Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004947.t1 | XP_013468838.1 | 98.3 | 414 | 7 | 0 | 1 | 414 | 1 | 414 | 2.10E-242 | 847.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004947.t1 | P14749 | 77.6 | 379 | 85 | 0 | 34 | 412 | 32 | 410 | 4.8e-179 | 628.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004947.t1 | A0A072VXV5 | 98.3 | 414 | 7 | 0 | 1 | 414 | 1 | 414 | 1.5e-242 | 847.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004947 | MS.gene013419 | PPI |
| MS.gene004947 | MS.gene87685 | PPI |
| MS.gene87684 | MS.gene004947 | PPI |
| MS.gene92763 | MS.gene004947 | PPI |
| MS.gene004947 | MS.gene27501 | PPI |
| MS.gene059347 | MS.gene004947 | PPI |
| MS.gene004947 | MS.gene049391 | PPI |
| MS.gene004947 | MS.gene92764 | PPI |
| MS.gene004947 | MS.gene036941 | PPI |
| MS.gene036942 | MS.gene004947 | PPI |
| MS.gene27500 | MS.gene004947 | PPI |
| MS.gene004947 | MS.gene06516 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004947.t1 | MTR_1g077480 | 98.309 | 414 | 7 | 0 | 1 | 414 | 1 | 414 | 0.0 | 842 |
| MS.gene004947.t1 | MTR_6g086625 | 90.097 | 414 | 35 | 2 | 1 | 414 | 1 | 408 | 0.0 | 778 |
| MS.gene004947.t1 | MTR_6g086575 | 87.198 | 414 | 46 | 1 | 1 | 414 | 1 | 407 | 0.0 | 751 |
| MS.gene004947.t1 | MTR_1g077520 | 80.440 | 409 | 75 | 3 | 3 | 411 | 4 | 407 | 0.0 | 696 |
| MS.gene004947.t1 | MTR_6g069140 | 76.804 | 388 | 89 | 1 | 24 | 411 | 33 | 419 | 0.0 | 636 |
| MS.gene004947.t1 | MTR_1g077520 | 79.464 | 336 | 64 | 3 | 3 | 338 | 4 | 334 | 0.0 | 567 |
| MS.gene004947.t1 | MTR_7g073640 | 59.564 | 413 | 154 | 4 | 1 | 411 | 6 | 407 | 0.0 | 519 |
| MS.gene004947.t1 | MTR_7g073650 | 63.881 | 371 | 132 | 2 | 43 | 411 | 36 | 406 | 0.0 | 515 |
| MS.gene004947.t1 | MTR_3g094160 | 56.802 | 419 | 170 | 5 | 3 | 411 | 8 | 425 | 1.25e-175 | 497 |
| MS.gene004947.t1 | MTR_1g078410 | 59.565 | 230 | 41 | 2 | 1 | 230 | 1 | 178 | 2.50e-88 | 266 |
| MS.gene004947.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 101 | 223 | 2.32e-39 | 140 |
| MS.gene004947.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 185 | 307 | 3.36e-38 | 140 |
| MS.gene004947.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 250 | 372 | 1.00e-37 | 140 |
| MS.gene004947.t1 | MTR_8g089725 | 25.053 | 471 | 234 | 17 | 58 | 412 | 38 | 505 | 2.02e-26 | 111 |
| MS.gene004947.t1 | MTR_8g089735 | 24.841 | 471 | 235 | 17 | 58 | 412 | 38 | 505 | 1.35e-25 | 108 |
| MS.gene004947.t1 | MTR_3g086580 | 27.174 | 368 | 174 | 13 | 43 | 319 | 25 | 389 | 4.33e-23 | 102 |
| MS.gene004947.t1 | MTR_2g096530 | 27.507 | 349 | 163 | 13 | 58 | 319 | 40 | 385 | 2.94e-22 | 99.8 |
| MS.gene004947.t1 | MTR_8g089745 | 25.287 | 348 | 173 | 12 | 58 | 320 | 38 | 383 | 1.20e-20 | 94.0 |
| MS.gene004947.t1 | MTR_8g089740 | 25.788 | 349 | 171 | 11 | 58 | 320 | 33 | 379 | 1.91e-20 | 94.0 |
| MS.gene004947.t1 | MTR_8g089745 | 25.287 | 348 | 173 | 12 | 58 | 320 | 38 | 383 | 2.04e-20 | 94.0 |
| MS.gene004947.t1 | MTR_3g086580 | 30.726 | 179 | 95 | 7 | 168 | 319 | 26 | 202 | 9.84e-14 | 73.2 |
| MS.gene004947.t1 | MTR_3g094180 | 48.611 | 72 | 34 | 1 | 324 | 392 | 7 | 78 | 6.76e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004947.t1 | AT5G08370 | 69.133 | 392 | 120 | 1 | 24 | 414 | 5 | 396 | 0.0 | 588 |
| MS.gene004947.t1 | AT5G08370 | 72.951 | 366 | 99 | 0 | 49 | 414 | 5 | 370 | 0.0 | 586 |
| MS.gene004947.t1 | AT5G08380 | 58.722 | 407 | 162 | 3 | 7 | 411 | 6 | 408 | 2.11e-180 | 508 |
| MS.gene004947.t1 | AT3G56310 | 57.710 | 428 | 164 | 6 | 1 | 412 | 4 | 430 | 2.54e-175 | 497 |
| MS.gene004947.t1 | AT3G56310 | 54.206 | 428 | 155 | 7 | 1 | 412 | 4 | 406 | 1.08e-156 | 448 |
| MS.gene004947.t1 | AT5G08380 | 59.554 | 314 | 124 | 1 | 7 | 320 | 6 | 316 | 2.78e-142 | 408 |
| MS.gene004947.t1 | AT3G26380 | 26.496 | 351 | 168 | 13 | 56 | 319 | 40 | 387 | 9.29e-23 | 100 |
| MS.gene004947.t1 | AT3G26380 | 26.420 | 352 | 169 | 13 | 55 | 319 | 39 | 387 | 2.09e-22 | 100 |
Find 104 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTGGCCTTGCTGCTTT+AGG | 0.151894 | 1.4:-63483826 | MS.gene004947:CDS |
| GGGTACAAATATATTAATTT+AGG | 0.200247 | 1.4:-63483805 | MS.gene004947:intron |
| TAGTTGATGCCAGAGATTTA+TGG | 0.239253 | 1.4:-63480738 | MS.gene004947:CDS |
| CAACTGGCCTTGCTGCTTTA+GGG | 0.247842 | 1.4:-63483825 | MS.gene004947:CDS |
| CTGGCATCAACTATAGTTTC+TGG | 0.257200 | 1.4:+63480748 | None:intergenic |
| ATGCCAAAACATTTGCTTCT+TGG | 0.258381 | 1.4:-63483179 | MS.gene004947:CDS |
| CCAACTATTTCCCACACTTT+TGG | 0.260055 | 1.4:+63482713 | None:intergenic |
| TGGAATAGCTGGAACCATTT+TGG | 0.262090 | 1.4:-63483991 | MS.gene004947:CDS |
| ACAAAGTAGCAGTGGTCTTA+TGG | 0.272566 | 1.4:-63480828 | MS.gene004947:CDS |
| CATTGATATCACAACCAAAA+TGG | 0.277961 | 1.4:+63483977 | None:intergenic |
| ATCGTGCCCATTTCAGCATT+TGG | 0.278804 | 1.4:-63482245 | MS.gene004947:CDS |
| GAGTACTTCCAAGTCCATTT+TGG | 0.279870 | 1.4:+63485375 | None:intergenic |
| TGCCAAAACATTTGCTTCTT+GGG | 0.296895 | 1.4:-63483178 | MS.gene004947:intron |
| AAGAGTTATATGTTCCAAAA+TGG | 0.309688 | 1.4:-63485389 | MS.gene004947:CDS |
| TCTACGGCTGCTCGTTTGTT+AGG | 0.320205 | 1.4:-63485455 | MS.gene004947:CDS |
| CAGGCGATATAGAAGATAAT+TGG | 0.322906 | 1.4:-63482683 | MS.gene004947:CDS |
| TCAACACAATCATTGGTTTC+GGG | 0.344023 | 1.4:-63480619 | MS.gene004947:CDS |
| CTCAACACAATCATTGGTTT+CGG | 0.346117 | 1.4:-63480620 | MS.gene004947:CDS |
| CTAATGCCCAAATGCTGAAA+TGG | 0.353093 | 1.4:+63482238 | None:intergenic |
| AGTTGATGCCAGAGATTTAT+GGG | 0.361924 | 1.4:-63480737 | MS.gene004947:CDS |
| TCGTGCCCATTTCAGCATTT+GGG | 0.362441 | 1.4:-63482244 | MS.gene004947:CDS |
| TTTAATAAAGCTTCACTCAT+TGG | 0.363260 | 1.4:+63482882 | None:intergenic |
| ACAATGATATTAGGGGAATA+TGG | 0.364125 | 1.4:-63483432 | MS.gene004947:intron |
| GAAAAGCAACAATGATTTAG+AGG | 0.374068 | 1.4:-63481906 | MS.gene004947:intron |
| TACCCAAGAAGCAAATGTTT+TGG | 0.374219 | 1.4:+63483176 | None:intergenic |
| TAAACGTATGCCTGGATCAT+TGG | 0.378772 | 1.4:-63483217 | MS.gene004947:CDS |
| CAACTATAGTTTCTGGTTCA+AGG | 0.392974 | 1.4:+63480755 | None:intergenic |
| TGTATGTTCTGACACCAAAA+AGG | 0.398154 | 1.4:-63480558 | MS.gene004947:CDS |
| AAATAGGCTCCTCTATTAGT+TGG | 0.398912 | 1.4:-63482123 | MS.gene004947:intron |
| TGAAGGAAACGTTGAAGCCT+TGG | 0.402252 | 1.4:+63483406 | None:intergenic |
| GCAGATAAACTTGGAGTTCA+AGG | 0.405868 | 1.4:-63481938 | MS.gene004947:intron |
| AGAGAAGAAGATCGGCCTTC+CGG | 0.409581 | 1.4:+63482857 | None:intergenic |
| AACGTTTCCTTCAGGAATCA+AGG | 0.411562 | 1.4:-63483396 | MS.gene004947:CDS |
| TTATAGATGCAAACGACAAA+TGG | 0.414952 | 1.4:-63482459 | MS.gene004947:CDS |
| GAAAGTTTAATCCGAGATAC+AGG | 0.426792 | 1.4:-63483955 | MS.gene004947:intron |
| TTGGGAGTTTATTCAGATGC+TGG | 0.430380 | 1.4:-63483338 | MS.gene004947:CDS |
| GTAGCACTCAACACAATCAT+TGG | 0.438786 | 1.4:-63480626 | MS.gene004947:intron |
| CATAGGAAAGGCTTGAAGTT+GGG | 0.440372 | 1.4:-63483356 | MS.gene004947:CDS |
| CTCTAGCTCATTATATTCAT+AGG | 0.449054 | 1.4:-63483373 | MS.gene004947:CDS |
| TGATGATCAGATGGAATAGC+TGG | 0.449121 | 1.4:-63484002 | MS.gene004947:intron |
| TTTCCAACTTCAAGCATGTC+AGG | 0.457946 | 1.4:+63482291 | None:intergenic |
| TTTGGTCATGCAGATAAACT+TGG | 0.458528 | 1.4:-63481947 | MS.gene004947:intron |
| AAACGTATGCCTGGATCATT+GGG | 0.461695 | 1.4:-63483216 | MS.gene004947:CDS |
| GATCCTGACATGCTTGAAGT+TGG | 0.469508 | 1.4:-63482294 | MS.gene004947:CDS |
| TAATGCCCAAATGCTGAAAT+GGG | 0.470549 | 1.4:+63482239 | None:intergenic |
| GCCGACGCAATGGTGTCAAC+TGG | 0.473046 | 1.4:-63483841 | MS.gene004947:CDS |
| GGAAATAGTTGGAGAACAAC+AGG | 0.473859 | 1.4:-63482702 | MS.gene004947:CDS |
| GACATGCTTGAAGTTGGAAA+TGG | 0.481080 | 1.4:-63482288 | MS.gene004947:CDS |
| TATTAGGGCAATGGCAAAGA+TGG | 0.482980 | 1.4:-63485534 | None:intergenic |
| CAGCATTTGGGCATTAGCTA+AGG | 0.494033 | 1.4:-63482232 | MS.gene004947:intron |
| TATGATAATTGTGAAAATAA+CGG | 0.494743 | 1.4:-63483027 | MS.gene004947:CDS |
| AAGGCTTCAACGTTTCCTTC+AGG | 0.495513 | 1.4:-63483404 | MS.gene004947:CDS |
| GAAGTTATTGCAGTAAATCA+AGG | 0.496776 | 1.4:-63482048 | MS.gene004947:intron |
| TATAGATGCAAACGACAAAT+GGG | 0.498323 | 1.4:-63482458 | MS.gene004947:CDS |
| TCATAGGAAAGGCTTGAAGT+TGG | 0.501081 | 1.4:-63483357 | MS.gene004947:CDS |
| TATATGTTCCAAAATGGACT+TGG | 0.505299 | 1.4:-63485383 | MS.gene004947:CDS |
| GAAGGAAACGTTGAAGCCTT+GGG | 0.511297 | 1.4:+63483407 | None:intergenic |
| TGGGAGTTTATTCAGATGCT+GGG | 0.511774 | 1.4:-63483337 | MS.gene004947:intron |
| CGCAACGTGGGCCAAAAGTG+TGG | 0.518962 | 1.4:-63482724 | MS.gene004947:CDS |
| ATGCAACAGTTACTGCGTCT+TGG | 0.519706 | 1.4:-63480789 | MS.gene004947:CDS |
| ATTTCATGTCCCAATGATCC+AGG | 0.521509 | 1.4:+63483207 | None:intergenic |
| AATAAAGCTTCACTCATTGG+TGG | 0.521866 | 1.4:+63482885 | None:intergenic |
| CCAAAAGTGTGGGAAATAGT+TGG | 0.526021 | 1.4:-63482713 | MS.gene004947:CDS |
| ACTTGTAGTAAACGTATGCC+TGG | 0.526377 | 1.4:-63483225 | MS.gene004947:CDS |
| AAACGAGCAGCCGTAGATGA+TGG | 0.527324 | 1.4:+63485461 | None:intergenic |
| GACAAATGGGCATCTTATGT+TGG | 0.534225 | 1.4:-63482445 | MS.gene004947:CDS |
| ATATTACATCCAACTAATAG+AGG | 0.536794 | 1.4:+63482114 | None:intergenic |
| ACGGAATAAGCGTTCGCGAA+AGG | 0.537756 | 1.4:-63483008 | MS.gene004947:intron |
| TCTTCTTCTCTATGTGTGAA+TGG | 0.540517 | 1.4:-63482845 | MS.gene004947:intron |
| TGCAAGTATTCCATCATCTA+CGG | 0.540982 | 1.4:-63485471 | MS.gene004947:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.541589 | 1.4:+63482421 | None:intergenic |
| GTTGCTTATCAATTCATATG+TGG | 0.544672 | 1.4:+63482074 | None:intergenic |
| CTTATGTTGGACCTGGAGGA+TGG | 0.547731 | 1.4:-63482432 | MS.gene004947:CDS |
| TGATAATGATACCTGTATCT+CGG | 0.559350 | 1.4:+63483944 | None:intergenic |
| ACTTGGAAGTACTCCTCCCA+TGG | 0.559923 | 1.4:-63485366 | MS.gene004947:CDS |
| GCTCATTATATTCATAGGAA+AGG | 0.565444 | 1.4:-63483368 | MS.gene004947:CDS |
| TGGATGTAATATTCAAGCAA+TGG | 0.566327 | 1.4:-63482103 | MS.gene004947:CDS |
| GCAACGTGGGCCAAAAGTGT+GGG | 0.570038 | 1.4:-63482723 | MS.gene004947:CDS |
| AGTGAAGCTTTATTAAACTC+CGG | 0.574235 | 1.4:-63482876 | MS.gene004947:CDS |
| ATGGGAAGATCCCGCAACGT+GGG | 0.575573 | 1.4:-63482736 | MS.gene004947:CDS |
| TTAGGGGAATATGGTTCCCA+AGG | 0.579443 | 1.4:-63483423 | MS.gene004947:intron |
| CTACGGTGACAGGTATGGGC+AGG | 0.580772 | 1.4:-63480865 | MS.gene004947:intron |
| CTTCTCTAGAGTTGACACAT+TGG | 0.582087 | 1.4:+63485418 | None:intergenic |
| TGGGCATCTTATGTTGGACC+TGG | 0.585587 | 1.4:-63482439 | MS.gene004947:CDS |
| ACTGCGTCTTGGTCTGACAT+AGG | 0.588981 | 1.4:-63480778 | MS.gene004947:CDS |
| GGAACTTAATCGAGACTCAA+AGG | 0.593389 | 1.4:-63483641 | MS.gene004947:intron |
| ATATAGAAGATAATTGGAAG+AGG | 0.597307 | 1.4:-63482677 | MS.gene004947:intron |
| CTTGGAAGTACTCCTCCCAT+GGG | 0.604196 | 1.4:-63485365 | MS.gene004947:CDS |
| AAGCTTTATTAAACTCCGGA+AGG | 0.609339 | 1.4:-63482872 | MS.gene004947:CDS |
| GCCAGTTGACACCATTGCGT+CGG | 0.609381 | 1.4:+63483840 | None:intergenic |
| GTTGGACCTGGAGGATGGAA+TGG | 0.614536 | 1.4:-63482427 | MS.gene004947:intron |
| GCTAGAGCCTTGATTCCTGA+AGG | 0.622037 | 1.4:+63483389 | None:intergenic |
| ATGAGGGTAGCTTACCCCAT+GGG | 0.623626 | 1.4:+63485350 | None:intergenic |
| ATGCTTGAAGTTGGAAATGG+AGG | 0.629089 | 1.4:-63482285 | MS.gene004947:CDS |
| TCACACATAGAGAAGAAGAT+CGG | 0.630428 | 1.4:+63482849 | None:intergenic |
| TAGGGCAATGGCAAAGATGG+TGG | 0.636732 | 1.4:-63485531 | None:intergenic |
| GATGGGAAGATCCCGCAACG+TGG | 0.636775 | 1.4:-63482737 | MS.gene004947:CDS |
| GCATCTTATGTTGGACCTGG+AGG | 0.651560 | 1.4:-63482436 | MS.gene004947:CDS |
| ATTTGTACCCTAAAGCAGCA+AGG | 0.672262 | 1.4:+63483818 | None:intergenic |
| AGGGTAGCTTACCCCATGGG+AGG | 0.673038 | 1.4:+63485353 | None:intergenic |
| ATGGGCACGATATTCCTCTG+TGG | 0.732691 | 1.4:+63482257 | None:intergenic |
| TGATGCCAGAGATTTATGGG+AGG | 0.734083 | 1.4:-63480734 | MS.gene004947:intron |
| AAATGGAGGCATGACCACAG+AGG | 0.748734 | 1.4:-63482271 | MS.gene004947:CDS |
| TTGGAAGTACTCCTCCCATG+GGG | 0.749529 | 1.4:-63485364 | MS.gene004947:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATTGAAATATAAAAAT+AGG | + | chr1.4:63483532-63483551 | None:intergenic | 10.0% |
| !! | AAGAAATTAAACAAATAAAT+GGG | + | chr1.4:63482497-63482516 | None:intergenic | 10.0% |
| !! | AGAAAAATTTAAATCAATAT+TGG | + | chr1.4:63483007-63483026 | None:intergenic | 10.0% |
| !! | TATATAAATTGAAAATTCTA+TGG | + | chr1.4:63481742-63481761 | None:intergenic | 10.0% |
| !! | TTTCATATGTATTAAAAATT+AGG | - | chr1.4:63483165-63483184 | MS.gene004947:intron | 10.0% |
| !!! | AAATTATGTTTTTTTATTAG+TGG | + | chr1.4:63481679-63481698 | None:intergenic | 10.0% |
| !!! | AATTATTCTTTATTCTTTTA+TGG | - | chr1.4:63482323-63482342 | MS.gene004947:intron | 10.0% |
| !!! | ATGGTTAATTTTATTTTAAA+AGG | + | chr1.4:63481723-63481742 | None:intergenic | 10.0% |
| !!! | ATTGATTTAAATTTTTCTTT+AGG | - | chr1.4:63483009-63483028 | MS.gene004947:CDS | 10.0% |
| !!! | ATTTAAACACTTTTTTTTTT+TGG | + | chr1.4:63484908-63484927 | None:intergenic | 10.0% |
| !!! | GATTTTTTAATAAATTGTAT+GGG | - | chr1.4:63484981-63485000 | MS.gene004947:intron | 10.0% |
| !!! | TGGTTAATTTTATTTTAAAA+GGG | + | chr1.4:63481722-63481741 | None:intergenic | 10.0% |
| !!! | TTGATTTAAATTTTTCTTTA+GGG | - | chr1.4:63483010-63483029 | MS.gene004947:CDS | 10.0% |
| !! | AAAAAAAAAGCAAAGAAATA+TGG | - | chr1.4:63481470-63481489 | MS.gene004947:intron | 15.0% |
| !! | AAAACTTTAATATACATTGA+TGG | + | chr1.4:63484885-63484904 | None:intergenic | 15.0% |
| !! | AAATACAATCAAATTAAAAG+AGG | - | chr1.4:63484525-63484544 | MS.gene004947:intron | 15.0% |
| !! | AGAAATTAAACAAATAAATG+GGG | + | chr1.4:63482496-63482515 | None:intergenic | 15.0% |
| !! | CTAAAAAAAGAAAAGAAAAT+TGG | + | chr1.4:63480779-63480798 | None:intergenic | 15.0% |
| !! | CTATAATTTGAAAAATGAAT+GGG | + | chr1.4:63481513-63481532 | None:intergenic | 15.0% |
| !! | GAAGAAATTAAACAAATAAA+TGG | + | chr1.4:63482498-63482517 | None:intergenic | 15.0% |
| !! | TATATCATATATATAATCCT+AGG | - | chr1.4:63482974-63482993 | MS.gene004947:intron | 15.0% |
| !! | TATGATAATTGTGAAAATAA+CGG | - | chr1.4:63483049-63483068 | MS.gene004947:intron | 15.0% |
| !! | TATTATAATTTAAATCTACG+TGG | - | chr1.4:63480968-63480987 | MS.gene004947:intron | 15.0% |
| !! | TCAAACAGAATAAAATATAA+AGG | + | chr1.4:63484213-63484232 | None:intergenic | 15.0% |
| !! | TCTATAATTTGAAAAATGAA+TGG | + | chr1.4:63481514-63481533 | None:intergenic | 15.0% |
| !! | TTGAAGTATGAAAAAAAATT+AGG | + | chr1.4:63485057-63485076 | None:intergenic | 15.0% |
| !!! | ATGAAATTGGTTTTTTATTA+AGG | - | chr1.4:63481853-63481872 | MS.gene004947:intron | 15.0% |
| !!! | ATGGATATAATTTGTTTTTT+TGG | + | chr1.4:63481588-63481607 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTAGATGATTGT+TGG | - | chr1.4:63482410-63482429 | MS.gene004947:intron | 15.0% |
| !!! | GGATTTTTTAATAAATTGTA+TGG | - | chr1.4:63484980-63484999 | MS.gene004947:intron | 15.0% |
| !!! | TAACTTTTTAAAAAACGAAA+AGG | - | chr1.4:63481276-63481295 | MS.gene004947:intron | 15.0% |
| !!! | TAATTCTTTTCTAAAATGAA+GGG | - | chr1.4:63483316-63483335 | MS.gene004947:intron | 15.0% |
| !!! | TGGGTTTTATTTTATATAAA+GGG | + | chr1.4:63484327-63484346 | None:intergenic | 15.0% |
| !!! | TTAATTCTTTTCTAAAATGA+AGG | - | chr1.4:63483315-63483334 | MS.gene004947:intron | 15.0% |
| !!! | TTGGGTTTTATTTTATATAA+AGG | + | chr1.4:63484328-63484347 | None:intergenic | 15.0% |
| !!! | TTTGTTATTTTTCAGATTTT+GGG | + | chr1.4:63484598-63484617 | None:intergenic | 15.0% |
| !!! | TTTTATATAAAGGGTAAATT+TGG | + | chr1.4:63484318-63484337 | None:intergenic | 15.0% |
| !!! | TTTTGTTATTTTTCAGATTT+TGG | + | chr1.4:63484599-63484618 | None:intergenic | 15.0% |
| !!! | TTTTTCATGAAAATAATTTG+AGG | + | chr1.4:63481333-63481352 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAGATGATTGTT+GGG | - | chr1.4:63482411-63482430 | MS.gene004947:intron | 15.0% |
| !! | AAAAAACCAATTTCATCATT+CGG | + | chr1.4:63481849-63481868 | None:intergenic | 20.0% |
| !! | AAAGTGATTTATAATTTAGG+TGG | - | chr1.4:63481770-63481789 | MS.gene004947:intron | 20.0% |
| !! | AATTATAGGAGTAATGATAA+TGG | - | chr1.4:63481148-63481167 | MS.gene004947:intron | 20.0% |
| !! | AGATAATATAAGATAAGATG+TGG | - | chr1.4:63481793-63481812 | MS.gene004947:intron | 20.0% |
| !! | ATCTAAGTTGTAAACATAAT+AGG | + | chr1.4:63482171-63482190 | None:intergenic | 20.0% |
| !! | GAAATTAAACAAATAAATGG+GGG | + | chr1.4:63482495-63482514 | None:intergenic | 20.0% |
| !! | GGGTACAAATATATTAATTT+AGG | - | chr1.4:63482271-63482290 | MS.gene004947:CDS | 20.0% |
| !! | GTCAAAGTGATTTATAATTT+AGG | - | chr1.4:63481767-63481786 | MS.gene004947:intron | 20.0% |
| !! | TCATACTTCAATTAAAAAGA+TGG | - | chr1.4:63485066-63485085 | MS.gene004947:intron | 20.0% |
| !! | TTATAGCAAAATCTAGTATT+AGG | - | chr1.4:63483727-63483746 | MS.gene004947:intron | 20.0% |
| !! | TTATATGTGTAACTGTTATT+TGG | - | chr1.4:63483753-63483772 | MS.gene004947:intron | 20.0% |
| !! | TTCAAAAGAATCAAAGATTT+GGG | + | chr1.4:63484694-63484713 | None:intergenic | 20.0% |
| !! | TTTCAAAAGAATCAAAGATT+TGG | + | chr1.4:63484695-63484714 | None:intergenic | 20.0% |
| !!! | AATTATTTTCATGAAAAACG+AGG | - | chr1.4:63481335-63481354 | MS.gene004947:intron | 20.0% |
| !!! | AATTCTTTTCTAAAATGAAG+GGG | - | chr1.4:63483317-63483336 | MS.gene004947:intron | 20.0% |
| !!! | CTATTTGTATTGGTTTAAAT+AGG | - | chr1.4:63483937-63483956 | MS.gene004947:intron | 20.0% |
| !!! | TAAAAATCATATGCTTCTTT+TGG | - | chr1.4:63484111-63484130 | MS.gene004947:intron | 20.0% |
| !!! | TACTTTTCTTTTTTGTTGAA+AGG | - | chr1.4:63481910-63481929 | MS.gene004947:CDS | 20.0% |
| !!! | TAGATTTTGCTATAAATGTA+AGG | + | chr1.4:63483722-63483741 | None:intergenic | 20.0% |
| !!! | TCTTTTTTAAGAAACAAAGT+CGG | - | chr1.4:63480839-63480858 | MS.gene004947:CDS | 20.0% |
| !!! | TTTTTTATTAAGGAGAATGA+TGG | - | chr1.4:63481863-63481882 | MS.gene004947:intron | 20.0% |
| ! | AAATAGGAAAGTAATTCTTG+AGG | + | chr1.4:63483516-63483535 | None:intergenic | 25.0% |
| ! | AAATTAGGATCCTTATAAGT+TGG | + | chr1.4:63485042-63485061 | None:intergenic | 25.0% |
| ! | AAGAGTTATATGTTCCAAAA+TGG | - | chr1.4:63480687-63480706 | MS.gene004947:intron | 25.0% |
| ! | AAGTTGTAAACATAATAGGT+TGG | + | chr1.4:63482167-63482186 | None:intergenic | 25.0% |
| ! | AATTAGGATCCTTATAAGTT+GGG | + | chr1.4:63485041-63485060 | None:intergenic | 25.0% |
| ! | AGTTGTAAACATAATAGGTT+GGG | + | chr1.4:63482166-63482185 | None:intergenic | 25.0% |
| ! | ATATAGAAGATAATTGGAAG+AGG | - | chr1.4:63483399-63483418 | MS.gene004947:CDS | 25.0% |
| ! | ATATTACATCCAACTAATAG+AGG | + | chr1.4:63483965-63483984 | None:intergenic | 25.0% |
| ! | ATGAAAAATGGATAAGAATG+AGG | + | chr1.4:63480746-63480765 | None:intergenic | 25.0% |
| ! | ATGGCATGAATCAAATAATT+AGG | + | chr1.4:63484627-63484646 | None:intergenic | 25.0% |
| ! | CAAAAAATCAAGAGAATTGA+TGG | - | chr1.4:63484721-63484740 | MS.gene004947:intron | 25.0% |
| ! | CATATGAAACATGTAAGTAT+TGG | + | chr1.4:63483154-63483173 | None:intergenic | 25.0% |
| ! | GGATATATCTCAATGAAAAA+TGG | + | chr1.4:63480758-63480777 | None:intergenic | 25.0% |
| ! | GTTAAAAGAGACATTGTAAA+AGG | + | chr1.4:63483464-63483483 | None:intergenic | 25.0% |
| ! | TAATTATTTGATTCATGCCA+TGG | - | chr1.4:63484626-63484645 | MS.gene004947:intron | 25.0% |
| ! | TAGACTTACTATCAATTCAA+TGG | + | chr1.4:63480998-63481017 | None:intergenic | 25.0% |
| ! | TAGAGTTTCTTACAACTTAT+AGG | - | chr1.4:63484235-63484254 | MS.gene004947:intron | 25.0% |
| ! | TAGTACTTAATTTATGTGCA+AGG | - | chr1.4:63480873-63480892 | MS.gene004947:intron | 25.0% |
| ! | TATCATTACTCCTATAATTC+AGG | + | chr1.4:63481147-63481166 | None:intergenic | 25.0% |
| ! | TCAAAATCATATCATTGACA+TGG | + | chr1.4:63482391-63482410 | None:intergenic | 25.0% |
| ! | TGAAAAATGGATAAGAATGA+GGG | + | chr1.4:63480745-63480764 | None:intergenic | 25.0% |
| ! | TTAACGCATTAAATTGTACT+TGG | - | chr1.4:63482764-63482783 | MS.gene004947:intron | 25.0% |
| ! | TTAATAAATTGTATGGGTGA+AGG | - | chr1.4:63484987-63485006 | MS.gene004947:intron | 25.0% |
| ! | TTATACATATGATGATCAGA+TGG | - | chr1.4:63482065-63482084 | MS.gene004947:CDS | 25.0% |
| ! | TTCAATTAAAAAGATGGATC+TGG | - | chr1.4:63485072-63485091 | MS.gene004947:intron | 25.0% |
| ! | TTTAATAAAGCTTCACTCAT+TGG | + | chr1.4:63483197-63483216 | None:intergenic | 25.0% |
| ! | TTTCACATAATCAAAACCTT+AGG | + | chr1.4:63485422-63485441 | None:intergenic | 25.0% |
| ! | TTTGAGGAACAAATGTTATA+TGG | + | chr1.4:63481317-63481336 | None:intergenic | 25.0% |
| !! | AAAGTGTTTAAATGCTATGT+GGG | - | chr1.4:63484915-63484934 | MS.gene004947:intron | 25.0% |
| !! | AACTAGGAATATGGAAATTT+TGG | - | chr1.4:63484941-63484960 | MS.gene004947:intron | 25.0% |
| !! | ATTGAATTGATAGTAAGTCT+AGG | - | chr1.4:63480997-63481016 | MS.gene004947:intron | 25.0% |
| !! | CTATACCTTTTAAACAACAA+AGG | + | chr1.4:63482537-63482556 | None:intergenic | 25.0% |
| !! | CTCTTTTAACAACATAATTG+AGG | - | chr1.4:63483474-63483493 | MS.gene004947:intron | 25.0% |
| !! | CTTTTCCTAAAGATTTCTTT+TGG | - | chr1.4:63481098-63481117 | MS.gene004947:intron | 25.0% |
| !! | GGTACTTTAAGTTAATTGTT+GGG | + | chr1.4:63484297-63484316 | None:intergenic | 25.0% |
| !! | GTACTTTAAGTTAATTGTTG+GGG | + | chr1.4:63484296-63484315 | None:intergenic | 25.0% |
| !! | TGGTACTTTAAGTTAATTGT+TGG | + | chr1.4:63484298-63484317 | None:intergenic | 25.0% |
| !! | TGTCGTTTAACTATTTGTAT+TGG | - | chr1.4:63483927-63483946 | MS.gene004947:intron | 25.0% |
| !! | TTGATTTTGTCCGTTAATAT+TGG | - | chr1.4:63481184-63481203 | MS.gene004947:intron | 25.0% |
| !!! | AAAAGTGTTTAAATGCTATG+TGG | - | chr1.4:63484914-63484933 | MS.gene004947:intron | 25.0% |
| !!! | AATATGGAAATTTTGGCAAA+AGG | - | chr1.4:63484948-63484967 | MS.gene004947:intron | 25.0% |
| !!! | ATATGGAAATTTTGGCAAAA+GGG | - | chr1.4:63484949-63484968 | MS.gene004947:intron | 25.0% |
| !!! | ATGGAGTACTGTTTTTTTTA+AGG | + | chr1.4:63481124-63481143 | None:intergenic | 25.0% |
| !!! | CAACAATCATAATTTTTCAG+AGG | + | chr1.4:63482606-63482625 | None:intergenic | 25.0% |
| !!! | CTTTGTTGTTTAAAAGGTAT+AGG | - | chr1.4:63482535-63482554 | MS.gene004947:intron | 25.0% |
| !!! | CTTTTCCTTTGTTGTTTAAA+AGG | - | chr1.4:63482529-63482548 | MS.gene004947:intron | 25.0% |
| !!! | CTTTTTTAAGAAACAAAGTC+GGG | - | chr1.4:63480840-63480859 | MS.gene004947:CDS | 25.0% |
| !!! | GAAACCTTTTTCTAAGATTT+GGG | - | chr1.4:63484752-63484771 | MS.gene004947:intron | 25.0% |
| !!! | GTTTTAACATTTTTTTCGCT+TGG | + | chr1.4:63481361-63481380 | None:intergenic | 25.0% |
| !!! | TATGCATAACATTTCTAGTA+AGG | + | chr1.4:63483686-63483705 | None:intergenic | 25.0% |
| !!! | TATTTTTCAGATTTTGGGTT+TGG | + | chr1.4:63484593-63484612 | None:intergenic | 25.0% |
| !!! | TGAAACCTTTTTCTAAGATT+TGG | - | chr1.4:63484751-63484770 | MS.gene004947:intron | 25.0% |
| !!! | TGCTACTTTGTTTTTACTAA+GGG | + | chr1.4:63485239-63485258 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGTTACAGAAAGA+TGG | + | chr1.4:63481574-63481593 | None:intergenic | 25.0% |
| AAAATCAAGAGAATTGATGG+TGG | - | chr1.4:63484724-63484743 | MS.gene004947:intron | 30.0% | |
| AAACGAAAAGGAAAATTGCA+TGG | - | chr1.4:63481288-63481307 | MS.gene004947:intron | 30.0% | |
| AAGTATATATCTCCTCACTA+TGG | + | chr1.4:63481895-63481914 | None:intergenic | 30.0% | |
| AAGTGTTTAAATGCTATGTG+GGG | - | chr1.4:63484916-63484935 | MS.gene004947:intron | 30.0% | |
| ACAATGATATTAGGGGAATA+TGG | - | chr1.4:63482644-63482663 | MS.gene004947:intron | 30.0% | |
| AGATGTTCACAAAAGCAAAA+TGG | + | chr1.4:63481823-63481842 | None:intergenic | 30.0% | |
| ATATCATTGACATGGTAATC+TGG | + | chr1.4:63482383-63482402 | None:intergenic | 30.0% | |
| ATTACTCCTATAATTCAGGA+TGG | + | chr1.4:63481143-63481162 | None:intergenic | 30.0% | |
| CACAACTTAATAGAAAGCTA+CGG | - | chr1.4:63485194-63485213 | MS.gene004947:intron | 30.0% | |
| CATTGATATCACAACCAAAA+TGG | + | chr1.4:63482102-63482121 | None:intergenic | 30.0% | |
| GAAAAGCAACAATGATTTAG+AGG | - | chr1.4:63484170-63484189 | MS.gene004947:intron | 30.0% | |
| GAAGTTATTGCAGTAAATCA+AGG | - | chr1.4:63484028-63484047 | MS.gene004947:intron | 30.0% | |
| GATGTTCACAAAAGCAAAAT+GGG | + | chr1.4:63481822-63481841 | None:intergenic | 30.0% | |
| GCATGTATATAGTACAGAAA+TGG | + | chr1.4:63485140-63485159 | None:intergenic | 30.0% | |
| GCTCATTATATTCATAGGAA+AGG | - | chr1.4:63482708-63482727 | MS.gene004947:CDS | 30.0% | |
| GGTTTGTGACAATGATATTA+GGG | - | chr1.4:63482636-63482655 | MS.gene004947:intron | 30.0% | |
| GTAAAATGTCCCAACTTATA+AGG | - | chr1.4:63485029-63485048 | MS.gene004947:intron | 30.0% | |
| GTCTCAAATTTGATTCTTCT+CGG | - | chr1.4:63481231-63481250 | MS.gene004947:intron | 30.0% | |
| GTGTGAAAGAAAAAGAAAGA+TGG | + | chr1.4:63481607-63481626 | None:intergenic | 30.0% | |
| GTTGCTTATCAATTCATATG+TGG | + | chr1.4:63484005-63484024 | None:intergenic | 30.0% | |
| GTTGTAAACATAATAGGTTG+GGG | + | chr1.4:63482165-63482184 | None:intergenic | 30.0% | |
| GTTTGTGACAATGATATTAG+GGG | - | chr1.4:63482637-63482656 | MS.gene004947:intron | 30.0% | |
| TAAGGCCAAAAGAAATCTTT+AGG | + | chr1.4:63481106-63481125 | None:intergenic | 30.0% | |
| TAGTAAAAACAAAGTAGCAG+TGG | - | chr1.4:63485240-63485259 | MS.gene004947:intron | 30.0% | |
| TATAGATGCAAACGACAAAT+GGG | - | chr1.4:63483618-63483637 | MS.gene004947:intron | 30.0% | |
| TCATTGGATTACTCATAATC+TGG | - | chr1.4:63484652-63484671 | MS.gene004947:intron | 30.0% | |
| TGGATGTAATATTCAAGCAA+TGG | - | chr1.4:63483973-63483992 | MS.gene004947:CDS | 30.0% | |
| TTATAGATGCAAACGACAAA+TGG | - | chr1.4:63483617-63483636 | MS.gene004947:intron | 30.0% | |
| ! | CAAAGTCATTTAAGTTCCTA+AGG | - | chr1.4:63485403-63485422 | MS.gene004947:CDS | 30.0% |
| ! | CTCTAGCTCATTATATTCAT+AGG | - | chr1.4:63482703-63482722 | MS.gene004947:CDS | 30.0% |
| ! | GATCTGGAACAACAAAAAAA+TGG | - | chr1.4:63485088-63485107 | MS.gene004947:intron | 30.0% |
| ! | GATGGTTAGCTATTTAAGTT+CGG | + | chr1.4:63484867-63484886 | None:intergenic | 30.0% |
| ! | TATATGTTCCAAAATGGACT+TGG | - | chr1.4:63480693-63480712 | MS.gene004947:intron | 30.0% |
| ! | TATTAACGGACAAAATCAAG+TGG | + | chr1.4:63481183-63481202 | None:intergenic | 30.0% |
| ! | TCAATATTGGTTAACAACCT+AGG | + | chr1.4:63482994-63483013 | None:intergenic | 30.0% |
| ! | TGATAATGATACCTGTATCT+CGG | + | chr1.4:63482135-63482154 | None:intergenic | 30.0% |
| ! | TGGTTTGTGACAATGATATT+AGG | - | chr1.4:63482635-63482654 | MS.gene004947:intron | 30.0% |
| !! | AGTGAAGCTTTATTAAACTC+CGG | - | chr1.4:63483200-63483219 | MS.gene004947:CDS | 30.0% |
| !! | CGCGAAAGGTATTTAAAATA+TGG | - | chr1.4:63483082-63483101 | MS.gene004947:intron | 30.0% |
| !! | TATGGAAATTTTGGCAAAAG+GGG | - | chr1.4:63484950-63484969 | MS.gene004947:intron | 30.0% |
| !!! | CTGCTACTTTGTTTTTACTA+AGG | + | chr1.4:63485240-63485259 | None:intergenic | 30.0% |
| !!! | GAAAAGTATTTTGCCACATT+AGG | + | chr1.4:63481084-63481103 | None:intergenic | 30.0% |
| !!! | GCTACTTTGTTTTTACTAAG+GGG | + | chr1.4:63485238-63485257 | None:intergenic | 30.0% |
| !!! | GTTTTTTTATTAGTGGTCTG+AGG | + | chr1.4:63481672-63481691 | None:intergenic | 30.0% |
| !!! | TTTTCTAAAATGAAGGGGAT+GGG | - | chr1.4:63483322-63483341 | MS.gene004947:intron | 30.0% |
| !!! | TTTTTTAGATGATTGTTGGG+CGG | - | chr1.4:63482414-63482433 | MS.gene004947:intron | 30.0% |
| AAAAATGTATCCCGACCATA+TGG | - | chr1.4:63481386-63481405 | MS.gene004947:intron | 35.0% | |
| AAAGCCACCATATTTCCATA+TGG | + | chr1.4:63481404-63481423 | None:intergenic | 35.0% | |
| AAATAGGCTCCTCTATTAGT+TGG | - | chr1.4:63483953-63483972 | MS.gene004947:intron | 35.0% | |
| AAGATTAGATGGGAGTGATT+AGG | - | chr1.4:63484787-63484806 | MS.gene004947:intron | 35.0% | |
| AATAAAGCTTCACTCATTGG+TGG | + | chr1.4:63483194-63483213 | None:intergenic | 35.0% | |
| AGATCCCAAGCCAATATTAA+CGG | + | chr1.4:63481197-63481216 | None:intergenic | 35.0% | |
| AGTACTCCATCCTGAATTAT+AGG | - | chr1.4:63481134-63481153 | MS.gene004947:intron | 35.0% | |
| ATCATTGTCACAAACCAATC+AGG | + | chr1.4:63482632-63482651 | None:intergenic | 35.0% | |
| ATGCCAAAACATTTGCTTCT+TGG | - | chr1.4:63482897-63482916 | MS.gene004947:intron | 35.0% | |
| CAGGCGATATAGAAGATAAT+TGG | - | chr1.4:63483393-63483412 | MS.gene004947:CDS | 35.0% | |
| CTATAATAGAAGTCATGCTG+AGG | + | chr1.4:63483603-63483622 | None:intergenic | 35.0% | |
| CTCACCCAAATCTTAGAAAA+AGG | + | chr1.4:63484759-63484778 | None:intergenic | 35.0% | |
| GAAAGTTTAATCCGAGATAC+AGG | - | chr1.4:63482121-63482140 | MS.gene004947:intron | 35.0% | |
| TAAGTTAATTGTTGGGGTGA+AGG | + | chr1.4:63484290-63484309 | None:intergenic | 35.0% | |
| TAAGTTGTGTGCAAAAACCA+TGG | + | chr1.4:63485183-63485202 | None:intergenic | 35.0% | |
| TAATCACTCCCATCTAATCT+TGG | + | chr1.4:63484788-63484807 | None:intergenic | 35.0% | |
| TAATGCCCAAATGCTGAAAT+GGG | + | chr1.4:63483840-63483859 | None:intergenic | 35.0% | |
| TATAGTACTCCATCCTAATG+TGG | - | chr1.4:63481068-63481087 | MS.gene004947:intron | 35.0% | |
| TATGATTGTTGACACCTGAT+TGG | - | chr1.4:63482615-63482634 | MS.gene004947:intron | 35.0% | |
| TCACACATAGAGAAGAAGAT+CGG | + | chr1.4:63483230-63483249 | None:intergenic | 35.0% | |
| TCTTCTTCTCTATGTGTGAA+TGG | - | chr1.4:63483231-63483250 | MS.gene004947:CDS | 35.0% | |
| TCTTGACCGAATGATGAAAT+TGG | - | chr1.4:63481840-63481859 | MS.gene004947:intron | 35.0% | |
| TGATGGAATTATCCATAGTG+AGG | - | chr1.4:63481880-63481899 | MS.gene004947:intron | 35.0% | |
| TGCAAGTATTCCATCATCTA+CGG | - | chr1.4:63480605-63480624 | MS.gene004947:CDS | 35.0% | |
| TGCCAAAACATTTGCTTCTT+GGG | - | chr1.4:63482898-63482917 | MS.gene004947:intron | 35.0% | |
| TGTATGTTCTGACACCAAAA+AGG | - | chr1.4:63485518-63485537 | MS.gene004947:CDS | 35.0% | |
| TTAAGAAACAAAGTCGGGTA+TGG | - | chr1.4:63480845-63480864 | MS.gene004947:CDS | 35.0% | |
| TTTGGCAAAAGGGGTAAAAT+TGG | - | chr1.4:63484959-63484978 | MS.gene004947:intron | 35.0% | |
| TTTGGTCATGCAGATAAACT+TGG | - | chr1.4:63484129-63484148 | MS.gene004947:intron | 35.0% | |
| ! | AGTATTTTGCCACATTAGGA+TGG | + | chr1.4:63481080-63481099 | None:intergenic | 35.0% |
| ! | AGTTGATGCCAGAGATTTAT+GGG | - | chr1.4:63485339-63485358 | MS.gene004947:intron | 35.0% |
| ! | ATGGGTGAAGGTATAATTGT+AGG | - | chr1.4:63484999-63485018 | MS.gene004947:intron | 35.0% |
| ! | ATGGTGAGTTGAATTGATCA+TGG | - | chr1.4:63483250-63483269 | MS.gene004947:intron | 35.0% |
| ! | TACCCAAGAAGCAAATGTTT+TGG | + | chr1.4:63482903-63482922 | None:intergenic | 35.0% |
| ! | TAGTTGATGCCAGAGATTTA+TGG | - | chr1.4:63485338-63485357 | MS.gene004947:intron | 35.0% |
| ! | TCTAAGATTTGGGTGAGAAT+CGG | - | chr1.4:63484762-63484781 | MS.gene004947:intron | 35.0% |
| ! | TGGGTGAAGGTATAATTGTA+GGG | - | chr1.4:63485000-63485019 | MS.gene004947:intron | 35.0% |
| ! | TTTGTCCGTTAATATTGGCT+TGG | - | chr1.4:63481189-63481208 | MS.gene004947:intron | 35.0% |
| ! | TTTTACCTCCCATAAATCTC+TGG | + | chr1.4:63485350-63485369 | None:intergenic | 35.0% |
| !! | AAGCTTTATTAAACTCCGGA+AGG | - | chr1.4:63483204-63483223 | MS.gene004947:CDS | 35.0% |
| !! | AATCGAGACTCAAAGGTATT+TGG | - | chr1.4:63482442-63482461 | MS.gene004947:CDS | 35.0% |
| !! | CAACTATAGTTTCTGGTTCA+AGG | + | chr1.4:63485324-63485343 | None:intergenic | 35.0% |
| !! | CGAACGTTTTGAGTAAAGAA+GGG | + | chr1.4:63484423-63484442 | None:intergenic | 35.0% |
| !! | CTCAACACAATCATTGGTTT+CGG | - | chr1.4:63485456-63485475 | MS.gene004947:CDS | 35.0% |
| !! | TCAACACAATCATTGGTTTC+GGG | - | chr1.4:63485457-63485476 | MS.gene004947:CDS | 35.0% |
| !! | TCGAACGTTTTGAGTAAAGA+AGG | + | chr1.4:63484424-63484443 | None:intergenic | 35.0% |
| !! | TTAATATTGGCTTGGGATCT+TGG | - | chr1.4:63481197-63481216 | MS.gene004947:intron | 35.0% |
| !! | TTGTCCGTTAATATTGGCTT+GGG | - | chr1.4:63481190-63481209 | MS.gene004947:intron | 35.0% |
| !!! | CTTTTCTAAAATGAAGGGGA+TGG | - | chr1.4:63483321-63483340 | MS.gene004947:intron | 35.0% |
| !!! | TATTATTTTAGCCGACGCAA+TGG | - | chr1.4:63482225-63482244 | MS.gene004947:intron | 35.0% |
| AAAAAAGGTGGGGTGTGATT+GGG | + | chr1.4:63484346-63484365 | None:intergenic | 40.0% | |
| AAACGTATGCCTGGATCATT+GGG | - | chr1.4:63482860-63482879 | MS.gene004947:CDS | 40.0% | |
| AACGTTTCCTTCAGGAATCA+AGG | - | chr1.4:63482680-63482699 | MS.gene004947:CDS | 40.0% | |
| AATCCAACAATGTGCAGAGA+AGG | + | chr1.4:63484484-63484503 | None:intergenic | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | - | chr1.4:63482851-63482870 | MS.gene004947:CDS | 40.0% | |
| AGAATCGGCCAAGATTAGAT+GGG | - | chr1.4:63484777-63484796 | MS.gene004947:intron | 40.0% | |
| AGGTATAATTGTAGGGTGCA+AGG | - | chr1.4:63485007-63485026 | MS.gene004947:intron | 40.0% | |
| ATCCAACAATGTGCAGAGAA+GGG | + | chr1.4:63484483-63484502 | None:intergenic | 40.0% | |
| ATCCCGACCATATGGAAATA+TGG | - | chr1.4:63481394-63481413 | MS.gene004947:intron | 40.0% | |
| ATGCTTGAAGTTGGAAATGG+AGG | - | chr1.4:63483791-63483810 | MS.gene004947:intron | 40.0% | |
| ATTCATGCCATGGCTTTCAT+TGG | - | chr1.4:63484636-63484655 | MS.gene004947:intron | 40.0% | |
| ATTTCATGTCCCAATGATCC+AGG | + | chr1.4:63482872-63482891 | None:intergenic | 40.0% | |
| ATTTGTACCCTAAAGCAGCA+AGG | + | chr1.4:63482261-63482280 | None:intergenic | 40.0% | |
| CACCATATTTCCATATGGTC+GGG | + | chr1.4:63481399-63481418 | None:intergenic | 40.0% | |
| CATAGGAAAGGCTTGAAGTT+GGG | - | chr1.4:63482720-63482739 | MS.gene004947:CDS | 40.0% | |
| CCACCATATTTCCATATGGT+CGG | + | chr1.4:63481400-63481419 | None:intergenic | 40.0% | |
| CTAATGCCCAAATGCTGAAA+TGG | + | chr1.4:63483841-63483860 | None:intergenic | 40.0% | |
| CTGGCATCAACTATAGTTTC+TGG | + | chr1.4:63485331-63485350 | None:intergenic | 40.0% | |
| GACAAATGGGCATCTTATGT+TGG | - | chr1.4:63483631-63483650 | MS.gene004947:intron | 40.0% | |
| GACATGCTTGAAGTTGGAAA+TGG | - | chr1.4:63483788-63483807 | MS.gene004947:intron | 40.0% | |
| GAGTAATCCAATGAAAGCCA+TGG | + | chr1.4:63484646-63484665 | None:intergenic | 40.0% | |
| GCAGATAAACTTGGAGTTCA+AGG | - | chr1.4:63484138-63484157 | MS.gene004947:intron | 40.0% | |
| GGAAATAGTTGGAGAACAAC+AGG | - | chr1.4:63483374-63483393 | MS.gene004947:CDS | 40.0% | |
| GGAACTTAATCGAGACTCAA+AGG | - | chr1.4:63482435-63482454 | MS.gene004947:CDS | 40.0% | |
| GTAGCACTCAACACAATCAT+TGG | - | chr1.4:63485450-63485469 | MS.gene004947:CDS | 40.0% | |
| GTGAATTGGGAATTGCAAGA+AGG | - | chr1.4:63484554-63484573 | MS.gene004947:intron | 40.0% | |
| TAAACGTATGCCTGGATCAT+TGG | - | chr1.4:63482859-63482878 | MS.gene004947:CDS | 40.0% | |
| TAAATAAGTGACCGTTCTCG+TGG | - | chr1.4:63481020-63481039 | MS.gene004947:intron | 40.0% | |
| TAATAGAAAGCTACGGTGAC+AGG | - | chr1.4:63485201-63485220 | MS.gene004947:intron | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | + | chr1.4:63483658-63483677 | None:intergenic | 40.0% | |
| TCATAGGAAAGGCTTGAAGT+TGG | - | chr1.4:63482719-63482738 | MS.gene004947:CDS | 40.0% | |
| TGATGATCAGATGGAATAGC+TGG | - | chr1.4:63482074-63482093 | MS.gene004947:CDS | 40.0% | |
| TGGGAGTTTATTCAGATGCT+GGG | - | chr1.4:63482739-63482758 | MS.gene004947:CDS | 40.0% | |
| TTACTGTTTGCCATGCGAAA+AGG | + | chr1.4:63484397-63484416 | None:intergenic | 40.0% | |
| TTAGATGGGAGTGATTAGGT+AGG | - | chr1.4:63484791-63484810 | MS.gene004947:intron | 40.0% | |
| TTGGGAGTTTATTCAGATGC+TGG | - | chr1.4:63482738-63482757 | MS.gene004947:CDS | 40.0% | |
| TTTCCAACTTCAAGCATGTC+AGG | + | chr1.4:63483788-63483807 | None:intergenic | 40.0% | |
| ! | ACAAAGTAGCAGTGGTCTTA+TGG | - | chr1.4:63485248-63485267 | MS.gene004947:intron | 40.0% |
| ! | AGGTATAAATGTAGGGGTGT+AGG | + | chr1.4:63484270-63484289 | None:intergenic | 40.0% |
| ! | CCAAAAGTGTGGGAAATAGT+TGG | - | chr1.4:63483363-63483382 | MS.gene004947:CDS | 40.0% |
| ! | CCAACTATTTCCCACACTTT+TGG | + | chr1.4:63483366-63483385 | None:intergenic | 40.0% |
| ! | GAGTACTTCCAAGTCCATTT+TGG | + | chr1.4:63480704-63480723 | None:intergenic | 40.0% |
| ! | GGGGTGAAGGTATAAATGTA+GGG | + | chr1.4:63484277-63484296 | None:intergenic | 40.0% |
| ! | GGGTGAAGGTATAAATGTAG+GGG | + | chr1.4:63484276-63484295 | None:intergenic | 40.0% |
| ! | GGTATAAATGTAGGGGTGTA+GGG | + | chr1.4:63484269-63484288 | None:intergenic | 40.0% |
| ! | TGGAATAGCTGGAACCATTT+TGG | - | chr1.4:63482085-63482104 | MS.gene004947:CDS | 40.0% |
| ! | TGGGGTGAAGGTATAAATGT+AGG | + | chr1.4:63484278-63484297 | None:intergenic | 40.0% |
| ! | TTGTGCGTTTTCCGGAAAAA+AGG | + | chr1.4:63484361-63484380 | None:intergenic | 40.0% |
| !! | CTTCTCTAGAGTTGACACAT+TGG | + | chr1.4:63480661-63480680 | None:intergenic | 40.0% |
| AAAGCTACGGTGACAGGTAT+GGG | - | chr1.4:63485207-63485226 | MS.gene004947:intron | 45.0% | |
| AACCCTTCTCTGCACATTGT+TGG | - | chr1.4:63484478-63484497 | MS.gene004947:intron | 45.0% | |
| AAGGCTTCAACGTTTCCTTC+AGG | - | chr1.4:63482672-63482691 | MS.gene004947:intron | 45.0% | |
| AATGCTATGTGGGGTGAACT+AGG | - | chr1.4:63484925-63484944 | MS.gene004947:intron | 45.0% | |
| ATCGTGCCCATTTCAGCATT+TGG | - | chr1.4:63483831-63483850 | MS.gene004947:CDS | 45.0% | |
| ATGCAACAGTTACTGCGTCT+TGG | - | chr1.4:63485287-63485306 | MS.gene004947:intron | 45.0% | |
| CAGCATTTGGGCATTAGCTA+AGG | - | chr1.4:63483844-63483863 | MS.gene004947:intron | 45.0% | |
| CCGACCATATGGAAATATGG+TGG | - | chr1.4:63481397-63481416 | MS.gene004947:intron | 45.0% | |
| GAAAAAAGGTGGGGTGTGAT+TGG | + | chr1.4:63484347-63484366 | None:intergenic | 45.0% | |
| GAAGGAAACGTTGAAGCCTT+GGG | + | chr1.4:63482672-63482691 | None:intergenic | 45.0% | |
| GAGAATCGGCCAAGATTAGA+TGG | - | chr1.4:63484776-63484795 | MS.gene004947:intron | 45.0% | |
| GATCCTGACATGCTTGAAGT+TGG | - | chr1.4:63483782-63483801 | MS.gene004947:intron | 45.0% | |
| TCGTGCCCATTTCAGCATTT+GGG | - | chr1.4:63483832-63483851 | MS.gene004947:CDS | 45.0% | |
| TGAAGGAAACGTTGAAGCCT+TGG | + | chr1.4:63482673-63482692 | None:intergenic | 45.0% | |
| TGATGCCAGAGATTTATGGG+AGG | - | chr1.4:63485342-63485361 | MS.gene004947:intron | 45.0% | |
| TGCACGTACACATTATGCCA+TGG | - | chr1.4:63485163-63485182 | MS.gene004947:intron | 45.0% | |
| TGTGGGGTGAACTAGGAATA+TGG | - | chr1.4:63484932-63484951 | MS.gene004947:intron | 45.0% | |
| TGTTTGCCATGCGAAAAGGT+GGG | + | chr1.4:63484393-63484412 | None:intergenic | 45.0% | |
| TTAGGGGAATATGGTTCCCA+AGG | - | chr1.4:63482653-63482672 | MS.gene004947:intron | 45.0% | |
| ! | CGTTTTCCGGAAAAAAGGTG+GGG | + | chr1.4:63484356-63484375 | None:intergenic | 45.0% |
| ! | GCGTTTTCCGGAAAAAAGGT+GGG | + | chr1.4:63484357-63484376 | None:intergenic | 45.0% |
| ! | GTGAACACTTGTGCGTTTTC+CGG | + | chr1.4:63484369-63484388 | None:intergenic | 45.0% |
| ! | TGCGTTTTCCGGAAAAAAGG+TGG | + | chr1.4:63484358-63484377 | None:intergenic | 45.0% |
| !!! | ATCACACCCCACCTTTTTTC+CGG | - | chr1.4:63484347-63484366 | MS.gene004947:intron | 45.0% |
| AAACGAGCAGCCGTAGATGA+TGG | + | chr1.4:63480618-63480637 | None:intergenic | 50.0% | |
| AATGAGGGTAGCTTACCCCA+TGG | + | chr1.4:63480730-63480749 | None:intergenic | 50.0% | |
| ACGGAATAAGCGTTCGCGAA+AGG | - | chr1.4:63483068-63483087 | MS.gene004947:intron | 50.0% | |
| ACTGCGTCTTGGTCTGACAT+AGG | - | chr1.4:63485298-63485317 | MS.gene004947:intron | 50.0% | |
| AGAGAAGAAGATCGGCCTTC+CGG | + | chr1.4:63483222-63483241 | None:intergenic | 50.0% | |
| ATGAGGGTAGCTTACCCCAT+GGG | + | chr1.4:63480729-63480748 | None:intergenic | 50.0% | |
| ATGGGCACGATATTCCTCTG+TGG | + | chr1.4:63483822-63483841 | None:intergenic | 50.0% | |
| CTGTTTGCCATGCGAAAAGG+TGG | + | chr1.4:63484394-63484413 | None:intergenic | 50.0% | |
| CTTATGTTGGACCTGGAGGA+TGG | - | chr1.4:63483644-63483663 | MS.gene004947:CDS | 50.0% | |
| GAAAGCTACGGTGACAGGTA+TGG | - | chr1.4:63485206-63485225 | MS.gene004947:intron | 50.0% | |
| GCATCTTATGTTGGACCTGG+AGG | - | chr1.4:63483640-63483659 | MS.gene004947:intron | 50.0% | |
| GCTAGAGCCTTGATTCCTGA+AGG | + | chr1.4:63482690-63482709 | None:intergenic | 50.0% | |
| GTTTGCCATGCGAAAAGGTG+GGG | + | chr1.4:63484392-63484411 | None:intergenic | 50.0% | |
| TCTACGGCTGCTCGTTTGTT+AGG | - | chr1.4:63480621-63480640 | MS.gene004947:CDS | 50.0% | |
| TGGGCATCTTATGTTGGACC+TGG | - | chr1.4:63483637-63483656 | MS.gene004947:intron | 50.0% | |
| TTTGCCATGCGAAAAGGTGG+GGG | + | chr1.4:63484391-63484410 | None:intergenic | 50.0% | |
| ! | AAATGGAGGCATGACCACAG+AGG | - | chr1.4:63483805-63483824 | MS.gene004947:intron | 50.0% |
| !! | ACTTGGAAGTACTCCTCCCA+TGG | - | chr1.4:63480710-63480729 | MS.gene004947:intron | 50.0% |
| !! | CAACTGGCCTTGCTGCTTTA+GGG | - | chr1.4:63482251-63482270 | MS.gene004947:CDS | 50.0% |
| !! | CTTGGAAGTACTCCTCCCAT+GGG | - | chr1.4:63480711-63480730 | MS.gene004947:intron | 50.0% |
| !! | TCAACTGGCCTTGCTGCTTT+AGG | - | chr1.4:63482250-63482269 | MS.gene004947:CDS | 50.0% |
| !! | TTGGAAGTACTCCTCCCATG+GGG | - | chr1.4:63480712-63480731 | MS.gene004947:intron | 50.0% |
| ATGGGAAGATCCCGCAACGT+GGG | - | chr1.4:63483340-63483359 | MS.gene004947:CDS | 55.0% | |
| GCCAGTTGACACCATTGCGT+CGG | + | chr1.4:63482239-63482258 | None:intergenic | 55.0% | |
| GGCTGACTGAGGGTGGAATT+TGG | - | chr1.4:63481041-63481060 | MS.gene004947:intron | 55.0% | |
| GTTGGACCTGGAGGATGGAA+TGG | - | chr1.4:63483649-63483668 | MS.gene004947:CDS | 55.0% | |
| ! | ACACTTTTGGCCCACGTTGC+GGG | + | chr1.4:63483353-63483372 | None:intergenic | 55.0% |
| ! | CACACTTTTGGCCCACGTTG+CGG | + | chr1.4:63483354-63483373 | None:intergenic | 55.0% |
| ! | GCAACGTGGGCCAAAAGTGT+GGG | - | chr1.4:63483353-63483372 | MS.gene004947:CDS | 55.0% |
| ! | TTCACCCCCACCTTTTCGCA+TGG | - | chr1.4:63484384-63484403 | MS.gene004947:intron | 55.0% |
| ACCGTTCTCGTGGCTGACTG+AGG | - | chr1.4:63481030-63481049 | MS.gene004947:intron | 60.0% | |
| AGGGTAGCTTACCCCATGGG+AGG | + | chr1.4:63480726-63480745 | None:intergenic | 60.0% | |
| CCCTCAGTCAGCCACGAGAA+CGG | + | chr1.4:63481034-63481053 | None:intergenic | 60.0% | |
| CCGTTCTCGTGGCTGACTGA+GGG | - | chr1.4:63481031-63481050 | MS.gene004947:intron | 60.0% | |
| CGCAACGTGGGCCAAAAGTG+TGG | - | chr1.4:63483352-63483371 | MS.gene004947:CDS | 60.0% | |
| CTACGGTGACAGGTATGGGC+AGG | - | chr1.4:63485211-63485230 | MS.gene004947:intron | 60.0% | |
| GATGGGAAGATCCCGCAACG+TGG | - | chr1.4:63483339-63483358 | MS.gene004947:CDS | 60.0% | |
| TTCTCGTGGCTGACTGAGGG+TGG | - | chr1.4:63481034-63481053 | MS.gene004947:intron | 60.0% | |
| ! | GCCGACGCAATGGTGTCAAC+TGG | - | chr1.4:63482235-63482254 | MS.gene004947:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 63480552 | 63485546 | 63480552 | ID=MS.gene004947 |
| chr1.4 | mRNA | 63480552 | 63485546 | 63480552 | ID=MS.gene004947.t1;Parent=MS.gene004947 |
| chr1.4 | exon | 63485365 | 63485546 | 63485365 | ID=MS.gene004947.t1.exon1;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63485365 | 63485546 | 63485365 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483956 | 63484014 | 63483956 | ID=MS.gene004947.t1.exon2;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483956 | 63484014 | 63483956 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483806 | 63483862 | 63483806 | ID=MS.gene004947.t1.exon3;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483806 | 63483862 | 63483806 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483642 | 63483676 | 63483642 | ID=MS.gene004947.t1.exon4;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483642 | 63483676 | 63483642 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483338 | 63483441 | 63483338 | ID=MS.gene004947.t1.exon5;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483338 | 63483441 | 63483338 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483179 | 63483254 | 63483179 | ID=MS.gene004947.t1.exon6;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483179 | 63483254 | 63483179 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63483009 | 63483067 | 63483009 | ID=MS.gene004947.t1.exon7;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63483009 | 63483067 | 63483009 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63482846 | 63482911 | 63482846 | ID=MS.gene004947.t1.exon8;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63482846 | 63482911 | 63482846 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63482678 | 63482761 | 63482678 | ID=MS.gene004947.t1.exon9;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63482678 | 63482761 | 63482678 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63482428 | 63482492 | 63482428 | ID=MS.gene004947.t1.exon10;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63482428 | 63482492 | 63482428 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63482233 | 63482315 | 63482233 | ID=MS.gene004947.t1.exon11;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63482233 | 63482315 | 63482233 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63482049 | 63482139 | 63482049 | ID=MS.gene004947.t1.exon12;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63482049 | 63482139 | 63482049 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63481907 | 63481956 | 63481907 | ID=MS.gene004947.t1.exon13;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63481907 | 63481956 | 63481907 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63480735 | 63480875 | 63480735 | ID=MS.gene004947.t1.exon14;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63480735 | 63480875 | 63480735 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| chr1.4 | exon | 63480552 | 63480644 | 63480552 | ID=MS.gene004947.t1.exon15;Parent=MS.gene004947.t1 |
| chr1.4 | CDS | 63480552 | 63480644 | 63480552 | ID=cds.MS.gene004947.t1;Parent=MS.gene004947.t1 |
| Gene Sequence |
| Protein sequence |
