Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92763.t1 | XP_013449264.1 | 94.5 | 401 | 19 | 2 | 1 | 399 | 10 | 409 | 4.50E-226 | 793.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92763.t1 | Q9FT97 | 74.7 | 399 | 100 | 1 | 1 | 399 | 13 | 410 | 3.1e-183 | 642.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92763.t1 | A0A072U1H6 | 94.5 | 401 | 19 | 2 | 1 | 399 | 10 | 409 | 3.3e-226 | 793.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene92763 | 0.801186 | 1.01E-48 | -1.69E-46 |
| MS.gene049378 | MS.gene92763 | 0.866183 | 3.43E-65 | -1.69E-46 |
| MS.gene049669 | MS.gene92763 | 0.808151 | 3.56E-50 | -1.69E-46 |
| MS.gene049993 | MS.gene92763 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene050139 | MS.gene92763 | 0.838375 | 2.99E-57 | -1.69E-46 |
| MS.gene050168 | MS.gene92763 | 0.824908 | 6.26E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene92763 | 0.852735 | 3.80E-61 | -1.69E-46 |
| MS.gene050227 | MS.gene92763 | 0.846567 | 2.00E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene92763 | 0.851044 | 1.15E-60 | -1.69E-46 |
| MS.gene050330 | MS.gene92763 | -0.811118 | 8.21E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene92763 | 0.828317 | 9.62E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene92763 | -0.825277 | 5.12E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene92763 | 0.8325 | 9.12E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene92763 | 0.809182 | 2.15E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene92763 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene92763 | 0.854952 | 8.74E-62 | -1.69E-46 |
| MS.gene050820 | MS.gene92763 | 0.843661 | 1.22E-58 | -1.69E-46 |
| MS.gene050953 | MS.gene92763 | 0.804919 | 1.71E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene92763 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene92763 | 0.839891 | 1.21E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene92763 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene92763 | 0.86561 | 5.21E-65 | -1.69E-46 |
| MS.gene052333 | MS.gene92763 | 0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene92763 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene92763 | 0.857621 | 1.44E-62 | -1.69E-46 |
| MS.gene053811 | MS.gene92763 | 0.809286 | 2.04E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene92763 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene054072 | MS.gene92763 | 0.816421 | 5.58E-52 | -1.69E-46 |
| MS.gene054083 | MS.gene92763 | 0.828608 | 8.18E-55 | -1.69E-46 |
| MS.gene054093 | MS.gene92763 | 0.813281 | 2.77E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene92763 | 0.800199 | 1.61E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene92763 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene05432 | MS.gene92763 | 0.811693 | 6.16E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene92763 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene92763 | 0.840702 | 7.42E-58 | -1.69E-46 |
| MS.gene054826 | MS.gene92763 | 0.816133 | 6.47E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene92763 | 0.837458 | 5.14E-57 | -1.69E-46 |
| MS.gene054942 | MS.gene92763 | 0.816265 | 6.04E-52 | -1.69E-46 |
| MS.gene055225 | MS.gene92763 | 0.833308 | 5.75E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene92763 | 0.8155 | 8.95E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene92763 | 0.805054 | 1.61E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene92763 | 0.843875 | 1.07E-58 | -1.69E-46 |
| MS.gene056506 | MS.gene92763 | 0.803827 | 2.89E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene92763 | 0.8307 | 2.53E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene92763 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene057255 | MS.gene92763 | 0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene057967 | MS.gene92763 | 0.808608 | 2.85E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene92763 | 0.82413 | 9.54E-54 | -1.69E-46 |
| MS.gene058220 | MS.gene92763 | 0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene058378 | MS.gene92763 | 0.868264 | 7.43E-66 | -1.69E-46 |
| MS.gene058426 | MS.gene92763 | 0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene92763 | 0.810621 | 1.05E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene92763 | 0.809206 | 2.12E-50 | -1.69E-46 |
| MS.gene059124 | MS.gene92763 | 0.804313 | 2.29E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene92763 | 0.804111 | 2.53E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene92763 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene92763 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene060255 | MS.gene92763 | 0.824706 | 6.98E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene92763 | 0.823158 | 1.61E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene92763 | -0.81462 | 1.40E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene92763 | 0.808619 | 2.83E-50 | -1.69E-46 |
| MS.gene061085 | MS.gene92763 | 0.800509 | 1.39E-48 | -1.69E-46 |
| MS.gene061114 | MS.gene92763 | -0.821298 | 4.35E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92763 | MS.gene07480 | PPI |
| MS.gene92763 | MS.gene062191 | PPI |
| MS.gene059347 | MS.gene92763 | PPI |
| MS.gene92763 | MS.gene05535 | PPI |
| MS.gene92763 | MS.gene05536 | PPI |
| MS.gene92763 | MS.gene61402 | PPI |
| MS.gene062192 | MS.gene92763 | PPI |
| MS.gene92763 | MS.gene06516 | PPI |
| MS.gene92763 | MS.gene004947 | PPI |
| MS.gene92763 | MS.gene052452 | PPI |
| MS.gene92763 | MS.gene86814 | PPI |
| MS.gene92763 | MS.gene61401 | PPI |
| MS.gene92763 | MS.gene013419 | PPI |
| MS.gene92763 | MS.gene042963 | PPI |
| MS.gene07479 | MS.gene92763 | PPI |
| MS.gene92763 | MS.gene069814 | PPI |
| MS.gene92763 | MS.gene83318 | PPI |
| MS.gene92763 | MS.gene052453 | PPI |
| MS.gene004948 | MS.gene92763 | PPI |
| MS.gene92763 | MS.gene049391 | PPI |
| MS.gene92763 | MS.gene042962 | PPI |
| MS.gene92763 | MS.gene005005 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92763.t1 | MTR_7g073640 | 94.514 | 401 | 19 | 2 | 1 | 399 | 10 | 409 | 0.0 | 779 |
| MS.gene92763.t1 | MTR_7g073650 | 91.451 | 386 | 33 | 0 | 14 | 399 | 23 | 408 | 0.0 | 737 |
| MS.gene92763.t1 | MTR_6g069140 | 65.499 | 371 | 126 | 2 | 27 | 397 | 51 | 419 | 0.0 | 521 |
| MS.gene92763.t1 | MTR_6g086625 | 61.809 | 398 | 145 | 4 | 4 | 397 | 11 | 405 | 0.0 | 518 |
| MS.gene92763.t1 | MTR_1g077480 | 64.420 | 371 | 130 | 2 | 27 | 397 | 43 | 411 | 0.0 | 516 |
| MS.gene92763.t1 | MTR_6g086575 | 62.060 | 398 | 143 | 5 | 4 | 397 | 11 | 404 | 0.0 | 516 |
| MS.gene92763.t1 | MTR_1g077520 | 60.294 | 408 | 150 | 5 | 1 | 399 | 5 | 409 | 0.0 | 509 |
| MS.gene92763.t1 | MTR_3g094160 | 58.794 | 398 | 159 | 3 | 3 | 397 | 30 | 425 | 3.16e-166 | 473 |
| MS.gene92763.t1 | MTR_1g077520 | 62.727 | 330 | 115 | 2 | 1 | 322 | 5 | 334 | 1.23e-151 | 432 |
| MS.gene92763.t1 | MTR_0279s0030 | 95.200 | 125 | 6 | 0 | 275 | 399 | 101 | 225 | 1.17e-78 | 242 |
| MS.gene92763.t1 | MTR_0279s0030 | 95.200 | 125 | 6 | 0 | 275 | 399 | 185 | 309 | 3.11e-77 | 241 |
| MS.gene92763.t1 | MTR_0279s0030 | 95.200 | 125 | 6 | 0 | 275 | 399 | 250 | 374 | 7.20e-77 | 243 |
| MS.gene92763.t1 | MTR_1g078410 | 64.800 | 125 | 44 | 0 | 96 | 220 | 60 | 184 | 8.24e-53 | 174 |
| MS.gene92763.t1 | MTR_2g096530 | 25.641 | 390 | 192 | 14 | 3 | 303 | 5 | 385 | 6.28e-22 | 98.2 |
| MS.gene92763.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 1.34e-21 | 96.7 |
| MS.gene92763.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 3.82e-21 | 95.9 |
| MS.gene92763.t1 | MTR_8g089740 | 26.531 | 392 | 189 | 14 | 1 | 306 | 3 | 381 | 6.64e-21 | 95.1 |
| MS.gene92763.t1 | MTR_8g089725 | 25.586 | 469 | 230 | 19 | 42 | 395 | 38 | 502 | 2.81e-20 | 92.8 |
| MS.gene92763.t1 | MTR_3g086580 | 25.843 | 356 | 172 | 11 | 38 | 303 | 36 | 389 | 7.89e-20 | 92.0 |
| MS.gene92763.t1 | MTR_8g089735 | 25.373 | 469 | 231 | 19 | 42 | 395 | 38 | 502 | 1.45e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92763.t1 | AT5G08380 | 74.687 | 399 | 100 | 1 | 1 | 399 | 13 | 410 | 0.0 | 630 |
| MS.gene92763.t1 | AT5G08370 | 66.027 | 365 | 122 | 2 | 31 | 395 | 29 | 391 | 0.0 | 514 |
| MS.gene92763.t1 | AT5G08370 | 65.668 | 367 | 124 | 2 | 29 | 395 | 1 | 365 | 0.0 | 513 |
| MS.gene92763.t1 | AT5G08380 | 76.645 | 304 | 71 | 0 | 1 | 304 | 13 | 316 | 2.75e-178 | 499 |
| MS.gene92763.t1 | AT3G56310 | 59.326 | 386 | 152 | 3 | 15 | 397 | 46 | 429 | 9.52e-164 | 467 |
| MS.gene92763.t1 | AT3G56310 | 55.699 | 386 | 142 | 4 | 15 | 397 | 46 | 405 | 4.75e-147 | 423 |
| MS.gene92763.t1 | AT3G26380 | 24.217 | 351 | 178 | 10 | 42 | 306 | 42 | 390 | 4.03e-18 | 86.3 |
| MS.gene92763.t1 | AT3G26380 | 24.217 | 351 | 178 | 10 | 42 | 306 | 42 | 390 | 7.36e-18 | 85.9 |
Find 99 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGGCTCCTCTTCTTCT+AGG | 0.179259 | 7.4:-31068290 | MS.gene92763:intron |
| ATATGGGCAGGTCCTCTTTC+AGG | 0.182460 | 7.4:-31067800 | MS.gene92763:CDS |
| GAGAAGTGTATCCAGCTTTA+TGG | 0.220990 | 7.4:-31068927 | MS.gene92763:CDS |
| TGGTGACCCTCTTGCATATT+TGG | 0.229764 | 7.4:-31070814 | MS.gene92763:CDS |
| TGTGTCACTGCTTCATCATT+AGG | 0.260692 | 7.4:-31070785 | MS.gene92763:CDS |
| CGAACTTAATCGCGATAATA+AGG | 0.278598 | 7.4:-31069781 | MS.gene92763:intron |
| ATATTGATATAACAGCTAAT+TGG | 0.300144 | 7.4:-31067733 | MS.gene92763:CDS |
| GCTTCTGAAGGCCTCTATTA+AGG | 0.306135 | 7.4:+31067756 | None:intergenic |
| TACCCATGATGCAAAAGTTT+TGG | 0.317269 | 7.4:+31069408 | None:intergenic |
| GTGTCACTGCTTCATCATTA+GGG | 0.339417 | 7.4:-31070784 | MS.gene92763:CDS |
| TTTCCAACCTCAAGCATATC+AGG | 0.349661 | 7.4:+31068538 | None:intergenic |
| CTTATTATCGCGATTAAGTT+CGG | 0.355063 | 7.4:+31069782 | None:intergenic |
| CATGGAGATAGTCTCTAATA+AGG | 0.359543 | 7.4:-31068237 | MS.gene92763:CDS |
| TGTTTGTGAGATGGTGGTTT+TGG | 0.366101 | 7.4:-31070834 | None:intergenic |
| AAGAAATCAACATTTCCTTC+TGG | 0.375662 | 7.4:-31069634 | MS.gene92763:CDS |
| TTGTCCAAGCAAGAGACCTT+TGG | 0.388653 | 7.4:-31067682 | MS.gene92763:CDS |
| CTGATGACATAAATGATTCA+TGG | 0.392813 | 7.4:-31068873 | MS.gene92763:CDS |
| TATTGTTCACTTCAGTTTGT+GGG | 0.408582 | 7.4:-31068491 | MS.gene92763:CDS |
| GCGTACAAGCTAAGAAAGTT+AGG | 0.409733 | 7.4:-31068100 | MS.gene92763:CDS |
| AGAAGTGTATCCAGCTTTAT+GGG | 0.412861 | 7.4:-31068926 | MS.gene92763:CDS |
| GCTGATGCCCTTGTTTCAAC+TGG | 0.414005 | 7.4:-31069963 | MS.gene92763:CDS |
| TATTGATATAACAGCTAATT+GGG | 0.420644 | 7.4:-31067732 | MS.gene92763:CDS |
| TGTCCAAGCAAGAGACCTTT+GGG | 0.423545 | 7.4:-31067681 | MS.gene92763:CDS |
| CCTTGGTAAAACTCCTCCTA+TGG | 0.424348 | 7.4:-31070714 | MS.gene92763:CDS |
| CCGAGCAAATACCAGTTTGC+CGG | 0.426356 | 7.4:+31070172 | None:intergenic |
| TTGTTGCTGCAGATGATTGT+TGG | 0.434548 | 7.4:-31069806 | MS.gene92763:intron |
| AGAAGAAACCTTCTTGCTAA+TGG | 0.435698 | 7.4:-31070737 | MS.gene92763:CDS |
| GCTAATGCCCGAGTCATAAC+AGG | 0.436420 | 7.4:+31069073 | None:intergenic |
| AACCTTCTTGCTAATGGCCT+TGG | 0.440891 | 7.4:-31070731 | MS.gene92763:CDS |
| CAGGTCCTCTTTCAGGAGAT+AGG | 0.444331 | 7.4:-31067793 | MS.gene92763:CDS |
| GACCCTCTTGCATATTTGGT+TGG | 0.448523 | 7.4:-31070810 | MS.gene92763:CDS |
| ATATTGTTCACTTCAGTTTG+TGG | 0.449015 | 7.4:-31068492 | MS.gene92763:CDS |
| CTTGGAATTTATTCAGATGC+AGG | 0.449478 | 7.4:-31069568 | MS.gene92763:CDS |
| AGCTTTATGGGGTGCTAAAG+TGG | 0.461428 | 7.4:-31068914 | MS.gene92763:CDS |
| CCTCCCAAAGGTCTCTTGCT+TGG | 0.464465 | 7.4:+31067678 | None:intergenic |
| AGCATGCAAGACCTGGTGGC+TGG | 0.466104 | 7.4:-31068676 | MS.gene92763:CDS |
| GTGCTAAAGTGGGAAATAGT+TGG | 0.469009 | 7.4:-31068903 | MS.gene92763:CDS |
| GAAGTTATTGCAGTTAATCA+AGG | 0.470357 | 7.4:-31068215 | MS.gene92763:intron |
| TACCAAGGCCATTAGCAAGA+AGG | 0.473441 | 7.4:+31070729 | None:intergenic |
| TGTTGCTGCAGATGATTGTT+GGG | 0.474807 | 7.4:-31069805 | MS.gene92763:intron |
| TTATGTACCTATGTTGACAT+AGG | 0.479023 | 7.4:+31069920 | None:intergenic |
| AATAAAATGCCTGGTTCCCT+AGG | 0.483116 | 7.4:-31069448 | MS.gene92763:CDS |
| GCTGTTGTGTTCCTTAATAG+AGG | 0.483389 | 7.4:-31067767 | MS.gene92763:CDS |
| CATAGCAAGGGTCTTAAGCT+TGG | 0.485258 | 7.4:-31069586 | MS.gene92763:CDS |
| TCACATAGCGAAAAGAAGAT+TGG | 0.486370 | 7.4:+31069037 | None:intergenic |
| CAGTTTGTGGGCTATTTCAA+AGG | 0.488558 | 7.4:-31068479 | MS.gene92763:intron |
| ATGCTTGAGGTTGGAAATGG+AGG | 0.493055 | 7.4:-31068532 | MS.gene92763:CDS |
| GATATGCTTGAGGTTGGAAA+TGG | 0.493237 | 7.4:-31068535 | MS.gene92763:CDS |
| TATGATAACTGTAACAATGA+TGG | 0.496661 | 7.4:-31069279 | MS.gene92763:CDS |
| TGCAGATTATGTTCATAGCA+AGG | 0.510065 | 7.4:-31069599 | MS.gene92763:CDS |
| TCAACTGGTCTATATAAGCT+TGG | 0.514706 | 7.4:-31069948 | MS.gene92763:CDS |
| GCAAGACCTGGTGGCTGGAA+TGG | 0.519508 | 7.4:-31068671 | MS.gene92763:intron |
| TGATGACATAAATGATTCAT+GGG | 0.521279 | 7.4:-31068872 | MS.gene92763:CDS |
| CTTGGTAAAACTCCTCCTAT+GGG | 0.521865 | 7.4:-31070713 | MS.gene92763:CDS |
| ACATGTAGCAATAAAATGCC+TGG | 0.522248 | 7.4:-31069457 | MS.gene92763:CDS |
| AACTCATGACCTAGGGAACC+AGG | 0.526273 | 7.4:+31069439 | None:intergenic |
| AGGTCCTCTTTCAGGAGATA+GGG | 0.534637 | 7.4:-31067792 | MS.gene92763:CDS |
| GATCCTGATATGCTTGAGGT+TGG | 0.538064 | 7.4:-31068541 | MS.gene92763:CDS |
| TCATTAGGGAACAACTATGA+TGG | 0.538551 | 7.4:-31070770 | MS.gene92763:CDS |
| GCTAAGAAAGTTAGGATGGA+AGG | 0.541248 | 7.4:-31068092 | MS.gene92763:CDS |
| ACTTTAGCACCCCATAAAGC+TGG | 0.545198 | 7.4:+31068916 | None:intergenic |
| GCAGATTATGTTCATAGCAA+GGG | 0.548297 | 7.4:-31069598 | MS.gene92763:CDS |
| TTGGAATTTATTCAGATGCA+GGG | 0.559186 | 7.4:-31069567 | MS.gene92763:intron |
| CTTATTAGAGACTATCTCCA+TGG | 0.563876 | 7.4:+31068238 | None:intergenic |
| GCTACCCTATCTCCTGAAAG+AGG | 0.565978 | 7.4:+31067788 | None:intergenic |
| ACAAGCTAAGAAAGTTAGGA+TGG | 0.568444 | 7.4:-31068096 | MS.gene92763:CDS |
| TAGGTATCCTGTTATGACTC+GGG | 0.568609 | 7.4:-31069080 | MS.gene92763:CDS |
| CATCTTGAAACTCATGACCT+AGG | 0.568843 | 7.4:+31069431 | None:intergenic |
| TTATATCAATATGCTTCTGA+AGG | 0.572424 | 7.4:+31067744 | None:intergenic |
| ACATAAATGATTCATGGGAA+AGG | 0.572873 | 7.4:-31068867 | MS.gene92763:intron |
| ATCTTGAAACTCATGACCTA+GGG | 0.575933 | 7.4:+31069432 | None:intergenic |
| ATAGGTATCCTGTTATGACT+CGG | 0.580091 | 7.4:-31069081 | MS.gene92763:intron |
| TATCATACAGGTGGAACAGT+TGG | 0.580370 | 7.4:-31070230 | MS.gene92763:intron |
| GCTTTATGGGGTGCTAAAGT+GGG | 0.582782 | 7.4:-31068913 | MS.gene92763:CDS |
| ACATCGCAACCTAGAAGAAG+AGG | 0.583965 | 7.4:+31068281 | None:intergenic |
| GGATACACCTATGTCAACAT+AGG | 0.584008 | 7.4:-31069927 | MS.gene92763:intron |
| ACTCGGGCATTAGCGAAAGC+AGG | 0.584046 | 7.4:-31069064 | MS.gene92763:CDS |
| TATATAGACCAGTTGAAACA+AGG | 0.586502 | 7.4:+31069955 | None:intergenic |
| TTTATGCAGTATGATTTCAA+GGG | 0.594421 | 7.4:-31068723 | MS.gene92763:intron |
| AAATGTGACAAAAGAGACCA+TGG | 0.599971 | 7.4:-31068255 | MS.gene92763:CDS |
| TACAATGAATTACCTCCCAA+AGG | 0.608422 | 7.4:+31067666 | None:intergenic |
| AACAGATCCTGATATGCTTG+AGG | 0.609688 | 7.4:-31068545 | MS.gene92763:intron |
| CTTACCACGATAGATTCGCT+TGG | 0.612262 | 7.4:-31068122 | MS.gene92763:intron |
| ACAGCTAATTGGGATGACAT+TGG | 0.612622 | 7.4:-31067722 | MS.gene92763:CDS |
| TAGGATGGAAGGTGATGCTG+AGG | 0.614856 | 7.4:-31068081 | MS.gene92763:intron |
| GCAAGAGCTTTAATGCCAGA+AGG | 0.618630 | 7.4:+31069619 | None:intergenic |
| AAACCAACCAAATATGCAAG+AGG | 0.622631 | 7.4:+31070807 | None:intergenic |
| TGCTTGAGGTTGGAAATGGA+GGG | 0.639239 | 7.4:-31068531 | MS.gene92763:CDS |
| ATATAGACCAGTTGAAACAA+GGG | 0.648146 | 7.4:+31069956 | None:intergenic |
| TATGCTGAGCATGCAAGACC+TGG | 0.649983 | 7.4:-31068683 | MS.gene92763:CDS |
| GCTGAGCATGCAAGACCTGG+TGG | 0.651335 | 7.4:-31068680 | MS.gene92763:CDS |
| AATTTAGTGATATACCCCAT+AGG | 0.655568 | 7.4:+31070698 | None:intergenic |
| TTAGTGATATACCCCATAGG+AGG | 0.659380 | 7.4:+31070701 | None:intergenic |
| GAAGTGTATCCAGCTTTATG+GGG | 0.664588 | 7.4:-31068925 | MS.gene92763:CDS |
| AACCAACCAAATATGCAAGA+GGG | 0.677174 | 7.4:+31070808 | None:intergenic |
| TTGGTAAAACTCCTCCTATG+GGG | 0.687837 | 7.4:-31070712 | MS.gene92763:intron |
| AATGTATGTGCTGAAACCAG+TGG | 0.725973 | 7.4:-31067460 | MS.gene92763:CDS |
| CCAAGCAAGAGACCTTTGGG+AGG | 0.733936 | 7.4:-31067678 | MS.gene92763:intron |
| ATGGAACAAATGTCACTGTG+AGG | 0.775681 | 7.4:-31069260 | MS.gene92763:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAATACAAG+GGG | + | chr7.4:31068756-31068775 | None:intergenic | 10.0% |
| !! | GAATAAAAAATAAAATACAA+GGG | + | chr7.4:31068757-31068776 | None:intergenic | 10.0% |
| !! | TGAATAAAAAATAAAATACA+AGG | + | chr7.4:31068758-31068777 | None:intergenic | 10.0% |
| !! | AAAACATATATAACAGTATT+TGG | + | chr7.4:31068608-31068627 | None:intergenic | 15.0% |
| !! | ATAAAAAATAAAATACAAGG+GGG | + | chr7.4:31068755-31068774 | None:intergenic | 15.0% |
| !! | TAGAAATACAAAACATAAAT+TGG | + | chr7.4:31070652-31070671 | None:intergenic | 15.0% |
| !!! | AATACTGTTATATATGTTTT+AGG | - | chr7.4:31068608-31068627 | MS.gene92763:intron | 15.0% |
| !!! | ATACTGTTATATATGTTTTA+GGG | - | chr7.4:31068609-31068628 | MS.gene92763:intron | 15.0% |
| !! | AAATTGATGAAAAAATCATC+CGG | - | chr7.4:31068088-31068107 | MS.gene92763:CDS | 20.0% |
| !! | ACAAACAAATAAAGTTTCAT+TGG | + | chr7.4:31069327-31069346 | None:intergenic | 20.0% |
| !! | AGTAACATATTACAATGATT+AGG | + | chr7.4:31070120-31070139 | None:intergenic | 20.0% |
| !! | ATATTGATATAACAGCTAAT+TGG | - | chr7.4:31070546-31070565 | MS.gene92763:intron | 20.0% |
| !! | CAACAAAAAATTATGGATAA+AGG | + | chr7.4:31068459-31068478 | None:intergenic | 20.0% |
| !! | TAATCAAGTAAAATAACCAT+TGG | + | chr7.4:31068959-31068978 | None:intergenic | 20.0% |
| !! | TATTGATATAACAGCTAATT+GGG | - | chr7.4:31070547-31070566 | MS.gene92763:intron | 20.0% |
| !! | TATTGTGAAGTCAAAATATA+AGG | - | chr7.4:31070345-31070364 | MS.gene92763:intron | 20.0% |
| !! | TCTAAAGATTTATGATACTA+AGG | - | chr7.4:31068005-31068024 | MS.gene92763:intron | 20.0% |
| !! | TGATAAGATAAATGTCTATT+AGG | + | chr7.4:31069096-31069115 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTGGTTAGATAT+GGG | - | chr7.4:31070463-31070482 | MS.gene92763:intron | 20.0% |
| !!! | GGTTATTTTACTTGATTATA+GGG | - | chr7.4:31068961-31068980 | MS.gene92763:intron | 20.0% |
| !!! | TGAAACTTTATTTGTTTGTT+AGG | - | chr7.4:31069328-31069347 | MS.gene92763:intron | 20.0% |
| !!! | TGGTTATTTTACTTGATTAT+AGG | - | chr7.4:31068960-31068979 | MS.gene92763:intron | 20.0% |
| ! | ACCATGACATTCTTATATAT+AGG | - | chr7.4:31069180-31069199 | MS.gene92763:intron | 25.0% |
| ! | ACCTATATATAAGAATGTCA+TGG | + | chr7.4:31069184-31069203 | None:intergenic | 25.0% |
| ! | AGATGCATGTAAAATATCAA+TGG | + | chr7.4:31067988-31068007 | None:intergenic | 25.0% |
| ! | ATCAGCTATAATTAGTTGAT+AGG | + | chr7.4:31067945-31067964 | None:intergenic | 25.0% |
| ! | CATGATTTCACATAAATCAA+AGG | + | chr7.4:31069930-31069949 | None:intergenic | 25.0% |
| ! | CGAACTAATCTCTTATATAT+AGG | + | chr7.4:31067874-31067893 | None:intergenic | 25.0% |
| ! | GCCAAATTATTAAAACTGTA+AGG | + | chr7.4:31070409-31070428 | None:intergenic | 25.0% |
| ! | GTGTAGAAACTAATTCAAAT+AGG | - | chr7.4:31069904-31069923 | MS.gene92763:intron | 25.0% |
| ! | TAGCAATACTTTAATTAGCA+AGG | - | chr7.4:31067646-31067665 | MS.gene92763:intron | 25.0% |
| ! | TAGTATTATTTGTACGGAAT+TGG | - | chr7.4:31070257-31070276 | MS.gene92763:intron | 25.0% |
| ! | TATGATAACTGTAACAATGA+TGG | - | chr7.4:31069000-31069019 | MS.gene92763:intron | 25.0% |
| ! | TGATGACATAAATGATTCAT+GGG | - | chr7.4:31069407-31069426 | MS.gene92763:intron | 25.0% |
| ! | TTATATCAATATGCTTCTGA+AGG | + | chr7.4:31070538-31070557 | None:intergenic | 25.0% |
| ! | TTTATGCAGTATGATTTCAA+GGG | - | chr7.4:31069556-31069575 | MS.gene92763:intron | 25.0% |
| ! | TTTGGCTAAACAACTTAATT+AGG | - | chr7.4:31069861-31069880 | MS.gene92763:intron | 25.0% |
| !! | AATTAAGTTGTTTAGCCAAA+CGG | + | chr7.4:31069861-31069880 | None:intergenic | 25.0% |
| !! | TATGTTTTACAGCATTTTGT+TGG | - | chr7.4:31070679-31070698 | MS.gene92763:intron | 25.0% |
| !! | TCATACGTAATTTTGAACTT+TGG | - | chr7.4:31069113-31069132 | MS.gene92763:intron | 25.0% |
| !! | TTTTATGCAGTATGATTTCA+AGG | - | chr7.4:31069555-31069574 | MS.gene92763:intron | 25.0% |
| !!! | AATTCCTTCTCTTAATTTGT+TGG | - | chr7.4:31067600-31067619 | MS.gene92763:intron | 25.0% |
| !!! | ATATATGTTTTAGGGTAATC+TGG | - | chr7.4:31068617-31068636 | MS.gene92763:intron | 25.0% |
| !!! | CATGTTTTTTTGGTTAGATA+TGG | - | chr7.4:31070462-31070481 | MS.gene92763:intron | 25.0% |
| !!! | CATTTTTTTTGCTATCATAC+AGG | - | chr7.4:31068037-31068056 | MS.gene92763:intron | 25.0% |
| !!! | GCCTTACAGTTTTAATAATT+TGG | - | chr7.4:31070405-31070424 | MS.gene92763:intron | 25.0% |
| !!! | TACTTATCTGCATGTTTTTT+TGG | - | chr7.4:31070452-31070471 | MS.gene92763:intron | 25.0% |
| !!! | TGATTTGAGTTGAAGATTAA+AGG | + | chr7.4:31069149-31069168 | None:intergenic | 25.0% |
| !!! | TTAATTTGTTGGATTCACTT+CGG | - | chr7.4:31067611-31067630 | MS.gene92763:intron | 25.0% |
| !!! | TTCAGTGTTTTTACTTTGTA+AGG | - | chr7.4:31068410-31068429 | MS.gene92763:intron | 25.0% |
| AAGAAATCAACATTTCCTTC+TGG | - | chr7.4:31068645-31068664 | MS.gene92763:intron | 30.0% | |
| AATTTAGTGATATACCCCAT+AGG | + | chr7.4:31067584-31067603 | None:intergenic | 30.0% | |
| ACATAAATGATTCATGGGAA+AGG | - | chr7.4:31069412-31069431 | MS.gene92763:CDS | 30.0% | |
| ATATAGACCAGTTGAAACAA+GGG | + | chr7.4:31068326-31068345 | None:intergenic | 30.0% | |
| ATATTGTTCACTTCAGTTTG+TGG | - | chr7.4:31069787-31069806 | MS.gene92763:CDS | 30.0% | |
| CAAATAAAGTTTCATTGGAG+AGG | + | chr7.4:31069322-31069341 | None:intergenic | 30.0% | |
| CGTCTCTAGTATTATTTGTA+CGG | - | chr7.4:31070251-31070270 | MS.gene92763:intron | 30.0% | |
| CTGATGACATAAATGATTCA+TGG | - | chr7.4:31069406-31069425 | MS.gene92763:intron | 30.0% | |
| CTTATTATCGCGATTAAGTT+CGG | + | chr7.4:31068500-31068519 | None:intergenic | 30.0% | |
| GAAGTTATTGCAGTTAATCA+AGG | - | chr7.4:31070064-31070083 | MS.gene92763:intron | 30.0% | |
| GAATCCAACAAATTAAGAGA+AGG | + | chr7.4:31067607-31067626 | None:intergenic | 30.0% | |
| GGATACTAAGGTTACAAATA+AGG | - | chr7.4:31070700-31070719 | MS.gene92763:intron | 30.0% | |
| TATATAGACCAGTTGAAACA+AGG | + | chr7.4:31068327-31068346 | None:intergenic | 30.0% | |
| TATTGTTCACTTCAGTTTGT+GGG | - | chr7.4:31069788-31069807 | MS.gene92763:CDS | 30.0% | |
| TCTGCAGCAACAAAAAATTA+TGG | + | chr7.4:31068466-31068485 | None:intergenic | 30.0% | |
| TTATGTACCTATGTTGACAT+AGG | + | chr7.4:31068362-31068381 | None:intergenic | 30.0% | |
| TTGGAATTTATTCAGATGCA+GGG | - | chr7.4:31068712-31068731 | MS.gene92763:CDS | 30.0% | |
| TTTATAGACATCTGAGAAAC+TGG | - | chr7.4:31068220-31068239 | MS.gene92763:CDS | 30.0% | |
| ! | ATTAAGTTGTTTAGCCAAAC+GGG | + | chr7.4:31069860-31069879 | None:intergenic | 30.0% |
| ! | TAAAACTGTAAGGCATTCAA+GGG | + | chr7.4:31070399-31070418 | None:intergenic | 30.0% |
| ! | TTAAAACTGTAAGGCATTCA+AGG | + | chr7.4:31070400-31070419 | None:intergenic | 30.0% |
| !! | GTTTTATTAGCTAGTAGCTA+AGG | + | chr7.4:31069529-31069548 | None:intergenic | 30.0% |
| !!! | CTTCTTTTTTTCACCTATGA+AGG | - | chr7.4:31069962-31069981 | MS.gene92763:CDS | 30.0% |
| !!! | TTTTTTTGCTATCATACAGG+TGG | - | chr7.4:31068040-31068059 | MS.gene92763:intron | 30.0% |
| AAACCAACCAAATATGCAAG+AGG | + | chr7.4:31067475-31067494 | None:intergenic | 35.0% | |
| AAACCATGCACTCAATTTGT+TGG | - | chr7.4:31069438-31069457 | MS.gene92763:CDS | 35.0% | |
| AAATGTGACAAAAGAGACCA+TGG | - | chr7.4:31070024-31070043 | MS.gene92763:intron | 35.0% | |
| AACCAACCAAATATGCAAGA+GGG | + | chr7.4:31067474-31067493 | None:intergenic | 35.0% | |
| ACAAGCTAAGAAAGTTAGGA+TGG | - | chr7.4:31070183-31070202 | MS.gene92763:intron | 35.0% | |
| ACATGTAAGATACCTGTGAA+AGG | + | chr7.4:31068808-31068827 | None:intergenic | 35.0% | |
| ACATGTAGCAATAAAATGCC+TGG | - | chr7.4:31068822-31068841 | MS.gene92763:intron | 35.0% | |
| AGAAGAAACCTTCTTGCTAA+TGG | - | chr7.4:31067542-31067561 | MS.gene92763:intron | 35.0% | |
| ATAGGTATCCTGTTATGACT+CGG | - | chr7.4:31069198-31069217 | MS.gene92763:intron | 35.0% | |
| ATAGGTGAAAAAAAGAAGCC+AGG | + | chr7.4:31069960-31069979 | None:intergenic | 35.0% | |
| ATCAAGTGCTATGTAACCAA+TGG | - | chr7.4:31068940-31068959 | MS.gene92763:intron | 35.0% | |
| ATCTTGAAACTCATGACCTA+GGG | + | chr7.4:31068850-31068869 | None:intergenic | 35.0% | |
| CATGGAGATAGTCTCTAATA+AGG | - | chr7.4:31070042-31070061 | MS.gene92763:intron | 35.0% | |
| CGAACTTAATCGCGATAATA+AGG | - | chr7.4:31068498-31068517 | MS.gene92763:CDS | 35.0% | |
| CTTATTAGAGACTATCTCCA+TGG | + | chr7.4:31070044-31070063 | None:intergenic | 35.0% | |
| CTTGGAATTTATTCAGATGC+AGG | - | chr7.4:31068711-31068730 | MS.gene92763:CDS | 35.0% | |
| GCAGATTATGTTCATAGCAA+GGG | - | chr7.4:31068681-31068700 | MS.gene92763:CDS | 35.0% | |
| GTGAAATCATGTATTGTACC+TGG | - | chr7.4:31069939-31069958 | MS.gene92763:CDS | 35.0% | |
| TACAATGAATTACCTCCCAA+AGG | + | chr7.4:31070616-31070635 | None:intergenic | 35.0% | |
| TCACATAGCGAAAAGAAGAT+TGG | + | chr7.4:31069245-31069264 | None:intergenic | 35.0% | |
| TCATTAGGGAACAACTATGA+TGG | - | chr7.4:31067509-31067528 | MS.gene92763:CDS | 35.0% | |
| TGCAGATTATGTTCATAGCA+AGG | - | chr7.4:31068680-31068699 | MS.gene92763:CDS | 35.0% | |
| ! | AGAAGTGTATCCAGCTTTAT+GGG | - | chr7.4:31069353-31069372 | MS.gene92763:intron | 35.0% |
| ! | ATGCCAAAACTTTTGCATCA+TGG | - | chr7.4:31068868-31068887 | MS.gene92763:CDS | 35.0% |
| ! | CAGCATTTTGTTGGATACTA+AGG | - | chr7.4:31070688-31070707 | MS.gene92763:intron | 35.0% |
| ! | TACCCATGATGCAAAAGTTT+TGG | + | chr7.4:31068874-31068893 | None:intergenic | 35.0% |
| ! | TCAACTGGTCTATATAAGCT+TGG | - | chr7.4:31068331-31068350 | MS.gene92763:intron | 35.0% |
| ! | TCTTCTTTTCGCTATGTGAA+TGG | - | chr7.4:31069246-31069265 | MS.gene92763:intron | 35.0% |
| ! | TGCCAAAACTTTTGCATCAT+GGG | - | chr7.4:31068869-31068888 | MS.gene92763:CDS | 35.0% |
| ! | TTAAGTTGTTTAGCCAAACG+GGG | + | chr7.4:31069859-31069878 | None:intergenic | 35.0% |
| !!! | ATGTTTTAGGGTAATCTGGT+GGG | - | chr7.4:31068621-31068640 | MS.gene92763:intron | 35.0% |
| !!! | TATGTTTTAGGGTAATCTGG+TGG | - | chr7.4:31068620-31068639 | MS.gene92763:intron | 35.0% |
| !!! | TTTTTTGGTTAGATATGGGC+AGG | - | chr7.4:31070467-31070486 | MS.gene92763:intron | 35.0% |
| AACAGATCCTGATATGCTTG+AGG | - | chr7.4:31069734-31069753 | MS.gene92763:intron | 40.0% | |
| AATAAAATGCCTGGTTCCCT+AGG | - | chr7.4:31068831-31068850 | MS.gene92763:intron | 40.0% | |
| AATGTATGTGCTGAAACCAG+TGG | - | chr7.4:31070819-31070838 | MS.gene92763:CDS | 40.0% | |
| ACAGCTAATTGGGATGACAT+TGG | - | chr7.4:31070557-31070576 | MS.gene92763:intron | 40.0% | |
| AGCCTGCAATAAACCTTCAT+AGG | + | chr7.4:31069978-31069997 | None:intergenic | 40.0% | |
| AGCTAGTAGCTAAGGATAGT+AGG | + | chr7.4:31069521-31069540 | None:intergenic | 40.0% | |
| ATGGAACAAATGTCACTGTG+AGG | - | chr7.4:31069019-31069038 | MS.gene92763:intron | 40.0% | |
| CACCTATGAAGGTTTATTGC+AGG | - | chr7.4:31069973-31069992 | MS.gene92763:intron | 40.0% | |
| CATCTTGAAACTCATGACCT+AGG | + | chr7.4:31068851-31068870 | None:intergenic | 40.0% | |
| CTTGGTAAAACTCCTCCTAT+GGG | - | chr7.4:31067566-31067585 | MS.gene92763:intron | 40.0% | |
| GAAAAAATCATCCGGCAAAC+TGG | - | chr7.4:31068096-31068115 | MS.gene92763:CDS | 40.0% | |
| GAATTGGATTCTCTGCTGTT+CGG | - | chr7.4:31070273-31070292 | MS.gene92763:intron | 40.0% | |
| GATATGCTTGAGGTTGGAAA+TGG | - | chr7.4:31069744-31069763 | MS.gene92763:intron | 40.0% | |
| GCGTACAAGCTAAGAAAGTT+AGG | - | chr7.4:31070179-31070198 | MS.gene92763:intron | 40.0% | |
| GCTAAGAAAGTTAGGATGGA+AGG | - | chr7.4:31070187-31070206 | MS.gene92763:CDS | 40.0% | |
| GCTGTTGTGTTCCTTAATAG+AGG | - | chr7.4:31070512-31070531 | MS.gene92763:intron | 40.0% | |
| GGATACACCTATGTCAACAT+AGG | - | chr7.4:31068352-31068371 | MS.gene92763:intron | 40.0% | |
| GGCGTACAATCTTAATCCAA+CGG | - | chr7.4:31070366-31070385 | MS.gene92763:intron | 40.0% | |
| GTACCAACAAATTGAGTGCA+TGG | + | chr7.4:31069444-31069463 | None:intergenic | 40.0% | |
| GTGCTAAAGTGGGAAATAGT+TGG | - | chr7.4:31069376-31069395 | MS.gene92763:intron | 40.0% | |
| TAGGTATCCTGTTATGACTC+GGG | - | chr7.4:31069199-31069218 | MS.gene92763:intron | 40.0% | |
| TATCATACAGGTGGAACAGT+TGG | - | chr7.4:31068049-31068068 | MS.gene92763:intron | 40.0% | |
| TCTTTATGCTGACCTTTCAC+AGG | - | chr7.4:31068793-31068812 | MS.gene92763:intron | 40.0% | |
| TGTTGCTGCAGATGATTGTT+GGG | - | chr7.4:31068474-31068493 | MS.gene92763:intron | 40.0% | |
| TTAGTGATATACCCCATAGG+AGG | + | chr7.4:31067581-31067600 | None:intergenic | 40.0% | |
| TTGGTAAAACTCCTCCTATG+GGG | - | chr7.4:31067567-31067586 | MS.gene92763:intron | 40.0% | |
| TTGTTGCTGCAGATGATTGT+TGG | - | chr7.4:31068473-31068492 | MS.gene92763:intron | 40.0% | |
| TTTCCAACCTCAAGCATATC+AGG | + | chr7.4:31069744-31069763 | None:intergenic | 40.0% | |
| ! | CAGTTTGTGGGCTATTTCAA+AGG | - | chr7.4:31069800-31069819 | MS.gene92763:intron | 40.0% |
| ! | CTTGCTTGGACAACAGTTTT+TGG | + | chr7.4:31070590-31070609 | None:intergenic | 40.0% |
| ! | GAAGTGTATCCAGCTTTATG+GGG | - | chr7.4:31069354-31069373 | MS.gene92763:intron | 40.0% |
| ! | GAGAAGTGTATCCAGCTTTA+TGG | - | chr7.4:31069352-31069371 | MS.gene92763:intron | 40.0% |
| ! | GTGTCACTGCTTCATCATTA+GGG | - | chr7.4:31067495-31067514 | MS.gene92763:CDS | 40.0% |
| ! | TGTGTCACTGCTTCATCATT+AGG | - | chr7.4:31067494-31067513 | MS.gene92763:CDS | 40.0% |
| AACCTTCTTGCTAATGGCCT+TGG | - | chr7.4:31067548-31067567 | MS.gene92763:intron | 45.0% | |
| ACATCGCAACCTAGAAGAAG+AGG | + | chr7.4:31070001-31070020 | None:intergenic | 45.0% | |
| ACTTTAGCACCCCATAAAGC+TGG | + | chr7.4:31069366-31069385 | None:intergenic | 45.0% | |
| AGGTCCTCTTTCAGGAGATA+GGG | - | chr7.4:31070487-31070506 | MS.gene92763:intron | 45.0% | |
| ATGCTTGAGGTTGGAAATGG+AGG | - | chr7.4:31069747-31069766 | MS.gene92763:intron | 45.0% | |
| CATAGCAAGGGTCTTAAGCT+TGG | - | chr7.4:31068693-31068712 | MS.gene92763:CDS | 45.0% | |
| CCTTGGTAAAACTCCTCCTA+TGG | - | chr7.4:31067565-31067584 | MS.gene92763:intron | 45.0% | |
| CTTACCACGATAGATTCGCT+TGG | - | chr7.4:31070157-31070176 | MS.gene92763:intron | 45.0% | |
| GACCCTCTTGCATATTTGGT+TGG | - | chr7.4:31067469-31067488 | MS.gene92763:CDS | 45.0% | |
| GATCCTGATATGCTTGAGGT+TGG | - | chr7.4:31069738-31069757 | MS.gene92763:intron | 45.0% | |
| TACCAAGGCCATTAGCAAGA+AGG | + | chr7.4:31067553-31067572 | None:intergenic | 45.0% | |
| TGCTTGAGGTTGGAAATGGA+GGG | - | chr7.4:31069748-31069767 | MS.gene92763:intron | 45.0% | |
| TGGTGACCCTCTTGCATATT+TGG | - | chr7.4:31067465-31067484 | MS.gene92763:CDS | 45.0% | |
| TGTCCAAGCAAGAGACCTTT+GGG | - | chr7.4:31070598-31070617 | MS.gene92763:intron | 45.0% | |
| TTGTCCAAGCAAGAGACCTT+TGG | - | chr7.4:31070597-31070616 | MS.gene92763:intron | 45.0% | |
| ! | AGCTTTATGGGGTGCTAAAG+TGG | - | chr7.4:31069365-31069384 | MS.gene92763:intron | 45.0% |
| ! | ATTTTACCATTCCAGCCACC+AGG | + | chr7.4:31069617-31069636 | None:intergenic | 45.0% |
| ! | CCATAGGAGGAGTTTTACCA+AGG | + | chr7.4:31067568-31067587 | None:intergenic | 45.0% |
| ! | GCAAGAGCTTTAATGCCAGA+AGG | + | chr7.4:31068663-31068682 | None:intergenic | 45.0% |
| ! | GCTTCTGAAGGCCTCTATTA+AGG | + | chr7.4:31070526-31070545 | None:intergenic | 45.0% |
| ! | GCTTTATGGGGTGCTAAAGT+GGG | - | chr7.4:31069366-31069385 | MS.gene92763:intron | 45.0% |
| ! | GTAAGGCATTCAAGGGATCT+TGG | + | chr7.4:31070392-31070411 | None:intergenic | 45.0% |
| ! | TGGAGAGGAGTACGTAACAT+TGG | + | chr7.4:31069307-31069326 | None:intergenic | 45.0% |
| !! | AAACAAGGGCATCAGCTGTA+AGG | + | chr7.4:31068312-31068331 | None:intergenic | 45.0% |
| !! | GCTTGGACAACAGTTTTTGG+TGG | + | chr7.4:31070587-31070606 | None:intergenic | 45.0% |
| AACTCATGACCTAGGGAACC+AGG | + | chr7.4:31068843-31068862 | None:intergenic | 50.0% | |
| ATATGGGCAGGTCCTCTTTC+AGG | - | chr7.4:31070479-31070498 | MS.gene92763:intron | 50.0% | |
| ATTCAAGGGATCTTGGCCGT+TGG | + | chr7.4:31070385-31070404 | None:intergenic | 50.0% | |
| CAGGTCCTCTTTCAGGAGAT+AGG | - | chr7.4:31070486-31070505 | MS.gene92763:intron | 50.0% | |
| CATGTATCTTGAGCCCCGTT+TGG | - | chr7.4:31069843-31069862 | MS.gene92763:intron | 50.0% | |
| CCGAGCAAATACCAGTTTGC+CGG | + | chr7.4:31068110-31068129 | None:intergenic | 50.0% | |
| CCGGCAAACTGGTATTTGCT+CGG | - | chr7.4:31068107-31068126 | MS.gene92763:CDS | 50.0% | |
| GCTAATGCCCGAGTCATAAC+AGG | + | chr7.4:31069209-31069228 | None:intergenic | 50.0% | |
| GCTACCCTATCTCCTGAAAG+AGG | + | chr7.4:31070494-31070513 | None:intergenic | 50.0% | |
| TACGCCAAGCGAATCTATCG+TGG | + | chr7.4:31070164-31070183 | None:intergenic | 50.0% | |
| TAGGATGGAAGGTGATGCTG+AGG | - | chr7.4:31070198-31070217 | MS.gene92763:CDS | 50.0% | |
| TATGCTGAGCATGCAAGACC+TGG | - | chr7.4:31069596-31069615 | MS.gene92763:CDS | 50.0% | |
| TTGCAGGCTCCTCTTCTTCT+AGG | - | chr7.4:31069989-31070008 | MS.gene92763:intron | 50.0% | |
| ! | GCTGATGCCCTTGTTTCAAC+TGG | - | chr7.4:31068316-31068335 | MS.gene92763:intron | 50.0% |
| ACTCGGGCATTAGCGAAAGC+AGG | - | chr7.4:31069215-31069234 | MS.gene92763:intron | 55.0% | |
| CCAAGCAAGAGACCTTTGGG+AGG | - | chr7.4:31070601-31070620 | MS.gene92763:intron | 55.0% | |
| CCTCCCAAAGGTCTCTTGCT+TGG | + | chr7.4:31070604-31070623 | None:intergenic | 55.0% | |
| AGCATGCAAGACCTGGTGGC+TGG | - | chr7.4:31069603-31069622 | MS.gene92763:CDS | 60.0% | |
| GCAAGACCTGGTGGCTGGAA+TGG | - | chr7.4:31069608-31069627 | MS.gene92763:CDS | 60.0% | |
| GCTGAGCATGCAAGACCTGG+TGG | - | chr7.4:31069599-31069618 | MS.gene92763:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 31067455 | 31070846 | 31067455 | ID=MS.gene92763 |
| chr7.4 | mRNA | 31067455 | 31070846 | 31067455 | ID=MS.gene92763.t1;Parent=MS.gene92763 |
| chr7.4 | exon | 31070713 | 31070846 | 31070713 | ID=MS.gene92763.t1.exon1;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31070713 | 31070846 | 31070713 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31070184 | 31070242 | 31070184 | ID=MS.gene92763.t1.exon2;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31070184 | 31070242 | 31070184 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069928 | 31069984 | 31069928 | ID=MS.gene92763.t1.exon3;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069928 | 31069984 | 31069928 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069782 | 31069816 | 31069782 | ID=MS.gene92763.t1.exon4;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069782 | 31069816 | 31069782 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069568 | 31069671 | 31069568 | ID=MS.gene92763.t1.exon5;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069568 | 31069671 | 31069568 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069411 | 31069486 | 31069411 | ID=MS.gene92763.t1.exon6;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069411 | 31069486 | 31069411 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069261 | 31069319 | 31069261 | ID=MS.gene92763.t1.exon7;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069261 | 31069319 | 31069261 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31069034 | 31069099 | 31069034 | ID=MS.gene92763.t1.exon8;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31069034 | 31069099 | 31069034 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31068868 | 31068951 | 31068868 | ID=MS.gene92763.t1.exon9;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31068868 | 31068951 | 31068868 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31068672 | 31068736 | 31068672 | ID=MS.gene92763.t1.exon10;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31068672 | 31068736 | 31068672 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31068480 | 31068562 | 31068480 | ID=MS.gene92763.t1.exon11;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31068480 | 31068562 | 31068480 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31068216 | 31068306 | 31068216 | ID=MS.gene92763.t1.exon12;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31068216 | 31068306 | 31068216 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31068082 | 31068131 | 31068082 | ID=MS.gene92763.t1.exon13;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31068082 | 31068131 | 31068082 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31067679 | 31067822 | 31067679 | ID=MS.gene92763.t1.exon14;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31067679 | 31067822 | 31067679 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| chr7.4 | exon | 31067455 | 31067547 | 31067455 | ID=MS.gene92763.t1.exon15;Parent=MS.gene92763.t1 |
| chr7.4 | CDS | 31067455 | 31067547 | 31067455 | ID=cds.MS.gene92763.t1;Parent=MS.gene92763.t1 |
| Gene Sequence |
| Protein sequence |
