCAAA+TGG + chr4.4:39611391-39611410 MS.gene003904:CDS 40.0%
ATCAAAAGCTCTCAGGATTG+TGG + chr4.4:39612847-39612866 MS.gene003904:CDS 40.0%
CAACCTCATTGATGAATTGG+TGG + chr4.4:39611090-39611109 MS.gene003904:CDS 40.0%
CATGGACTTACAGTCAAGAT+GGG + chr4.4:39611380-39611399 MS.gene003904:CDS 40.0%
CTACAGACTTCATGTTTGGA+TGG + chr4.4:39611650-39611669 MS.gene003904:CDS 40.0%
GGAAGATGTTGGAATCATGA+AGG + chr4.4:39610856-39610875 MS.gene003904:CDS 40.0%
GGATAACTTTGAATGAGCCA+TGG + chr4.4:39611362-39611381 MS.gene003904:CDS 40.0%
GGATAATCTCCATTGCTTAG+GGG - chr4.4:39611801-39611820 None:intergenic 40.0%
GGGTGTGATAGGTATAACAT+TGG + chr4.4:39611567-39611586 MS.gene003904:CDS 40.0%
GTATCACTCACATGATGAGT+GGG - chr4.4:39611198-39611217 None:intergenic 40.0%
TGATCCATCGTTATCACTTG+AGG + chr4.4:39612537-39612556 MS.gene003904:CDS 40.0%
TGGAAGAGGACCAAGTATAT+GGG + chr4.4:39610751-39610770 MS.gene003904:CDS 40.0%
TGGGTATGCAAATGGTGAAA+TGG + chr4.4:39611399-39611418 MS.gene003904:CDS 40.0%
TGGTTGAATCCAAATTGCAC+CGG + chr4.4:39611442-39611461 MS.gene003904:CDS 40.0%
TGTATCACTCACATGATGAG+TGG - chr4.4:39611199-39611218 None:intergenic 40.0%
TTGCCACCAATTCATCAATG+AGG - chr4.4:39611096-39611115 None:intergenic 40.0%
TTTATGGATCCCCTAAGCAA+TGG + chr4.4:39611789-39611808 MS.gene003904:CDS 40.0%
! AGGGCTGGTGTAAATGTAAA+GGG + chr4.4:39612723-39612742 MS.gene003904:intron 40.0%
! GAACGTGATGGAAAAACCAT+TGG + chr4.4:39612117-39612136 MS.gene003904:CDS 40.0%
! GATTCCTCAAGTGATAACGA+TGG - chr4.4:39612544-39612563 None:intergenic 40.0%
!! GTGAAGGTATCCCATATACT+TGG - chr4.4:39610764-39610783 None:intergenic 40.0%
AAAACATGCGAGCCTTGGTT+AGG + chr4.4:39611823-39611842 MS.gene003904:CDS 45.0%
AGCAAAGTTCTGCATAGTCC+TGG - chr4.4:39611312-39611331 None:intergenic 45.0%
CCATCTTGACTGTAAGTCCA+TGG - chr4.4:39611382-39611401 None:intergenic 45.0%
CCATGGACTTACAGTCAAGA+TGG + chr4.4:39611379-39611398 MS.gene003904:CDS 45.0%
GCAGATGGAAAACTAAGTGG+AGG + chr4.4:39611037-39611056 MS.gene003904:intron 45.0%
GTGATTGCAGTTGAACGTGA+TGG + chr4.4:39612105-39612124 MS.gene003904:intron 45.0%
GTGCCAAATATGAAGCCTTC+TGG - chr4.4:39610689-39610708 None:intergenic 45.0%
GTGGAAGAGGACCAAGTATA+TGG + chr4.4:39610750-39610769 MS.gene003904:CDS 45.0%
TCCAAAAAACATGCGAGCCT+TGG + chr4.4:39611818-39611837 MS.gene003904:CDS 45.0%
TGGTAATCGTGACCTAACCA+AGG - chr4.4:39611838-39611857 None:intergenic 45.0%
TTGAATCCAAATTGCACCGG+CGG + chr4.4:39611445-39611464 MS.gene003904:CDS 45.0%
! CAGGGCTGGTGTAAATGTAA+AGG + chr4.4:39612722-39612741 MS.gene003904:intron 45.0%
! GTCTCTCAAAAGGGTGTGAT+AGG + chr4.4:39611556-39611575 MS.gene003904:CDS 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG + chr4.4:39610728-39610747 MS.gene003904:CDS 45.0%
!!! ACCAAGGCTCGCATGTTTTT+TGG - chr4.4:39611822-39611841 None:intergenic 45.0%
!! TAATTAAAAATAATGAAATA+TGG - chr4.4:39610998-39611017 None:intergenic 5.0%
GAGCAATCAAGGCTAGTGAG+TGG + chr4.4:39611870-39611889 MS.gene003904:CDS 50.0%
GATGCACCTCAGTTGAGCAA+TGG + chr4.4:39611942-39611961 MS.gene003904:CDS 50.0%
GCAAATGGTGAAATGGCACC+AGG + chr4.4:39611406-39611425 MS.gene003904:CDS 50.0%
GGTTTGCCATTGCTCAACTG+AGG - chr4.4:39611951-39611970 None:intergenic 50.0%
!! AACCAAGAAGAGCATCGACC+TGG - chr4.4:39611427-39611446 None:intergenic 50.0%
CACCAGGTCGATGCTCTTCT+TGG + chr4.4:39611422-39611441 MS.gene003904:CDS 55.0%
GAATCACCGCCGGTGCAATT+TGG - chr4.4:39611454-39611473 None:intergenic 55.0%
GCAGCAAGTGAAGGTGGAAG+AGG + chr4.4:39610737-39610756 MS.gene003904:CDS 55.0%
TTCCGTTCCAGAATCACCGC+CGG - chr4.4:39611464-39611483 None:intergenic 55.0%
! AATTGCACCGGCGGTGATTC+TGG + chr4.4:39611454-39611473 MS.gene003904:CDS 55.0%
! GAAGGTGCAGCAAGTGAAGG+TGG + chr4.4:39610731-39610750 MS.gene003904:CDS 55.0%
! CACCGGCGGTGATTCTGGAA+CGG + chr4.4:39611459-39611478 MS.gene003904:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 39610560 39612923 39610560 ID=MS.gene003904
chr4.4 mRNA 39610560 39612923 39610560 ID=MS.gene003904.t1;Parent=MS.gene003904
chr4.4 exon 39610560 39610932 39610560 ID=MS.gene003904.t1.exon1;Parent=MS.gene003904.t1
chr4.4 CDS 39610560 39610932 39610560 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39611041 39611206 39611041 ID=MS.gene003904.t1.exon2;Parent=MS.gene003904.t1
chr4.4 CDS 39611041 39611206 39611041 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39611300 39611671 39611300 ID=MS.gene003904.t1.exon3;Parent=MS.gene003904.t1
chr4.4 CDS 39611300 39611671 39611300 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39611788 39612005 39611788 ID=MS.gene003904.t1.exon4;Parent=MS.gene003904.t1
chr4.4 CDS 39611788 39612005 39611788 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39612115 39612146 39612115 ID=MS.gene003904.t1.exon5;Parent=MS.gene003904.t1
chr4.4 CDS 39612115 39612146 39612115 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39612247 39612349 39612247 ID=MS.gene003904.t1.exon6;Parent=MS.gene003904.t1
chr4.4 CDS 39612247 39612349 39612247 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39612521 39612629 39612521 ID=MS.gene003904.t1.exon7;Parent=MS.gene003904.t1
chr4.4 CDS 39612521 39612629 39612521 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
chr4.4 exon 39612725 39612923 39612725 ID=MS.gene003904.t1.exon8;Parent=MS.gene003904.t1
chr4.4 CDS 39612725 39612923 39612725 ID=cds.MS.gene003904.t1;Parent=MS.gene003904.t1
Gene Sequence

>MS.gene003904

ATGAGATATTTCCTATTTATTCTCTTCTTGTCTTTAGTTTCAACATTCATCATTACTTTAACAGAAGGTCAAGAAATAATTAACACTGAATCACTGCAAATAGGTTCATTGAATAGAAAAGACTTTCCAGAAGGCTTCATATTTGGCACAGCATCTTCTGCATATCAGTATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACCTTCACTCATAGATATCCTCAAAAAATCAGTGATGGAAACAATGGAGACGTTGCAGTTGACTCGTATCATCGATATAAGGAAGATGTTGGAATCATGAAGGATATGAACTTGGATGCATACAGATTTTCTATATCTTGGTCTAGAATACTCCCAAGTATGTCTAGTCAATTGAATTTATACTAATCCCTATCAATTATATGTTTATCTCTTTATAAACCATATTTCATTATTTTTAATTACTTAACTTCATTAATTTATGCAGATGGAAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATTGATGAATTGGTGGCAAATGGATTACAACCATTTGTAACACTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGCCCACTCATCATGTGAGTGATACAATTTCAAACTTTCAGTTAATAACTTAGTTTAAATATTTGTGGAAATGTTTCTCATTCATCTTCACATACTTTAAACTGCAGAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAATGAGCCATGGACTTACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGCTCTTCTTGGTTGAATCCAAATTGCACCGGCGGTGATTCTGGAACGGAACCTTATTTAGTTGCACATTATCAACTTCTAGCTCATGCAGCAGTTGTTAATTTATACAAGACAAAGTATCAAGTCTCTCAAAAGGGTGTGATAGGTATAACATTGGTCATAAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAAAGAGCTACAGACTTCATGTTTGGATGGTAAGTTGATTACAAAGATATAATCATCCAAATTAACACAAGGAGATATATATATATATATATATATATATATATATATATATGATAACTTATTCTCTTTTTTTATTTAATTATAGGTTTATGGATCCCCTAAGCAATGGAGATTATCCAAAAAACATGCGAGCCTTGGTTAGGTCACGATTACCAAAGTTTACAAAAGAGCAATCAAGGCTAGTGAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCTTGCTATGCTTCTGATGCACCTCAGTTGAGCAATGGCAAACCTAGCTACCTTACAGATTCTCTTTCTCGTTTTTCATGTAAGAACATTTTTGGCCTACATTATATCTATTGATTGATTATTTAAGTTATATATTATAAATTTAAATTAATGGTATATTTTTTTTTTTTTTTTTTGTGTGATTGCAGTTGAACGTGATGGAAAAACCATTGGTCTAAATGTAAGTGTTAAATTAACCATGAAATGTTGCAATATCTCATCTGTTATTTGGTTTTTGTCTAAATTGGTAATTAATGAATTTGGTTATTTTACTTTCACAGGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTGATACAAGTTAAAGAAAAATACAACGACCCTTTAATTTATATTACTGAAAATGGTAAGCAAATCACTTTCATATCATGCTTTTTCTTCTTTAAATAGATAAAGTTATAGTAAAAAACTTTTTACTTTAGCTTCTTAAAAAAAACATTTTACTCTAGATATATAAATTTCTATATGAAATTTTATTACTCATGAACATAACTCAACTTTTTCATAATGTGTGTAGGTATTAATGAGTACGATGATCCATCGTTATCACTTGAGGAATCACTTATGGATACGTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGTGAGTAAATTTTTGATATATCTAAAGATCAGTCTATTTCACTTTCTTTCATGGAATTTAGCTAAACTATTTTCTTTCTTTTAATCTAAATACAGGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTGGACAATTTTGAATGGCATAAGGGTTATACCGTAAGATTTGGAATGACCTTTGTAGATTATAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACATCAGAGAACAAAAAAGTTTACATAGACTCCATTTAA
Protein sequence

>MS.gene003904.t1

MRYFLFILFLSLVSTFIITLTEGQEIINTESLQIGSLNRKDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPNGKLSGGINQEGIDYYNNLIDELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVVNLYKTKYQVSQKGVIGITLVINYFVPLSDNKLDIKAAERATDFMFGWFMDPLSNGDYPKNMRALVRSRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNDPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSENKKVYIDSI