Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87685.t1 | XP_013449264.1 | 94.3 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 2.90E-225 | 790.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87685.t1 | Q9FT97 | 74.4 | 399 | 101 | 1 | 1 | 399 | 13 | 410 | 3.4e-182 | 639.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87685.t1 | A0A072U1H6 | 94.3 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 2.1e-225 | 790.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene87685 | 0.858035 | 1.09E-62 | -1.69E-46 |
| MS.gene050139 | MS.gene87685 | 0.835044 | 2.11E-56 | -1.69E-46 |
| MS.gene050168 | MS.gene87685 | 0.817485 | 3.22E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene87685 | 0.830305 | 3.17E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene87685 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene87685 | 0.82373 | 1.18E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene87685 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene87685 | -0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene87685 | 0.812184 | 4.82E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene87685 | 0.834503 | 2.89E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene87685 | 0.819732 | 9.95E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene87685 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene87685 | -0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene87685 | 0.806863 | 6.69E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene87685 | 0.843562 | 1.30E-58 | -1.69E-46 |
| MS.gene052389 | MS.gene87685 | 0.854257 | 1.39E-61 | -1.69E-46 |
| MS.gene053811 | MS.gene87685 | 0.809142 | 2.19E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene87685 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene054072 | MS.gene87685 | 0.809154 | 2.18E-50 | -1.69E-46 |
| MS.gene054083 | MS.gene87685 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene054093 | MS.gene87685 | 0.809702 | 1.66E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene87685 | 0.834756 | 2.49E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene87685 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene054468 | MS.gene87685 | 0.839274 | 1.75E-57 | -1.69E-46 |
| MS.gene054826 | MS.gene87685 | 0.833995 | 3.87E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene87685 | 0.826333 | 2.87E-54 | -1.69E-46 |
| MS.gene055217 | MS.gene87685 | 0.800169 | 1.63E-48 | -1.69E-46 |
| MS.gene055225 | MS.gene87685 | 0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene87685 | 0.801771 | 7.70E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene87685 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene87685 | 0.828911 | 6.91E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene87685 | 0.817007 | 4.12E-52 | -1.69E-46 |
| MS.gene058220 | MS.gene87685 | 0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene058378 | MS.gene87685 | 0.855397 | 6.48E-62 | -1.69E-46 |
| MS.gene058710 | MS.gene87685 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene060255 | MS.gene87685 | 0.814947 | 1.19E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene87685 | 0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene87685 | 0.803826 | 2.90E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene87685 | -0.808278 | 3.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87685 | MS.gene062191 | PPI |
| MS.gene07479 | MS.gene87685 | PPI |
| MS.gene61401 | MS.gene87685 | PPI |
| MS.gene004947 | MS.gene87685 | PPI |
| MS.gene87685 | MS.gene042962 | PPI |
| MS.gene87685 | MS.gene05536 | PPI |
| MS.gene87685 | MS.gene61402 | PPI |
| MS.gene005005 | MS.gene87685 | PPI |
| MS.gene87685 | MS.gene013419 | PPI |
| MS.gene87685 | MS.gene05535 | PPI |
| MS.gene87685 | MS.gene042963 | PPI |
| MS.gene004948 | MS.gene87685 | PPI |
| MS.gene87685 | MS.gene052452 | PPI |
| MS.gene06516 | MS.gene87685 | PPI |
| MS.gene86814 | MS.gene87685 | PPI |
| MS.gene069814 | MS.gene87685 | PPI |
| MS.gene059347 | MS.gene87685 | PPI |
| MS.gene87685 | MS.gene052453 | PPI |
| MS.gene062192 | MS.gene87685 | PPI |
| MS.gene07480 | MS.gene87685 | PPI |
| MS.gene87685 | MS.gene049391 | PPI |
| MS.gene87685 | MS.gene83318 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87685.t1 | MTR_7g073640 | 94.264 | 401 | 20 | 2 | 1 | 399 | 10 | 409 | 0.0 | 777 |
| MS.gene87685.t1 | MTR_7g073650 | 91.192 | 386 | 34 | 0 | 14 | 399 | 23 | 408 | 0.0 | 736 |
| MS.gene87685.t1 | MTR_6g069140 | 65.499 | 371 | 126 | 2 | 27 | 397 | 51 | 419 | 0.0 | 522 |
| MS.gene87685.t1 | MTR_6g086625 | 61.558 | 398 | 146 | 4 | 4 | 397 | 11 | 405 | 0.0 | 518 |
| MS.gene87685.t1 | MTR_6g086575 | 61.809 | 398 | 144 | 5 | 4 | 397 | 11 | 404 | 0.0 | 516 |
| MS.gene87685.t1 | MTR_1g077480 | 64.151 | 371 | 131 | 2 | 27 | 397 | 43 | 411 | 0.0 | 516 |
| MS.gene87685.t1 | MTR_1g077520 | 60.294 | 408 | 150 | 5 | 1 | 399 | 5 | 409 | 0.0 | 512 |
| MS.gene87685.t1 | MTR_3g094160 | 58.794 | 398 | 159 | 3 | 3 | 397 | 30 | 425 | 6.01e-167 | 474 |
| MS.gene87685.t1 | MTR_1g077520 | 62.727 | 330 | 115 | 2 | 1 | 322 | 5 | 334 | 5.55e-152 | 433 |
| MS.gene87685.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 101 | 225 | 1.50e-77 | 239 |
| MS.gene87685.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 185 | 309 | 4.33e-76 | 238 |
| MS.gene87685.t1 | MTR_0279s0030 | 94.400 | 125 | 7 | 0 | 275 | 399 | 250 | 374 | 1.10e-75 | 239 |
| MS.gene87685.t1 | MTR_1g078410 | 64.000 | 125 | 45 | 0 | 96 | 220 | 60 | 184 | 3.31e-52 | 172 |
| MS.gene87685.t1 | MTR_2g096530 | 25.641 | 390 | 192 | 14 | 3 | 303 | 5 | 385 | 1.01e-21 | 97.8 |
| MS.gene87685.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 2.05e-21 | 96.3 |
| MS.gene87685.t1 | MTR_8g089745 | 25.320 | 391 | 194 | 13 | 1 | 306 | 8 | 385 | 6.81e-21 | 95.1 |
| MS.gene87685.t1 | MTR_8g089740 | 26.531 | 392 | 189 | 14 | 1 | 306 | 3 | 381 | 1.08e-20 | 94.7 |
| MS.gene87685.t1 | MTR_8g089725 | 25.586 | 469 | 230 | 19 | 42 | 395 | 38 | 502 | 4.41e-20 | 92.4 |
| MS.gene87685.t1 | MTR_3g086580 | 25.843 | 356 | 172 | 11 | 38 | 303 | 36 | 389 | 1.10e-19 | 91.7 |
| MS.gene87685.t1 | MTR_8g089735 | 25.373 | 469 | 231 | 19 | 42 | 395 | 38 | 502 | 2.61e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87685.t1 | AT5G08380 | 74.436 | 399 | 101 | 1 | 1 | 399 | 13 | 410 | 0.0 | 627 |
| MS.gene87685.t1 | AT5G08370 | 66.027 | 365 | 122 | 2 | 31 | 395 | 29 | 391 | 0.0 | 516 |
| MS.gene87685.t1 | AT5G08370 | 65.668 | 367 | 124 | 2 | 29 | 395 | 1 | 365 | 0.0 | 515 |
| MS.gene87685.t1 | AT5G08380 | 76.645 | 304 | 71 | 0 | 1 | 304 | 13 | 316 | 6.13e-179 | 501 |
| MS.gene87685.t1 | AT3G56310 | 59.326 | 386 | 152 | 3 | 15 | 397 | 46 | 429 | 1.24e-164 | 469 |
| MS.gene87685.t1 | AT3G56310 | 55.699 | 386 | 142 | 4 | 15 | 397 | 46 | 405 | 5.25e-148 | 426 |
| MS.gene87685.t1 | AT3G26380 | 24.432 | 352 | 176 | 11 | 42 | 306 | 42 | 390 | 9.99e-18 | 85.1 |
| MS.gene87685.t1 | AT3G26380 | 24.432 | 352 | 176 | 11 | 42 | 306 | 42 | 390 | 1.89e-17 | 84.7 |
Find 100 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGGCTCCTCTTCTTCT+AGG | 0.179259 | 7.1:-28858211 | MS.gene87685:intron |
| ATATGGGCAGGTCCTCTTTC+AGG | 0.182460 | 7.1:-28857704 | MS.gene87685:CDS |
| GAGAAGTGTATCCAGCTTTA+TGG | 0.220990 | 7.1:-28858848 | MS.gene87685:CDS |
| TGGTGACCCTCTTGCATATT+TGG | 0.229764 | 7.1:-28860731 | MS.gene87685:CDS |
| TGTGTCACTGCTTCATCATT+AGG | 0.260692 | 7.1:-28860702 | MS.gene87685:CDS |
| CGAACTTAATCGCGATAATA+AGG | 0.278598 | 7.1:-28859698 | MS.gene87685:intron |
| ATATTGATATAACAGCTAAT+TGG | 0.300144 | 7.1:-28857637 | MS.gene87685:CDS |
| GCTTCTGAAGGCCTCTATTA+AGG | 0.306135 | 7.1:+28857660 | None:intergenic |
| TACCCATGATGCAAAAGTTT+TGG | 0.317269 | 7.1:+28859329 | None:intergenic |
| GTGTCACTGCTTCATCATTA+GGG | 0.339417 | 7.1:-28860701 | MS.gene87685:CDS |
| TTTCCAACCTCAAGCATATC+AGG | 0.349661 | 7.1:+28858459 | None:intergenic |
| CTTATTATCGCGATTAAGTT+CGG | 0.355063 | 7.1:+28859699 | None:intergenic |
| CATGGAGATAGTCTCTAATA+AGG | 0.359543 | 7.1:-28858158 | MS.gene87685:CDS |
| TGTTTGTGAGATGGTGGTTT+TGG | 0.366101 | 7.1:-28860751 | None:intergenic |
| AAGAAATCAACATTTCCTTC+TGG | 0.375662 | 7.1:-28859555 | MS.gene87685:CDS |
| TTGTCCAAGCAAGAGACCTT+TGG | 0.388653 | 7.1:-28857586 | MS.gene87685:CDS |
| CTGATGACATAAATGATTCA+TGG | 0.392813 | 7.1:-28858794 | MS.gene87685:CDS |
| GCGTACAAGCTAAGAAAGTT+AGG | 0.409733 | 7.1:-28858021 | MS.gene87685:CDS |
| AGAAGTGTATCCAGCTTTAT+GGG | 0.412861 | 7.1:-28858847 | MS.gene87685:CDS |
| GCTGATGCCCTTGTTTCAAC+TGG | 0.414005 | 7.1:-28859880 | MS.gene87685:CDS |
| TATTGATATAACAGCTAATT+GGG | 0.420644 | 7.1:-28857636 | MS.gene87685:CDS |
| TGTCCAAGCAAGAGACCTTT+GGG | 0.423545 | 7.1:-28857585 | MS.gene87685:CDS |
| CCTTGGTAAAACTCCTCCTA+TGG | 0.424348 | 7.1:-28860631 | MS.gene87685:CDS |
| CCGAGCAAATACCAGTTTGC+CGG | 0.426356 | 7.1:+28860089 | None:intergenic |
| TATTGTTCACTTCAGTTTGT+GGG | 0.427431 | 7.1:-28858412 | MS.gene87685:CDS |
| TTGTTGCTGCAGATGATTGT+TGG | 0.434548 | 7.1:-28859723 | MS.gene87685:intron |
| AGAAGAAACCTTCTTGCTAA+TGG | 0.435698 | 7.1:-28860654 | MS.gene87685:CDS |
| GCTAATGCCCGAGTCATAAC+AGG | 0.436420 | 7.1:+28858994 | None:intergenic |
| AACCTTCTTGCTAATGGCCT+TGG | 0.440891 | 7.1:-28860648 | MS.gene87685:CDS |
| CAGGTCCTCTTTCAGGAGAT+AGG | 0.444331 | 7.1:-28857697 | MS.gene87685:CDS |
| GACCCTCTTGCATATTTGGT+TGG | 0.448523 | 7.1:-28860727 | MS.gene87685:CDS |
| CTTGGAATTTATTCAGATGC+AGG | 0.449478 | 7.1:-28859489 | MS.gene87685:CDS |
| AGCTTTATGGGGTGCTAAAG+TGG | 0.461428 | 7.1:-28858835 | MS.gene87685:CDS |
| TCATTTAGAACTCATGCTAC+TGG | 0.461759 | 7.1:+28857350 | None:intergenic |
| CCTCCCAAAGGTCTCTTGCT+TGG | 0.464465 | 7.1:+28857582 | None:intergenic |
| AGCATGCAAGACCTGGTGGC+TGG | 0.466104 | 7.1:-28858597 | MS.gene87685:CDS |
| GTGCTAAAGTGGGAAATAGT+TGG | 0.469009 | 7.1:-28858824 | MS.gene87685:CDS |
| ATATTGTTCACTTCAGTTTG+TGG | 0.470328 | 7.1:-28858413 | MS.gene87685:CDS |
| TACCAAGGCCATTAGCAAGA+AGG | 0.473441 | 7.1:+28860646 | None:intergenic |
| TGTTGCTGCAGATGATTGTT+GGG | 0.474807 | 7.1:-28859722 | MS.gene87685:intron |
| GAATGATAGAACCTTTGAAA+TGG | 0.475092 | 7.1:+28858389 | None:intergenic |
| TTATGTACCTATGTTGACAT+AGG | 0.479023 | 7.1:+28859837 | None:intergenic |
| AATAAAATGCCTGGTTCCCT+AGG | 0.483116 | 7.1:-28859369 | MS.gene87685:CDS |
| GCTGTTGTGTTCCTTAATAG+AGG | 0.483389 | 7.1:-28857671 | MS.gene87685:CDS |
| CATAGCAAGGGTCTTAAGCT+TGG | 0.485258 | 7.1:-28859507 | MS.gene87685:CDS |
| CAGTTTGTGGGCCATTTCAA+AGG | 0.486288 | 7.1:-28858400 | MS.gene87685:intron |
| TCACATAGCGAAAAGAAGAT+TGG | 0.486370 | 7.1:+28858958 | None:intergenic |
| ATGCTTGAGGTTGGAAATGG+AGG | 0.493055 | 7.1:-28858453 | MS.gene87685:CDS |
| GATATGCTTGAGGTTGGAAA+TGG | 0.493237 | 7.1:-28858456 | MS.gene87685:CDS |
| TATGATAACTGTAACAATGA+TGG | 0.496661 | 7.1:-28859200 | MS.gene87685:CDS |
| TATCATACAGGTGGAACAGT+TGG | 0.505083 | 7.1:-28860147 | MS.gene87685:intron |
| TGCAGATTATGTTCATAGCA+AGG | 0.510065 | 7.1:-28859520 | MS.gene87685:CDS |
| TCAACTGGTCTATATAAGCT+TGG | 0.514706 | 7.1:-28859865 | MS.gene87685:CDS |
| GCAAGACCTGGTGGCTGGAA+TGG | 0.519508 | 7.1:-28858592 | MS.gene87685:intron |
| TGATGACATAAATGATTCAT+GGG | 0.521279 | 7.1:-28858793 | MS.gene87685:CDS |
| CTTGGTAAAACTCCTCCTAT+GGG | 0.521865 | 7.1:-28860630 | MS.gene87685:CDS |
| ACATGTAGCAATAAAATGCC+TGG | 0.522248 | 7.1:-28859378 | MS.gene87685:CDS |
| AACTCATGACCTAGGGAACC+AGG | 0.526273 | 7.1:+28859360 | None:intergenic |
| AGGTCCTCTTTCAGGAGATA+GGG | 0.534637 | 7.1:-28857696 | MS.gene87685:CDS |
| GATCCTGATATGCTTGAGGT+TGG | 0.538064 | 7.1:-28858462 | MS.gene87685:CDS |
| TCATTAGGGAACAACTATGA+TGG | 0.538551 | 7.1:-28860687 | MS.gene87685:CDS |
| GCTAAGAAAGTTAGGATGGA+AGG | 0.541248 | 7.1:-28858013 | MS.gene87685:CDS |
| ACTTTAGCACCCCATAAAGC+TGG | 0.545198 | 7.1:+28858837 | None:intergenic |
| GCAGATTATGTTCATAGCAA+GGG | 0.548297 | 7.1:-28859519 | MS.gene87685:CDS |
| ACATCACAACCTAGAAGAAG+AGG | 0.551396 | 7.1:+28858202 | None:intergenic |
| TTGGAATTTATTCAGATGCA+GGG | 0.559186 | 7.1:-28859488 | MS.gene87685:intron |
| CTTATTAGAGACTATCTCCA+TGG | 0.563876 | 7.1:+28858159 | None:intergenic |
| GCTACCCTATCTCCTGAAAG+AGG | 0.565978 | 7.1:+28857692 | None:intergenic |
| ACAAGCTAAGAAAGTTAGGA+TGG | 0.568444 | 7.1:-28858017 | MS.gene87685:CDS |
| TAGGTATCCTGTTATGACTC+GGG | 0.568609 | 7.1:-28859001 | MS.gene87685:CDS |
| CATCTTGAAACTCATGACCT+AGG | 0.568843 | 7.1:+28859352 | None:intergenic |
| TTATATCAATATGCTTCTGA+AGG | 0.572424 | 7.1:+28857648 | None:intergenic |
| ACATAAATGATTCATGGGAA+AGG | 0.572873 | 7.1:-28858788 | MS.gene87685:intron |
| ATCTTGAAACTCATGACCTA+GGG | 0.575933 | 7.1:+28859353 | None:intergenic |
| ATAGGTATCCTGTTATGACT+CGG | 0.580091 | 7.1:-28859002 | MS.gene87685:intron |
| GCTTTATGGGGTGCTAAAGT+GGG | 0.582782 | 7.1:-28858834 | MS.gene87685:CDS |
| GGATACACCTATGTCAACAT+AGG | 0.584008 | 7.1:-28859844 | MS.gene87685:intron |
| ACTCGGGCATTAGCGAAAGC+AGG | 0.584046 | 7.1:-28858985 | MS.gene87685:CDS |
| TATATAGACCAGTTGAAACA+AGG | 0.586502 | 7.1:+28859872 | None:intergenic |
| TTTATGCAGTATGATTTCAA+GGG | 0.594421 | 7.1:-28858644 | MS.gene87685:intron |
| AAATGTGACTAAAGAGACCA+TGG | 0.606791 | 7.1:-28858176 | MS.gene87685:CDS |
| TACAATGAATTACCTCCCAA+AGG | 0.608422 | 7.1:+28857570 | None:intergenic |
| AACAGATCCTGATATGCTTG+AGG | 0.609688 | 7.1:-28858466 | MS.gene87685:intron |
| ACAGCTAATTGGGATGACAT+TGG | 0.612622 | 7.1:-28857626 | MS.gene87685:CDS |
| GAAGTTATTGCAGTTAACCA+AGG | 0.614628 | 7.1:-28858136 | MS.gene87685:intron |
| TAGGATGGAAGGTGATGCTG+AGG | 0.614856 | 7.1:-28858002 | MS.gene87685:intron |
| GCAAGAGCTTTAATGCCAGA+AGG | 0.618630 | 7.1:+28859540 | None:intergenic |
| AAACCAACCAAATATGCAAG+AGG | 0.622631 | 7.1:+28860724 | None:intergenic |
| TGCTTGAGGTTGGAAATGGA+GGG | 0.639239 | 7.1:-28858452 | MS.gene87685:CDS |
| TTTACCACGACAGATTCGCT+TGG | 0.645443 | 7.1:-28858043 | MS.gene87685:intron |
| ATATAGACCAGTTGAAACAA+GGG | 0.648146 | 7.1:+28859873 | None:intergenic |
| TATGCTGAGCATGCAAGACC+TGG | 0.649983 | 7.1:-28858604 | MS.gene87685:CDS |
| GCTGAGCATGCAAGACCTGG+TGG | 0.651335 | 7.1:-28858601 | MS.gene87685:CDS |
| AATTTAGTGATATACCCCAT+AGG | 0.655568 | 7.1:+28860615 | None:intergenic |
| TTAGTGATATACCCCATAGG+AGG | 0.659380 | 7.1:+28860618 | None:intergenic |
| GAAGTGTATCCAGCTTTATG+GGG | 0.664588 | 7.1:-28858846 | MS.gene87685:CDS |
| AACCAACCAAATATGCAAGA+GGG | 0.677174 | 7.1:+28860725 | None:intergenic |
| TTGGTAAAACTCCTCCTATG+GGG | 0.687837 | 7.1:-28860629 | MS.gene87685:intron |
| CCAAGCAAGAGACCTTTGGG+AGG | 0.733936 | 7.1:-28857582 | MS.gene87685:intron |
| ATGGAACAAATGCCACTGTG+AGG | 0.770299 | 7.1:-28859181 | MS.gene87685:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAATACAAG+GGG | + | chr7.1:28858658-28858677 | None:intergenic | 10.0% |
| !! | GAATAAAAAATAAAATACAA+GGG | + | chr7.1:28858659-28858678 | None:intergenic | 10.0% |
| !! | TGAATAAAAAATAAAATACA+AGG | + | chr7.1:28858660-28858679 | None:intergenic | 10.0% |
| !! | ATAAAAAATAAAATACAAGG+GGG | + | chr7.1:28858657-28858676 | None:intergenic | 15.0% |
| !! | TTACTTTCTATTATGAATTA+TGG | - | chr7.1:28857623-28857642 | MS.gene87685:CDS | 15.0% |
| !! | AAATTGATGAAAAAATCATC+CGG | - | chr7.1:28857994-28858013 | MS.gene87685:intron | 20.0% |
| !! | ACAAACAAATAAAGTTTCAT+TGG | + | chr7.1:28859229-28859248 | None:intergenic | 20.0% |
| !! | AGTAACATATTACAATGATT+AGG | + | chr7.1:28860022-28860041 | None:intergenic | 20.0% |
| !! | ATATTGATATAACAGCTAAT+TGG | - | chr7.1:28860465-28860484 | MS.gene87685:intron | 20.0% |
| !! | CAAACTAATCTCTTATATAT+AGG | + | chr7.1:28857781-28857800 | None:intergenic | 20.0% |
| !! | CAACAAAAAATTATGGATAA+AGG | + | chr7.1:28858365-28858384 | None:intergenic | 20.0% |
| !! | TAATCAAGTAAAATAACCAT+TGG | + | chr7.1:28858861-28858880 | None:intergenic | 20.0% |
| !! | TATTGATATAACAGCTAATT+GGG | - | chr7.1:28860466-28860485 | MS.gene87685:intron | 20.0% |
| !! | TCTAAAGATTTATGATACTA+AGG | - | chr7.1:28857912-28857931 | MS.gene87685:intron | 20.0% |
| !! | TGATAAGATAAAAGTCTATT+AGG | + | chr7.1:28858998-28859017 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTTCTATCATAC+AGG | - | chr7.1:28857943-28857962 | MS.gene87685:intron | 20.0% |
| !!! | ATAGATTTTGTCTAATAGTT+TGG | - | chr7.1:28860324-28860343 | MS.gene87685:intron | 20.0% |
| !!! | ATGTTTTTTTGGTTAGATAT+GGG | - | chr7.1:28860382-28860401 | MS.gene87685:intron | 20.0% |
| !!! | GGTTATTTTACTTGATTATA+GGG | - | chr7.1:28858863-28858882 | MS.gene87685:intron | 20.0% |
| !!! | TGAAACTTTATTTGTTTGTT+AGG | - | chr7.1:28859230-28859249 | MS.gene87685:intron | 20.0% |
| !!! | TGGTTATTTTACTTGATTAT+AGG | - | chr7.1:28858862-28858881 | MS.gene87685:intron | 20.0% |
| ! | AAGATATTCATAGAGATTGA+TGG | - | chr7.1:28857707-28857726 | MS.gene87685:CDS | 25.0% |
| ! | ACCATGACATTCTTATATAT+AGG | - | chr7.1:28859082-28859101 | MS.gene87685:intron | 25.0% |
| ! | ACCTATATATAAGAATGTCA+TGG | + | chr7.1:28859086-28859105 | None:intergenic | 25.0% |
| ! | AGATATTCATAGAGATTGAT+GGG | - | chr7.1:28857708-28857727 | MS.gene87685:intron | 25.0% |
| ! | AGATGCATGTAAAATATCAA+TGG | + | chr7.1:28857895-28857914 | None:intergenic | 25.0% |
| ! | ATCAGCTATAATTAGTTGAT+AGG | + | chr7.1:28857852-28857871 | None:intergenic | 25.0% |
| ! | CATGATTTCACATAAATCAA+AGG | + | chr7.1:28859832-28859851 | None:intergenic | 25.0% |
| ! | GTGTAGAAACTAATTCAAAT+AGG | - | chr7.1:28859806-28859825 | MS.gene87685:intron | 25.0% |
| ! | TAGCAATACTTTAATTAGCA+AGG | - | chr7.1:28857552-28857571 | MS.gene87685:intron | 25.0% |
| ! | TAGTATTATTTGTAGGGAAT+TGG | - | chr7.1:28860159-28860178 | MS.gene87685:intron | 25.0% |
| ! | TATGATAACTGTAACAATGA+TGG | - | chr7.1:28858902-28858921 | MS.gene87685:intron | 25.0% |
| ! | TGATGACATAAATGATTCAT+GGG | - | chr7.1:28859309-28859328 | MS.gene87685:intron | 25.0% |
| ! | TTATATCAATATGCTTCTGA+AGG | + | chr7.1:28860457-28860476 | None:intergenic | 25.0% |
| ! | TTTATGCAGTATGATTTCAA+GGG | - | chr7.1:28859458-28859477 | MS.gene87685:intron | 25.0% |
| ! | TTTGGCTAAACAACTTAATT+AGG | - | chr7.1:28859763-28859782 | MS.gene87685:intron | 25.0% |
| !! | AATTAAGTTGTTTAGCCAAA+CGG | + | chr7.1:28859763-28859782 | None:intergenic | 25.0% |
| !! | CATTGAACTACTCATATTTT+AGG | - | chr7.1:28860205-28860224 | MS.gene87685:intron | 25.0% |
| !! | CCAAATACTGTTATGTTTTA+GGG | - | chr7.1:28858511-28858530 | MS.gene87685:intron | 25.0% |
| !! | TCATACGTAATTTTGAACTT+TGG | - | chr7.1:28859015-28859034 | MS.gene87685:intron | 25.0% |
| !! | TCCAAATACTGTTATGTTTT+AGG | - | chr7.1:28858510-28858529 | MS.gene87685:intron | 25.0% |
| !! | TTTTATGCAGTATGATTTCA+AGG | - | chr7.1:28859457-28859476 | MS.gene87685:intron | 25.0% |
| !! | TTTTGCGAAGTCAAAAAATA+AGG | - | chr7.1:28860245-28860264 | MS.gene87685:intron | 25.0% |
| !!! | AATTCCTTCTCTTAATTTGT+TGG | - | chr7.1:28857506-28857525 | MS.gene87685:intron | 25.0% |
| !!! | CATGTTTTTTTGGTTAGATA+TGG | - | chr7.1:28860381-28860400 | MS.gene87685:intron | 25.0% |
| !!! | TGATTTGAGTTGAAGATTAA+AGG | + | chr7.1:28859051-28859070 | None:intergenic | 25.0% |
| !!! | TTCAGTGTTTTTACTTTGTA+AGG | - | chr7.1:28858316-28858335 | MS.gene87685:intron | 25.0% |
| !!! | TTCTTATCTGCATGTTTTTT+TGG | - | chr7.1:28860371-28860390 | MS.gene87685:intron | 25.0% |
| !!! | TTTTTTTTCTATCATACAGG+TGG | - | chr7.1:28857946-28857965 | MS.gene87685:intron | 25.0% |
| AAGAAATCAACATTTCCTTC+TGG | - | chr7.1:28858547-28858566 | MS.gene87685:intron | 30.0% | |
| AATTTAGTGATATACCCCAT+AGG | + | chr7.1:28857490-28857509 | None:intergenic | 30.0% | |
| ACATAAATGATTCATGGGAA+AGG | - | chr7.1:28859314-28859333 | MS.gene87685:intron | 30.0% | |
| ATATAGACCAGTTGAAACAA+GGG | + | chr7.1:28858232-28858251 | None:intergenic | 30.0% | |
| ATATTGTTCACTTCAGTTTG+TGG | - | chr7.1:28859689-28859708 | MS.gene87685:intron | 30.0% | |
| CAAATAAAGTTTCATTGGAG+AGG | + | chr7.1:28859224-28859243 | None:intergenic | 30.0% | |
| CCCTAAAACATAACAGTATT+TGG | + | chr7.1:28858514-28858533 | None:intergenic | 30.0% | |
| CGTCTCTAGTATTATTTGTA+GGG | - | chr7.1:28860153-28860172 | MS.gene87685:intron | 30.0% | |
| CTGATGACATAAATGATTCA+TGG | - | chr7.1:28859308-28859327 | MS.gene87685:intron | 30.0% | |
| CTTATTATCGCGATTAAGTT+CGG | + | chr7.1:28858406-28858425 | None:intergenic | 30.0% | |
| GAATCCAACAAATTAAGAGA+AGG | + | chr7.1:28857513-28857532 | None:intergenic | 30.0% | |
| GGATACTAAGGTTACAAATA+AGG | - | chr7.1:28860621-28860640 | MS.gene87685:intron | 30.0% | |
| TATATAGACCAGTTGAAACA+AGG | + | chr7.1:28858233-28858252 | None:intergenic | 30.0% | |
| TATTGTTCACTTCAGTTTGT+GGG | - | chr7.1:28859690-28859709 | MS.gene87685:intron | 30.0% | |
| TCGTCTCTAGTATTATTTGT+AGG | - | chr7.1:28860152-28860171 | MS.gene87685:intron | 30.0% | |
| TCTGCAGCAACAAAAAATTA+TGG | + | chr7.1:28858372-28858391 | None:intergenic | 30.0% | |
| TTATGTACCTATGTTGACAT+AGG | + | chr7.1:28858268-28858287 | None:intergenic | 30.0% | |
| TTGGAATTTATTCAGATGCA+GGG | - | chr7.1:28858614-28858633 | MS.gene87685:CDS | 30.0% | |
| TTTATAGACATCTGAGAAAC+TGG | - | chr7.1:28858126-28858145 | MS.gene87685:intron | 30.0% | |
| ! | ATTAAGTTGTTTAGCCAAAC+GGG | + | chr7.1:28859762-28859781 | None:intergenic | 30.0% |
| ! | GAATGATAGAACCTTTGAAA+TGG | + | chr7.1:28859716-28859735 | None:intergenic | 30.0% |
| ! | TATGTTTTACTGCGTTTTGT+TGG | - | chr7.1:28860600-28860619 | MS.gene87685:intron | 30.0% |
| !! | GTTTTATTAGCTAGTAGCTA+AGG | + | chr7.1:28859431-28859450 | None:intergenic | 30.0% |
| !!! | CTTCTTTTTTTCACCTATGA+AGG | - | chr7.1:28859864-28859883 | MS.gene87685:CDS | 30.0% |
| !!! | TGTTATGTTTTAGGGTAATC+TGG | - | chr7.1:28858519-28858538 | MS.gene87685:intron | 30.0% |
| AAACCAACCAAATATGCAAG+AGG | + | chr7.1:28857381-28857400 | None:intergenic | 35.0% | |
| AAACCATGCACTCAATTTGT+TGG | - | chr7.1:28859340-28859359 | MS.gene87685:CDS | 35.0% | |
| AAATGTGACTAAAGAGACCA+TGG | - | chr7.1:28859926-28859945 | MS.gene87685:intron | 35.0% | |
| AACCAACCAAATATGCAAGA+GGG | + | chr7.1:28857380-28857399 | None:intergenic | 35.0% | |
| ACAAGCTAAGAAAGTTAGGA+TGG | - | chr7.1:28860085-28860104 | MS.gene87685:intron | 35.0% | |
| ACATGTAAGATACCTGTGAA+AGG | + | chr7.1:28858710-28858729 | None:intergenic | 35.0% | |
| ACATGTAGCAATAAAATGCC+TGG | - | chr7.1:28858724-28858743 | MS.gene87685:intron | 35.0% | |
| AGAAGAAACCTTCTTGCTAA+TGG | - | chr7.1:28857448-28857467 | MS.gene87685:intron | 35.0% | |
| ATAGGTATCCTGTTATGACT+CGG | - | chr7.1:28859100-28859119 | MS.gene87685:intron | 35.0% | |
| ATAGGTGAAAAAAAGAAGCC+AGG | + | chr7.1:28859862-28859881 | None:intergenic | 35.0% | |
| ATCAAGTGCTATGTAACCAA+TGG | - | chr7.1:28858842-28858861 | MS.gene87685:CDS | 35.0% | |
| ATCTTGAAACTCATGACCTA+GGG | + | chr7.1:28858752-28858771 | None:intergenic | 35.0% | |
| CATGGAGATAGTCTCTAATA+AGG | - | chr7.1:28859944-28859963 | MS.gene87685:intron | 35.0% | |
| CGAACTTAATCGCGATAATA+AGG | - | chr7.1:28858404-28858423 | MS.gene87685:CDS | 35.0% | |
| CTTATTAGAGACTATCTCCA+TGG | + | chr7.1:28859946-28859965 | None:intergenic | 35.0% | |
| CTTGGAATTTATTCAGATGC+AGG | - | chr7.1:28858613-28858632 | MS.gene87685:CDS | 35.0% | |
| GAAGTTATTGCAGTTAACCA+AGG | - | chr7.1:28859966-28859985 | MS.gene87685:intron | 35.0% | |
| GCAGATTATGTTCATAGCAA+GGG | - | chr7.1:28858583-28858602 | MS.gene87685:intron | 35.0% | |
| GTGAAATCATGTATTGTACC+TGG | - | chr7.1:28859841-28859860 | MS.gene87685:intron | 35.0% | |
| TACAATGAATTACCTCCCAA+AGG | + | chr7.1:28860535-28860554 | None:intergenic | 35.0% | |
| TCACATAGCGAAAAGAAGAT+TGG | + | chr7.1:28859147-28859166 | None:intergenic | 35.0% | |
| TCATTAGGGAACAACTATGA+TGG | - | chr7.1:28857415-28857434 | MS.gene87685:CDS | 35.0% | |
| TGCAGATTATGTTCATAGCA+AGG | - | chr7.1:28858582-28858601 | MS.gene87685:intron | 35.0% | |
| ! | AGAAGTGTATCCAGCTTTAT+GGG | - | chr7.1:28859255-28859274 | MS.gene87685:intron | 35.0% |
| ! | ATGCCAAAACTTTTGCATCA+TGG | - | chr7.1:28858770-28858789 | MS.gene87685:intron | 35.0% |
| ! | TACCCATGATGCAAAAGTTT+TGG | + | chr7.1:28858776-28858795 | None:intergenic | 35.0% |
| ! | TCAACTGGTCTATATAAGCT+TGG | - | chr7.1:28858237-28858256 | MS.gene87685:intron | 35.0% |
| ! | TCTTCTTTTCGCTATGTGAA+TGG | - | chr7.1:28859148-28859167 | MS.gene87685:intron | 35.0% |
| ! | TGCCAAAACTTTTGCATCAT+GGG | - | chr7.1:28858771-28858790 | MS.gene87685:intron | 35.0% |
| ! | TTAAGTTGTTTAGCCAAACG+GGG | + | chr7.1:28859761-28859780 | None:intergenic | 35.0% |
| !! | TATTTTTGACTACCTCACAG+TGG | + | chr7.1:28858936-28858955 | None:intergenic | 35.0% |
| !!! | ATGTTTTAGGGTAATCTGGT+GGG | - | chr7.1:28858523-28858542 | MS.gene87685:intron | 35.0% |
| !!! | TATGTTTTAGGGTAATCTGG+TGG | - | chr7.1:28858522-28858541 | MS.gene87685:intron | 35.0% |
| !!! | TTTTTTGGTTAGATATGGGC+AGG | - | chr7.1:28860386-28860405 | MS.gene87685:intron | 35.0% |
| AACAGATCCTGATATGCTTG+AGG | - | chr7.1:28859636-28859655 | MS.gene87685:intron | 40.0% | |
| AACCAAGGTGAGGCATAATT+TGG | - | chr7.1:28859981-28860000 | MS.gene87685:intron | 40.0% | |
| AATAAAATGCCTGGTTCCCT+AGG | - | chr7.1:28858733-28858752 | MS.gene87685:intron | 40.0% | |
| ACAGCTAATTGGGATGACAT+TGG | - | chr7.1:28860476-28860495 | MS.gene87685:intron | 40.0% | |
| ACATCACAACCTAGAAGAAG+AGG | + | chr7.1:28859903-28859922 | None:intergenic | 40.0% | |
| ACCAAGGTGAGGCATAATTT+GGG | - | chr7.1:28859982-28860001 | MS.gene87685:intron | 40.0% | |
| AGCACACTGTAATGCATTCA+AGG | + | chr7.1:28860299-28860318 | None:intergenic | 40.0% | |
| AGCCTGCAATAAACCTTCAT+AGG | + | chr7.1:28859880-28859899 | None:intergenic | 40.0% | |
| AGCTAGTAGCTAAGGATAGT+AGG | + | chr7.1:28859423-28859442 | None:intergenic | 40.0% | |
| CACCTATGAAGGTTTATTGC+AGG | - | chr7.1:28859875-28859894 | MS.gene87685:CDS | 40.0% | |
| CATCTTGAAACTCATGACCT+AGG | + | chr7.1:28858753-28858772 | None:intergenic | 40.0% | |
| CTTGGTAAAACTCCTCCTAT+GGG | - | chr7.1:28857472-28857491 | MS.gene87685:intron | 40.0% | |
| GAAAAAATCATCCGGCAAAC+TGG | - | chr7.1:28858002-28858021 | MS.gene87685:intron | 40.0% | |
| GAATTGGATTCTCTGCTGTT+AGG | - | chr7.1:28860175-28860194 | MS.gene87685:intron | 40.0% | |
| GATATGCTTGAGGTTGGAAA+TGG | - | chr7.1:28859646-28859665 | MS.gene87685:intron | 40.0% | |
| GCACACTGTAATGCATTCAA+GGG | + | chr7.1:28860298-28860317 | None:intergenic | 40.0% | |
| GCGTACAAGCTAAGAAAGTT+AGG | - | chr7.1:28860081-28860100 | MS.gene87685:intron | 40.0% | |
| GCTAAGAAAGTTAGGATGGA+AGG | - | chr7.1:28860089-28860108 | MS.gene87685:intron | 40.0% | |
| GCTGTTGTGTTCCTTAATAG+AGG | - | chr7.1:28860431-28860450 | MS.gene87685:intron | 40.0% | |
| GGATACACCTATGTCAACAT+AGG | - | chr7.1:28858258-28858277 | MS.gene87685:intron | 40.0% | |
| GTAATGCATTCAAGGGATCT+CGG | + | chr7.1:28860291-28860310 | None:intergenic | 40.0% | |
| GTACCAACAAATTGAGTGCA+TGG | + | chr7.1:28859346-28859365 | None:intergenic | 40.0% | |
| GTGCTAAAGTGGGAAATAGT+TGG | - | chr7.1:28859278-28859297 | MS.gene87685:intron | 40.0% | |
| TAGGTATCCTGTTATGACTC+GGG | - | chr7.1:28859101-28859120 | MS.gene87685:intron | 40.0% | |
| TATCATACAGGTGGAACAGT+TGG | - | chr7.1:28857955-28857974 | MS.gene87685:intron | 40.0% | |
| TATTGCAGTTAACCAAGGTG+AGG | - | chr7.1:28859971-28859990 | MS.gene87685:intron | 40.0% | |
| TCTTTATGCTGACCTTTCAC+AGG | - | chr7.1:28858695-28858714 | MS.gene87685:intron | 40.0% | |
| TGTTGCTGCAGATGATTGTT+GGG | - | chr7.1:28858380-28858399 | MS.gene87685:intron | 40.0% | |
| TTAGTGATATACCCCATAGG+AGG | + | chr7.1:28857487-28857506 | None:intergenic | 40.0% | |
| TTGGTAAAACTCCTCCTATG+GGG | - | chr7.1:28857473-28857492 | MS.gene87685:intron | 40.0% | |
| TTGTTGCTGCAGATGATTGT+TGG | - | chr7.1:28858379-28858398 | MS.gene87685:intron | 40.0% | |
| TTTCCAACCTCAAGCATATC+AGG | + | chr7.1:28859646-28859665 | None:intergenic | 40.0% | |
| ! | CTTGCTTGGACAACAGTTTT+TGG | + | chr7.1:28860509-28860528 | None:intergenic | 40.0% |
| ! | GAAGTGTATCCAGCTTTATG+GGG | - | chr7.1:28859256-28859275 | MS.gene87685:intron | 40.0% |
| ! | GAGAAGTGTATCCAGCTTTA+TGG | - | chr7.1:28859254-28859273 | MS.gene87685:intron | 40.0% |
| ! | GTGTCACTGCTTCATCATTA+GGG | - | chr7.1:28857401-28857420 | MS.gene87685:CDS | 40.0% |
| ! | TGTGTCACTGCTTCATCATT+AGG | - | chr7.1:28857400-28857419 | MS.gene87685:CDS | 40.0% |
| !! | CTGCGTTTTGTTGGATACTA+AGG | - | chr7.1:28860609-28860628 | MS.gene87685:intron | 40.0% |
| AACCTTCTTGCTAATGGCCT+TGG | - | chr7.1:28857454-28857473 | MS.gene87685:intron | 45.0% | |
| ACCCAAATTATGCCTCACCT+TGG | + | chr7.1:28859986-28860005 | None:intergenic | 45.0% | |
| ACTTTAGCACCCCATAAAGC+TGG | + | chr7.1:28859268-28859287 | None:intergenic | 45.0% | |
| AGGTCCTCTTTCAGGAGATA+GGG | - | chr7.1:28860406-28860425 | MS.gene87685:intron | 45.0% | |
| ATGCTTGAGGTTGGAAATGG+AGG | - | chr7.1:28859649-28859668 | MS.gene87685:intron | 45.0% | |
| ATGGAACAAATGCCACTGTG+AGG | - | chr7.1:28858921-28858940 | MS.gene87685:intron | 45.0% | |
| CAGTTTGTGGGCCATTTCAA+AGG | - | chr7.1:28859702-28859721 | MS.gene87685:CDS | 45.0% | |
| CATAGCAAGGGTCTTAAGCT+TGG | - | chr7.1:28858595-28858614 | MS.gene87685:CDS | 45.0% | |
| CCTTGGTAAAACTCCTCCTA+TGG | - | chr7.1:28857471-28857490 | MS.gene87685:intron | 45.0% | |
| GACCCTCTTGCATATTTGGT+TGG | - | chr7.1:28857375-28857394 | MS.gene87685:CDS | 45.0% | |
| GATCCTGATATGCTTGAGGT+TGG | - | chr7.1:28859640-28859659 | MS.gene87685:intron | 45.0% | |
| TACCAAGGCCATTAGCAAGA+AGG | + | chr7.1:28857459-28857478 | None:intergenic | 45.0% | |
| TGCTTGAGGTTGGAAATGGA+GGG | - | chr7.1:28859650-28859669 | MS.gene87685:intron | 45.0% | |
| TGGTGACCCTCTTGCATATT+TGG | - | chr7.1:28857371-28857390 | MS.gene87685:CDS | 45.0% | |
| TGTCCAAGCAAGAGACCTTT+GGG | - | chr7.1:28860517-28860536 | MS.gene87685:intron | 45.0% | |
| TTGTCCAAGCAAGAGACCTT+TGG | - | chr7.1:28860516-28860535 | MS.gene87685:intron | 45.0% | |
| TTTACCACGACAGATTCGCT+TGG | - | chr7.1:28860059-28860078 | MS.gene87685:intron | 45.0% | |
| ! | AGCTTTATGGGGTGCTAAAG+TGG | - | chr7.1:28859267-28859286 | MS.gene87685:intron | 45.0% |
| ! | ATTTTACCATTCCAGCCACC+AGG | + | chr7.1:28859519-28859538 | None:intergenic | 45.0% |
| ! | CCATAGGAGGAGTTTTACCA+AGG | + | chr7.1:28857474-28857493 | None:intergenic | 45.0% |
| ! | GCAAGAGCTTTAATGCCAGA+AGG | + | chr7.1:28858565-28858584 | None:intergenic | 45.0% |
| ! | GCTTCTGAAGGCCTCTATTA+AGG | + | chr7.1:28860445-28860464 | None:intergenic | 45.0% |
| ! | GCTTTATGGGGTGCTAAAGT+GGG | - | chr7.1:28859268-28859287 | MS.gene87685:intron | 45.0% |
| ! | TGGAGAGGAGTACGTAACAT+TGG | + | chr7.1:28859209-28859228 | None:intergenic | 45.0% |
| !! | AAACAAGGGCATCAGCTGTA+AGG | + | chr7.1:28858218-28858237 | None:intergenic | 45.0% |
| AACTCATGACCTAGGGAACC+AGG | + | chr7.1:28858745-28858764 | None:intergenic | 50.0% | |
| ATATGGGCAGGTCCTCTTTC+AGG | - | chr7.1:28860398-28860417 | MS.gene87685:intron | 50.0% | |
| CAGGTCCTCTTTCAGGAGAT+AGG | - | chr7.1:28860405-28860424 | MS.gene87685:intron | 50.0% | |
| CATGTATCTTGAGCCCCGTT+TGG | - | chr7.1:28859745-28859764 | MS.gene87685:intron | 50.0% | |
| CCGAGCAAATACCAGTTTGC+CGG | + | chr7.1:28858016-28858035 | None:intergenic | 50.0% | |
| CCGGCAAACTGGTATTTGCT+CGG | - | chr7.1:28858013-28858032 | MS.gene87685:CDS | 50.0% | |
| GCTAATGCCCGAGTCATAAC+AGG | + | chr7.1:28859111-28859130 | None:intergenic | 50.0% | |
| GCTACCCTATCTCCTGAAAG+AGG | + | chr7.1:28860413-28860432 | None:intergenic | 50.0% | |
| TAGGATGGAAGGTGATGCTG+AGG | - | chr7.1:28860100-28860119 | MS.gene87685:intron | 50.0% | |
| TATGCTGAGCATGCAAGACC+TGG | - | chr7.1:28859498-28859517 | MS.gene87685:CDS | 50.0% | |
| TTGCAGGCTCCTCTTCTTCT+AGG | - | chr7.1:28859891-28859910 | MS.gene87685:intron | 50.0% | |
| ! | GCTGATGCCCTTGTTTCAAC+TGG | - | chr7.1:28858222-28858241 | MS.gene87685:intron | 50.0% |
| ACTCGGGCATTAGCGAAAGC+AGG | - | chr7.1:28859117-28859136 | MS.gene87685:intron | 55.0% | |
| CCAAGCAAGAGACCTTTGGG+AGG | - | chr7.1:28860520-28860539 | MS.gene87685:intron | 55.0% | |
| CCTCCCAAAGGTCTCTTGCT+TGG | + | chr7.1:28860523-28860542 | None:intergenic | 55.0% | |
| TACGCCAAGCGAATCTGTCG+TGG | + | chr7.1:28860066-28860085 | None:intergenic | 55.0% | |
| AGCATGCAAGACCTGGTGGC+TGG | - | chr7.1:28859505-28859524 | MS.gene87685:CDS | 60.0% | |
| GCAAGACCTGGTGGCTGGAA+TGG | - | chr7.1:28859510-28859529 | MS.gene87685:CDS | 60.0% | |
| GCTGAGCATGCAAGACCTGG+TGG | - | chr7.1:28859501-28859520 | MS.gene87685:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 28857361 | 28860763 | 28857361 | ID=MS.gene87685 |
| chr7.1 | mRNA | 28857361 | 28860763 | 28857361 | ID=MS.gene87685.t1;Parent=MS.gene87685 |
| chr7.1 | exon | 28860630 | 28860763 | 28860630 | ID=MS.gene87685.t1.exon1;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28860630 | 28860763 | 28860630 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28860101 | 28860159 | 28860101 | ID=MS.gene87685.t1.exon2;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28860101 | 28860159 | 28860101 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28859845 | 28859901 | 28859845 | ID=MS.gene87685.t1.exon3;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28859845 | 28859901 | 28859845 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28859699 | 28859733 | 28859699 | ID=MS.gene87685.t1.exon4;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28859699 | 28859733 | 28859699 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28859489 | 28859592 | 28859489 | ID=MS.gene87685.t1.exon5;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28859489 | 28859592 | 28859489 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28859332 | 28859407 | 28859332 | ID=MS.gene87685.t1.exon6;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28859332 | 28859407 | 28859332 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28859182 | 28859240 | 28859182 | ID=MS.gene87685.t1.exon7;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28859182 | 28859240 | 28859182 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858955 | 28859020 | 28858955 | ID=MS.gene87685.t1.exon8;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858955 | 28859020 | 28858955 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858789 | 28858872 | 28858789 | ID=MS.gene87685.t1.exon9;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858789 | 28858872 | 28858789 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858593 | 28858657 | 28858593 | ID=MS.gene87685.t1.exon10;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858593 | 28858657 | 28858593 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858401 | 28858483 | 28858401 | ID=MS.gene87685.t1.exon11;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858401 | 28858483 | 28858401 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858137 | 28858227 | 28858137 | ID=MS.gene87685.t1.exon12;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858137 | 28858227 | 28858137 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28858003 | 28858052 | 28858003 | ID=MS.gene87685.t1.exon13;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28858003 | 28858052 | 28858003 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28857583 | 28857726 | 28857583 | ID=MS.gene87685.t1.exon14;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28857583 | 28857726 | 28857583 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| chr7.1 | exon | 28857361 | 28857453 | 28857361 | ID=MS.gene87685.t1.exon15;Parent=MS.gene87685.t1 |
| chr7.1 | CDS | 28857361 | 28857453 | 28857361 | ID=cds.MS.gene87685.t1;Parent=MS.gene87685.t1 |
| Gene Sequence |
| Protein sequence |
