AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003914

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003914.t1 MTR_4g066280 94.867 487 24 1 1 487 1 486 0.0 937
MS.gene003914.t1 MTR_4g066330 88.912 487 53 1 1 487 1 486 0.0 909
MS.gene003914.t1 MTR_2g098540 64.615 520 145 5 1 494 1 507 0.0 686
MS.gene003914.t1 MTR_2g098790 64.087 504 152 3 10 487 7 507 0.0 677
MS.gene003914.t1 MTR_2g098520 65.918 490 135 4 24 487 20 503 0.0 672
MS.gene003914.t1 MTR_4g015420 67.647 476 139 7 23 487 47 518 0.0 653
MS.gene003914.t1 MTR_2g098540 67.896 461 119 3 60 494 6 463 0.0 647
MS.gene003914.t1 MTR_6g078330 62.846 506 157 5 8 487 6 506 0.0 641
MS.gene003914.t1 MTR_6g078450 62.253 506 160 5 8 487 5 505 0.0 639
MS.gene003914.t1 MTR_4g066640 59.332 509 174 5 9 487 1 506 0.0 627
MS.gene003914.t1 MTR_3g028720 60.236 508 168 5 7 487 7 507 0.0 627
MS.gene003914.t1 MTR_2g043200 67.949 468 140 8 26 487 49 512 0.0 625
MS.gene003914.t1 MTR_6g078380 62.327 507 162 5 7 487 3 506 0.0 622
MS.gene003914.t1 MTR_4g066630 61.134 494 161 4 21 487 19 508 0.0 620
MS.gene003914.t1 MTR_4g066240 59.118 499 176 2 15 487 10 506 0.0 619
MS.gene003914.t1 MTR_4g066580 58.627 510 181 4 4 487 3 508 0.0 617
MS.gene003914.t1 MTR_4g066590 60.800 500 162 4 19 487 6 502 0.0 616
MS.gene003914.t1 MTR_4g066210 60.451 488 161 4 29 487 28 512 0.0 615
MS.gene003914.t1 MTR_4g066240 59.118 499 175 3 15 487 10 505 0.0 615
MS.gene003914.t1 MTR_4g015460 65.063 478 153 10 20 487 21 494 0.0 609
MS.gene003914.t1 MTR_5g071520 58.915 516 171 6 7 487 8 517 0.0 601
MS.gene003914.t1 MTR_6g078450 62.801 457 140 4 8 438 5 457 0.0 578
MS.gene003914.t1 MTR_3g028720 60.131 459 150 4 7 438 7 459 0.0 562
MS.gene003914.t1 MTR_4g066340 63.488 430 128 3 84 487 6 432 0.0 561
MS.gene003914.t1 MTR_4g023000 55.328 488 185 4 25 487 8 487 0.0 553
MS.gene003914.t1 MTR_4g066630 61.806 432 135 3 33 437 31 459 0.0 552
MS.gene003914.t1 MTR_3g026280 54.108 499 186 5 15 487 5 486 0.0 548
MS.gene003914.t1 MTR_6g078330 64.691 405 114 3 109 487 1 402 0.0 539
MS.gene003914.t1 MTR_3g028720 59.574 423 138 4 7 402 7 423 9.60e-178 510
MS.gene003914.t1 MTR_6g078330 62.850 393 115 5 121 487 15 402 4.85e-176 505
MS.gene003914.t1 MTR_4g066630 61.965 397 121 3 33 402 31 424 1.03e-175 506
MS.gene003914.t1 MTR_4g066580 58.118 425 149 3 4 402 3 424 3.40e-175 504
MS.gene003914.t1 MTR_4g066240 56.763 414 151 2 15 402 10 421 2.38e-169 489
MS.gene003914.t1 MTR_3g026400 47.327 505 232 5 8 487 7 502 4.29e-166 483
MS.gene003914.t1 MTR_3g026620 48.413 504 227 5 9 487 8 503 2.34e-165 482
MS.gene003914.t1 MTR_4g067040 60.677 384 123 2 33 390 26 407 1.98e-164 475
MS.gene003914.t1 MTR_3g026400 49.011 455 201 4 58 487 23 471 6.02e-157 459
MS.gene003914.t1 MTR_4g081530 47.284 497 232 4 17 487 1 493 7.42e-156 457
MS.gene003914.t1 MTR_4g083000 47.162 511 218 8 7 487 8 496 2.28e-155 456
MS.gene003914.t1 MTR_4g067040 61.560 359 110 2 33 365 26 382 2.81e-155 451
MS.gene003914.t1 MTR_3g028720 57.772 386 130 4 7 365 7 386 2.82e-155 452
MS.gene003914.t1 MTR_5g044000 45.525 514 228 6 22 487 6 515 5.53e-155 456
MS.gene003914.t1 MTR_4g066640 56.010 391 140 4 9 369 1 389 7.91e-155 450
MS.gene003914.t1 MTR_4g066630 60.907 353 108 3 33 358 31 380 3.31e-151 441
MS.gene003914.t1 MTR_6g078330 58.777 376 125 4 8 357 6 377 5.13e-151 440
MS.gene003914.t1 MTR_3g033810 47.323 467 222 7 38 487 18 477 1.37e-147 436
MS.gene003914.t1 MTR_3g033790 47.097 465 219 8 41 487 19 474 4.31e-145 429
MS.gene003914.t1 MTR_0110s0040 43.222 509 250 9 6 487 9 505 4.35e-143 425
MS.gene003914.t1 MTR_0110s0030 42.829 509 252 9 6 487 9 505 5.00e-143 425
MS.gene003914.t1 MTR_4g131810 45.842 469 224 5 46 487 33 498 1.27e-141 421
MS.gene003914.t1 MTR_2g022760 44.048 504 244 7 9 487 14 504 4.89e-136 407
MS.gene003914.t1 MTR_7g033860 45.726 468 222 7 42 487 49 506 7.87e-134 401
MS.gene003914.t1 MTR_2g079580 43.856 472 235 7 41 487 32 498 4.73e-129 389
MS.gene003914.t1 MTR_2g079550 44.068 472 234 7 41 487 30 496 9.74e-129 389
MS.gene003914.t1 MTR_4g131800 43.275 513 250 9 46 532 521 1018 1.14e-127 400
MS.gene003914.t1 MTR_0108s0030 43.348 466 218 6 42 487 4 443 1.14e-126 380
MS.gene003914.t1 MTR_2g022710 41.551 503 262 8 10 487 7 502 3.18e-126 382
MS.gene003914.t1 MTR_4g083000 48.411 409 174 6 109 487 1 402 8.00e-125 374
MS.gene003914.t1 MTR_7g068910 41.104 489 243 9 27 487 17 488 7.61e-122 370
MS.gene003914.t1 MTR_5g068740 41.800 500 237 11 21 487 5 483 4.06e-121 369
MS.gene003914.t1 MTR_7g068910 40.281 499 243 10 27 487 17 498 1.04e-118 363
MS.gene003914.t1 MTR_3g026400 49.570 349 146 3 9 332 8 351 1.09e-118 357
MS.gene003914.t1 MTR_1g088610 42.000 500 234 10 24 487 3 482 2.25e-118 365
MS.gene003914.t1 MTR_1g088610 38.393 112 61 3 377 487 503 607 5.86e-13 72.4
MS.gene003914.t1 MTR_4g016920 41.458 480 228 10 40 487 26 484 5.09e-117 358
MS.gene003914.t1 MTR_7g051510 42.105 475 237 8 35 487 68 526 2.28e-113 349
MS.gene003914.t1 MTR_2g022760 45.297 404 193 5 109 487 1 401 2.61e-110 337
MS.gene003914.t1 MTR_2g079580 45.220 387 184 5 41 402 32 415 1.64e-109 335
MS.gene003914.t1 MTR_2g022710 40.086 464 245 6 1 439 1 456 9.61e-109 335
MS.gene003914.t1 MTR_7g051610 40.664 482 244 7 43 503 77 537 1.01e-108 337
MS.gene003914.t1 MTR_2g022710 40.086 464 245 6 1 439 1 456 1.68e-108 335
MS.gene003914.t1 MTR_7g051650 39.706 476 248 8 35 487 68 527 3.18e-106 331
MS.gene003914.t1 MTR_2g022710 41.943 422 212 6 6 402 6 419 2.19e-105 325
MS.gene003914.t1 MTR_7g051650 39.496 476 245 8 35 487 68 523 6.27e-104 325
MS.gene003914.t1 MTR_0110s0040 40.831 409 206 7 6 387 9 408 1.24e-101 315
MS.gene003914.t1 MTR_2g022710 40.842 404 211 5 109 487 1 401 3.09e-100 311
MS.gene003914.t1 MTR_2g022710 41.220 410 208 6 6 390 6 407 1.91e-99 309
MS.gene003914.t1 MTR_1g088630 39.606 457 203 11 60 487 14 426 8.08e-97 304
MS.gene003914.t1 MTR_4g016920 40.633 411 192 9 109 487 1 391 1.64e-92 291
MS.gene003914.t1 MTR_2g022710 42.257 381 190 6 10 365 7 382 2.13e-92 291
MS.gene003914.t1 MTR_7g068900 40.048 417 197 9 104 487 17 413 4.80e-92 292
MS.gene003914.t1 MTR_7g056747 39.461 408 200 6 103 487 9 392 2.71e-86 275
MS.gene003914.t1 MTR_1g088630 45.367 313 115 5 43 328 29 312 4.24e-85 270
MS.gene003914.t1 MTR_1g088630 47.368 266 108 3 43 281 29 289 6.96e-78 249
MS.gene003914.t1 MTR_4g016920 45.324 278 115 4 109 356 1 271 1.05e-73 238
MS.gene003914.t1 MTR_0110s0020 39.130 276 135 5 6 254 9 278 6.74e-65 216
MS.gene003914.t1 MTR_5g069350 42.857 175 44 7 329 487 48 182 2.19e-27 109
MS.gene003914.t1 MTR_4g122980 26.498 434 249 16 105 518 183 566 4.81e-25 110
MS.gene003914.t1 MTR_8g038650 41.237 97 57 0 242 338 58 154 1.17e-18 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003914.t1 AT5G42260 50.198 506 211 8 10 487 4 496 2.66e-177 512
MS.gene003914.t1 AT2G44450 52.220 473 192 5 41 487 31 495 8.70e-177 511
MS.gene003914.t1 AT5G44640 51.899 474 193 6 41 487 31 496 1.81e-176 510
MS.gene003914.t1 AT2G44480 49.897 485 213 4 29 487 23 503 1.83e-172 500
MS.gene003914.t1 AT2G44480 49.897 485 213 4 29 487 54 534 6.03e-172 500
MS.gene003914.t1 AT3G60130 51.266 474 196 6 41 487 30 495 1.21e-170 495
MS.gene003914.t1 AT5G24550 46.881 529 249 6 10 509 1 526 5.04e-165 482
MS.gene003914.t1 AT2G25630 47.619 504 207 8 11 487 5 478 1.08e-161 471
MS.gene003914.t1 AT5G24540 47.510 522 242 6 10 502 1 519 8.96e-160 468
MS.gene003914.t1 AT1G26560 48.626 473 214 3 41 487 32 501 1.13e-157 462
MS.gene003914.t1 AT5G54570 47.908 478 221 2 36 487 25 500 2.57e-157 462
MS.gene003914.t1 AT2G44490 47.727 484 220 6 34 487 7 487 2.06e-154 456
MS.gene003914.t1 AT3G60120 49.269 479 205 8 40 487 13 484 6.04e-154 454
MS.gene003914.t1 AT3G60140 46.154 481 228 5 35 487 20 497 1.66e-152 451
MS.gene003914.t1 AT5G36890 47.808 479 228 6 26 487 1 474 3.09e-149 439
MS.gene003914.t1 AT5G36890 47.808 479 228 6 26 487 1 474 3.44e-149 439
MS.gene003914.t1 AT2G44470 44.422 502 243 7 14 487 7 500 1.94e-146 436
MS.gene003914.t1 AT3G18080 46.398 472 220 8 41 487 39 502 5.05e-145 430
MS.gene003914.t1 AT1G51470 45.306 490 234 7 21 487 26 504 1.03e-144 429
MS.gene003914.t1 AT3G60130 51.456 412 165 6 103 487 40 443 2.86e-144 426
MS.gene003914.t1 AT1G47600 44.939 494 232 8 20 487 25 504 3.71e-143 425
MS.gene003914.t1 AT1G47600 44.399 491 238 7 20 487 25 503 8.62e-143 424
MS.gene003914.t1 AT2G44460 45.309 501 238 7 15 487 7 499 1.55e-142 426
MS.gene003914.t1 AT2G44480 49.010 404 178 3 109 487 1 401 1.11e-141 417
MS.gene003914.t1 AT3G18070 44.492 472 221 9 41 487 30 485 3.32e-138 412
MS.gene003914.t1 AT1G75940 46.667 480 215 8 43 487 39 512 1.22e-137 412
MS.gene003914.t1 AT3G18070 44.703 472 226 9 41 487 30 491 1.34e-137 410
MS.gene003914.t1 AT2G32860 42.400 500 248 5 26 487 69 566 1.88e-137 414
MS.gene003914.t1 AT2G32860 42.600 500 246 6 26 487 69 565 2.53e-136 411
MS.gene003914.t1 AT5G25980 43.615 509 241 12 14 487 20 517 3.08e-136 409
MS.gene003914.t1 AT5G24540 46.827 457 211 6 10 437 1 454 1.27e-135 404
MS.gene003914.t1 AT3G03640 40.307 521 274 6 8 498 5 518 1.29e-135 406
MS.gene003914.t1 AT5G54570 46.620 429 201 2 36 438 25 451 2.06e-135 403
MS.gene003914.t1 AT3G60130 50.000 412 160 7 103 487 40 432 4.34e-135 402
MS.gene003914.t1 AT3G21370 44.906 481 226 8 40 487 32 506 1.18e-134 404
MS.gene003914.t1 AT1G66280 42.992 528 254 12 1 495 1 514 1.26e-134 404
MS.gene003914.t1 AT3G09260 43.595 484 240 7 41 495 35 514 1.50e-133 401
MS.gene003914.t1 AT5G26000 43.359 512 248 11 9 487 4 506 2.84e-133 400
MS.gene003914.t1 AT5G28510 42.218 514 255 8 7 485 6 512 4.76e-133 400
MS.gene003914.t1 AT1G66270 42.661 511 248 8 15 495 19 514 1.49e-132 398
MS.gene003914.t1 AT1G61820 41.346 520 267 10 12 503 7 516 9.18e-131 393
MS.gene003914.t1 AT1G52400 42.664 518 246 10 6 487 8 510 1.07e-130 394
MS.gene003914.t1 AT1G52400 42.664 518 246 10 6 487 8 510 1.07e-130 394
MS.gene003914.t1 AT1G66270 42.466 511 247 9 15 495 19 512 2.32e-129 390
MS.gene003914.t1 AT5G54570 47.901 405 183 2 109 487 1 403 3.61e-127 381
MS.gene003914.t1 AT1G02850 43.361 482 219 10 38 487 21 480 1.81e-126 382
MS.gene003914.t1 AT2G44470 43.363 452 220 7 14 437 7 450 1.71e-125 377
MS.gene003914.t1 AT1G02850 41.584 505 219 10 38 487 21 504 2.13e-123 375
MS.gene003914.t1 AT3G60140 45.960 396 183 5 35 402 20 412 8.44e-123 371
MS.gene003914.t1 AT1G02850 41.584 505 218 11 38 487 21 503 5.01e-122 371
MS.gene003914.t1 AT2G44450 50.284 352 141 5 162 487 1 344 1.31e-120 361
MS.gene003914.t1 AT4G21760 40.519 501 261 8 15 487 25 516 3.53e-120 367
MS.gene003914.t1 AT5G25980 42.919 459 217 11 14 438 20 467 1.66e-118 360
MS.gene003914.t1 AT5G25980 42.919 459 217 11 14 438 20 467 1.66e-118 360
MS.gene003914.t1 AT1G61810 41.064 470 248 6 44 487 36 502 3.69e-117 358
MS.gene003914.t1 AT4G27830 41.597 476 232 9 40 487 22 479 5.80e-117 357
MS.gene003914.t1 AT5G26000 42.641 462 224 10 9 438 4 456 6.14e-116 353
MS.gene003914.t1 AT1G61810 40.733 464 246 6 44 481 36 496 5.27e-115 353
MS.gene003914.t1 AT4G21760 39.721 501 255 9 15 487 25 506 3.16e-114 351
MS.gene003914.t1 AT3G62750 41.151 469 237 8 38 487 20 468 1.26e-113 348
MS.gene003914.t1 AT3G62750 41.151 469 237 8 38 487 46 494 2.20e-113 349
MS.gene003914.t1 AT1G02850 41.286 482 202 11 38 487 21 453 3.89e-113 346
MS.gene003914.t1 AT4G27820 41.719 477 228 9 40 487 22 477 4.42e-112 345
MS.gene003914.t1 AT2G44480 51.447 311 126 1 29 314 54 364 4.54e-112 341
MS.gene003914.t1 AT1G52400 41.239 468 224 10 6 437 8 460 1.53e-107 332
MS.gene003914.t1 AT1G60090 38.478 473 246 8 41 487 24 477 8.65e-107 331
MS.gene003914.t1 AT4G22100 39.407 472 241 9 43 487 24 477 1.41e-106 331
MS.gene003914.t1 AT5G48375 41.403 442 198 9 25 457 22 411 3.63e-106 327
MS.gene003914.t1 AT3G62740 37.577 487 258 9 25 487 9 473 1.13e-105 328
MS.gene003914.t1 AT2G44470 42.172 396 193 7 14 381 7 394 3.36e-105 323
MS.gene003914.t1 AT1G60090 37.370 479 250 9 41 487 24 484 1.87e-103 323
MS.gene003914.t1 AT1G02850 42.005 419 174 8 38 402 21 424 4.90e-102 317
MS.gene003914.t1 AT1G45191 38.000 500 259 9 14 487 4 478 4.25e-101 317
MS.gene003914.t1 AT1G45191 38.478 473 249 8 43 487 31 489 8.50e-100 313
MS.gene003914.t1 AT1G45191 38.004 471 249 7 43 487 31 484 8.55e-100 313
MS.gene003914.t1 AT1G45191 38.125 480 253 9 43 487 31 501 1.56e-98 310
MS.gene003914.t1 AT3G62750 40.000 420 215 6 38 439 46 446 2.17e-98 308
MS.gene003914.t1 AT4G27830 41.278 407 195 8 109 487 1 391 2.05e-94 296
MS.gene003914.t1 AT1G61810 40.247 405 213 6 109 487 1 402 2.79e-94 296
MS.gene003914.t1 AT3G62740 37.156 436 230 7 25 437 9 423 8.27e-93 292
MS.gene003914.t1 AT2G44460 45.787 356 162 5 160 487 1 353 1.47e-92 292
MS.gene003914.t1 AT1G61810 39.740 385 205 4 44 402 36 419 3.21e-92 291
MS.gene003914.t1 AT3G18070 42.210 353 173 6 41 368 30 376 4.63e-92 289
MS.gene003914.t1 AT4G27820 41.176 408 195 8 109 487 1 392 2.49e-89 283
MS.gene003914.t1 AT4G27820 41.176 408 195 8 109 487 1 392 2.49e-89 283
MS.gene003914.t1 AT3G62750 43.671 316 154 3 38 336 20 328 4.89e-89 280
MS.gene003914.t1 AT3G62750 43.671 316 154 3 38 336 20 328 4.89e-89 280
MS.gene003914.t1 AT3G62750 42.296 331 165 4 23 336 33 354 4.25e-88 280
MS.gene003914.t1 AT3G62750 39.950 398 205 7 109 487 1 383 6.01e-88 279
MS.gene003914.t1 AT3G62750 39.950 398 205 7 109 487 1 383 6.01e-88 279
MS.gene003914.t1 AT1G60270 41.124 338 168 3 41 353 24 355 1.67e-87 277
MS.gene003914.t1 AT2G44480 47.970 271 138 2 217 487 30 297 3.87e-87 273
MS.gene003914.t1 AT1G51490 43.228 347 160 8 48 369 27 361 2.46e-85 272
MS.gene003914.t1 AT3G18070 43.558 326 154 6 187 487 94 414 8.82e-85 271
MS.gene003914.t1 AT3G18070 44.444 63 34 1 41 103 30 91 9.04e-11 64.7
MS.gene003914.t1 AT1G61820 39.788 377 196 8 155 503 4 377 8.43e-84 267
MS.gene003914.t1 AT1G45191 39.306 346 178 3 43 363 31 369 4.57e-80 258
MS.gene003914.t1 AT1G45191 40.541 333 166 3 43 350 31 356 9.54e-80 258
MS.gene003914.t1 AT3G18070 46.494 271 140 4 217 487 37 302 1.58e-79 254
MS.gene003914.t1 AT1G61810 43.609 266 124 3 44 284 36 300 9.43e-71 231
MS.gene003914.t1 AT1G60270 40.000 270 135 2 109 353 1 268 1.43e-62 209
MS.gene003914.t1 AT3G18070 40.496 242 118 3 187 403 94 334 1.57e-55 192
MS.gene003914.t1 AT3G18070 43.750 64 35 1 40 103 29 91 6.50e-11 64.7
MS.gene003914.t1 AT3G18070 43.850 187 104 1 217 403 37 222 1.31e-50 175
MS.gene003914.t1 AT5G16580 35.088 285 151 6 187 449 27 299 2.95e-44 160
MS.gene003914.t1 AT3G06510 26.244 442 242 20 104 518 159 543 3.56e-24 107
MS.gene003914.t1 AT3G06510 26.522 460 252 21 104 518 159 577 1.32e-23 105

Find 120 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTTACATAACAGAAAA+TGG 0.211122 4.2:+39390584 MS.gene003914:CDS
GAGCTATGCTTCAAGGAATT+TGG 0.216203 4.2:+39389388 MS.gene003914:CDS
GAGCAATCTAAGATGCTTAT+TGG 0.233883 4.2:+39389972 MS.gene003914:CDS
ATATTACTTGGCAGTATTCT+TGG 0.257124 4.2:-39388808 None:intergenic
GTAAGAGTTGCTGCCATTAT+TGG 0.260697 4.2:-39386626 None:intergenic
ATTTCATGCAGAACAAATAT+TGG 0.261428 4.2:+39387318 MS.gene003914:intron
TGGTATATTGGCAGCATAAT+TGG 0.267437 4.2:-39390030 None:intergenic
TGGCTGCAGGCTTCACAAAA+TGG 0.274091 4.2:+39389659 MS.gene003914:intron
CATGCAACTTACATAATATA+AGG 0.285884 4.2:-39389199 None:intergenic
ACCAATAGGCAGAGAGCTTT+TGG 0.296431 4.2:-39391204 None:intergenic
CGTGCTCTTGATTTCATGTT+TGG 0.298768 4.2:+39389758 MS.gene003914:CDS
ACTATTTGATTGTGGTATAT+TGG 0.305864 4.2:-39390042 None:intergenic
ATCACTTGAAGAGGCGCTTA+TGG 0.307229 4.2:+39390874 MS.gene003914:CDS
GACAACTTTGAATGGCTTGC+TGG 0.320944 4.2:+39391124 MS.gene003914:CDS
AAGCATCTTAGATTGCTCTT+TGG 0.341455 4.2:-39389967 None:intergenic
CGGAAGAGGACAAAGTGTTT+TGG 0.352971 4.2:+39387060 MS.gene003914:CDS
GCTGGATACACTAGACGTTT+TGG 0.353618 4.2:+39391142 MS.gene003914:CDS
TGAGCCACACTCTTACAGTT+TGG 0.354248 4.2:+39389441 MS.gene003914:CDS
ATCAATGAGCTACTTGATAA+TGG 0.365239 4.2:+39388983 MS.gene003914:CDS
GTACTCATCTTGTAAGGCTT+GGG 0.367812 4.2:-39389161 None:intergenic
TAGCACCTGTGTTCCAATAA+TGG 0.369181 4.2:+39386613 MS.gene003914:CDS
TAGGGCATCATGGCAATCTA+TGG 0.374268 4.2:+39386548 None:intergenic
TTATGACAGCCGAGCGTAAC+GGG 0.381351 4.2:+39390323 MS.gene003914:intron
GAGCCACACTCTTACAGTTT+GGG 0.385519 4.2:+39389442 MS.gene003914:CDS
ACCAAAAGCTCTCTGCCTAT+TGG 0.390808 4.2:+39391203 MS.gene003914:CDS
GCTTCACAAAATGGTTCAAT+AGG 0.391070 4.2:+39389668 MS.gene003914:CDS
GTAAGGTTAACAAGTGTTGT+AGG 0.395045 4.2:-39386650 None:intergenic
CTATGCCGAGCTATGCTTCA+AGG 0.398707 4.2:+39389381 MS.gene003914:CDS
CATGAAATCAAGAGCACGTT+CGG 0.407930 4.2:-39389753 None:intergenic
TTACTCACCATTGGACCAAT+TGG 0.412566 4.2:-39390349 None:intergenic
TCAGTGTTGCACCTGATGAT+TGG 0.415870 4.2:-39389533 None:intergenic
GATTGCTCTTTGGTGAACTT+TGG 0.418699 4.2:-39389957 None:intergenic
GGGGAAGATCCCAGTGGAAA+AGG 0.421057 4.2:-39389141 None:intergenic
TTTATGCAGCCATTGACAAC+AGG 0.426904 4.2:+39389891 MS.gene003914:CDS
TGATCAGTATCATCGTTATA+AGG 0.429927 4.2:+39387366 MS.gene003914:CDS
CTTGGCTATTTGTTTATCCA+AGG 0.435078 4.2:+39390513 MS.gene003914:CDS
TGTTACTAAACACACCTTGT+AGG 0.437916 4.2:-39386729 None:intergenic
GCAAAAGACACCATGCTTAG+TGG 0.442227 4.2:-39389921 None:intergenic
TACTGGCTCGGCCTCCTACA+AGG 0.442641 4.2:+39386715 MS.gene003914:CDS
CATAGCATACGCTTTGTTCA+AGG 0.443701 4.2:-39392334 None:intergenic
ACTCTGGGTATCCGATCAAT+TGG 0.454676 4.2:-39392520 None:intergenic
GGGAGATATGGCACCAGAGC+GGG 0.463487 4.2:+39391922 MS.gene003914:CDS
GAGCGTAACGGGATACCAAT+TGG 0.463780 4.2:+39390334 MS.gene003914:CDS
ATGCAACTTACATAATATAA+GGG 0.466581 4.2:-39389198 None:intergenic
TTGGAGACCGAGTGAAGCAT+TGG 0.468571 4.2:+39389407 MS.gene003914:CDS
TGTACTCATCTTGTAAGGCT+TGG 0.471788 4.2:-39389162 None:intergenic
CAGTTCTTAAGATGTTTGTT+CGG 0.473344 4.2:-39392299 None:intergenic
GTAAGAGTGTGGCTCATTGA+AGG 0.479263 4.2:-39389434 None:intergenic
TGAGTATCCTTGAGATAGCT+TGG 0.481531 4.2:-39390077 None:intergenic
CATACAGATTCTCCATCTCT+TGG 0.492132 4.2:+39388785 MS.gene003914:CDS
GCTGCAAATGAAGGCGGAAG+AGG 0.498143 4.2:+39387046 MS.gene003914:CDS
GATCGGATACCCAGAGTTGT+GGG 0.502250 4.2:+39392526 MS.gene003914:CDS
CAAATATTGGATGGAAGCAA+TGG 0.503237 4.2:+39387331 MS.gene003914:CDS
GTTGCCGATATGCACTGAAT+TGG 0.506602 4.2:-39392635 None:intergenic
GCCACTGTACTCATCTTGTA+AGG 0.506700 4.2:-39389167 None:intergenic
CATGCAGAACAAATATTGGA+TGG 0.516085 4.2:+39387322 MS.gene003914:intron
GGGAAGATCCCAGTGGAAAA+GGG 0.516334 4.2:-39389140 None:intergenic
CATCTATGTCTCCTCTACCT+TGG 0.516474 4.2:+39386572 MS.gene003914:CDS
AGAGCCAATTCAGTGCATAT+CGG 0.516864 4.2:+39392631 MS.gene003914:CDS
TGGTTGTGTGAGGCGATGTA+AGG 0.517167 4.2:-39389472 None:intergenic
CAGTATTCTTGGCCAAGAGA+TGG 0.517210 4.2:-39388797 None:intergenic
GAGTCAAGACACCAAGGTAG+AGG 0.517319 4.2:-39386583 None:intergenic
CTCTTGATTTCATGTTTGGA+TGG 0.519547 4.2:+39389762 MS.gene003914:CDS
GGATACTCTCCTGTTGTCAA+TGG 0.521047 4.2:-39389900 None:intergenic
GATATCTGCTTCCAATTGAT+CGG 0.521186 4.2:+39392509 MS.gene003914:CDS
TATGAAGGTGCTGCAAATGA+AGG 0.524676 4.2:+39387037 MS.gene003914:CDS
CTTGCGTCACTATTTGATTG+TGG 0.528573 4.2:-39390050 None:intergenic
GCACATTGCACCTCGCCCAT+TGG 0.529300 4.2:-39392564 None:intergenic
CATCATGGTGTGAAAGTACA+AGG 0.530432 4.2:+39391079 MS.gene003914:CDS
CAGCTGCATGAGCAAGGAGT+TGG 0.531565 4.2:-39389492 None:intergenic
ACTTTATAGAACCAATCATC+AGG 0.533812 4.2:+39389522 MS.gene003914:CDS
CAAGGTAGAGGAGACATAGA+TGG 0.534272 4.2:-39386571 None:intergenic
GGAATCGAGGACAAACCAAT+GGG 0.541565 4.2:+39392549 MS.gene003914:CDS
CATATCGGCAACACATCAAA+GGG 0.541569 4.2:+39392646 MS.gene003914:CDS
TTGGCTATTTGTTTATCCAA+GGG 0.543306 4.2:+39390514 MS.gene003914:CDS
TGCTGCCATTATTGGAACAC+AGG 0.543708 4.2:-39386618 None:intergenic
CGGGATACCAATTGGTCCAA+TGG 0.545179 4.2:+39390342 MS.gene003914:CDS
CAGTGGAAAAGGGTCACAAA+TGG 0.545800 4.2:-39389130 None:intergenic
GCATATCGGCAACACATCAA+AGG 0.546330 4.2:+39392645 MS.gene003914:CDS
TCCAACACTATCACTTGAAG+AGG 0.557942 4.2:+39390865 MS.gene003914:CDS
CTTATGACAGCCGAGCGTAA+CGG 0.558816 4.2:+39390322 MS.gene003914:intron
TGACAGCAGCTGCATGAGCA+AGG 0.559687 4.2:-39389498 None:intergenic
TGATCGGATACCCAGAGTTG+TGG 0.565578 4.2:+39392525 MS.gene003914:CDS
GGCTATTTGTTTATCCAAGG+GGG 0.566606 4.2:+39390516 MS.gene003914:CDS
AATTGGTATCCCGTTACGCT+CGG 0.569597 4.2:-39390332 None:intergenic
GCATCAGCTTAAATTCTCAC+TGG 0.570237 4.2:+39389690 MS.gene003914:CDS
AAATATGCTCATGAACATCC+AGG 0.571960 4.2:+39387085 MS.gene003914:CDS
AACAAGTGGACATGAGGAAG+AGG 0.579145 4.2:+39392601 MS.gene003914:CDS
GCAGAAGGAAAAGTGAGTGC+AGG 0.581108 4.2:+39388923 MS.gene003914:intron
CGAGGACAAACCAATGGGCG+AGG 0.589327 4.2:+39392554 MS.gene003914:CDS
CTTGAACAAAGCGTATGCTA+TGG 0.595043 4.2:+39392335 MS.gene003914:CDS
AAATTCCTTGAAGCATAGCT+CGG 0.595318 4.2:-39389386 None:intergenic
GACAACAACAAGTGGACATG+AGG 0.604486 4.2:+39392595 MS.gene003914:CDS
TACTCATCTTGTAAGGCTTG+GGG 0.605947 4.2:-39389160 None:intergenic
AGGTAATCCAATGCTTCACT+CGG 0.607012 4.2:-39389414 None:intergenic
AAGCGATCCAAGCTATCTCA+AGG 0.608460 4.2:+39390070 MS.gene003914:CDS
TACTAAACACACCTTGTAGG+AGG 0.609927 4.2:-39386726 None:intergenic
GCTTTGTTCAAGGTCGACAA+TGG 0.616318 4.2:-39392324 None:intergenic
TATATTGGCAGCATAATTGG+AGG 0.618202 4.2:-39390027 None:intergenic
GGGAATCGAGGACAAACCAA+TGG 0.619403 4.2:+39392548 MS.gene003914:CDS
AGTGCAGGTATAAATCAAGA+AGG 0.620837 4.2:+39388938 MS.gene003914:CDS
AGGAGAGTATCCACTAAGCA+TGG 0.625303 4.2:+39389911 MS.gene003914:CDS
GCCTCTTCAAGTGATAGTGT+TGG 0.629788 4.2:-39390866 None:intergenic
TGGCTATTTGTTTATCCAAG+GGG 0.630009 4.2:+39390515 MS.gene003914:CDS
TAGTAAGAGTCAAGACACCA+AGG 0.630413 4.2:-39386589 None:intergenic
GAGCGGGTTTATAAAACCAA+TGG 0.632014 4.2:+39391938 MS.gene003914:CDS
GGCGAGGTGCAATGTGCGTG+TGG 0.632935 4.2:+39392570 MS.gene003914:CDS
CTTGGATAAACAAATAGCCA+AGG 0.633861 4.2:-39390512 None:intergenic
ATCGGATACCCAGAGTTGTG+GGG 0.638879 4.2:+39392527 MS.gene003914:CDS
ACGTACAGGCTGCTTCACCT+TGG 0.643092 4.2:+39390495 MS.gene003914:intron
GTGCTGATAATGTAGTATGA+AGG 0.648731 4.2:+39387022 MS.gene003914:intron
AGCAAGGAGTTGGTTGTGTG+AGG 0.661595 4.2:-39389482 None:intergenic
TCGGATACCCAGAGTTGTGG+GGG 0.662490 4.2:+39392528 MS.gene003914:CDS
GAACCCAAACTGTAAGAGTG+TGG 0.667067 4.2:-39389445 None:intergenic
TCTAACGTGTCATTTGAGAA+CGG 0.689990 4.2:-39389719 None:intergenic
GAAGGTGCTGCAAATGAAGG+CGG 0.691640 4.2:+39387040 MS.gene003914:CDS
GGGGAGATATGGCACCAGAG+CGG 0.702638 4.2:+39391921 MS.gene003914:intron
GTGTGGCAGACAACAACAAG+TGG 0.705079 4.2:+39392587 MS.gene003914:CDS
GCCTTACAAGATGAGTACAG+TGG 0.728748 4.2:+39389166 MS.gene003914:CDS
AGGCTTGGGGAAGATCCCAG+TGG 0.749355 4.2:-39389147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAATATTTAAATTAT+AGG + chr4.2:39390824-39390843 MS.gene003914:intron 0.0%
!! AAAATAAAATAAAATTGAAG+AGG - chr4.2:39387284-39387303 None:intergenic 10.0%
!! TAATATTTAAATTATAGGTA+TGG + chr4.2:39390829-39390848 MS.gene003914:intron 10.0%
!!! ATAATTTATTTATTTTTTGC+AGG + chr4.2:39389868-39389887 MS.gene003914:intron 10.0%
!!! ATTTTTTACAAAAATAATTG+TGG - chr4.2:39386825-39386844 None:intergenic 10.0%
!!! TATGTTTTTAAATTTTGTAA+TGG + chr4.2:39386854-39386873 MS.gene003914:intron 10.0%
!!! TCATTTCTTTTTTATTTTTT+TGG + chr4.2:39388329-39388348 MS.gene003914:intron 10.0%
!!! TTTTTTACAAAAATAATTGT+GGG - chr4.2:39386824-39386843 None:intergenic 10.0%
!! AAAGAAGTGAAAAAAATTTA+GGG - chr4.2:39388261-39388280 None:intergenic 15.0%
!! AGATAGATACTTATAAATTA+AGG - chr4.2:39391347-39391366 None:intergenic 15.0%
!! ATAGATTAGAGATTAAAAAA+AGG - chr4.2:39391030-39391049 None:intergenic 15.0%
!! ATCATAGTAATATAAATTGA+TGG + chr4.2:39389085-39389104 MS.gene003914:intron 15.0%
!! TAAAGAAGTGAAAAAAATTT+AGG - chr4.2:39388262-39388281 None:intergenic 15.0%
!! TAACTTGAATGAAAAATAAA+AGG + chr4.2:39387196-39387215 MS.gene003914:intron 15.0%
!! TAATAAATTTGAATATGCAT+AGG - chr4.2:39389582-39389601 None:intergenic 15.0%
!! TTGAATAAATTCATATTACT+TGG - chr4.2:39388823-39388842 None:intergenic 15.0%
!! TTTAAGAATAAGATAAGATT+AGG - chr4.2:39390745-39390764 None:intergenic 15.0%
!!! AAACATTTTACATCAAATAA+AGG - chr4.2:39390292-39390311 None:intergenic 15.0%
!!! AGATATTTAATGTTTGATTT+TGG - chr4.2:39388042-39388061 None:intergenic 15.0%
!!! ATAGTTCTCAAAAATATTTT+TGG - chr4.2:39388125-39388144 None:intergenic 15.0%
!!! ATTCAAGTTAATTAATGTTT+TGG - chr4.2:39389636-39389655 None:intergenic 15.0%
!!! GTTTTTTTTGTACAAATAAA+TGG - chr4.2:39388442-39388461 None:intergenic 15.0%
!!! TCTAAATTTATTGTTTTTCA+AGG - chr4.2:39386781-39386800 None:intergenic 15.0%
!!! TGCTATCTTATAAAATTTTA+GGG + chr4.2:39391901-39391920 MS.gene003914:intron 15.0%
!!! TTGCTATCTTATAAAATTTT+AGG + chr4.2:39391900-39391919 MS.gene003914:intron 15.0%
!!! TTTAGTTTATTGATTTGATT+AGG - chr4.2:39390797-39390816 None:intergenic 15.0%
!!! TTTATTTTATTTTGCCTAAT+TGG + chr4.2:39387291-39387310 MS.gene003914:intron 15.0%
!!! TTTTGACTTTTTTTTTGTTA+AGG + chr4.2:39391056-39391075 MS.gene003914:intron 15.0%
!!! TTTTTCTTTTCATAAAAATG+TGG - chr4.2:39387788-39387807 None:intergenic 15.0%
!! AAAAAAATTGCATACACATA+AGG - chr4.2:39388687-39388706 None:intergenic 20.0%
!! AAAAGAAAAATATGCGTATA+GGG + chr4.2:39387798-39387817 MS.gene003914:intron 20.0%
!! AAAATGGAACATAATATATC+TGG + chr4.2:39391384-39391403 MS.gene003914:intron 20.0%
!! AACAAAATAAATTTACGTAC+AGG + chr4.2:39390481-39390500 MS.gene003914:intron 20.0%
!! AAGAACAATAATATCTTCAA+AGG + chr4.2:39388196-39388215 MS.gene003914:intron 20.0%
!! AAGTAGCTTAAGTATATAAA+AGG - chr4.2:39390708-39390727 None:intergenic 20.0%
!! AAGTTCATATCATATTATTG+GGG - chr4.2:39391285-39391304 None:intergenic 20.0%
!! ACTATGTATAATTCTTCATA+AGG - chr4.2:39390140-39390159 None:intergenic 20.0%
!! AGAAAATAAAGAAATATACC+TGG - chr4.2:39387106-39387125 None:intergenic 20.0%
!! ATAATATTCATACAATCTTC+TGG - chr4.2:39391802-39391821 None:intergenic 20.0%
!! ATGCAACTTACATAATATAA+GGG - chr4.2:39389201-39389220 None:intergenic 20.0%
!! ATTGATGGAATTATTGATAT+AGG + chr4.2:39389100-39389119 MS.gene003914:intron 20.0%
!! CAAGTTCATATCATATTATT+GGG - chr4.2:39391286-39391305 None:intergenic 20.0%
!! CTATTAAGATGTGAAAATAA+TGG - chr4.2:39388728-39388747 None:intergenic 20.0%
!! GAATATTATGAAAGATTGTA+TGG + chr4.2:39391813-39391832 MS.gene003914:intron 20.0%
!! TAAAAAAAGGAAACTAAGTA+AGG - chr4.2:39391017-39391036 None:intergenic 20.0%
!! TATGCATAGGAAAAAAAAAT+AGG - chr4.2:39389569-39389588 None:intergenic 20.0%
!! TTGATTTACATAACAGAAAA+TGG + chr4.2:39390584-39390603 MS.gene003914:CDS 20.0%
!! TTGTAAAATTTCACATGAAA+TGG + chr4.2:39388496-39388515 MS.gene003914:intron 20.0%
!! TTTCTATATGAATGATGATT+GGG + chr4.2:39391717-39391736 MS.gene003914:intron 20.0%
!!! AAATCATAGAATAAAGTATC+TGG - chr4.2:39390442-39390461 None:intergenic 20.0%
!!! AGATTGCTTTTATATCAAAT+TGG - chr4.2:39387397-39387416 None:intergenic 20.0%
!!! ATTTTTTTGTCAAGTATATG+TGG + chr4.2:39388699-39388718 MS.gene003914:intron 20.0%
!!! CAAGTTATTTTACTTTTGAA+GGG - chr4.2:39387183-39387202 None:intergenic 20.0%
!!! CATTAATTAACTTGAATTCA+TGG + chr4.2:39389639-39389658 MS.gene003914:intron 20.0%
!!! CATTATTTTCACATCTTAAT+AGG + chr4.2:39388726-39388745 MS.gene003914:intron 20.0%
!!! GCTATCTTATAAAATTTTAG+GGG + chr4.2:39391902-39391921 MS.gene003914:intron 20.0%
!!! TCAAGTTATTTTACTTTTGA+AGG - chr4.2:39387184-39387203 None:intergenic 20.0%
!!! TTCTGAACTTTTTATTTTGT+TGG - chr4.2:39388588-39388607 None:intergenic 20.0%
!!! TTTCATGTGAAATTTTACAA+TGG - chr4.2:39388496-39388515 None:intergenic 20.0%
!!! TTTTCTGTTATGTAAATCAA+AGG - chr4.2:39390584-39390603 None:intergenic 20.0%
! AAACTATATATCACCATGTA+GGG - chr4.2:39389305-39389324 None:intergenic 25.0%
! AAATATATACGAGAGATTCT+TGG + chr4.2:39392106-39392125 MS.gene003914:intron 25.0%
! AAATGATAATTTGACAGATC+TGG + chr4.2:39388232-39388251 MS.gene003914:intron 25.0%
! ACTATTTGATTGTGGTATAT+TGG - chr4.2:39390045-39390064 None:intergenic 25.0%
! ACTTAATGACCAAAGATTTA+GGG + chr4.2:39386928-39386947 MS.gene003914:intron 25.0%
! ATAATATCTTCAAAGGAAGT+CGG + chr4.2:39388203-39388222 MS.gene003914:intron 25.0%
! ATGTTCATAAATAACATGTG+TGG - chr4.2:39388067-39388086 None:intergenic 25.0%
! ATTAATGAAAGCTTGAGAAT+TGG + chr4.2:39386972-39386991 MS.gene003914:intron 25.0%
! ATTATGAAAGATTGTATGGA+AGG + chr4.2:39391817-39391836 MS.gene003914:intron 25.0%
! ATTCCGAAGATCAATAATAT+TGG + chr4.2:39392021-39392040 MS.gene003914:intron 25.0%
! ATTTCATGCAGAACAAATAT+TGG + chr4.2:39387318-39387337 MS.gene003914:intron 25.0%
! CAAAAATAATTGTGGGTAAA+TGG - chr4.2:39386817-39386836 None:intergenic 25.0%
! CATGCAACTTACATAATATA+AGG - chr4.2:39389202-39389221 None:intergenic 25.0%
! CCAAGTTCATATCATATTAT+TGG - chr4.2:39391287-39391306 None:intergenic 25.0%
! CCAATAATATGATATGAACT+TGG + chr4.2:39391284-39391303 MS.gene003914:intron 25.0%
! GAAAAGAAAAATATGCGTAT+AGG + chr4.2:39387797-39387816 MS.gene003914:intron 25.0%
! GGCTAATAGTTTGAATAAAA+CGG + chr4.2:39387630-39387649 MS.gene003914:intron 25.0%
! GTTTCTATATGAATGATGAT+TGG + chr4.2:39391716-39391735 MS.gene003914:intron 25.0%
! TACTTAATGACCAAAGATTT+AGG + chr4.2:39386927-39386946 MS.gene003914:intron 25.0%
! TCATAAAAATGTGGTCATTA+CGG - chr4.2:39387779-39387798 None:intergenic 25.0%
! TGAAACTCTAAGTGAATTAA+AGG - chr4.2:39388848-39388867 None:intergenic 25.0%
! TGTACAAATAAATGGTTTCT+TGG - chr4.2:39388434-39388453 None:intergenic 25.0%
! TGTTCATAAATAACATGTGT+GGG - chr4.2:39388066-39388085 None:intergenic 25.0%
! TTAATAATGCAAACTTTGCA+AGG - chr4.2:39387425-39387444 None:intergenic 25.0%
! TTAATGAAAGCTTGAGAATT+GGG + chr4.2:39386973-39386992 MS.gene003914:intron 25.0%
!! AAAATTGAAGAGGCATAATA+AGG - chr4.2:39387274-39387293 None:intergenic 25.0%
!! AAATTTGTTCCAGGTTTATA+CGG - chr4.2:39387959-39387978 None:intergenic 25.0%
!! ACACATGTTATTTATGAACA+TGG + chr4.2:39388066-39388085 MS.gene003914:intron 25.0%
!! ACTTTTCTATCAATGGTTTA+AGG - chr4.2:39390219-39390238 None:intergenic 25.0%
!! ATATTATGTTCCATTTTACC+AGG - chr4.2:39391381-39391400 None:intergenic 25.0%
!! ATGTGAAATTTTACAATGGT+TGG - chr4.2:39388492-39388511 None:intergenic 25.0%
!! TATAAACCTGGAACAAATTT+TGG + chr4.2:39387959-39387978 MS.gene003914:intron 25.0%
!! TTGCTGAAAAGTGTATATTA+TGG - chr4.2:39387668-39387687 None:intergenic 25.0%
!!! AAGTTTTGAAAATGCCATTT+TGG - chr4.2:39387523-39387542 None:intergenic 25.0%
!!! AATCTCCATCAATTTTTTAC+GGG + chr4.2:39392249-39392268 MS.gene003914:CDS 25.0%
!!! ATAAAATTTTAGGGGAGATA+TGG + chr4.2:39391910-39391929 MS.gene003914:intron 25.0%
!!! ATTGGCTCATTTGATTTTAT+TGG + chr4.2:39389990-39390009 MS.gene003914:CDS 25.0%
!!! CATTTTGACTTTTCTATCAA+TGG - chr4.2:39390226-39390245 None:intergenic 25.0%
!!! CGTCTTTTTCAATATTAATC+TGG + chr4.2:39388156-39388175 MS.gene003914:intron 25.0%
!!! GAATCTCCATCAATTTTTTA+CGG + chr4.2:39392248-39392267 MS.gene003914:CDS 25.0%
!!! TTTTTTTTGTTAAGGCATCA+TGG + chr4.2:39391064-39391083 MS.gene003914:intron 25.0%
AAAAAAATCGCGTGAATTAG+GGG + chr4.2:39387453-39387472 MS.gene003914:intron 30.0%
AACGAGATGAGTTGTTTAAT+CGG - chr4.2:39391699-39391718 None:intergenic 30.0%
AAGAAAGTTCCTAAACCAAT+AGG - chr4.2:39391221-39391240 None:intergenic 30.0%
AAGATCAATAATATTGGTGG+AGG + chr4.2:39392027-39392046 MS.gene003914:intron 30.0%
AATCGGTGTAGAAAAATTAG+AGG - chr4.2:39391682-39391701 None:intergenic 30.0%
AATTGTCTGATTGGAAATAG+TGG + chr4.2:39392162-39392181 MS.gene003914:intron 30.0%
ACAAAAAAATCGCGTGAATT+AGG + chr4.2:39387451-39387470 MS.gene003914:intron 30.0%
ACTTTATAGAACCAATCATC+AGG + chr4.2:39389522-39389541 MS.gene003914:CDS 30.0%
AGAATGAGAAAGAAGAAATC+TGG + chr4.2:39391963-39391982 MS.gene003914:intron 30.0%
AGATCAATAATATTGGTGGA+GGG + chr4.2:39392028-39392047 MS.gene003914:intron 30.0%
AGTACCAAAAATGAAACCTT+TGG - chr4.2:39386699-39386718 None:intergenic 30.0%
ATATTACTTGGCAGTATTCT+TGG - chr4.2:39388811-39388830 None:intergenic 30.0%
ATCAATGAGCTACTTGATAA+TGG + chr4.2:39388983-39389002 MS.gene003914:CDS 30.0%
ATCAGAAAACAAAACACAAG+AGG - chr4.2:39387899-39387918 None:intergenic 30.0%
CAAAAAAATCGCGTGAATTA+GGG + chr4.2:39387452-39387471 MS.gene003914:intron 30.0%
CAAACTATATATCACCATGT+AGG - chr4.2:39389306-39389325 None:intergenic 30.0%
CAGTTCTTAAGATGTTTGTT+CGG - chr4.2:39392302-39392321 None:intergenic 30.0%
CATGAAATGGAGTTTGATAT+AGG + chr4.2:39388509-39388528 MS.gene003914:intron 30.0%
CCACCAATATTATTGATCTT+CGG - chr4.2:39392027-39392046 None:intergenic 30.0%
CTTGTAATGATTCTCAAAGA+TGG + chr4.2:39387930-39387949 MS.gene003914:intron 30.0%
CTTTATAAGAGATTCGACTT+CGG + chr4.2:39388277-39388296 MS.gene003914:intron 30.0%
GTACCAAAAATGAAACCTTT+GGG - chr4.2:39386698-39386717 None:intergenic 30.0%
TAATGAAAGCTTGAGAATTG+GGG + chr4.2:39386974-39386993 MS.gene003914:intron 30.0%
TATATATTTGAGTCCAAGCT+AGG - chr4.2:39392095-39392114 None:intergenic 30.0%
TATCTGAATTCCTGGTAAAA+TGG + chr4.2:39391368-39391387 MS.gene003914:intron 30.0%
TATCTGCATAACCTCTTTAA+TGG - chr4.2:39391870-39391889 None:intergenic 30.0%
TCAAATCAGAATTGTCTGAT+TGG + chr4.2:39392153-39392172 MS.gene003914:intron 30.0%
TCACTTAGAGTTTCATGTAT+AGG + chr4.2:39388853-39388872 MS.gene003914:intron 30.0%
TCAGAAAACAAAACACAAGA+GGG - chr4.2:39387898-39387917 None:intergenic 30.0%
TCTATCTATATCTGAATTCC+TGG + chr4.2:39391360-39391379 MS.gene003914:intron 30.0%
TCTGGATTTGTACAAATAAG+AGG - chr4.2:39388361-39388380 None:intergenic 30.0%
TGATCAGTATCATCGTTATA+AGG + chr4.2:39387366-39387385 MS.gene003914:CDS 30.0%
TGCATGAAATTACACCAATT+AGG - chr4.2:39387308-39387327 None:intergenic 30.0%
TGGAATTATTGATATAGGTC+TGG + chr4.2:39389105-39389124 MS.gene003914:intron 30.0%
TTATTGATCTTCGGAATCAT+TGG - chr4.2:39392018-39392037 None:intergenic 30.0%
TTCTTTCTCATTCTTACCAT+TGG - chr4.2:39391957-39391976 None:intergenic 30.0%
TTGGCTATTTGTTTATCCAA+GGG + chr4.2:39390514-39390533 MS.gene003914:CDS 30.0%
! AAGTACAAGGATATTTTGCA+TGG + chr4.2:39391092-39391111 MS.gene003914:CDS 30.0%
! CAACAAAAAAAAGCGCATAA+TGG + chr4.2:39387685-39387704 MS.gene003914:intron 30.0%
! CATGTTATTTATGAACATGG+AGG + chr4.2:39388069-39388088 MS.gene003914:intron 30.0%
! CTGAAAAGTGTATATTATGG+CGG - chr4.2:39387665-39387684 None:intergenic 30.0%
! TAACTGTTTTCGTGAAAATG+TGG - chr4.2:39387732-39387751 None:intergenic 30.0%
! TACGTCATAAAGCTTTATCA+TGG - chr4.2:39389277-39389296 None:intergenic 30.0%
! TGTCTTTATCCATGATTTTG+TGG - chr4.2:39389813-39389832 None:intergenic 30.0%
! TTTCCCAAAGGTTTCATTTT+TGG + chr4.2:39386692-39386711 MS.gene003914:CDS 30.0%
!! AACCACTGTTTTAAACTTTG+TGG - chr4.2:39387561-39387580 None:intergenic 30.0%
!! ATATTTTGCATGGTCACTTT+TGG + chr4.2:39391102-39391121 MS.gene003914:CDS 30.0%
!!! AAAGGTTTCATTTTTGGTAC+TGG + chr4.2:39386698-39386717 MS.gene003914:CDS 30.0%
!!! AATGCCATTTTGGTTTATTG+TGG - chr4.2:39387513-39387532 None:intergenic 30.0%
!!! CTTGTGTTTTGTTTTCTGAT+CGG + chr4.2:39387899-39387918 MS.gene003914:intron 30.0%
!!! TTGTGTTTTGTTTTCTGATC+GGG + chr4.2:39387900-39387919 MS.gene003914:intron 30.0%
AAAAAATCGCGTGAATTAGG+GGG + chr4.2:39387454-39387473 MS.gene003914:intron 35.0%
AAATATGCTCATGAACATCC+AGG + chr4.2:39387085-39387104 MS.gene003914:CDS 35.0%
AAATTCCTTGAAGCATAGCT+CGG - chr4.2:39389389-39389408 None:intergenic 35.0%
AAGCATCTTAGATTGCTCTT+TGG - chr4.2:39389970-39389989 None:intergenic 35.0%
AATGAAAGCTTGAGAATTGG+GGG + chr4.2:39386975-39386994 MS.gene003914:intron 35.0%
ACACTTCATCCCTAAATCTT+TGG - chr4.2:39386940-39386959 None:intergenic 35.0%
ACTCTTCTATTCATTTGTCC+TGG - chr4.2:39392391-39392410 None:intergenic 35.0%
AGAAGAACCACCATGTAAAT+TGG + chr4.2:39387583-39387602 MS.gene003914:intron 35.0%
AGATTTAGGGATGAAGTGTA+TGG + chr4.2:39386941-39386960 MS.gene003914:intron 35.0%
AGTGCAGGTATAAATCAAGA+AGG + chr4.2:39388938-39388957 MS.gene003914:CDS 35.0%
ATATACGAGAGATTCTTGGT+GGG + chr4.2:39392110-39392129 MS.gene003914:intron 35.0%
ATCAGCATCATTATCTAGCT+TGG - chr4.2:39392492-39392511 None:intergenic 35.0%
ATCCAGAAAAACGTAAAACC+AGG + chr4.2:39388374-39388393 MS.gene003914:intron 35.0%
CAAATATTGGATGGAAGCAA+TGG + chr4.2:39387331-39387350 MS.gene003914:CDS 35.0%
CAAGACCCGTAAAAAATTGA+TGG - chr4.2:39392257-39392276 None:intergenic 35.0%
CACAATTGTCCACAAAATCA+TGG + chr4.2:39389801-39389820 MS.gene003914:intron 35.0%
CATAGTGCACGTGAATAAAA+TGG + chr4.2:39387606-39387625 MS.gene003914:intron 35.0%
CATGCAGAACAAATATTGGA+TGG + chr4.2:39387322-39387341 MS.gene003914:intron 35.0%
CCGAAGATCAATAATATTGG+TGG + chr4.2:39392024-39392043 MS.gene003914:intron 35.0%
CTATTCATTTGTCCTGGTTA+TGG - chr4.2:39392385-39392404 None:intergenic 35.0%
CTCTTGATTTCATGTTTGGA+TGG + chr4.2:39389762-39389781 MS.gene003914:CDS 35.0%
CTTGGATAAACAAATAGCCA+AGG - chr4.2:39390515-39390534 None:intergenic 35.0%
CTTGGCTATTTGTTTATCCA+AGG + chr4.2:39390513-39390532 MS.gene003914:CDS 35.0%
GATATCTGCTTCCAATTGAT+CGG + chr4.2:39392509-39392528 MS.gene003914:CDS 35.0%
GATTTAGGGATGAAGTGTAT+GGG + chr4.2:39386942-39386961 MS.gene003914:intron 35.0%
GCTTCACAAAATGGTTCAAT+AGG + chr4.2:39389668-39389687 MS.gene003914:CDS 35.0%
TAAAAATGTGGTCATTACGG+AGG - chr4.2:39387776-39387795 None:intergenic 35.0%
TAGTTTCTGCATTTGTTTCC+TGG - chr4.2:39388395-39388414 None:intergenic 35.0%
TATATACGAGAGATTCTTGG+TGG + chr4.2:39392109-39392128 MS.gene003914:intron 35.0%
TATATTGGCAGCATAATTGG+AGG - chr4.2:39390030-39390049 None:intergenic 35.0%
TCGTGAAAATGTGGTCATTA+CGG - chr4.2:39387723-39387742 None:intergenic 35.0%
TGGCTATTTGTTTATCCAAG+GGG + chr4.2:39390515-39390534 MS.gene003914:CDS 35.0%
TGGTATATTGGCAGCATAAT+TGG - chr4.2:39390033-39390052 None:intergenic 35.0%
TGTTACTAAACACACCTTGT+AGG - chr4.2:39386732-39386751 None:intergenic 35.0%
TTCATAAGGAGTTGTGAACA+AGG - chr4.2:39390126-39390145 None:intergenic 35.0%
! AGCTTTAACAAACATGCAGA+AGG + chr4.2:39388908-39388927 MS.gene003914:intron 35.0%
! CAAAAAAAAGCGCATAATGG+CGG + chr4.2:39387688-39387707 MS.gene003914:intron 35.0%
! CACTTTTGGACAACTTTGAA+TGG + chr4.2:39391116-39391135 MS.gene003914:CDS 35.0%
! GAGCAATCTAAGATGCTTAT+TGG + chr4.2:39389972-39389991 MS.gene003914:CDS 35.0%
! GTAAGGTTAACAAGTGTTGT+AGG - chr4.2:39386653-39386672 None:intergenic 35.0%
! GTGCTGATAATGTAGTATGA+AGG + chr4.2:39387022-39387041 MS.gene003914:intron 35.0%
! TGCAAACCAAAATTTGTTCC+AGG - chr4.2:39387968-39387987 None:intergenic 35.0%
! TGCCACAAAGTTTAAAACAG+TGG + chr4.2:39387556-39387575 MS.gene003914:intron 35.0%
!! TCTAACGTGTCATTTGAGAA+CGG - chr4.2:39389722-39389741 None:intergenic 35.0%
!! TCTGATTTGAGTTGAATGTG+TGG - chr4.2:39392143-39392162 None:intergenic 35.0%
!!! TGCTACGTTTTAGAGAAGTA+AGG - chr4.2:39386670-39386689 None:intergenic 35.0%
!!! TTCCTGGTTTTACGTTTTTC+TGG - chr4.2:39388379-39388398 None:intergenic 35.0%
!!! TTTCATTTTTGGTACTGGCT+CGG + chr4.2:39386703-39386722 MS.gene003914:CDS 35.0%
AAAAATCGCGTGAATTAGGG+GGG + chr4.2:39387455-39387474 MS.gene003914:intron 40.0%
ACGTATAAGAGTCTGGACAA+TGG - chr4.2:39388304-39388323 None:intergenic 40.0%
AGAGCCAATTCAGTGCATAT+CGG + chr4.2:39392631-39392650 MS.gene003914:CDS 40.0%
AGGTAATCCAATGCTTCACT+CGG - chr4.2:39389417-39389436 None:intergenic 40.0%
AGTGCACGTGAATAAAATGG+TGG + chr4.2:39387609-39387628 MS.gene003914:intron 40.0%
ATGAGAGTCTTACTCACCAT+TGG - chr4.2:39390361-39390380 None:intergenic 40.0%
ATGATGATTGGGAATGTGTC+CGG + chr4.2:39391728-39391747 MS.gene003914:intron 40.0%
ATGCAATATTTGTGCAGAGC+TGG + chr4.2:39392206-39392225 MS.gene003914:intron 40.0%
CACTATGCCAATTTACATGG+TGG - chr4.2:39387593-39387612 None:intergenic 40.0%
CATACAGATTCTCCATCTCT+TGG + chr4.2:39388785-39388804 MS.gene003914:CDS 40.0%
CATATCGGCAACACATCAAA+GGG + chr4.2:39392646-39392665 MS.gene003914:CDS 40.0%
CGTGCTCTTGATTTCATGTT+TGG + chr4.2:39389758-39389777 MS.gene003914:CDS 40.0%
CTTGAACAAAGCGTATGCTA+TGG + chr4.2:39392335-39392354 MS.gene003914:CDS 40.0%
CTTGCGTCACTATTTGATTG+TGG - chr4.2:39390053-39390072 None:intergenic 40.0%
GAATCTGACAAACCACTCAA+GGG + chr4.2:39391839-39391858 MS.gene003914:intron 40.0%
GAGCTATGCTTCAAGGAATT+TGG + chr4.2:39389388-39389407 MS.gene003914:CDS 40.0%
GAGTAACACGTATAAGAGTC+TGG - chr4.2:39388311-39388330 None:intergenic 40.0%
GATTGCTCTTTGGTGAACTT+TGG - chr4.2:39389960-39389979 None:intergenic 40.0%
GCATCAGCTTAAATTCTCAC+TGG + chr4.2:39389690-39389709 MS.gene003914:CDS 40.0%
GCCACCACAATAAACCAAAA+TGG + chr4.2:39387506-39387525 MS.gene003914:intron 40.0%
GGCTATTTGTTTATCCAAGG+GGG + chr4.2:39390516-39390535 MS.gene003914:CDS 40.0%
GTAAGAGTTGCTGCCATTAT+TGG - chr4.2:39386629-39386648 None:intergenic 40.0%
GTACTCATCTTGTAAGGCTT+GGG - chr4.2:39389164-39389183 None:intergenic 40.0%
GTATGCTATGGTGATTCAAG+AGG + chr4.2:39392347-39392366 MS.gene003914:intron 40.0%
GTCATGGATCTTGAATACGA+TGG + chr4.2:39392067-39392086 MS.gene003914:intron 40.0%
GTGCACTATGCCAATTTACA+TGG - chr4.2:39387596-39387615 None:intergenic 40.0%
TAACTTGAATTCATGGCTGC+AGG + chr4.2:39389646-39389665 MS.gene003914:intron 40.0%
TACTAAACACACCTTGTAGG+AGG - chr4.2:39386729-39386748 None:intergenic 40.0%
TACTCATCTTGTAAGGCTTG+GGG - chr4.2:39389163-39389182 None:intergenic 40.0%
TAGCACCTGTGTTCCAATAA+TGG + chr4.2:39386613-39386632 MS.gene003914:CDS 40.0%
TAGTAAGAGTCAAGACACCA+AGG - chr4.2:39386592-39386611 None:intergenic 40.0%
TATACGAGAGATTCTTGGTG+GGG + chr4.2:39392111-39392130 MS.gene003914:intron 40.0%
TCCAACACTATCACTTGAAG+AGG + chr4.2:39390865-39390884 MS.gene003914:CDS 40.0%
TGAAAATGTGGTCATTACGG+CGG - chr4.2:39387720-39387739 None:intergenic 40.0%
TGAATTCCATGCTTGTGTCA+TGG + chr4.2:39392051-39392070 MS.gene003914:intron 40.0%
TGAGTATCCTTGAGATAGCT+TGG - chr4.2:39390080-39390099 None:intergenic 40.0%
TGATCTTCGGAATCATTGGA+TGG - chr4.2:39392014-39392033 None:intergenic 40.0%
TGATGCATAGACCAAGTTTG+TGG - chr4.2:39388098-39388117 None:intergenic 40.0%
TGTACTCATCTTGTAAGGCT+TGG - chr4.2:39389165-39389184 None:intergenic 40.0%
TTACTCACCATTGGACCAAT+TGG - chr4.2:39390352-39390371 None:intergenic 40.0%
TTTATGCAGCCATTGACAAC+AGG + chr4.2:39389891-39389910 MS.gene003914:CDS 40.0%
! AAACGTAGCAGTTTTCCCAA+AGG + chr4.2:39386680-39386699 MS.gene003914:CDS 40.0%
! ACTAAGCATGGTGTCTTTTG+CGG + chr4.2:39389923-39389942 MS.gene003914:CDS 40.0%
! ATTTGTGACCCTTTTCCACT+GGG + chr4.2:39389132-39389151 MS.gene003914:CDS 40.0%
! CATAGCATACGCTTTGTTCA+AGG - chr4.2:39392337-39392356 None:intergenic 40.0%
! CATCATGGTGTGAAAGTACA+AGG + chr4.2:39391079-39391098 MS.gene003914:CDS 40.0%
! CATGAAATCAAGAGCACGTT+CGG - chr4.2:39389756-39389775 None:intergenic 40.0%
! GAGCGGGTTTATAAAACCAA+TGG + chr4.2:39391938-39391957 MS.gene003914:CDS 40.0%
! GTGATACTATTTTCGTGAGC+AGG - chr4.2:39391458-39391477 None:intergenic 40.0%
!! TATGAAGGTGCTGCAAATGA+AGG + chr4.2:39387037-39387056 MS.gene003914:CDS 40.0%
!!! GCCATTTTGGTTTATTGTGG+TGG - chr4.2:39387510-39387529 None:intergenic 40.0%
!!! TTGGTTTTATAAACCCGCTC+TGG - chr4.2:39391938-39391957 None:intergenic 40.0%
AACAAGTGGACATGAGGAAG+AGG + chr4.2:39392601-39392620 MS.gene003914:CDS 45.0%
AACATGTTCGAGCCATAACC+AGG + chr4.2:39392370-39392389 MS.gene003914:intron 45.0%
AAGCGATCCAAGCTATCTCA+AGG + chr4.2:39390070-39390089 MS.gene003914:CDS 45.0%
AATTGGTATCCCGTTACGCT+CGG - chr4.2:39390335-39390354 None:intergenic 45.0%
ACCAAAAGCTCTCTGCCTAT+TGG + chr4.2:39391203-39391222 MS.gene003914:CDS 45.0%
ACTCTGGGTATCCGATCAAT+TGG - chr4.2:39392523-39392542 None:intergenic 45.0%
AGATGGATGCCGTATAAACC+TGG + chr4.2:39387947-39387966 MS.gene003914:intron 45.0%
ATGACGTAGTTGACCCTACA+TGG + chr4.2:39389289-39389308 MS.gene003914:intron 45.0%
CAAGATCCATGACACAAGCA+TGG - chr4.2:39392060-39392079 None:intergenic 45.0%
CAAGGGAGTGACCATTAAAG+AGG + chr4.2:39391856-39391875 MS.gene003914:intron 45.0%
CAAGGTAGAGGAGACATAGA+TGG - chr4.2:39386574-39386593 None:intergenic 45.0%
CAGTATTCTTGGCCAAGAGA+TGG - chr4.2:39388800-39388819 None:intergenic 45.0%
CAGTGGAAAAGGGTCACAAA+TGG - chr4.2:39389133-39389152 None:intergenic 45.0%
CATCTATGTCTCCTCTACCT+TGG + chr4.2:39386572-39386591 MS.gene003914:CDS 45.0%
CATGGAGGTTTCCACAAACT+TGG + chr4.2:39388084-39388103 MS.gene003914:intron 45.0%
GAACCCAAACTGTAAGAGTG+TGG - chr4.2:39389448-39389467 None:intergenic 45.0%
GAATACGATGGAACCTAGCT+TGG + chr4.2:39392079-39392098 MS.gene003914:intron 45.0%
GACAACAACAAGTGGACATG+AGG + chr4.2:39392595-39392614 MS.gene003914:CDS 45.0%
GACAAGGCCATGATCTAACT+AGG + chr4.2:39391774-39391793 MS.gene003914:intron 45.0%
GAGCCACACTCTTACAGTTT+GGG + chr4.2:39389442-39389461 MS.gene003914:CDS 45.0%
GCAAAAGACACCATGCTTAG+TGG - chr4.2:39389924-39389943 None:intergenic 45.0%
GCATATCGGCAACACATCAA+AGG + chr4.2:39392645-39392664 MS.gene003914:CDS 45.0%
GCCACTGTACTCATCTTGTA+AGG - chr4.2:39389170-39389189 None:intergenic 45.0%
GCCTTACAAGATGAGTACAG+TGG + chr4.2:39389166-39389185 MS.gene003914:CDS 45.0%
GGAATCGAGGACAAACCAAT+GGG + chr4.2:39392549-39392568 MS.gene003914:CDS 45.0%
GGAATCTGACAAACCACTCA+AGG + chr4.2:39391838-39391857 MS.gene003914:intron 45.0%
GGATACTCTCCTGTTGTCAA+TGG - chr4.2:39389903-39389922 None:intergenic 45.0%
GTTGCCGATATGCACTGAAT+TGG - chr4.2:39392638-39392657 None:intergenic 45.0%
TCAGTGTTGCACCTGATGAT+TGG - chr4.2:39389536-39389555 None:intergenic 45.0%
TCTGGTGCCTAGTTAGATCA+TGG - chr4.2:39391784-39391803 None:intergenic 45.0%
TGAGCCACACTCTTACAGTT+TGG + chr4.2:39389441-39389460 MS.gene003914:CDS 45.0%
TGATGATTGGGAATGTGTCC+GGG + chr4.2:39391729-39391748 MS.gene003914:intron 45.0%
TGCTGCCATTATTGGAACAC+AGG - chr4.2:39386621-39386640 None:intergenic 45.0%
TGGTTGCTTGAAAGAGCCAT+CGG - chr4.2:39391994-39392013 None:intergenic 45.0%
TGTTTATCCAAGGGGGATTC+AGG + chr4.2:39390523-39390542 MS.gene003914:CDS 45.0%
TTAATGGTCACTCCCTTGAG+TGG - chr4.2:39391854-39391873 None:intergenic 45.0%
! AAGAAATCTGGTTTCGCCGA+TGG + chr4.2:39391975-39391994 MS.gene003914:intron 45.0%
! ACCAATAGGCAGAGAGCTTT+TGG - chr4.2:39391207-39391226 None:intergenic 45.0%
! CATTTGTGACCCTTTTCCAC+TGG + chr4.2:39389131-39389150 MS.gene003914:CDS 45.0%
! CTAAGCATGGTGTCTTTTGC+GGG + chr4.2:39389924-39389943 MS.gene003914:CDS 45.0%
! GACAACTTTGAATGGCTTGC+TGG + chr4.2:39391124-39391143 MS.gene003914:CDS 45.0%
! GCCTCTTCAAGTGATAGTGT+TGG - chr4.2:39390869-39390888 None:intergenic 45.0%
! GCTGGATACACTAGACGTTT+TGG + chr4.2:39391142-39391161 MS.gene003914:CDS 45.0%
! GCTTTGTTCAAGGTCGACAA+TGG - chr4.2:39392327-39392346 None:intergenic 45.0%
! GTAAGAGTGTGGCTCATTGA+AGG - chr4.2:39389437-39389456 None:intergenic 45.0%
!! AGCTCTCTGCCTATTGGTTT+AGG + chr4.2:39391209-39391228 MS.gene003914:intron 45.0%
!! AGGAGAGTATCCACTAAGCA+TGG + chr4.2:39389911-39389930 MS.gene003914:CDS 45.0%
!! ATCACTTGAAGAGGCGCTTA+TGG + chr4.2:39390874-39390893 MS.gene003914:CDS 45.0%
!! CGGAAGAGGACAAAGTGTTT+TGG + chr4.2:39387060-39387079 MS.gene003914:CDS 45.0%
AGTAGTTCCTGAATCCCCCT+TGG - chr4.2:39390533-39390552 None:intergenic 50.0%
ATCGGATACCCAGAGTTGTG+GGG + chr4.2:39392527-39392546 MS.gene003914:CDS 50.0%
CGGGATACCAATTGGTCCAA+TGG + chr4.2:39390342-39390361 MS.gene003914:CDS 50.0%
CTATGCCGAGCTATGCTTCA+AGG + chr4.2:39389381-39389400 MS.gene003914:CDS 50.0%
CTTATGACAGCCGAGCGTAA+CGG + chr4.2:39390322-39390341 MS.gene003914:intron 50.0%
GAATGTGTCCGGGAAACCTT+GGG + chr4.2:39391739-39391758 MS.gene003914:intron 50.0%
GAGAGATTCTTGGTGGGGAA+TGG + chr4.2:39392116-39392135 MS.gene003914:intron 50.0%
GAGTCAAGACACCAAGGTAG+AGG - chr4.2:39386586-39386605 None:intergenic 50.0%
GATCGGATACCCAGAGTTGT+GGG + chr4.2:39392526-39392545 MS.gene003914:CDS 50.0%
GCAGAAGGAAAAGTGAGTGC+AGG + chr4.2:39388923-39388942 MS.gene003914:intron 50.0%
GGGAAGATCCCAGTGGAAAA+GGG - chr4.2:39389143-39389162 None:intergenic 50.0%
GGGAATCGAGGACAAACCAA+TGG + chr4.2:39392548-39392567 MS.gene003914:CDS 50.0%
GTGTGGCAGACAACAACAAG+TGG + chr4.2:39392587-39392606 MS.gene003914:CDS 50.0%
TGATCGGATACCCAGAGTTG+TGG + chr4.2:39392525-39392544 MS.gene003914:CDS 50.0%
TGGCTGCAGGCTTCACAAAA+TGG + chr4.2:39389659-39389678 MS.gene003914:intron 50.0%
TGGTTGTGTGAGGCGATGTA+AGG - chr4.2:39389475-39389494 None:intergenic 50.0%
TTATGACAGCCGAGCGTAAC+GGG + chr4.2:39390323-39390342 MS.gene003914:intron 50.0%
TTGGAGACCGAGTGAAGCAT+TGG + chr4.2:39389407-39389426 MS.gene003914:CDS 50.0%
! AGCAAGGAGTTGGTTGTGTG+AGG - chr4.2:39389485-39389504 None:intergenic 50.0%
! ATCGATTTCGCTGCTCGAGT+TGG + chr4.2:39392417-39392436 MS.gene003914:intron 50.0%
! GAGCGTAACGGGATACCAAT+TGG + chr4.2:39390334-39390353 MS.gene003914:CDS 50.0%
!! GAAGGTGCTGCAAATGAAGG+CGG + chr4.2:39387040-39387059 MS.gene003914:CDS 50.0%
!! TTCGCTGCTCGAGTTGGAAA+AGG + chr4.2:39392423-39392442 MS.gene003914:intron 50.0%
ACGTACAGGCTGCTTCACCT+TGG + chr4.2:39390495-39390514 MS.gene003914:intron 55.0%
CAGCTGCATGAGCAAGGAGT+TGG - chr4.2:39389495-39389514 None:intergenic 55.0%
CTCGATTCCCCCACAACTCT+GGG - chr4.2:39392538-39392557 None:intergenic 55.0%
GCTGCAAATGAAGGCGGAAG+AGG + chr4.2:39387046-39387065 MS.gene003914:CDS 55.0%
GGAATGTGTCCGGGAAACCT+TGG + chr4.2:39391738-39391757 MS.gene003914:intron 55.0%
GGGGAAGATCCCAGTGGAAA+AGG - chr4.2:39389144-39389163 None:intergenic 55.0%
TCGGATACCCAGAGTTGTGG+GGG + chr4.2:39392528-39392547 MS.gene003914:CDS 55.0%
TGACAGCAGCTGCATGAGCA+AGG - chr4.2:39389501-39389520 None:intergenic 55.0%
AGGCTTGGGGAAGATCCCAG+TGG - chr4.2:39389150-39389169 None:intergenic 60.0%
CCAGAGTTGTGGGGGAATCG+AGG + chr4.2:39392536-39392555 MS.gene003914:CDS 60.0%
CCGGGAAACCTTGGGAGAGA+CGG + chr4.2:39391747-39391766 MS.gene003914:intron 60.0%
CCGTCTCTCCCAAGGTTTCC+CGG - chr4.2:39391750-39391769 None:intergenic 60.0%
CCTCGATTCCCCCACAACTC+TGG - chr4.2:39392539-39392558 None:intergenic 60.0%
CGAGGACAAACCAATGGGCG+AGG + chr4.2:39392554-39392573 MS.gene003914:CDS 60.0%
GCACATTGCACCTCGCCCAT+TGG - chr4.2:39392567-39392586 None:intergenic 60.0%
GGGAGATATGGCACCAGAGC+GGG + chr4.2:39391922-39391941 MS.gene003914:CDS 60.0%
GGGGAGATATGGCACCAGAG+CGG + chr4.2:39391921-39391940 MS.gene003914:intron 60.0%
TGGGAGAGACGGAAGCGACA+AGG + chr4.2:39391758-39391777 MS.gene003914:intron 60.0%
! TGTCGCTTCCGTCTCTCCCA+AGG - chr4.2:39391758-39391777 None:intergenic 60.0%
!! TACTGGCTCGGCCTCCTACA+AGG + chr4.2:39386715-39386734 MS.gene003914:CDS 60.0%
GGCGAGGTGCAATGTGCGTG+TGG + chr4.2:39392570-39392589 MS.gene003914:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 39386557 39392679 39386557 ID=MS.gene003914
chr4.2 mRNA 39386557 39392679 39386557 ID=MS.gene003914.t1;Parent=MS.gene003914
chr4.2 exon 39386557 39386736 39386557 ID=MS.gene003914.t1.exon1;Parent=MS.gene003914.t1
chr4.2 CDS 39386557 39386736 39386557 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39387037 39387106 39387037 ID=MS.gene003914.t1.exon2;Parent=MS.gene003914.t1
chr4.2 CDS 39387037 39387106 39387037 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39387329 39387387 39387329 ID=MS.gene003914.t1.exon3;Parent=MS.gene003914.t1
chr4.2 CDS 39387329 39387387 39387329 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39388748 39388823 39388748 ID=MS.gene003914.t1.exon4;Parent=MS.gene003914.t1
chr4.2 CDS 39388748 39388823 39388748 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39388927 39389004 39388927 ID=MS.gene003914.t1.exon5;Parent=MS.gene003914.t1
chr4.2 CDS 39388927 39389004 39388927 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39389122 39389209 39389122 ID=MS.gene003914.t1.exon6;Parent=MS.gene003914.t1
chr4.2 CDS 39389122 39389209 39389122 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39389366 39389543 39389366 ID=MS.gene003914.t1.exon7;Parent=MS.gene003914.t1
chr4.2 CDS 39389366 39389543 39389366 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39389668 39389783 39389668 ID=MS.gene003914.t1.exon8;Parent=MS.gene003914.t1
chr4.2 CDS 39389668 39389783 39389668 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39389890 39390113 39389890 ID=MS.gene003914.t1.exon9;Parent=MS.gene003914.t1
chr4.2 CDS 39389890 39390113 39389890 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39390332 39390363 39390332 ID=MS.gene003914.t1.exon10;Parent=MS.gene003914.t1
chr4.2 CDS 39390332 39390363 39390332 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39390503 39390605 39390503 ID=MS.gene003914.t1.exon11;Parent=MS.gene003914.t1
chr4.2 CDS 39390503 39390605 39390503 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39390846 39390954 39390846 ID=MS.gene003914.t1.exon12;Parent=MS.gene003914.t1
chr4.2 CDS 39390846 39390954 39390846 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39391078 39391224 39391078 ID=MS.gene003914.t1.exon13;Parent=MS.gene003914.t1
chr4.2 CDS 39391078 39391224 39391078 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39391922 39391959 39391922 ID=MS.gene003914.t1.exon14;Parent=MS.gene003914.t1
chr4.2 CDS 39391922 39391959 39391922 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39392223 39392356 39392223 ID=MS.gene003914.t1.exon15;Parent=MS.gene003914.t1
chr4.2 CDS 39392223 39392356 39392223 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
chr4.2 exon 39392494 39392679 39392494 ID=MS.gene003914.t1.exon16;Parent=MS.gene003914.t1
chr4.2 CDS 39392494 39392679 39392494 ID=cds.MS.gene003914.t1;Parent=MS.gene003914.t1
Gene Sequence

>MS.gene003914

ATGGCAATCTATGGCCATCTATGTCTCCTCTACCTTGGTGTCTTGACTCTTACTATTAGCACCTGTGTTCCAATAATGGCAGCAACTCTTACTCCTACAACACTTGTTAACCTTACTTCTCTAAAACGTAGCAGTTTTCCCAAAGGTTTCATTTTTGGTACTGGCTCGGCCTCCTACAAGGTGTGTTTAGTAACATTTTGTATGTTATCAAACTTTTCATACCTTGAAAAACAATAAATTTAGAGATAGATATAATTCCATTTACCCACAATTATTTTTGTAAAAAATCATTTAATGTATGTTTTTAAATTTTGTAATGGTACATAGCAAAAACAAGCTTAATCAGTCAAAAATTTTGAACAAAATTCAATACTTAATGACCAAAGATTTAGGGATGAAGTGTATGGGTAATAGTATTAATGAAAGCTTGAGAATTGGGGGTTAATTAATAAGATATAATTTTGTGTGCTGATAATGTAGTATGAAGGTGCTGCAAATGAAGGCGGAAGAGGACAAAGTGTTTTGGATAAATATGCTCATGAACATCCAGGTATATTTCTTTATTTTCTGACTTTCTTTTCTTAATTATCTCAATTTGATGAATAATAAGCTGAATGAAAAATCCCTTCAAAAGTAAAATAACTTGAATGAAAAATAAAAGGTGCTTCATTTACATGTTTTGTTTTAATAAAAGCAAAATACATGTAGTAATTGCCTTATTATGCCTCTTCAATTTTATTTTATTTTGCCTAATTGGTGTAATTTCATGCAGAACAAATATTGGATGGAAGCAATGGAGATGTAGCTGTTGATCAGTATCATCGTTATAAGGTACATCCAATTTGATATAAAAGCAATCTCTTGACCTTGCAAAGTTTGCATTATTAATGCACTACAAAAAAATCGCGTGAATTAGGGGGGCAAAAATTTGTTTGTTACGACAGTTTTAGCCACCACAATAAACCAAAATGGCATTTTCAAAACTTTCTTAATTTTGCATGCCACAAAGTTTAAAACAGTGGTTTAAGAAGAACCACCATGTAAATTGGCATAGTGCACGTGAATAAAATGGTGGCTAATAGTTTGAATAAAACGGCAGTTTTAACCGCCATAATATACACTTTTCAGCAACAAAAAAAAGCGCATAATGGCGGTTTGATCCGCCGTAATGACCACATTTTCACGAAAACAGTTATGCATATAGCAGCAGTTTGAACCTCCGTAATGACCACATTTTTATGAAAAGAAAAATATGCGTATAGGGAAGACATTCTTGAATGATACAACAAAATCTGTTTAACAAGAAGCTAAAATAGACTCTATAAGACTATAACATTACCCTCTTGTGTTTTGTTTTCTGATCGGGCAAGAAACTTGTAATGATTCTCAAAGATGGATGCCGTATAAACCTGGAACAAATTTTGGTTTGCATGCAGATAAATCAAGAACTTTAGTATGCTAACAAATACTATTAAAATGTTTCCAAAATCAAACATTAAATATCTTCCCACACATGTTATTTATGAACATGGAGGTTTCCACAAACTTGGTCTATGCATCATTAGCCAAAAATATTTTTGAGAACTATAATTATTTATACGTCTTTTTCAATATTAATCTGGTAGTCACTACTCAAAACAAGAACAATAATATCTTCAAAGGAAGTCGGATAAAAAAATGATAATTTGACAGATCTGGATGCCCTAAATTTTTTTCACTTCTTTATAAGAGATTCGACTTCGGACCATTGTCCAGACTCTTATACGTGTTACTCATTTCTTTTTTATTTTTTTGGTGAATACCTCTTATTTGTACAAATCCAGAAAAACGTAAAACCAGGAAACAAATGCAGAAACTACTAGTACAACTAGAAACCAAGAAACCATTTATTTGTACAAAAAAAACATAACAACAAAAAAAAAAAAAATTAATCCAACCATTGTAAAATTTCACATGAAATGGAGTTTGATATAGGCTAAACATTATATAATCAATTATCGATATTTAAAGTTCAGAAAACTACTTGTACCAACAAAATAAAAAGTTCAGAAAACTATTGCATCAGTATCAAGTCAGAGATATAATATATCATTGTTTTGTATGAATTAAATTCAATCATATATTTTACCTTATGTGTATGCAATTTTTTTGTCAAGTATATGTGGTAACCATTATTTTCACATCTTAATAGGAAGATGTTGCAATCATGAAGTATATGAATACAGATGCATACAGATTCTCCATCTCTTGGCCAAGAATACTGCCAAGTAATATGAATTTATTCAAATCCTTTAATTCACTTAGAGTTTCATGTATAGGTGTGAATCTTTCATTTACATTAACTAATTTACAGCTTTAACAAACATGCAGAAGGAAAAGTGAGTGCAGGTATAAATCAAGAAGGAATCAAATATTACAACAATCTGATCAATGAGCTACTTGATAATGGTAATGCATACATACTTCACAAGTATATCATATTCATGAAGTTCATAATACTTTTTTTTTTTTACTAAATGATGTTCATAATCATAGTAATATAAATTGATGGAATTATTGATATAGGTCTGGTACCATTTGTGACCCTTTTCCACTGGGATCTTCCCCAAGCCTTACAAGATGAGTACAGTGGCTTCTTAAGCCCTTATATTATGTAAGTTGCATGACACAAATTTTCATTCAAGCAAGTATAATAATTTGATCGTTACGTGCATGATCCATGATAAAGCTTTATGACGTAGTTGACCCTACATGGTGATATATAGTTTGATTGCTGATGTTTTTGTTGTTATTTTCTATATATATGCAGAAATGATTTTCAAGACTATGCCGAGCTATGCTTCAAGGAATTTGGAGACCGAGTGAAGCATTGGATTACCTTCAATGAGCCACACTCTTACAGTTTGGGTTCAGAACCTTACATCGCCTCACACAACCAACTCCTTGCTCATGCAGCTGCTGTCAAACTTTATAGAACCAATCATCAGGTGCAACACTGAAGAACTTATACCTATTTTTTTTTCCTATGCATATTCAAATTTATTACTAATAAAAATCTTGTATTTGTTATGATTGTCCAAAACATTAATTAACTTGAATTCATGGCTGCAGGCTTCACAAAATGGTTCAATAGGCATCAGCTTAAATTCTCACTGGTCTCTGCCGTTCTCAAATGACACGTTAGATCATCAAGCTGCCGAACGTGCTCTTGATTTCATGTTTGGATGGTAATGTTGCATTTGTTCACAATTGTCCACAAAATCATGGATAAAGACATAATTGCGACTAATGTTATACTTCAATCTAGCTTCATAATTTATTTATTTTTTGCAGGTTTATGCAGCCATTGACAACAGGAGAGTATCCACTAAGCATGGTGTCTTTTGCGGGAAATCGTTTACCAAAGTTCACCAAAGAGCAATCTAAGATGCTTATTGGCTCATTTGATTTTATTGGAATCAATTACTACACCTCCAATTATGCTGCCAATATACCACAATCAAATAGTGACGCAAGCGATCCAAGCTATCTCAAGGATACTCATGTCAAATTTACAAGTAAGAATACCTTGTTCACAACTCCTTATGAAGAATTATACATAGTATATACATGCTGAGTTATATAAAATGAAAATGCATTAACTGATTAAATTGAAATAACCTTAAACCATTGATAGAAAAGTCAAAATGTGATACTTTCTTTTGATTTTTTATTCAATGAAAGAAGACAATTCCTTTATTTGATGTAAAATGTTTCTTGCTATGACTTATGACAGCCGAGCGTAACGGGATACCAATTGGTCCAATGGTGAGTAAGACTCTCATTCAGTTACTGTTATATCTGAGATATGAATTTGTGCGTGCGCATGTATTGAAAATTATACCAGATACTTTATTCTATGATTTGTTTGTTTGATGAATAACTAACAAAATAAATTTACGTACAGGCTGCTTCACCTTGGCTATTTGTTTATCCAAGGGGGATTCAGGAACTACTGTTGTACACAAAGACAAAGTATAACAATCCTTTGATTTACATAACAGAAAATGGTAATATTTTAGTTTTTTTTAAAATTTTTGATATGCATTTGCATCGTTTTTAAGATAAAATTCAAGTTACTATAAAACACACATTAATTTGTATATAAACCTTTTATATACTTAAGCTACTTAATCTTTGAGAACTCCTAATCTTATCTTATTCTTAAATCTCAATACATTGTTTACTTGTTTTTCTTCCTAATCAAATCAATAAACTAAAATTTTCAAATTTTAATATTTAAATTATAGGTATGGACGAGCTCAACGATCCAACACTATCACTTGAAGAGGCGCTTATGGATACTTATAGAATTGATTACTTTTATCGTCATCTTTATTATGTTTCATCTGCAATCAAGTAAATAGCAGCATATCTCTACTTATTAGATATTGAATCACATTATTTTCACACTCTAACCTTACTTAGTTTCCTTTTTTTAATCTCTAATCTATTATTATTTTTGACTTTTTTTTTGTTAAGGCATCATGGTGTGAAAGTACAAGGATATTTTGCATGGTCACTTTTGGACAACTTTGAATGGCTTGCTGGATACACTAGACGTTTTGGAATGAACTATGTTGATTACAATGATAATCTTAAAAGACACCAAAAGCTCTCTGCCTATTGGTTTAGGAACTTTCTTAAGAAACACTAGTGTTACAACTTGATGTATGTCATGATGATCCCCAATAATATGATATGAACTTGGTCATTAATCAAGAGCAACTTTAATTTTGAATTAGTTTCCTTAATTTATAAGTATCTATCTATATCTGAATTCCTGGTAAAATGGAACATAATATATCTGGAGACAAATGTTTGCACTAATTAGTTAAAAATAATGTGTTTTTGTTTATCCTGCTCACGAAAATAGTATCACGCTCACGTAAAAATGCATTATGAAGTTACGAAAGATATAAAAGAAGTATCAACATATAAATACAAATGTGTTACAGAATCAATTAAATTATATGCATATAGAACAATCTCAAATGTGTTTTGATTAGATTGAAGAGATATAACATACAACAATGATATCTCTTCAGAAAAATAAAAGTACAACAGTGATATATTATGTACACCTCTAATTTTTCTACACCGATTAAACAACTCATCTCGTTTCTATATGAATGATGATTGGGAATGTGTCCGGGAAACCTTGGGAGAGACGGAAGCGACAAGGCCATGATCTAACTAGGCACCAGAAGATTGTATGAATATTATGAAAGATTGTATGGAAGGAATCTGACAAACCACTCAAGGGAGTGACCATTAAAGAGGTTATGCAGATAGTAAATAATTTTGCTATCTTATAAAATTTTAGGGGAGATATGGCACCAGAGCGGGTTTATAAAACCAATGGTAAGAATGAGAAAGAAGAAATCTGGTTTCGCCGATGGCTCTTTCAAGCAACCATCCAATGATTCCGAAGATCAATAATATTGGTGGAGGGTGAATTCCATGCTTGTGTCATGGATCTTGAATACGATGGAACCTAGCTTGGACTCAAATATATACGAGAGATTCTTGGTGGGGAATGGACCACACATTCAACTCAAATCAGAATTGTCTGATTGGAAATAGTGGCATGAAAATTGTAAGATTGACATGCAATATTTGTGCAGAGCTGGATAAGAAGAGAGAAGAAGAGAATCTCCATCAATTTTTTACGGGTCTTGATGCAACAACATACAACACAGTCCGAACAAACATCTTAAGAACTGAACCATTGTCGACCTTGAACAAAGCGTATGCTATGGTGATTCAAGAGGAACATGTTCGAGCCATAACCAGGACAAATGAATAGAAGAGTGAACATATCGATTTCGCTGCTCGAGTTGGAAAAGGTCGAAACGAAAGTAAGCAGAAAATGTGTTGTGCTCTAATTGCTCCAAGCTAGATAATGATGCTGATATCTGCTTCCAATTGATCGGATACCCAGAGTTGTGGGGGAATCGAGGACAAACCAATGGGCGAGGTGCAATGTGCGTGTGGCAGACAACAACAAGTGGACATGAGGAAGAGGACAGATCAGAGCCAATTCAGTGCATATCGGCAACACATCAAAGGGAGAACAACTAG
Protein sequence

>MS.gene003914.t1

MAIYGHLCLLYLGVLTLTISTCVPIMAATLTPTTLVNLTSLKRSSFPKGFIFGTGSASYKYEGAANEGGRGQSVLDKYAHEHPEQILDGSNGDVAVDQYHRYKEDVAIMKYMNTDAYRFSISWPRILPKGKVSAGINQEGIKYYNNLINELLDNGLVPFVTLFHWDLPQALQDEYSGFLSPYIINDFQDYAELCFKEFGDRVKHWITFNEPHSYSLGSEPYIASHNQLLAHAAAVKLYRTNHQASQNGSIGISLNSHWSLPFSNDTLDHQAAERALDFMFGWFMQPLTTGEYPLSMVSFAGNRLPKFTKEQSKMLIGSFDFIGINYYTSNYAANIPQSNSDASDPSYLKDTHVKFTTERNGIPIGPMAASPWLFVYPRGIQELLLYTKTKYNNPLIYITENGMDELNDPTLSLEEALMDTYRIDYFYRHLYYVSSAIKHHGVKVQGYFAWSLLDNFEWLAGYTRRFGMNYVDYNDNLKRHQKLSAYWGDMAPERVYKTNELDKKREEENLHQFFTGLDATTYNTVRTNILRTEPLSTLNKAYAMLDNDADICFQLIGYPELWGNRGQTNGRGAMCVWQTTTSGHEEEDRSEPIQCISATHQRENN